Projects: pypi: cellSNP
https://packages.ecosyste.ms/registries/pypi.org/packages/cellSNP
cellSNP - Analysis of expressed alleles in single cells
14 versions
Latest release: almost 6 years ago
49 downloads last month
Enhanced Analysis
Repository Activity:
Repository Owner:
single-cell-genetics (organization)
Science Score: 90/100
Starting Score: 100 points
Bonuses:
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem
Very Likely Science (90)
Papers Mentioning cellSNP 3
10.1093/gigascience/giab062
Genetic demultiplexing of pooled single-cell RNA-sequencing samples in cancer facilitates effective experimental designCited by: 16
Author(s): Lukas M. Weber, Ariel A. Hippen, Peter Hickey, Kristofer C. Berrett, Jason Gertz, Jennifer A. Doherty, Casey S. Greene, Stephanie C. Hicks
Software Mentions: 8
Published: almost 5 years ago
10.1016/j.stem.2020.07.019
Naive Pluripotent Stem Cells Exhibit Phenotypic Variability that Is Driven by Genetic VariationCited by: 36
Author(s): Daniel Ortmann, Stephanie Brown, Anne Czechanski, Selcan Aydin, Daniele Muraro, Yuanhua Huang, Rute Tomaz, Anna Osnato, Giovanni Canu, Brandon T Wesley, Daniel A. Skelly, Oliver Stegle, Tae-Young Choi, Gary A. Churchill, Christopher L. Baker, Peter J. Rugg‐Gunn, Steven C. Munger, Laura G. Reinholdt, Ludovic Vallier
Software Mentions: 4
Published: almost 6 years ago
10.1186/s13059-019-1865-2
Vireo: Bayesian demultiplexing of pooled single-cell RNA-seq data without genotype referenceCited by: 130
Author(s): Yuanhua Huang, Davis J. McCarthy, Oliver Stegle
Software Mentions: 2
Published: over 6 years ago