Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: casava

https://packages.ecosyste.ms/registries/pypi.org/packages/casava

casava: a csv reader thingy
2 versions
Latest release: over 8 years ago
9 downloads last month

Papers Mentioning casava 13

NG6: Integrated next generation sequencing storage and processing environment
Cited by: 54
Author(s): Jérôme Mariette, Frédéric Escudié, Nicolas Allias, Gérald Salin, Céline Noirot, Sylvain Thomas, Christophe Klopp
Software Mentions: 10
Published: almost 13 years ago

10.1111/1365-2656.13065

Host genetics and geography influence microbiome composition in the sponge Ircinia campana
Cited by: 48
Author(s): Sarah M. Griffiths, Rachael E. Antwis, Luca Lenzi, Anita Lucaci, Donald C. Behringer, Mark J. Butler, Richard F. Preziosi
Software Mentions: 8
Published: about 5 years ago

10.1534/g3.116.027045

Differential Expression of Genes Involved in Host Recognition, Attachment, and Degradation in the Mycoparasite Tolypocladium ophioglossoides
Cited by: 20
Author(s): C. Alisha Quandt, Yanming Di, Justin Elser, Pankaj Jaiswal, Joseph W. Spatafora
Software Mentions: 6
Published: over 8 years ago

10.1002/1878-0261.12655

Transcriptome profiling of Ewing sarcomas – treatment resistance pathways and IGF‐dependency
Cited by: 6
Author(s): Yi Chen, Asle Charles Hesla, Yingbo Lin, Mehran Ghaderi, Mingzhi Liu, Yang Chen, Yifan Zhang, Panagiotis Tsagozis, Olle Larsson, Felix Haglund
Software Mentions: 5
Published: over 4 years ago

10.18632/oncotarget.16244

Systematic functional perturbations uncover a prognostic genetic network driving human breast cancer
Cited by: 27
Author(s): Tristan Gallenne, Kenneth N. Ross, Nils L. Visser, Salony, Christophe Desmet, Ben S. Wittner, Lodewyk Wessels, Sridhar Ramaswamy, Daniel S. Peeper
Software Mentions: 3
Published: over 7 years ago

10.1099/mic.0.000097

Chlamydia psittaci comparative genomics reveals intraspecies variations in the putative outer membrane and type III secretion system genes
Cited by: 24
Author(s): Bernard J. Wolff, Shatavia S. Morrison, Denise Pesti, Satishkumar Ranganathan Ganakammal, Ganesh Srinivasamoorthy, Shankar Changayil, M. Ryan Weil, Duncan MacCannell, Lori A. Rowe, Michael Frace, Branson W. Ritchie, Deborah Dean, Jonas M. Winchell
Software Mentions: 3
Published: over 9 years ago

10.1371/journal.pone.0214703

Characterization of genes and alleles involved in the control of flowering time in grapevine
Cited by: 7
Author(s): Nadia Kamal, Iris Ochßner, Anna Schwandner, Prisca Viehöver, Ludger Hausmann, Reinhard Töpfer, Bernd Weißhaar, Daniela Holtgräwe
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0122011

The Transcriptome of Equine Peripheral Blood Mononuclear Cells
Cited by: 17
Author(s): Alicja Pacholewska, Michaela Drögemüller, Jolanta Klukowska‐Rötzler, Simone Lanz, Eman Hamza, Emmanouil T. Dermitzakis, Eliane Marti, V. Gerber, Tosso Leeb, Vidhya Jagannathan
Software Mentions: 3
Published: over 9 years ago

10.1111/jne.12851

Transcription factor Creb3l1 regulates the synthesis of prohormone convertase enzyme PC1/3 in endocrine cells
Cited by: 13
Author(s): Michael Greenwood, Alex Paterson, Parveen Akhter Rahman, Benjamin Gillard, Sydney Langley, Yoshinobu Iwasaki, David Murphy
Software Mentions: 3
Published: over 4 years ago

10.1099/mgen.0.000257

LiSEQ – whole-genome sequencing of a cross-sectional survey of Listeria monocytogenes in ready-to-eat foods and human clinical cases in Europe
Cited by: 60
Author(s): Anaïs Painset, Jonas T. Björkman, Kristoffer Kiil, Laurent Guillier, Jean-François Mariet, Benjamin Félix, Corinne Amar, Ovidiu Rotariu, Sophie Roussel, Francisco J. Pérez‐Reche, Sylvain Brisse, Alexandra Moura, Marc Lecuit, Ken J. Forbes, Norval James Colin Strachan, Kathie Grant, Eva Møller Nielsen, Timothy J. Dallman
Software Mentions: 2
Published: almost 6 years ago

10.1002/1878-0261.12068

Gain-of-function p53 activates multiple signaling pathways to induce oncogenicity in lung cancer cells
Cited by: 13
Author(s): Catherine Vaughan, S. K. Singh, Steven R. Grossman, Brad E. Windle, Sumitra Deb, Sumitra Deb
Software Mentions: 2
Published: over 7 years ago

10.1590/1678-4685-GMB-2018-0051

Whole exome sequencing identifies a novel variant in an apoptosis-inducing factor gene associated with X-linked recessive hearing loss in a Chinese family
Cited by: 3
Author(s): Qi Wang, Xia Lu, Zhiwei Ding, Yu Qi, Yuhe Liu
Software Mentions: 1
Published: about 5 years ago

10.1111/1751-7915.12156

Whole genome and transcriptome analyses of environmental antibiotic sensitive and multi‐resistant <scp> P </scp> seudomonas aeruginosa isolates exposed to waste water and tap water
Cited by: 19
Author(s): Thomas Schwartz, Olivier Armant, Nancy Bretschneider, Alexander Hahn, Silke Kirchen, Martin Seifert, Andreas Dötsch
Software Mentions: 1
Published: about 10 years ago