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10.1016/j.ygeno.2009.10.004

Genome-wide end-sequenced BAC resources for the NOD/MrkTac☆ and NOD/ShiLtJ☆☆ mouse genomes
Cited by: 15
Author(s): Charles A. Steward, Sean Humphray, Bob Plumb, Matthew C. Jones, Michael A. Quail, Stephen V. Rice, Tony Cox, Robert M. Davies, James K. Bonfield, Thomas M. Keane, Michael Nefedov, Pieter J. de Jong, Paul Lyons, Linda S. Wicker, John A. Todd, Yoshihide Hayashizaki, Omid M. Gulban, Jayne S. Danska, Jennifer Harrow, Tim Hubbard, Jane Rogers, David J. Adams
Software Mentions: 1
Published: over 16 years ago

10.1016/j.gpb.2019.03.006

Tung Tree (Vernicia fordii) Genome Provides A Resource for Understanding Genome Evolution and Improved Oil Production
Cited by: 34
Author(s): Lin Zhang, Meilan Liu, Hongxu Long, Wei Dong, Asher Pasha, Eddi Esteban, Wenying Li, Xiaoming Yang, Ze Li, Aixia Song, Duo Ran, Guang Zhao, Yanwei Zeng, Hao Chen, Ming Zou, Jingjing Li, Fan Liang, Meili Xie, Jiang Hu, Depeng Wang, Heping Cao, Nicholas J. Provart, Liangsheng Zhang
Software Mentions: 1
Published: almost 7 years ago

10.1186/2047-217X-3-13

Annotated features of domestic cat – Felis catus genome
Cited by: 30
Author(s): Gaik Tamazian, Serguei Simonov, Pavel Dobrynin, Alex Makunin, Anton Logachev, Aleksey Komissarov, Andrey Shevchenko, Vladimir Brukhin, Nikolay Cherkasov, Anton Svitin, Klaus‐Peter Koepfli, Joan Pontius, Carlos A. Driscoll, Kevin Blackistone, Cristina Barr, David Goldman, Agostinho Antunes, Javier Quilez, Belén Lorente-Galdós, Can Alkan, Tomàs Marquès‐Bonet, Marylin Menotti-Raymond, Victor A. David, Kristina Narfström, Stephen J. O’Brien
Software Mentions: 1
Published: about 12 years ago

10.1093/gigascience/gix085

De novo PacBio long-read and phased avian genome assemblies correct and add to reference genes generated with intermediate and short reads
Cited by: 150
Author(s): Jonas Korlach, Gregory Gedman, Sarah B. Kingan, Chen-Shan Chin, Jason T. Howard, Josée Audet, Lindsey J. Cantin, Erich D. Jarvis
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-18378-8

Multiple losses of photosynthesis and convergent reductive genome evolution in the colourless green algae Prototheca
Cited by: 27
Author(s): Shigekatsu Suzuki, Rikiya Endoh, Ri-ichiroh Manabe, Moriya Ohkuma, Yoshihisa Hirakawa
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-19744-w

Aminode: Identification of Evolutionary Constraints in the Human Proteome
Cited by: 31
Author(s): K. T. Chang, Junyan Guo, Alberto di Ronza, Marco Sardiello
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-20004-0

Depletion of HDAC1, 7 and 8 by Histone Deacetylase Inhibition Confers Elimination of Pancreatic Cancer Stem Cells in Combination with Gemcitabine
Cited by: 57
Author(s): Mao-Hua Cai, Xiaogang Xu, Shili Yan, Ze Sun, Ying Yin, Baikui Wang, Yuexing Tu
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-19201-8

Loss-of-function uORF mutations in human malignancies
Cited by: 42
Author(s): Julia Schulz, Nancy Mah, Martin Neuenschwander, Tabea Kischka, Richard Ratei, Peter M. Schlag, Esmeralda Castaños‐Vélez, Iduna Fichtner, Per‐Ulf Tunn, Carsten Denkert, Oliver Klaas, Wolfgang E. Berdel, Jens Peter von Kries, Wojciech Makałowski, Miguel A. Andrade‐Navarro, Achim Leutz, Klaus Wethmar
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-20781-8

Accelerated invagination of vacuoles as a stress response in chronically heat-stressed yeasts
Cited by: 13
Author(s): Ayane Ishii, Masahito Kawai, Haruka Noda, Hiroyuki Kato, Kohei Takeda, K. Asakawa, Yoshinobu Ichikawa, Tomohiro Sasanami, Keiji Tanaka, Yoko Kimura
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-21330-z

A heading date QTL, qHD7.2, from wild rice (Oryza rufipogon) delays flowering and shortens panicle length under long-day conditions
Cited by: 23
Author(s): Jing Li, Rui Xu, Chunchao Wang, Qi Liu, Xiaoming Zheng, Wensheng Wang, Ye Ding, Lizhen Zhang, Yanyan Wang, Yunlian Cheng, Lifang Zhang, Weihua Qiao, Qing Yang
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-22010-8

Egr2-dependent microRNA-138 is dispensable for peripheral nerve myelination
Cited by: 11
Author(s): Hsin Pin Lin, Idil Oksuz, John Svaren, Rajeshwar Awatramani
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-23289-3

The transcriptional profiles and functional implications of long non-coding RNAs in the unfolded protein response
Cited by: 9
Author(s): Hongyang Quan, Qianqian Fan, Chuang Li, Yanying Wang, Lin Wang
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-25001-x

Application of droplet digital PCR in the analysis of genome integration and organization of the transgene in BAC transgenic mice
Cited by: 2
Author(s): Ayumi Nakagaki, Asuka Urakawa, Shiori Hirano, Takeru Anami, Tatsuya Kishino
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-25290-2

Bidirectional regulation of bone formation by exogenous and osteosarcoma-derived Sema3A
Cited by: 6
Author(s): Daniëlle de Ridder, Silvia Marino, Ryan T. Bishop, Nathalie Renema, Chantal Chenu, Dominique Heymann, Aymen I. Idris
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-27104-x

Blocking the 5′ splice site of exon 4 by a morpholino oligomer triggers APOL1 protein isoform switch
Cited by: 9
Author(s): Amber M. Cheatham, Shamara E. Davis, Atanu K. Khatua, Waldemar Popik
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-27360-x

Male mice with large inversions or deletions of X-chromosome palindrome arms are fertile and express their associated genes during post-meiosis
Cited by: 9
Author(s): Alyssa N. Kruger, Quinn Ellison, Michele Brogley, Emma R. Gerlinger, Jacob L. Mueller
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-018-30238-7

Identification and characterization of TP53 gene Allele Dropout in Li-Fraumeni syndrome and Oral cancer cohorts
Cited by: 5
Author(s): Mohammed Moquitul Haque, Pradnya Kowtal, Rajiv Sarin
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-018-31968-4

Investigation of hindbrain activity during active locomotion reveals inhibitory neurons involved in sensorimotor processing
Cited by: 24
Author(s): Kristen E. Severi, Urs Lucas Böhm, Claire Wyart
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-31785-9

The acetylation of cyclin-dependent kinase 5 at lysine 33 regulates kinase activity and neurite length in hippocampal neurons
Cited by: 17
Author(s): Juhyung Lee, Yeon Uk Ko, Yuhyun Chung, Nuri Yun, Myung-Jin Kim, Kyungjin Kim, Young Jun Oh
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-33235-y

An Evolutionarily Conserved Mesodermal Enhancer in Vertebrate Zic3
Cited by: 3
Author(s): Yuri S. Odaka, Takahide Tohmonda, Atsushi Toyoda, Jun Aruga
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-34078-3

Multi-population genomic analysis of malaria parasites indicates local selection and differentiation at the gdv1 locus regulating sexual development
Cited by: 27
Author(s): Craig W. Duffy, Alfred Amambua-Ngwa, Ambroise D. Ahouidi, Mahamadou Diakité, Gordon A. Awandare, Hampâté Bâ, Sarah J. Tarr, Lee G. Murray, Lindsay B. Stewart, Umberto D’Alessandro, Thomas D. Otto, Dominic Kwiatkowski, David J. Conway
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-34802-z

Conserved Noncoding Sequences Boost ADR1 and SP1 Regulated Human Swiprosin-1 Promoter Activity
Cited by: 1
Author(s): Ramesh P. Thylur, Ahn Sk, Eunhea Jung, Chang‐Duk Jun, Young-Min Hyun
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-35184-y

Unique, Intersecting, and Overlapping Roles of C/EBP β and CREB in Cells of the Innate Immune System
Cited by: 8
Author(s): Jason L. Larabee, G Hauck, Jimmy D. Ballard
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-019-38663-y

A genome-wide enhancer/suppressor screen for Dube3a interacting genes in Drosophila melanogaster
Cited by: 1
Author(s): Kevin A. Hope, Addison McGinn, Lawrence T. Reiter
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-39215-0

Extensive reprogramming of the nascent transcriptome during iPSC to hepatocyte differentiation
Cited by: 19
Author(s): Leena E. Viiri, Tommi Rantapero, Mostafa Kiamehr, Anna Alexanova, Mikko Oittinen, Keijo Viiri, Henri Niskanen, Matti Nykter, Minna U. Kaikkonen, Katriina Aalto‐Setälä
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-43892-2

Development and validation of a novel panel of 16 STR markers for simultaneous diagnosis of β-thalassemia, aneuploidy screening, maternal cell contamination detection and fetal sample authenticity in PND and PGD/PGS cases
Cited by: 5
Author(s): Zohreh Sharifi, Faezeh Rahiminejad, Atefeh Joudaki, Ameneh Sarhadi Bandehi, Hossein Farahzadi, Yeganeh Keshvar, Fatemeh Golnabi, Sanaz Naderi, Rasaneh Yazdani, Mehdi Shafaat, Shirin Ghadami, Maryam Abiri, Sirous Zeinali
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-52796-0

Upregulation of Yy1 Suppresses Dilated Cardiomyopathy caused by Ttn insufficiency
Cited by: 7
Author(s): Dan Liao, Wei-Ming Chen, Chia Yee Tan, Jing Xuan Wong, Pui Shi Chan, Lek Wen Tan, Roger Foo, Jianming Jiang
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-019-52528-4

Dopamine D2 receptor modulates Wnt expression and control of cell proliferation
Cited by: 23
Author(s): Fei Han, Prasad Konkalmatt, Chaitanya Mokashi, Mirgender Kumar, Yanrong Zhang, Allen Ko, Zachary J. Farino, Laureano D. Asico, Gaosi Xu, John J Gildea, Xiaoxu Zheng, Robin A. Felder, Robin Lee, Pedro A. José, Zachary Freyberg, Inés Armando
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-019-53458-x

Comparative genomic analysis of eutherian connexin genes
Cited by: 9
Author(s): Marko Premzl
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-019-54389-3

Genomes, expression profiles, and diversity of mitochondria of the White-footed Deermouse Peromyscus leucopus, reservoir of Lyme disease and other zoonoses
Cited by: 8
Author(s): Alan G. Barbour, Hanjuan Shao, Vanessa J. Cook, James G. Baldwin-Brown, Jean I. Tsao, Anthony D. Long
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-019-56276-3

Up-regulated fibronectin in 3D culture facilitates spreading of triple negative breast cancer cells on 2D through integrin β-5 and Src
Cited by: 14
Author(s): Hwa Jeong Park, David M. Helfman
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-57972-1

Transcriptional regulation of the IL-13Rα2 gene in human lung fibroblasts
Cited by: 4
Author(s): L.R.K. Penke, Hideyasu Ouchi, John D. Speth, Njira L Lugogo, Yvonne J. Huang, Steven K. Huang, Marc Peters‐Golden
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-60673-4

Genome-wide analysis of the HSP101/CLPB gene family for heat tolerance in hexaploid wheat
Cited by: 18
Author(s): Eva Erdayani, R. Nagarajan, Nathan P. Grant, Kulvinder S. Gill
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-60844-3

A Systematic Study of the Impact of Estrogens and Selective Estrogen Receptor Modulators on Prostate Cancer Cell Proliferation
Cited by: 24
Author(s): Camille Lafront, Lucas Germain, Cindy Weidmann, Étienne Audet-Walsh
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-61950-y

Visualization of Endogenous Type I TGF-β Receptor Baboon in the Drosophila Brain
Cited by: 2
Author(s): Yen-Wei Lai, Sao-Yu Chu, Jian-Chiuan Li, Po‐Lin Chen, Chunhong Chen, Hung–Hsiang Yu
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-65006-z

Critical role of SOX2–IGF2 signaling in aggressiveness of bladder cancer
Cited by: 15
Author(s): Yu Fan Chiu, Chia Chang Wu, Ming Han Kuo, Chia Cheng Miao, M. Y. Zheng, Pei-Yu Chen, Sheng Chieh Lin, Junn Liang Chang, Yuan Hung Wang, Yu‐Ting Chou
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-65913-1

Energy and nitrogenous waste from glutamate/glutamine catabolism facilitates acute osmotic adjustment in non-neuroectodermal branchial cells
Cited by: 9
Author(s): Po-Chiun Huang, Tzu Yen Liu, Marian Yong-An Hu, Isabel Casties, Yung Che Tseng
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-020-69885-0

Identification of epidermal differentiation genes of the tuatara provides insights into the early evolution of lepidosaurian skin
Cited by: 10
Author(s): Karin Brigit Holthaus, Lorenzo Alibardi, Erwin Tschachler, Leopold Eckhart
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-020-75773-4

Molecular specializations of deep cortical layer analogs in songbirds
Cited by: 15
Author(s): Alexander A. Nevue, Peter V. Lovell, Morgan Wirthlin, Claudio V. Mello
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-020-76959-6

Transcriptional signatures of the small intestinal mucosa in response to ethanol in transgenic mice rich in endogenous n3 fatty acids
Cited by: 3
Author(s): Josiah Hardesty, Jeffrey Warner, Ying Song, Eric C. Rouchka, Chih-Yu Chen, Jing Kang, Craig J. McClain, Dennis R. Warner, Irina Kirpich
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-020-78541-6

Computational insights into RNAi-based therapeutics for foot and mouth disease of Bos taurus
Cited by: 0
Author(s): Tanmaya Kumar Sahu, Anoop Kishor Singh Gurjar, Prabina Kumar Meher, Cini Varghese, Sudeep Marwaha, G. P. Rao, Anil Rai, Neha Guleria, Suresh H. Basagoudanavar, Aniket Sanyal, Atmakuri Ramakrishna Rao
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-020-78798-x

Enzalutamide response in a panel of prostate cancer cell lines reveals a role for glucocorticoid receptor in enzalutamide resistant disease
Cited by: 27
Author(s): Rebecca Smith, Moqing Liu, Tiera Liby, Nora Bayani, Elmar Bucher, Kami Chiotti, Daniel S. Derrick, Anne Chauchereau, Laura M. Heiser, Joshi J. Alumkal, Heidi S. Feiler, Peter R. Carroll, James E. Korkola
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-021-82557-x

GATA4 blocks squamous epithelial cell gene expression in human esophageal squamous cells
Cited by: 5
Author(s): Roman Stavniichuk, Ann DeLaForest, Cayla A. Thompson, James J. Miller, Rhonda F. Souza, Michele A. Battle
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-021-84491-4

Polymorphic variants in Sweet and Umami taste receptor genes and birthweight
Cited by: 4
Author(s): Riccardo Farinella, Ilaria Erbi, Alice Bedini, Sara Donato, Manuel Gentiluomo, Claudia Angelucci, Antonella Lupetti, Armando Cuttano, Francesca Moscuzza, Cristina Tuoni, Cosmeri Rizzato, Massimiliano Ciantelli, Daniele Campa
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-021-95936-1

The ABCC4 gene is associated with pyometra in golden retriever dogs
Cited by: 3
Author(s): Maja L. Arendt, Aime Ambrosen, Tove Fall, Marcin Kierczak, Katarina Tengvall, Jennifer R. S. Meadows, Åsa Karlsson, Anne-Sofie Lagerstedt, Tomas F. Bergström, Gerhard Andersson, Kerstin Lindblad‐Toh, Ragnvi Hagman
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-96626-8

A comparative recombination analysis of human coronaviruses and implications for the SARS-CoV-2 pandemic
Cited by: 41
Author(s): Simon Pollett, Matthew A. Conte, Mark A Sanborn, Richard G. Jarman, Grace M. Lidl, Kayvon Modjarrad, Irina Maljkovic Berry
Software Mentions: 1
Published: about 5 years ago

10.1155/2016/3675283

KCl-Dependent Release of Mitochondrial Membrane-Bound Arginase Appears to Be a Novel Variant of Arginase-II
Cited by: 1
Author(s): Sunita Mishra, Mishra Rajnikant
Software Mentions: 1
Published: over 10 years ago

10.1038/s41392-021-00620-5

EpiMap: Fine-tuning integrative epigenomics maps to understand complex human regulatory genomic circuitry
Cited by: 6
Author(s): Dave S. B. Hoon, Negin Rahimzadeh, Matías A. Bustos
Software Mentions: 1
Published: over 5 years ago

10.1186/s13395-019-0218-x

Development of a high-throughput screen to identify small molecule enhancers of sarcospan for the treatment of Duchenne muscular dystrophy
Cited by: 6
Author(s): Cynthia Shu, Ariana N. Kaxon-Rupp, Judd R. Collado, Robert Damoiseaux, Rachelle H. Crosbie
Software Mentions: 1
Published: almost 7 years ago

10.1186/s40064-016-2950-6

Japanese traditional dietary fungus koji Aspergillus oryzae functions as a prebiotic for Blautia coccoides through glycosylceramide: Japanese dietary fungus koji is a new prebiotic
Cited by: 37
Author(s): Hiroshi Hamajima, Haruka Matsunaga, Ayami Fujikawa, Tomoya Sato, Susumu Mitsutake, Teruyoshi Yanagita, Koji Nagao, Jiro Nakayama, Hiroshi Kitagaki
Software Mentions: 1
Published: about 10 years ago

10.1016/j.stemcr.2018.03.006

PLAG1 and USF2 Co-regulate Expression of Musashi-2 in Human Hematopoietic Stem and Progenitor Cells
Cited by: 21
Author(s): Muluken Belew, Sonam Bhatia, Ava Keyvani Chahi, Stefan Rentas, Jonathan S. Draper, Kristin J. Hope
Software Mentions: 1
Published: over 8 years ago

10.1016/j.stemcr.2020.07.007

Two Functional Axes of Feedback-Enforced PRC2 Recruitment in Mouse Embryonic Stem Cells
Cited by: 16
Author(s): Matteo Perino, Guido van Mierlo, Chet Hong Loh, Sandra M.T. Wardle, Dick W. Zijlmans, Hendrik Marks, Gert Jan C. Veenstra
Software Mentions: 1
Published: almost 6 years ago

10.1155/2013/473416

Emerging Molecular Targets for Brain Repair after Stroke
Cited by: 9
Author(s): Jerzy Krupiński, Mark Slevin
Software Mentions: 1
Published: over 13 years ago

10.3390/toxins4090729

Interaction between Shiga Toxin and Monoclonal Antibodies: Binding Characteristics and in Vitro Neutralizing Abilities
Cited by: 31
Author(s): Letícia B. Rocha, Daniela Luz, Cláudia Trigo Pedroso de Moraes, Andressa Caravelli, Ivan Filipe de Almeida Lopes Fernandes, Beatriz E. C. Guth, Denise S. P. Q. Horton, Roxane Maria Fontes Piazza
Software Mentions: 1
Published: almost 14 years ago

10.1038/tp.2015.63

Epigenetic modifications of the glucocorticoid receptor gene are associated with the vulnerability to psychopathology in childhood maltreatment
Cited by: 98
Author(s): Karl M. Radtke, Maggie Schauer, Helen M. Gunter, Martina Ruf-Leuschner, Johanna Sill, Axel Meyer, Thomas Elbert
Software Mentions: 1
Published: over 11 years ago

10.1038/s41398-017-0088-0

Whole-exome sequencing and gene-based rare variant association tests suggest that PLA2G4E might be a risk gene for panic disorder
Cited by: 15
Author(s): Yoshiro Morimoto, Mihoko Shimada-Sugimoto, Takeshi Otowa, Shintaro Yoshida, Akira Kinoshita, Hiroyuki Mishima, Naohiro Yamaguchi, T. Mori, Akira Imamura, Hiroki Ozawa, Naohiro Kurotaki, Christiane Ziegler, Katharina Domschke, Jürgen Deckert, Tadashi Umekage, Mamoru Tochigi, Hisanobu Kaiya, Yuji Okazaki, Katsushi Tokunaga, Tsukasa Sasaki, Koh-ichiro Yoshiura, Shinji Ono
Software Mentions: 1
Published: over 8 years ago

10.1038/s41398-019-0509-3

Glucocorticoid-induced leucine zipper “quantifies” stressors and increases male susceptibility to PTSD
Cited by: 22
Author(s): Maya Lebow, M. Schroêder, Michael Tsoory, Dorin Holzman-Karniel, Divya Mehta, Shifra Ben‐Dor, Shosh Gil, Bekh Bradley, Alicia K. Smith, Tanja Jovanović, Kerry J. Ressler, Elisabeth B. Binder, Alon Chen
Software Mentions: 1
Published: about 7 years ago

10.1038/s41398-020-00888-1

Identification of a novel polymorphism associated with reduced clozapine concentration in schizophrenia patients—a genome-wide association study adjusting for smoking habits
Cited by: 27
Author(s): Robert L. Smith, Kevin O’Connell, Lavinia Athanasiu, Srdjan Djurovic, Marianne Kristiansen Kringen, Ole A. Andreassen, Espen Molden
Software Mentions: 1
Published: about 6 years ago

10.1038/s41398-021-01252-7

RNA editing of the 5-HT2C receptor in the central nucleus of the amygdala is involved in resilience behavior
Cited by: 4
Author(s): Gal Warhaftig, Chaya Mushka Sokolik, Khen Khermesh, Yehuda Lichtenstein, Michal Barák, Tzofnat Bareli, Erez Y. Levanon, Gal Yadid
Software Mentions: 1
Published: over 5 years ago

10.1128/mBio.02288-16

Differential Binding of Mitochondrial Transcripts by MRB8170 and MRB4160 Regulates Distinct Editing Fates of Mitochondrial mRNA in Trypanosomes
Cited by: 16
Author(s): Sameer Dixit, Michaela Müller-McNicoll, Vojtěch David, Kathi Zarnack, Jernej Ule, Hassan Hashimi, Julius Lukeš
Software Mentions: 1
Published: over 9 years ago

10.1128/mBio.00485-20

<i>Tombusvirus</i> p19 Captures RNase III-Cleaved Double-Stranded RNAs Formed by Overlapping Sense and Antisense Transcripts in Escherichia coli
Cited by: 5
Author(s): Linfeng Huang, Padraig Deighan, Jingmin Jin, Yingxue Li, Hung-Chi Cheung, Elaine Lee, Shirley S. Mo, Heather Hoover, Sahar Abubucker, Nancy Finkel, Larry A. McReynolds, Ann Hochschild, Judy Lieberman
Software Mentions: 1
Published: about 6 years ago

10.1128/mSphere.00014-15

The Human Adenovirus Type 5 E4orf6/E1B55K E3 Ubiquitin Ligase Complex Can Mimic E1A Effects on E2F
Cited by: 6
Author(s): Frédéric Dallaire, Sabrina Schreiner, G. Eric Blair, Thomas Dobner, Philip E. Branton, Paola Blanchette
Software Mentions: 1
Published: over 10 years ago

10.1007/s00439-021-02289-w

Whole-genome sequencing identifies functional noncoding variation in SEMA3C that cosegregates with dyslexia in a multigenerational family
Cited by: 5
Author(s): Amaia Carrión-Castillo, Sara Busquets Estruch, Ben Maassen, Barbara Franke, Clyde Francks, Simon E. Fisher
Software Mentions: 1
Published: over 5 years ago

10.1007/s00439-015-1616-8

Genetic variation in the immunosuppression pathway genes and breast cancer susceptibility: a pooled analysis of 42,510 cases and 40,577 controls from the Breast Cancer Association Consortium
Cited by: 7
Author(s): Jieping Lei, Anja Rudolph, Kirsten B. Moysich, Sabine Behrens, Ellen L. Goode, Manjeet K. Bolla, Joe Dennis, Alison M. Dunning, Douglas F. Easton, Qin Wang, Javier Benı́tez, John L. Hopper, Melissa C. Southey, Marjanka K. Schmidt, Annegien Broeks, Peter A. Fasching, Lothar Haeberle, Julian Peto, Isabel dos‐Santos‐Silva, Elinor J. Sawyer, Ian Tomlinson, Barbara Burwinkel, Frederik Marmé, Pascal Guénel, Thérèse Truong, Stig E. Bojesen, Henrik Flyger, Sune F. Nielsen, Børge G. Nordestgaard, Anna González‐Neira, Primitiva Menéndez, Hoda Anton‐Culver, Susan L. Neuhausen, Hermann Brenner, Volker Arndt, Alfons Meindl, Rita K. Schmutzler, Hiltrud Brauch, Ute Hamann, Heli Nevanlinna, Rainer Fagerholm, Thilo Dörk, Natalia Bogdanova, Arto Mannermaa, Jaana M. Hartikainen, kConFab Investigators, Laurien Van Dijck, Ann Smeets, Dieter Flesch-Janys, Ursula Eilber, Paolo Radice, Paolo Peterlongo, Fergus J. Couch, Emily Hallberg, Graham G. Giles, Roger L. Milne, Christopher A. Haiman, Fredrick Schumacher, Jacques Simard, Mark S. Goldberg, Vessela N. Kristensen, Anne‐Lise Børresen‐Dale, Zheng Wang, Alicia Beeghly–Fadiel, Robert Winqvist, Mervi Grip, Irene L. Andrulis, Gord Glendon, Montserrat García‐Closas, Jonine D. Figueroa, Kamila Czene, Judith S. Brand, Hatef Darabi, Mikael Eriksson, Per Hall, Jingmei Li, Angela Cox, Simon S. Cross, Paul D.P. Pharoah, Mitul Shah, Maria Kabisch, Diana Torres, Anna Jakubowska, Jan Lubiński, Foluso O. Ademuyiwa, Christine B. Ambrosone, Anthony Swerdlow, Michael E. Jones, Jenny Chang–Claude
Software Mentions: 1
Published: almost 11 years ago

10.1007/s00439-018-1965-1

De novo and inherited loss-of-function variants of ATP2B2 are associated with rapidly progressive hearing impairment
Cited by: 24
Author(s): Jeroen J. Smits, Jaap Oostrik, Andy J. Beynon, Sarina G. Kant, P. A. M. de Koning Gans, Liselotte J. C. Rotteveel, Jolien S. Klein Wassink-Ruiter, Rolien Free, Saskia M. Maas, Jiddeke van de Kamp, Paul Merkus, Wouter Koole, Ilse Feenstra, R.J.C. Admiraal, Cornelis P. Lanting, Margit Schraders, Helger G. Yntema, Ronald J.E. Pennings, Hannie Kremer
Software Mentions: 1
Published: almost 8 years ago

10.1007/s00439-015-1602-1

Mutation in CEP63 co-segregating with developmental dyslexia in a Swedish family
Cited by: 20
Author(s): Elisabet Einarsdottir, Idor Svensson, Fahimeh Darki, Myriam Peyrard-Janvid, Jessica M. Lindvall, Adam Ameur, Christer Jacobsson, Torkel Klingberg, Juha Kere, Hans Matsson
Software Mentions: 1
Published: almost 11 years ago

10.1186/s40246-021-00337-0

Regulatory VCAN polymorphism is associated with shoulder pain and disability in breast cancer survivors
Cited by: 3
Author(s): Trevor S. Mafu, Alison V. September, Delva Shamley
Software Mentions: 1
Published: about 5 years ago

10.1186/s40246-020-00258-4

TRPM3_miR-204: a complex locus for eye development and disease
Cited by: 24
Author(s): Alan Shiels
Software Mentions: 1
Published: over 6 years ago

10.1093/hmg/ddt647

Disruption of SATB2 or its long-range cis-regulation by SOX9 causes a syndromic form of Pierre Robin sequence
Cited by: 50
Author(s): Jacqueline K. Rainger, Shipra Bhatia, Hemant Bengani, Philippe Gautier, Joe Rainger, Matt Pearson, Morad Ansari, Jayne Crow, Felicity V. Mehendale, Božena Pálinkášová, Michael J. Dixon, Pamela J. Thompson, Mar Matarı́n, Sanjay M. Sisodiya, Dirk A. Kleinjan, David R. FitzPatrick
Software Mentions: 1
Published: over 12 years ago

10.1093/hmg/ddz093

MRPS25 mutations impair mitochondrial translation and cause encephalomyopathy
Cited by: 32
Author(s): Enrico Bugiardini, Alice Mitchell, Ilaria Dalla Rosa, Hue-Tran Horning-Do, Alan M Pitmann, Olivia V. Poole, Janice L. Holton, Sachit Shah, Cathy E. Woodward, Iain P. Hargreaves, R. Quinlivan, Alexey Amunts, Rudolf J. Wiesner, Henry Houlden, Ian Holt, Michael G. Hanna, Robert D S Pitceathly, Antonella Spinazzola
Software Mentions: 1
Published: over 7 years ago

10.7150/ijbs.35520

Impact of chronically alternating light-dark cycles on circadian clock mediated expression of cancer (glioma)-related genes in the brain
Cited by: 13
Author(s): Suliman Khan, Yang Liu, Rabeea Siddique, Ghulam Nabi, Mengzhou Xue, Hongwei Hou
Software Mentions: 1
Published: over 7 years ago

10.1186/1756-9966-27-19

Non-protein coding RNA biomarkers and differential expression in cancers: a review
Cited by: 55
Author(s): Massimo Mallardo, Palmiro Poltronieri, Oscar Fernando D’Urso
Software Mentions: 1
Published: about 18 years ago

10.1186/s13046-017-0646-6

FOXA1 inhibits hepatocellular carcinoma progression by suppressing PIK3R1 expression in male patients
Cited by: 35
Author(s): Shujiao He, Junyi Zhang, Wan Zhang, Fengsheng Chen, Rong Luo
Software Mentions: 1
Published: almost 9 years ago

10.1084/jem.20180992

Endothelial <i>Cdk5</i> deficit leads to the development of spontaneous epilepsy through CXCL1/CXCR2-mediated reactive astrogliosis
Cited by: 35
Author(s): Xiuxiu Liu, Lin Yang, Ling-Xiao Shao, Yang He, Gang Wu, Yu-huan Bao, Nannan Lu, De Gong, LU Ya-ping, Tiantian Cui, Ninghe Sun, Danyang Chen, Wei‐Xing Shi, Kohji Fukunaga, Hongshan Chen, Zhong Chen, Feng Han, Yuanqing Lu
Software Mentions: 1
Published: almost 7 years ago

10.1002/jev2.12053

Mesenchymal Stem Cell exosome delivered Zinc Finger Protein activation of cystic fibrosis transmembrane conductance regulator
Cited by: 22
Author(s): Olga Villamizar, Shafagh A. Waters, Tristan Scott, Nicole Grepo, Adam Jaffé, Kevin V. Morris
Software Mentions: 1
Published: over 5 years ago

10.1186/s43141-020-0021-4

In silico analysis of a novel causative mutation in Cadherin23 gene identified in an Omani family with hearing loss
Cited by: 3
Author(s): Mohammed Nasser Al-Kindi, Mazin Jawad Al-Khabouri, Khalsa Ahmad Al-Lamki, Flavia Palombo, Tommaso Pippucci, Giovanni Romeo, Nadia Al-Wardy
Software Mentions: 1
Published: over 6 years ago

10.1186/s43141-021-00117-2

Molecular characterization of coat color gene in Sahiwal versus Karan Fries bovine
Cited by: 4
Author(s): Talla Sridhar Goud, R. C. Upadhyay, Vijaya Bhaskar Reddy Pichili, Suneel Kumar Onteru, Kiranmai Chadipiralla
Software Mentions: 1
Published: over 5 years ago

10.1155/2017/9769171

Tissue- and Cell Type-Specific Expression of the Long Noncoding RNA Klhl14-AS in Mouse
Cited by: 8
Author(s): Sara Carmela Credendino, Nicole Lewin, Mauro Dal Secco de Oliveira, Swaraj Basu, Barbara D’Andrea, Elena Amendola, Luigi Guida, Antonio Nardone, Remo Sanges, Mario De Felice, Gabriella De Vita
Software Mentions: 1
Published: over 9 years ago

10.1186/1687-9856-2012-8

Molecular diagnostic testing for Klinefelter syndrome and other male sex chromosome aneuploidies
Cited by: 4
Author(s): Karl Hager, Kori Jennings, Seiyu Hosono, Susan Howell, Jeffrey R. Gruen, Scott A. Rivkees, Nicole Tartaglia, Henry M. Rinder
Software Mentions: 1
Published: over 14 years ago

10.1167/iovs.61.10.22

Recurrent Rare Copy Number Variants Increase Risk for Esotropia
Cited by: 6
Author(s): Mary C. Whitman, Silvio Alessandro Di Gioia, Wai‐Man Chan, Alon Gelber, Brandon M Pratt, Jéssica Bell, Thomas E Collins, James A. Knowles, Christopher Armoskus, Michele T. Pato, Carlos N. Pato, Sherin Shaaban, Sandra E Staffieri, Sarah MacKinnon, Gail Maconachie, James E Elder, Elias I. Traboulsi, Irène Gottlob, David A. Mackey, David G. Hunter, Elizabeth C. Engle
Software Mentions: 1
Published: about 6 years ago

10.2196/mental.8597

Efficacy and Moderation of Mobile App–Based Programs for Mindfulness-Based Training, Self-Compassion Training, and Cognitive Behavioral Psychoeducation on Mental Health: Randomized Controlled Noninferiority Trial
Cited by: 79
Author(s): Winnie W. S. Mak, Alan C.Y. Tong, Sindy Y. C. Yip, Wacy W. S. Lui, Floria H. N. Chio, Amy Ty Chan, Clifford Wong
Software Mentions: 1
Published: almost 8 years ago

10.3390/ijerph14040345

Genomic Evidence for Bacterial Determinants Influencing Obesity Development
Cited by: 16
Author(s): Raphael D. Isokpehi, Shaneka S. Simmons, Matilda Johnson, Marinelle Payton
Software Mentions: 1
Published: over 9 years ago

10.1038/onc.2014.421

FOXA1 repression is associated with loss of BRCA1 and increased promoter methylation and chromatin silencing in breast cancer
Cited by: 31
Author(s): Chun Gong, Keiji Fujino, Lara J. Monteiro, Ana Gomes, Rinske Drost, Hazel Davidson‐Smith, Satoru Takeda, Ui‐Soon Khoo, Jos Jonkers, Duncan Sproul, Eric W.‐F. Lam
Software Mentions: 1
Published: over 11 years ago

10.1038/s41388-020-01606-3

Comparative analysis of the AIB1 interactome in breast cancer reveals MTA2 as a repressive partner which silences E-Cadherin to promote EMT and associates with a pro-metastatic phenotype
Cited by: 8
Author(s): Damir Varešlija, Elspeth Ward, Siobhan Purcell, Nicola Cosgrove, Sinéad Cocchiglia, Philip J O'Halloran, Sara Charmsaz, Fiona T. Bane, Francesca Brett, Michael Farrell, Jane Cryan, Alan Beausang, Lance Hudson, Arran K Turnbul, J. M. Dixon, Arnold D. Hill, Nolan Priedigkeit, Steffi Oesterreich, Adrian V. Lee, Andrew H. Sims, Aisling M. Redmond, Jason S. Carroll, Leonie S. Young
Software Mentions: 1
Published: over 5 years ago

10.1038/s41388-021-01899-y

MUC1-C activates the PBAF chromatin remodeling complex in integrating redox balance with progression of human prostate cancer stem cells
Cited by: 31
Author(s): Masaru Hagiwara, Atsushi Fushimi, Nami Yamashita, Atrayee Bhattacharya, Hasan Rajabi, Mark D. Long, Yota Yasumizu, Mototsugu Oya, Song Liu, Donald Küfe
Software Mentions: 1
Published: about 5 years ago

10.1673/031.009.1801

The Insect Chemoreceptor Superfamily inDrosophila pseudoobscura: Molecular Evolution of Ecologically-Relevant Genes Over 25 Million Years
Cited by: 16
Author(s): Hugh M. Robertson
Software Mentions: 1
Published: over 17 years ago

10.1515/jib-2021-0001

Novel perspectives for SARS-CoV-2 genome browsing
Cited by: 2
Author(s): Visam Gültekin, Jens Allmer
Software Mentions: 1
Published: over 5 years ago

10.1194/jlr.M062497

miR-146a-5p inhibits TNF-α-induced adipogenesis via targeting insulin receptor in primary porcine adipocytes
Cited by: 36
Author(s): Di Wu, Qianyun Xi, Xiao Cheng, Tao Dong, Xiaotong Zhu, Gang Shu, Lina Wang, Qingyan Jiang, Yongliang Zhang
Software Mentions: 1
Published: about 10 years ago

10.1155/2013/517943

Association of RXR-Gamma Gene Variants with Familial Combined Hyperlipidemia: Genotype and Haplotype Analysis
Cited by: 17
Author(s): Federica Sentinelli, Ilenia Minicocci, Anna Mestice, Luisa Nanni, Stefano Romeo, Michela Incani, Maria Gisella Cavallo, Andrea Lenzi, Marcello Arca, Marco Giorgio Baroni
Software Mentions: 1
Published: over 13 years ago

10.1186/s13256-018-1608-0

Novel compound heterozygote mutations in the ATP7B gene in an Iranian family with Wilson disease: a case report
Cited by: 8
Author(s): Omid Daneshjoo, Masoud Garshasbi
Software Mentions: 1
Published: over 8 years ago

10.1007/s12031-018-1044-z

The Regulation of Monoamine Oxidase A Gene Expression by Distinct Variable Number Tandem Repeats
Cited by: 19
Author(s): Maurizio Manca, Veridiana Pessoa, Ana Illera Lopez, Patrick T. Harrison, Fábio Miyajima, Helen Sharp, Andrew Pickles, Jonathan Hill, Chris Murgatroyd, Vivien J. Bubb, John P. Quinn
Software Mentions: 1
Published: over 8 years ago

10.18502/jovr.v15i2.6730

Screening for Novel LOX and SOD1 Variants in Keratoconus Patients from Brazil
Cited by: 8
Author(s): Diego Nery Benevides Gadelha, Alex Felipe Barbosa Feitosa, Rafaela Gomes da Silva, Luana Talita Antunes, Matheus Cavalcanti Muniz, Matheus Alencar de Oliveira, Dáfine de Oliveira Andrade, Nathalia Mayanna da Paz Silva, Sebastião Cronemberger, Bruno Luiz Fonseca Schamber-Reis
Software Mentions: 1
Published: over 6 years ago

10.1016/j.isci.2019.10.055

Deciphering the Gene Regulatory Landscape Encoded in DNA Biophysical Features
Cited by: 7
Author(s): Abhijeet Pataskar, Willem Vanderlinden, Johannes Friedrich Emmerig, Aditi Singh, Jan Lipfert, Vijay Tiwari
Software Mentions: 1
Published: almost 7 years ago

10.1186/s13048-021-00834-9

p38β - MAPK11 and its role in female cancers
Cited by: 11
Author(s): Periklis Katopodis, Rachel Kerslake, Athanasios Zikopoulos, Nefeli Eirini Beri, Vladimir Anikin
Software Mentions: 1
Published: about 5 years ago

10.18632/oncotarget.7715

P300 acetyltransferase regulates fatty acid synthase expression, lipid metabolism and prostate cancer growth
Cited by: 41
Author(s): Xiaokun Gang, Yinhui Yang, Jian Zhong, Kui Jiang, Yunqian Pan, Jeffrey Karnes, Jun Zhang, Wanhai Xu, Guixia Wang, Haojie Huang
Software Mentions: 1
Published: over 10 years ago

10.18632/oncotarget.7937

Tumor-promoting function and prognostic significance of the RNA-binding protein T-cell intracellular antigen-1 in esophageal squamous cell carcinoma
Cited by: 17
Author(s): Junichi Hamada, Katsutoshi Shoda, Kiyoshi Masuda, Yuji Fujita, Takuya Naruto, Tomohiro Kohmoto, Yuko Miyakami, Miki Watanabe, Yasusei Kudo, Hitoshi Fujiwara, Daisuke Ichikawa, Eigo Otsuji, Issei Imoto
Software Mentions: 1
Published: over 10 years ago

10.18632/oncotarget.7764

Associations between polymorphisms of long non-coding RNA MEG3 and risk of colorectal cancer in Chinese
Cited by: 53
Author(s): Xin Cao, Shulin Zhuang, Yong Hu, Xi Liu, Lichun Deng, Sheng Huaming, Weisheng Shen
Software Mentions: 1
Published: over 10 years ago

10.18632/oncotarget.11324

The cytokine-cosmc signaling axis upregulates the tumor-associated carbohydrate antigen Tn
Cited by: 4
Author(s): Chia Wen Ho, Chia‐Hua Lin, Yi Wei Liaw, Hsiao Ling Chiang, Yu Tang Chin, Rui Huang, Hung Cheng Lai, Yaw Wen Hsu, Po Jan Kuo, Chiao-En Chen, Hung Yun Lin, Jacqueline Whang‐Peng, Shin Nieh, Earl Fu, Leroy F. Liu, Jaulang Hwang
Software Mentions: 1
Published: about 10 years ago

10.18632/oncotarget.13746

An annotated list of bivalent chromatin regions in human ES cells: a new tool for cancer epigenetic research
Cited by: 41
Author(s): Franck Court, Philippe Arnaud
Software Mentions: 1
Published: almost 10 years ago

10.18632/oncotarget.13720

Design and implementation of a mobile system for lung cancer patient follow-up in China and initial report of the ongoing patient registry
Cited by: 10
Author(s): Xiangyun Ye, Wei Hua Jia, Ziming Li, Xiaomin Niu, Jiemin Wang, Yunqin Chen, Zong-Ming Guo, Shun Lü
Software Mentions: 1
Published: almost 10 years ago

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