Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: excel
https://packages.ecosyste.ms/registries/pypi.org/packages/excel
This package name is reserved by Microsoft Corporation
2 versions
Latest release: over 1 year ago
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Papers Mentioning excel 2,995
10.7554/eLife.21052
Embryonic origin of adult stem cells required for tissue homeostasis and regenerationCited by: 66
Author(s): Erin L. Davies, Kai Y. Lei, Christopher Seidel, Amanda E Kroesen, Sean A. McKinney, Longhua Guo, Sofia Robb, E. J. Ross, Kirsten Gotting, Alejandro Sánchez Alvarado
Software Mentions: 4
Published: over 7 years ago
10.1186/s40168-017-0363-6
Pancreatic cyst fluid harbors a unique microbiomeCited by: 53
Author(s): Shan Li, Gwenny M. Fuhler, Nahush Bn, Tony Jose, Marco J. Bruno, Maikel P. Peppelenbosch, Sergey R. Konstantinov
Software Mentions: 4
Published: over 6 years ago
10.1128/mSystems.01048-20
Essential Amino Acid Enrichment and Positive Selection Highlight Endosymbiont's Role in a Global Virus-Vectoring PestCited by: 3
Author(s): Kaitlyn N. Myers, Daniel Conn, Amanda M. V. Brown
Software Mentions: 4
Published: about 3 years ago
10.1038/s41398-021-01309-7
Gut microbial taxa elevated by dietary sugar disrupt memory functionCited by: 42
Author(s): Emily E. Noble, C. Anders Olson, Elizabeth A. Davis, Linda Tsan, Yen‐Wei Chen, Ruth Schade, Clarissa Liu, Andrea N. Suarez, Roshonda B. Jones, Claire de La Serre, Xia Yang, Elaine Y. Hsiao, Scott E. Kanoski
Software Mentions: 4
Published: about 3 years ago
10.1186/s13012-020-00985-1
Proceedings from the 12th Annual Conference on the Science of Dissemination and ImplementationCited by: 2
Author(s):
Software Mentions: 4
Published: about 4 years ago
10.1186/1758-2946-4-28
Effects of multiple conformers per compound upon 3-D similarity search and bioassay data analysisCited by: 16
Author(s): Sunghwan Kim, Evan Bolton, Stephen H. Bryant
Software Mentions: 4
Published: over 11 years ago
10.1111/tpj.14454
Metabolic diversification of nitrogen‐containing metabolites by the expression of a heterologous lysine decarboxylase gene in ArabidopsisCited by: 10
Author(s): Y. Shimizu, Amit Rai, Yuko Okawa, Hajime Tomatsu, Masaru Satô, Kota Kera, Hideyuki Suzuki, Kazuki Saito, Mami Yamazaki
Software Mentions: 4
Published: over 4 years ago
10.1186/s12916-020-01726-3
COVID-19 length of hospital stay: a systematic review and data synthesisCited by: 385
Author(s): Eleanor M. Rees, Emily Nightingale, Yalda Jafari, Naomi R. Waterlow, Samuel Clifford, Carl A. B. Pearson, Thibaut Jombart, Simon R. Procter, Gwenan M. Knight
Software Mentions: 4
Published: over 3 years ago
10.3389/fimmu.2020.608895
Gentamicin Induced Microbiome Adaptations Associate With Increased BCAA Levels and Enhance Severity of Influenza InfectionCited by: 6
Author(s): Ye Sun, Zi He, Jiajia Li, Saisai Gong, Shunzong Yuan, Tao Li, Nianzhi Ning, Xing Li, Liangyan Zhang, Fanghong Chen, Li Zhan, Jianxin Wang, Di Luo, Hui Wang
Software Mentions: 4
Published: about 3 years ago
10.1186/s12913-020-05806-1
Limited predictive value of admission time in clinical psychiatryCited by: 0
Author(s): Peter Kreuzer, Stefan Günther, Jorge Simões, Michael Ziereis, Berthold Langguth
Software Mentions: 4
Published: over 3 years ago
10.1371/journal.pone.0185207
Escape Excel: A tool for preventing gene symbol and accession conversion errorsCited by: 8
Author(s): Eric A. Welsh, Paul A. Stewart, Brent M. Kuenzi, James A. Eschrich
Software Mentions: 4
Published: over 6 years ago
10.1186/s12864-017-4122-7
Chemosensory gene expression in olfactory organs of the anthropophilic Anopheles coluzzii and zoophilic Anopheles quadriannulatusCited by: 25
Author(s): Giridhar Athrey, Luciano V. Cosme, Zachary R. Popkin-Hall, Sharmila Pathikonda, Willem Takken, Michel A. Slotman
Software Mentions: 4
Published: over 6 years ago
10.1186/s12859-020-3402-4
proMAD: semiquantitative densitometric measurement of protein microarraysCited by: 1
Author(s): Anna Jaeschke, Hagen Eckert, Laura J. Bray
Software Mentions: 4
Published: about 4 years ago
10.1371/journal.pone.0236728
The prevalence of psychiatric symptoms before the diagnosis of Parkinson’s disease in a nationwide cohort: A comparison to patients with cerebral infarctionCited by: 9
Author(s): Szabolcs Szatmári, András Ajtay, Ferenc Oberfrank, Balázs Dobi, Dániel Bereczki
Software Mentions: 4
Published: almost 4 years ago
10.1186/1471-2105-14-S7-S14
Examples of sequence conservation analyses capture a subset of mouse long non-coding RNAs sharing homology with fish conserved genomic elementsCited by: 16
Author(s): Swaraj Basu, Ferenc Müller, Remo Sanges
Software Mentions: 4
Published: about 11 years ago
10.1186/1471-2105-5-130
Cited by: 92Author(s): Sook Jung, Christopher Jesudurai, Margaret Staton, Zhidian Du, Stephen P. Ficklin, Il-Hyung Cho, Albert G. Abbott, Jeffrey Tomkins, Dorrie Main
Software Mentions: 4
Published: over 20 years ago
10.1371/journal.pone.0093846
The SLE Transcriptome Exhibits Evidence of Chronic Endotoxin Exposure and Has Widespread Dysregulation of Non-Coding and Coding RNAsCited by: 104
Author(s): Lei Shi, Zhe Zhang, Angela M Yu, Wei Wang, Zhi Wei, Ehtisham Akhter, Kelly Maurer, Patrícia Costa-Reis, Li Song, Michelle Petri, Kathleen E. Sullivan
Software Mentions: 4
Published: about 10 years ago
10.1371/journal.pone.0141225
A catalogue of novel bovine long noncoding RNA across 18 tissuesCited by: 76
Author(s): Lambros T. Koufariotis, Yi‐Ping Phoebe Chen, Amanda J. Chamberlain, Christy Vander Jagt, Ben J. Hayes
Software Mentions: 4
Published: over 8 years ago
10.1371/journal.pgen.1008197
Novel protective and risk loci in hip dysplasia in German ShepherdsCited by: 8
Author(s): Lea Mikkola, Saila Holopainen, Anu K. Lappalainen, Tiina Pessa‐Morikawa, Thomas Pulikotial Augustine, Meharji Arumilli, Marjo K. Hytönen, Osmo Hakosalo, Hannes Lohi, Antti Iivanainen
Software Mentions: 4
Published: almost 5 years ago
10.1186/1471-2407-9-396
An informatics supported web-based data annotation and query tool to expedite translational research for head and neck malignanciesCited by: 12
Author(s): Waqas Amin, Hyunseok P. Kang, Ann Marie Egloff, Harpreet Singh, Kerry Trent, Jennifer Ridge-Hetrick, Raja R. Seethala, Jennifer R. Grandis, Anil V. Parwani
Software Mentions: 4
Published: over 14 years ago
10.1111/tpj.14795
The genetic and functional analysis of flavor in commercial tomato: the <i>FLORAL4</i> gene underlies a QTL for floral aroma volatiles in tomato fruitCited by: 30
Author(s): Yury Tikunov, Raana Roohanitaziani, Fien Meijer‐Dekens, Jos Molthoff, João Paulo, Richard Finkers, Iris Capel, Fátima Carvajal Moreno, Chris Maliepaard, Mariska Nijenhuis-de Vries, C.W. Labrie, W. Verkerke, A.W. van Heusden, Fred van Eeuwijk, R.G.F. Visser, Arnaud Bovy
Software Mentions: 4
Published: almost 4 years ago
10.3389/fmicb.2017.00548
Transcriptomic and Metabolomics Profiling of Phage–Host Interactions between Phage PaP1 and Pseudomonas aeruginosaCited by: 26
Author(s): Xia Zhao, Mengyu Shen, Xingyu Jiang, Wei Shen, Qian Zhong, Yuhui Yang, Yinling Tan, Melissa Agnello, Xuesong He, Fuquan Hu, Shuai Le
Software Mentions: 4
Published: about 7 years ago
10.1371/journal.pgen.1006879
Open chromatin profiling identifies AP1 as a transcriptional regulator in oesophageal adenocarcinomaCited by: 40
Author(s): Edward Britton, Connor Rogerson, Shaveta Mehta, Yaoyong Li, Xiaodun Li, Rebecca C. Fitzgerald, Yeng Ang, Andrew D Sharrocks
Software Mentions: 4
Published: over 6 years ago
10.1371/journal.pone.0034534
MicroRNA Dysregulation in the Spinal Cord following Traumatic InjuryCited by: 113
Author(s): Mónica Yunta, Manuel Nieto‐Díaz, Francisco J. Esteban, Marcos Caballero-López, Rosa Navarro-Ruíz, David Reigada, D. Wolfgang Pita-Thomas, Ángela del Águila, Teresa Muñoz‐Galdeano, Rodrigo M. Maza
Software Mentions: 4
Published: about 12 years ago
10.3390/ani10050784
The Effect of Age, Stage of the Annual Production Cycle and Pregnancy-Rank on the Relationship between Liveweight and Body Condition Score in Extensively Managed Romney EwesCited by: 7
Author(s): Jimmy Semakula, René A. Corner-Thomas, S. T. Morris, Hugh T. Blair, P. R. Kenyon
Software Mentions: 3
Published: about 4 years ago
10.1111/joa.12821
Pbx loss in cranial neural crest, unlike in epithelium, results in cleft palate only and a broader midfaceCited by: 19
Author(s): Ian Welsh, James Hart, Joel J. Brown, Karissa Hansen, Marcelo Rocha Marques, Robert Aho, Irina Grishina, Romulo Hurtado, Doris Herzlinger, Elisabetta Ferretti, María J. García-García, Licia Selleri
Software Mentions: 3
Published: almost 6 years ago
10.1186/s12870-021-02919-5
Superoxide dismutase (SOD) as a selection criterion for triticale grain yield under drought stress: a comprehensive study on genomics and expression profiling, bioinformatics, heritability, and phenotypic variabilityCited by: 39
Author(s): Armin Saed-Moucheshi, Fatemeh Sohrabi, Elham Fasihfar, Fatemeh Baniasadi, Mehrnaz Riasat, Ali-Akbar Mozafari
Software Mentions: 3
Published: about 3 years ago
10.1080/19490976.2021.1882926
Ethnic variability associating gut and oral microbiome with obesity in childrenCited by: 18
Author(s): Baskar Balakrishnan, Vaithinathan Selvaraju, Jun Chen, Priscilla Ayine, Lu Yang, Jeganathan Ramesh Babu, Thangiah Geetha, Veena Taneja
Software Mentions: 3
Published: over 3 years ago
10.1186/s12969-018-0265-6
Proceedings of the 25th European Paediatric Rheumatology Congress (PReS 2018)Cited by: 27
Author(s):
Software Mentions: 3
Published: almost 6 years ago
10.7717/peerj.603
GroopM: an automated tool for the recovery of population genomes from related metagenomesCited by: 228
Author(s): Michael Imelfort, Donovan H. Parks, Ben J. Woodcroft, Paul G. Dennis, Philip Hugenholtz, Gene W. Tyson
Software Mentions: 3
Published: over 9 years ago
10.1155/2017/1278932
Empirical Comparison of Visualization Tools for Larger-Scale Network AnalysisCited by: 39
Author(s): Georgios A. Pavlopoulos, David Páez-Espino, Nikos C. Kyrpides, Ioannis Iliopoulos
Software Mentions: 3
Published: almost 7 years ago
10.1186/s12936-018-2517-9
Screening and field performance of powder-formulated insecticides on eave tube inserts against pyrethroid resistant Anopheles gambiae s.l.: an investigation into ‘actives’ prior to a randomized controlled trial in Côte d’IvoireCited by: 9
Author(s): Welbeck A. Oumbouke, Innocent Z. Tia, Antoine M. G. Barreaux, Alphonsine A. Koffi, Eleanore D. Sternberg, Matthew B. Thomas, Raphaël N’Guessan
Software Mentions: 3
Published: over 5 years ago
10.1155/2018/6023457
Genome-Wide Identification, Classification, and Expression Divergence of Glutathione-Transferase Family in<i> Brassica rapa</i> under Multiple Hormone TreatmentsCited by: 18
Author(s): Nadeem Khan, Chunmei Hu, Waleed Amjad Khan, Xilin Hou
Software Mentions: 3
Published: over 6 years ago
10.1186/s12984-020-00788-x
Commercial head-mounted display virtual reality for upper extremity rehabilitation in chronic stroke: a single-case design studyCited by: 23
Author(s): Mattias Erhardsson, Margit Alt Murphy, Katharina S. Sunnerhagen
Software Mentions: 3
Published: over 3 years ago
10.1186/bcr3672
A genomic analysis of mouse models of breast cancer reveals molecular features ofmouse models and relationships to human breast cancerCited by: 71
Author(s): Daniel P. Hollern, Eran R. Andrechek
Software Mentions: 3
Published: almost 10 years ago
10.1042/BSR20193708
<i>In silico</i> approach to predict pancreatic β-cells classically secreted proteinsCited by: 1
Author(s): Erika Pinheiro-Machado, Tatiana Orli Milkewitz Sandberg, Celina Pihl, Per Hägglund, Michał Marzec
Software Mentions: 3
Published: over 4 years ago
10.3390/biom11081133
TCMacro: A Simple and Robust ImageJ-Based Method for Automated Measurement of Tail Coiling Activity in ZebrafishCited by: 2
Author(s): Kevin Adi Kurnia, Fiorency Santoso, Bonifasius Putera Sampurna, Gilbert Audira, Jong-Chin Huang, Kelvin H.‐C. Chen, Chung-Der Hsiao
Software Mentions: 3
Published: almost 3 years ago
10.3390/ijms21113746
Differential Secretome Profiling of Human Osteoarthritic Synoviocytes Treated with Biotechnological Unsulfated and Marine Sulfated ChondroitinsCited by: 15
Author(s): Rosita Russo, Valentina Vassallo, Antonietta Stellavato, Mariangela Valletta, Donatella Cimini, Paolo V. Pedone, Chiara Schiraldi, Angela Chambery
Software Mentions: 3
Published: almost 4 years ago
10.7554/eLife.63101
Investigation of Drosophila fruitless neurons that express Dpr/DIP cell adhesion moleculesCited by: 12
Author(s): Savannah G Brovero, Julia C Fortier, Hongru Hu, Pamela C Lovejoy, Nicole R. Newell, Colleen M Palmateer, Ruei-Ying Tzeng, Pei-Tseng Lee, Kai Zinn, Michelle N. Arbeitman
Software Mentions: 3
Published: about 3 years ago
10.3390/ijms22031167
Glutamine Uptake via SNAT6 and Caveolin Regulates Glutamine–Glutamate CycleCited by: 14
Author(s): Nikhil R. Gandasi, Vasiliki Arapi, Michel‐Edwar Mickael, Prajakta A. Belekar, Louise Granlund, Lakshmi Kothegala, Robert Fredriksson, Sonchita Bagchi
Software Mentions: 3
Published: over 3 years ago
10.3390/biology9090260
Computational and Transcriptome Analyses Revealed Preferential Induction of Chemotaxis and Lipid Synthesis by SARS-CoV-2Cited by: 7
Author(s): Hibah Shaath, Nehad M. Alajez
Software Mentions: 3
Published: over 3 years ago
10.6026/97320630013269
Potential Hemoglobin A/F role in clinical MalariaCited by: 1
Author(s): Vikky Awasthi, Debprasad Chattopadhyay, Jyoti Das
Software Mentions: 3
Published: over 6 years ago
10.7554/eLife.22037
Operon mRNAs are organized into ORF-centric structures that predict translation efficiencyCited by: 119
Author(s): David H Burkhardt, Silvi Rouskin, Yan Zhang, Gene-Wei Li, Jonathan S. Weissman, Carol A. Gross
Software Mentions: 3
Published: over 7 years ago
10.1155/2018/5206758
Evolution and Expression Divergence of E2 Gene Family under Multiple Abiotic and Phytohormones Stresses in<i>Brassica rapa</i>Cited by: 8
Author(s): Nadeem Khan, Chunmei Hu, Waleed Amjad Khan, Emal Naseri, Koeun Han, Hansong Dong, Xilin Hou
Software Mentions: 3
Published: over 5 years ago
10.7554/eLife.19466
Origin and evolution of transporter substrate specificity within the NPF familyCited by: 78
Author(s): Morten Jørgensen, Deyang Xu, Christoph Crocoll, Heidi A. Ernst, David Ramírez, Mohammed Saddik Motawia, Carl Erik Olsen, Osman Mirza, Hussam Hassan Nour-Eldin
Software Mentions: 3
Published: about 7 years ago
10.1186/1756-0500-5-52
Meta-analyses and Forest plots using a microsoft excel spreadsheet: step-by-step guide focusing on descriptive data analysisCited by: 545
Author(s): Jeruza Lavanholi Neyeloff, Sandra Cristina Pereira Costa Fuchs, Leila Beltrami Moreira
Software Mentions: 3
Published: over 12 years ago
10.1155/2021/2807236
Research on the Undulatory Motion Mechanism of Seahorse Based on Dynamic MeshCited by: 3
Author(s): Xinyu Quan, Ximing Zhao, Shijie Zhang, Jie Zhou, Nan Yu, Xuyan Hou
Software Mentions: 3
Published: over 2 years ago
10.1186/s13102-021-00318-9
Incidence, severity and perceived susceptibility of COVID-19 in the UK CrossFit populationCited by: 5
Author(s): Athalie Redwood‐Brown, Grant W. Ralston, Jennifer Wilson
Software Mentions: 3
Published: over 2 years ago
10.1186/s12885-015-1337-3
Transcriptional changes associated with resistance to inhibitors of epidermal growth factor receptor revealed using metaanalysisCited by: 3
Author(s): Sidra Younis, Qamar Javed, Miroslav Blumenberg
Software Mentions: 3
Published: about 9 years ago
10.3762/bjnano.8.101
Needs and challenges for assessing the environmental impacts of engineered nanomaterials (ENMs)Cited by: 34
Author(s): Michelle Romero-Franco, Hilary Godwin, Muhammad Bilal, Yoram Cohen
Software Mentions: 3
Published: about 7 years ago
10.1155/2018/5912194
Pyroptosis of MCF7 Cells Induced by the Secreted Factors of hUCMSCsCited by: 16
Author(s): Yang Jiao, Hang Zhao, Guodong Chen, Xiongbo Sang, Luhan Yang, Zhen Hou, Wei Si, Bingrong Zheng
Software Mentions: 3
Published: over 5 years ago
10.1515/jib-2018-0080
Gene Expression Studies to Identify Significant Genes in AR, MTOR, MAPK Pathways and their Overlapping Regulatory Role in Prostate CancerCited by: 0
Author(s): Nimisha Asati, Abhinav Mishra, Ayush Shukla, Tiratha Raj Singh
Software Mentions: 3
Published: almost 5 years ago
10.7554/eLife.64691
Disease-related mutations in PI3Kγ disrupt regulatory C-terminal dynamics and reveal a path to selective inhibitorsCited by: 23
Author(s): Manoj Kumar Rathinaswamy, Zied Gaieb, Kaelin D Fleming, Chiara Borsari, Noah J Harris, Brandon E Moeller, Matthias P. Wymann, Rommie E. Amaro, John E. Burke
Software Mentions: 3
Published: about 3 years ago
10.1107/S1600576716010906
Guinier peak analysis for visual and automated inspection of small-angle X-ray scattering dataCited by: 52
Author(s): Christopher D. Putnam
Software Mentions: 3
Published: almost 8 years ago
10.1186/s12882-020-01805-w
The gut microbiota profile of adults with kidney disease and kidney stones: a systematic review of the literatureCited by: 49
Author(s): Jordan Stanford, Karen E Charlton, Anita Stefoska‐Needham, Rukayat Ibrahim, Kelly Lambert
Software Mentions: 3
Published: almost 4 years ago
10.18632/aging.103272
Age-related cognitive decline in baboons: modeling the prodromal phase of Alzheimer's disease and related dementiasCited by: 8
Author(s): Stephanny Lizarraga, Etienne W. Daadi, Gourav Roy-Choudhury, Marcel M. Daadi
Software Mentions: 3
Published: about 4 years ago
10.1186/s12961-020-00601-0
Making change last? Exploring the value of sustainability approaches in healthcare: a scoping reviewCited by: 20
Author(s): Laura Lennox, A. Linwood-Amor, Lynne Maher, Julie Reed
Software Mentions: 3
Published: over 3 years ago
10.3389/fmicb.2020.579929
Population Genetic Analysis of the Theileria annulata Parasites Identified Limited Diversity and Multiplicity of Infection in the Vaccine From IndiaCited by: 12
Author(s): Sonti Roy, Vasundhra Bhandari, Madhumanti Barman, Pankaj Kumar, Vandna Bhanot, Jaspreet Singh Arora, Sanjeev Singh, Paresh Sharma
Software Mentions: 3
Published: over 3 years ago
10.1371/journal.pbio.3000134
Proximal recolonization by self-renewing microglia re-establishes microglial homeostasis in the adult mouse brainCited by: 102
Author(s): Lihong Zhan, Grietje Krabbe, Fei Du, Ian Jones, Meredith C. Reichert, Maria Telpoukhovskaia, Lay Kodama, Chao Wang, Seo-Hyun Cho, Faten A. Sayed, Yaqiao Li, David Le, Yungui Zhou, Yin Shen, Brian L. West, Li Gan
Software Mentions: 3
Published: over 5 years ago
10.1002/iid3.246
Flow Plex —A tool for unbiased comprehensive flow cytometry data analysisCited by: 0
Author(s): Johannes Nowatzky, Ezra Resnick, Julia Manasson, Cristy Stagnar, Arshed Al-Obeidi, Olivier Manches
Software Mentions: 3
Published: about 5 years ago
10.1186/s12885-019-5801-3
A new pragmatic design for dose escalation in phase 1 clinical trials using an adaptive continual reassessment methodCited by: 20
Author(s): Bernard V. North, Hemant M. Kocher, Peter Sasieni
Software Mentions: 3
Published: almost 5 years ago
10.1186/1471-2407-8-107
Two-dimensional electrophoretic comparison of metastatic and non-metastatic human breast tumors using in vitrocultured epithelial cells derived from the cancer tissuesCited by: 19
Author(s): Jan Vydra, Irena Selicharová, Kateřina Smutná, Miloslav Šanda, Eva Matoušková, Eva Buršíková, Markéta Prchalová, Z Velenská, David Coufal, Jiřı́ Jiráček
Software Mentions: 3
Published: about 16 years ago
10.3389/fmicb.2018.01074
Inorganic Nitrogen Application Affects Both Taxonomical and Predicted Functional Structure of Wheat Rhizosphere Bacterial CommunitiesCited by: 83
Author(s): Vanessa Nessner Kavamura, Rifat Hayat, Ian M. Clark, Maike Rossmann, Rodrigo Mendes, P. R. Hirsch, Tim H. Mauchline
Software Mentions: 3
Published: almost 6 years ago
10.3389/fmicb.2018.01926
Endophytic Bacterial Community Structure and Function of Herbaceous Plants From Petroleum Hydrocarbon Contaminated and Non-contaminated SitesCited by: 20
Author(s): Rhea Lumactud, Roberta R. Fulthorpe
Software Mentions: 3
Published: over 5 years ago
10.7554/eLife.17243
Human intracranial recordings link suppressed transients rather than 'filling-in' to perceptual continuity across blinksCited by: 40
Author(s): Tal Golan, Ido Davidesco, Meir Meshulam, David M. Groppe, Pierre Mégevand, Erin Yeagle, Matthew S Goldfinger, Michal Harel, Lucía Melloni, Charles E. Schroeder, Leon Y. Deouell, Ashesh D. Mehta, Rafael Malach
Software Mentions: 3
Published: over 7 years ago
10.1093/database/baaa103
Creating a Metabolic Syndrome Research Resource using the National Health and Nutrition Examination SurveyCited by: 2
Author(s): Willysha Jenkins, C Peter Richardson, Ariel Williams, ClarLynda R. Williams-DeVane
Software Mentions: 3
Published: over 4 years ago
10.1186/s12859-019-2624-9
Multispecies genome-wide analysis defines the MAP3K gene family in Gossypium hirsutum and reveals conserved family expansionsCited by: 4
Author(s): Norbert Bokros, S. Popescu, George V. Popescu
Software Mentions: 3
Published: about 5 years ago
10.15252/embr.201948375
Class I <scp>HDAC</scp> inhibitors enhance <scp>YB</scp> ‐1 acetylation and oxidative stress to block sarcoma metastasisCited by: 63
Author(s): Amal M. El-Naggar, Syam Prakash Somasekharan, Yemin Wang, Hongwei Cheng, Gian Luca Negri, Melvin Pan, Xue Q. Wang, Alberto Delaidelli, Bo Rafn, Jordan Cran, Fan Zhang, Haifeng Zhang, Shane Colborne, Martin Gleave, Anna Mandinova, Nancy Kedersha, Christopher S. Hughes, Didier Surdez, Olivier Delattre, Yuzhuo Wang, David G. Huntsman, Gregg B. Morin, Poul H. Sorensen
Software Mentions: 3
Published: over 4 years ago
10.1186/1471-2105-12-13
A Platform for Processing Expression of Short Time Series (PESTS)Cited by: 16
Author(s): Ayan Sinha, Marianthi Markatou
Software Mentions: 3
Published: over 13 years ago
10.1016/j.dib.2020.105736
Dataset for supporting a modular autoinduction device for control of gene expression in Bacillus subtilisCited by: 3
Author(s): Graciely Gomes Corrêa, Milca Rachel da Costa Ribeiro Lins, Bruna Fernandes Silva, Gabriela Barbosa de Paiva, Vitória Fernanda Bertolazzi Zocca, Nathan Vinícius Ribeiro, Flávio Pereira Picheli, Matthias Mack, Danielle Biscaro Pedrolli
Software Mentions: 3
Published: almost 4 years ago
10.1186/s12940-017-0265-x
Comparison of methods for calculating the health costs of endocrine disrupters: a case study on triclosanCited by: 1
Author(s): Radka Přichystalová, Jean-Baptiste Fini, Leonardo Trasande, Martine Bellanger, Barbara Demeneix, Laura Maxim
Software Mentions: 3
Published: almost 7 years ago
10.1371/journal.pone.0067129
Preliminary Assessment of Microbiome Changes Following Blood-Feeding and Survivorship in the Amblyomma americanum Nymph-to-Adult Transition using Semiconductor SequencingCited by: 72
Author(s): Arturo C. Menchaca, David K. Visi, Otto F. Strey, Pete D. Teel, Kevin Kalinowski, Michael S. Allen, Phillip Williamson
Software Mentions: 3
Published: almost 11 years ago
10.1371/journal.pone.0248687
Lost to follow-up and associated factors among patients with drug resistant tuberculosis in Ethiopia: A systematic review and meta-analysisCited by: 8
Author(s): Assefa Andargie, Asressie Molla Tessema, Fentaw Tadese, Segenet Zewdie
Software Mentions: 3
Published: about 3 years ago
10.1371/journal.pone.0253615
Electronic patient-reported outcome measures using mobile health technology in rheumatology: A scoping reviewCited by: 8
Author(s): Jaclyn Shelton, Sierra Casey, Nathan Puhl, Jeanette Buckingham, Elaine Yacyshyn
Software Mentions: 3
Published: almost 3 years ago
10.1371/journal.pone.0254426
Constitutive activation of NF-κB inducing kinase (NIK) in the mesenchymal lineage using Osterix (Sp7)- or Fibroblast-specific protein 1 (S100a4)-Cre drives spontaneous soft tissue sarcomaCited by: 2
Author(s): Jennifer L. Davis, Roman Thaler, Linda Cox, Biancamaria Ricci, Heather M. Zannit, Fei Wan, Roberta Faccio, Amel Dudakovic, André J. van Wijnen, Deborah J. Veis
Software Mentions: 3
Published: almost 3 years ago
10.1371/journal.pone.0234955
Estimating the prevalence and risk of COVID-19 among international travelers and evacuees of Wuhan through modeling and case reportsCited by: 20
Author(s): George Luo, Michael L. McHenry, John J. Letterio
Software Mentions: 3
Published: almost 4 years ago
10.1186/s13054-018-1973-5
38th International Symposium on Intensive Care and Emergency MedicineCited by: 17
Author(s):
Software Mentions: 3
Published: about 6 years ago
10.1186/s13072-019-0276-7
Ovarian dysfunction following prenatal exposure to an insecticide, chlordecone, associates with altered epigenetic featuresCited by: 16
Author(s): Louis Legoff, Ouzna Dali, Shereen Cynthia D’Cruz, Antonio Suglia, Aurore Gély-Pernot, Chloé Hémery, Pierre-Yves Kernanec, Abbassia Demmouche, Christine Kervarrec, Sergei G. Tevosian, Luc Multigner, Fátima Smagulova
Software Mentions: 3
Published: about 5 years ago
10.1371/journal.pone.0251691
Implementation of GeneXpert MTB/Rif proficiency testing program: A Case of the Uganda national tuberculosis reference laboratory/supranational reference laboratoryCited by: 5
Author(s): Joel Kabugo, Joanita Namutebi, Dennis Mujuni, Andrew Nsawotebba, George William Kasule, Kenneth Musisi, Edgar Kigozi, Nyombi Abdunoor, Pius Lutaaya, Fredrick Kangave, Moses Joloba
Software Mentions: 3
Published: about 3 years ago
10.1371/journal.pone.0114406
An Integrated Approach for Platoon-based Simulation and Its Feasibility AssessmentCited by: 7
Author(s): Kok Mun Ng, Mamun Bin Ibne Reaz
Software Mentions: 3
Published: about 9 years ago
10.1186/1471-2164-12-593
A co-ordinated interaction between CTCF and ER in breast cancer cellsCited by: 56
Author(s): Caryn S. Ross-Innes, Gordon D. Brown, Jason S. Carroll
Software Mentions: 3
Published: over 12 years ago
10.1186/s12859-016-1139-x
CerealsDB 3.0: expansion of resources and data integrationCited by: 38
Author(s): Paul Wilkinson, Mark Winfield, Gary Barker, Simon Tyrrell, Xingdong Bian, Alexandra M. Allen, Amanda Burridge, Jane A. Coghill, Christy Waterfall, Mario Cáccamo, Robert P. Davey, Keith J. Edwards
Software Mentions: 3
Published: almost 8 years ago
10.1371/journal.pone.0161907
Cerebral Autoregulation Real-Time MonitoringCited by: 8
Author(s): Adi Tsalach, Eliahu Ratner, Stas Lokshin, Zmira Silman, Ilan Breskin, Nahum Budin, Moshe Kamar
Software Mentions: 3
Published: over 7 years ago
10.1186/s12859-015-0860-1
Treelink: data integration, clustering and visualization of phylogenetic treesCited by: 9
Author(s): Christian Allende, Erik Sohn, Cedric Little
Software Mentions: 3
Published: over 8 years ago
10.1371/journal.pone.0245023
Effect of high-intensity interval training on metabolic parameters in women with polycystic ovary syndrome: A systematic review and meta-analysis of randomized controlled trialsCited by: 15
Author(s): Ivanaldo Santos, Fernando Antônio Santana de Souza Nunes, Victor Sabino de Queiros, Ricardo Ney Cobucci, Pedro Brüch Dantas, Gustavo Mafaldo Soares, Breno Guilherme de Araújo Tinôco Cabral, Técia Maria de Oliveira Maranhão, Paulo Moreira Silva Dantas
Software Mentions: 3
Published: over 3 years ago
10.1371/journal.pone.0159177
Immunophenotypic and Ultrastructural Analysis of Mast Cells in Hermansky-Pudlak Syndrome Type-1: A Possible Connection to Pulmonary FibrosisCited by: 11
Author(s): Arnold S. Kirshenbaum, Glenn Cruse, Avanti Desai, Geethani Bandara, Maarten Leerkes, Chyi‐Chia Richard Lee, Elizabeth R. Fischer, Kevin O’Brien, Bernadette R. Gochuico, Kelly D. Stone, William A. Gahl, Dean D. Metcalfe
Software Mentions: 3
Published: almost 8 years ago
10.1186/s12913-020-05929-5
Change and improvement 50 years in the making: a scoping review of the use of soft systems methodology in healthcareCited by: 9
Author(s): Hanna Augustsson, Kate Churruca, Jeffrey Braithwaite
Software Mentions: 3
Published: over 3 years ago
10.1371/journal.pone.0125964
Genome-Wide Distribution, Organisation and Functional Characterization of Disease Resistance and Defence Response Genes across Rice SpeciesCited by: 34
Author(s): S. P. Singh, Suresh Chand, Nagendra Singh, Tilak Raj Sharma
Software Mentions: 3
Published: about 9 years ago
10.1371/journal.pntd.0003372
An Updated Insight into the Sialotranscriptome of Triatoma infestans: Developmental Stage and Geographic VariationsCited by: 35
Author(s): Alexandra Schwarz, Nora Medrano-Mercado, Günter A. Schaub, Cláudio J. Struchiner, M. D. Bargues, Michael Z. Levy, José M. C. Ribeiro
Software Mentions: 3
Published: over 9 years ago
10.1371/journal.pone.0249877
Comprehensive approach to HIV/AIDS testing and linkage to treatment among men who have sex with men in Curitiba, BrazilCited by: 2
Author(s): Marly Marques da Cruz, Vanda Lúcia Cota, Nena Lentini, Trista Bingham, Gregory Parent, Solange Kanso, Liza Regina Bueno Rosso, Bernardo Machado De Almeida, Raquel Maria Cardoso Torres, Cristiane Yumi Nakamura, Ana Carolina Faria e Silva Santelli
Software Mentions: 3
Published: about 3 years ago
10.1186/s12864-019-6332-7
SMaSH: Sample matching using SNPs in humansCited by: 7
Author(s): Maximillian S. Westphal, David Frankhouser, Carmine M. Sonzone, Peter G. Shields, Pearlly S. Yan, Ralf Bundschuh
Software Mentions: 3
Published: over 4 years ago
10.1186/s12865-019-0294-z
Immunoglobulin G responses against falciparum malaria specific antigens are higher in children with homozygous sickle cell trait than those with normal hemoglobinCited by: 4
Author(s): George M. Bwire, Mtebe Majigo, Robert Makalla, Lillian Nkinda, Akili Mawazo, Mucho Mizinduko, Julie Makani
Software Mentions: 3
Published: about 5 years ago
10.1186/s12864-015-2215-8
Transcriptomes of post-mitotic neurons identify the usage of alternative pathways during adult and embryonic neuronal differentiationCited by: 13
Author(s): Alexandra Tallafuß, Meghan W. Kelly, Dan Gibson, Peter Batzel, Kate V. Karfilis, Jonathan A. Eisen, Kryn Stankunas, John H. Postlethwait, Philip Washbourne
Software Mentions: 3
Published: over 8 years ago
10.1371/journal.pone.0145653
Combining Synthetic Human Odours and Low-Cost Electrocuting Grids to Attract and Kill Outdoor-Biting Mosquitoes: Field and Semi-Field Evaluation of an Improved Mosquito Landing BoxCited by: 17
Author(s): Nancy S. Matowo, Lizette L. Koekemoer, Sarah Moore, Arnold S. Mmbando, Salum A. Mapua, Maureen Coetzee, Fredros O. Okumu
Software Mentions: 3
Published: over 8 years ago
10.3897/BDJ.3.e4078
PASSIFOR: A reference library of DNA barcodes for French saproxylic beetles (Insecta, Coleoptera)Cited by: 19
Author(s): Rodolphe Rougerie, Carlos Lopez‐Vaamonde, Thomas Barnouin, Julien Delnatte, Nicolas Moulin, Thierry Noblecourt, Benoît Nusillard, Guilhem Parmain, Fabien Soldati, Christophe Bouget
Software Mentions: 3
Published: about 9 years ago
10.1186/s12875-016-0538-4
Using program evaluation to support knowledge translation in an interprofessional primary care team: a case studyCited by: 6
Author(s): Catherine Donnelly, Lyn M. Shulha, Don A. Klinger, Lori Letts
Software Mentions: 3
Published: over 7 years ago
10.1186/1471-2164-13-453
Microarray analysis revealing common and distinct functions of promyelocytic leukemia protein (PML) and tumor necrosis factor alpha (TNFα) signaling in endothelial cellsCited by: 21
Author(s): Xiangguo Cheng, Hung‐Ying Kao
Software Mentions: 3
Published: over 12 years ago
10.1371/journal.pgen.1009687
Reduction of Derlin activity suppresses Notch-dependent tumours in the C. elegans germ lineCited by: 2
Author(s): Ramya Singh, Ryan B Smit, Xin Wang, Chris Wang, Hilary Racher, Dave Hansen
Software Mentions: 3
Published: over 2 years ago
10.1371/journal.pone.0204395
Decomposition of Ethiopian life expectancy by age and cause of mortality; 1990-2015Cited by: 12
Author(s): Jembere Gizachew Balew, Youngtae Cho, Myunggu Jung
Software Mentions: 3
Published: over 5 years ago
10.1371/journal.pone.0040059
Exposure of Soil Microbial Communities to Chromium and Arsenic Alters Their Diversity and StructureCited by: 223
Author(s): Cody S. Sheik, Tyler W. Mitchell, Fariha Zakria Rizvi, Yasir Rehman, Muhammad Faisal, Shahida Hasnain, Michael J. McInerney, Lee R. Krumholz
Software Mentions: 3
Published: almost 12 years ago