Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: cellSNP

https://packages.ecosyste.ms/registries/pypi.org/packages/cellSNP

cellSNP - Analysis of expressed alleles in single cells
14 versions
Latest release: over 4 years ago
49 downloads last month

Papers Mentioning cellSNP 3

10.1093/gigascience/giab062
Genetic demultiplexing of pooled single-cell RNA-sequencing samples in cancer facilitates effective experimental design
Cited by: 16
Author(s): Lukas M. Weber, Ariel A. Hippen, Peter Hickey, Kristofer C. Berrett, Jason Gertz, Jennifer A. Doherty, Casey S. Greene, Stephanie C. Hicks
Software Mentions: 8
Published: about 3 years ago
10.1016/j.stem.2020.07.019
Naive Pluripotent Stem Cells Exhibit Phenotypic Variability that Is Driven by Genetic Variation
Cited by: 36
Author(s): Daniel Ortmann, Stephanie Brown, Anne Czechanski, Selcan Aydin, Daniele Muraro, Yuanhua Huang, Rute Tomaz, Anna Osnato, Giovanni Canu, Brandon T Wesley, Daniel A. Skelly, Oliver Stegle, Tae-Young Choi, Gary A. Churchill, Christopher L. Baker, Peter J. Rugg‐Gunn, Steven C. Munger, Laura G. Reinholdt, Ludovic Vallier
Software Mentions: 4
Published: about 4 years ago
10.1186/s13059-019-1865-2
Vireo: Bayesian demultiplexing of pooled single-cell RNA-seq data without genotype reference
Cited by: 130
Author(s): Yuanhua Huang, Davis J. McCarthy, Oliver Stegle
Software Mentions: 2
Published: almost 5 years ago