Projects: pypi: cellxgene
https://packages.ecosyste.ms/registries/pypi.org/packages/cellxgene
Web application for exploration of large scale scRNA-seq datasets
40 versions
Latest release: about 3 years ago
1 dependent package
862 downloads last month
Enhanced Analysis
Educational Contributors:
martin.prete@sanger.ac.uk
sidneymb@uw.edu
Repository Activity:
Repository Owner:
Chan Zuckerberg Initiative (organization)
Finding new ways to leverage technology, community-driven solutions, and collaboration to accelerate progress in science and education. Academic
Finding new ways to leverage technology, community-driven solutions, and collaboration to accelerate progress in science and education. Academic
Science Score: 100/100
Starting Score: 100 points
Bonuses:
-
+40
Educational commit emails
2 contributors with educational email addresses -
+20
Academic repository owner
Repository owned by academic institution -
+15
Institutional repository owner
Repository owned by research institution
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem -
-10
No science terms in description
No scientific terms found in description -
-25
Non-science indicators
1 non-scientific terms found
Very Likely Science (100)
Papers Mentioning cellxgene 4
10.1093/gigascience/giaa102
A single-cell RNA-sequencing training and analysis suite using the Galaxy frameworkCited by: 15
Author(s): Mehmet Tekman, Bérénice Batut, Alexander Ostrovsky, Christophe Antoniewski, D. L. Clements, Fidel Ramírez, Graham Etherington, Hans-Rudolf Hotz, Jelle Scholtalbers, Jonathan Manning, Léa Bellenger, Maria A. Doyle, Mohammad Heydarian, Ni Huang, Nicola Soranzo, Pablo Moreno, Stefan Mautner, Irene Papatheodorou, Anton Nekrutenko, James Taylor, Daniel Blankenberg, Rolf Backofen, Björn Grüning
Software Mentions: 12
Published: over 5 years ago
10.1186/s13059-021-02452-6
Sfaira accelerates data and model reuse in single cell genomicsCited by: 16
Author(s): David Fischer, Leander Dony, Martin König, Abdul Moeed, Luke Zappia, Lukas Heumos, Sophie Tritschler, Olle Holmberg, Hananeh Aliee, Fabian J. Theis
Software Mentions: 5
Published: almost 5 years ago
10.1073/pnas.2111315118
Profound Treg perturbations correlate with COVID-19 severityCited by: 92
Author(s): Silvia Galván-Peña, Juliette Léon, Kaitavjeet Chowdhary, Daniel A Michelson, Brinda Vijaykumar, Liang Yang, Angela M. Magnuson, Felicia Chen, Zachary Manickas-Hill, Alicja Piechocka-Trocha, Daniel Worrall, Kathryn Hall, Musie Ghebremichael, Bruce D. Walker, Jonathan Z. Li, Xu G. Yu, Diane Mathis, Christophe Benoist
Software Mentions: 2
Published: almost 5 years ago
10.1126/sciadv.abg6497
Interleukin-11 signaling promotes cellular reprogramming and limits fibrotic scarring during tissue regenerationCited by: 22
Author(s): Srinivas Allanki, Boris Strilić, Lilly Scheinberger, Y. L. Onderwater, Alora Marks, Stefan Günther, Jens Preussner, Khrievono Kikhi, Mario Looso, Didier Y.R. Stainier, Sven Reischauer
Software Mentions: 2
Published: almost 5 years ago