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10.7554/eLife.12059

Quantitative neuroanatomy for connectomics in Drosophila
Cited by: 247
Author(s): Casey M Schneider-Mizell, Stephan Gerhard, Mark Longair, Tom Kazimiers, Feng Li, Maarten Zwart, Andrew Champion, Frank M. Midgley, Richard D. Fetter, Stephan Saalfeld, Albert Cardona
Software Mentions: 1
Published: over 10 years ago

10.2196/jmir.3.3.e25

Journal of Medical Internet Research is now indexed in Medline
Cited by: 4
Author(s): Günther Eysenbach
Software Mentions: 1
Published: about 25 years ago

10.3390/ijms21062002

Drosophila SLC22 Orthologs Related to OATs, OCTs, and OCTNs Regulate Development and Responsiveness to Oxidative Stress
Cited by: 17
Author(s): Darcy C. Engelhart, Priti Azad, Suwayda Ali, Jeffry C. Granados, Gabriel G. Haddad, Sanjay K. Nigám
Software Mentions: 1
Published: over 6 years ago

10.1098/rstb.2020.0157

MolluscDB: a genome and transcriptome database for molluscs
Cited by: 13
Author(s): Carlos Caurcel, Dominik R. Laetsch, Richard Challis, Sujai Kumar, Karim Gharbi, Mark Blaxter
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms21093096

Proteomic Profiling of Colon Cancer Tissues: Discovery of New Candidate Biomarkers
Cited by: 12
Author(s): Miriam Buttacavoli, Nadia Ninfa Albanese, Elena Roz, Ida Pucci‐Minafra, Salvatore Feo, Patrizia Cancemi
Software Mentions: 1
Published: over 6 years ago

10.1098/rstb.2009.0219

Genome-wide scans for footprints of natural selection
Cited by: 294
Author(s): Tarás K. Oleksyk, Michael W. Smith, Stephen J. O’Brien
Software Mentions: 1
Published: over 16 years ago

10.1007/s11095-017-2130-6

Network Reconstruction Reveals that Valproic Acid Activates Neurogenic Transcriptional Programs in Adult Brain Following Traumatic Injury
Cited by: 24
Author(s): Gerald A. Higgins, Patrick E. Georgoff, Vahagn C. Nikolian, Ari Allyn-Feuer, Brian Pauls, Richard Higgins, Hasan E. Alam
Software Mentions: 1
Published: over 9 years ago

10.7717/peerj.10312

Evolutionary analysis of chloroplast tRNA of Gymnosperm revealed the novel structural variation and evolutionary aspect
Cited by: 4
Author(s): Tingting Zhang, Yi-Kun Hou, Ting Yang, Shu-Ya Zhang, Ming Yue, Jianni Liu, Zhong-Hu Li
Software Mentions: 1
Published: almost 6 years ago

10.7717/peerj.639

Associating disease-related genetic variants in intergenic regions to the genes they impact
Cited by: 22
Author(s): Geoff Macintyre, Antonio Jimeno-Yepes, Cheng Soon Ong, Karin Verspoor
Software Mentions: 1
Published: almost 12 years ago

10.1186/2040-2392-4-8

Whole-genome sequencing in an autism multiplex family
Cited by: 73
Author(s): Lingling Shi, Xu Zhang, Ryan Golhar, F. George Otieno, Mingze He, Cuiping Hou, Cecilia Kim, Brendan J. Keating, Gholson J. Lyon, Kai Wang, Hákon Hákonarson
Software Mentions: 1
Published: over 13 years ago

10.7717/peerj.7558

The sugarcane mitochondrial genome: assembly, phylogenetics and transcriptomics
Cited by: 13
Author(s): Dyfed Lloyd Evans, Thandekile Thandiwe Hlongwane, Suvarna Joshi, Diego Mauricio Riaño-Pachón
Software Mentions: 1
Published: almost 7 years ago

10.3390/pathogens10050552

Occurrence of Legionella spp. in Man-Made Water Sources: Isolates Distribution and Phylogenetic Characterization in the Emilia-Romagna Region
Cited by: 9
Author(s): Marta Mazzotta, Silvano Salaris, Maria Rosaria Pascale, Luna Girolamini, Sandra Cristino
Software Mentions: 1
Published: over 5 years ago

10.1186/s40851-017-0071-x

An efficient system for homology-dependent targeted gene integration in medaka (Oryzias latipes)
Cited by: 29
Author(s): Yu Murakami, Satoshi Ansai, Akari Yonemura, Masato Kinoshita
Software Mentions: 1
Published: about 9 years ago

10.3897/zookeys.150.2248

Data standards, sense and stability: Scratchpads, the ICZN and ZooBank
Cited by: 0
Author(s): Edward Baker, Ellinor Michel
Software Mentions: 1
Published: almost 15 years ago

10.12688/wellcomeopenres.15126.2

Variant calling on the GRCh38 assembly with the data from phase three of the 1000 Genomes Project
Cited by: 62
Author(s): Ernesto Lowy-Gallego, Susan Fairley, Xiangqun Zheng-Bradley, Magali Ruffier, Laura Clarke, Paul Flicek
Software Mentions: 1
Published: over 6 years ago

10.1186/s42492-019-0040-7

Painting image browser applying an associate-rule-aware multidimensional data visualization technique
Cited by: 3
Author(s): Ayaka Kaneko, Akiko Komatsu, Takayuki Itoh, Florence Ying Wang
Software Mentions: 1
Published: over 6 years ago

10.3390/v9080210

Viral Ubiquitin Ligase Stimulates Selective Host MicroRNA Expression by Targeting ZEB Transcriptional Repressors
Cited by: 13
Author(s): Gabriel Lutz, Igor Jurak, Eui‐Tae Kim, Ju Youn Kim, Michael Hackenberg, Andrew M. Leader, Michelle L. Stoller, Donna M. Fekete, Matthew D. Weitzman, Donald M. Coen, Angus C. Wilson
Software Mentions: 1
Published: about 9 years ago

10.3390/v9040080

Protein-Coding Genes’ Retrocopies and Their Functions
Cited by: 56
Author(s): Magdalena Regina Kubiak, Izabela Makałowska
Software Mentions: 1
Published: over 9 years ago

10.7554/eLife.29510

Genomic regions controlling shape variation in the first upper molar of the house mouse
Cited by: 6
Author(s): Luisa F. Pallares, Ronan Ledevin, Sophie Pantalacci, Leslie M. Turner, Eiríkur Steingrímsson, Sabrina Renaud
Software Mentions: 1
Published: almost 9 years ago

10.3390/v5030998

Discovering Host Genes Involved in the Infection by the Tomato Yellow Leaf Curl Virus Complex and in the Establishment of Resistance to the Virus Using Tobacco Rattle Virus-based Post Transcriptional Gene Silencing
Cited by: 37
Author(s): Henryk Czosnek, Assaf Eybishtz, Dagan Sade, Rena Gorovits, Iris Sobol, Eduardo R. Bejarano, Tábata Rosas-Díaz, Rosa Lozano‐Durán
Software Mentions: 1
Published: over 13 years ago

10.1016/j.virol.2015.10.026

Rabbit CD200R binds host CD200 but not CD200-like proteins from poxviruses
Cited by: 10
Author(s): Munir Akkaya, L.S. Kwong, Erdem Akkaya, Deborah Hatherley, A. Neil Barclay
Software Mentions: 1
Published: over 10 years ago

10.1186/s12985-018-0922-x

MicroRNA transcriptome analysis of porcine vital organ responses to immunosuppressive porcine cytomegalovirus infection
Cited by: 7
Author(s): Xiao Liu, Haoche Wei, Shan Liao, Jian‐Heng Ye, Ling Zhu, Zhinan Xu
Software Mentions: 1
Published: over 8 years ago

10.1186/1743-422X-10-73

Cellular phosphoinositides and the maturation of bluetongue virus, a non-enveloped capsid virus
Cited by: 10
Author(s): Bishnupriya Bhattacharya, Polly Roy
Software Mentions: 1
Published: over 13 years ago

10.1186/1743-422X-7-262

Genome-wide analysis of host-chromosome binding sites for Epstein-Barr Virus Nuclear Antigen 1 (EBNA1)
Cited by: 74
Author(s): Fang Lü, Priyankara Wikramasinghe, Julie Norseen, Kevin Tsai, Pu Wang, Louise C. Showe, Ramana V. Davuluri, Paul M. Lieberman
Software Mentions: 1
Published: almost 16 years ago

10.7554/eLife.24139

Poly(A) tail length regulates PABPC1 expression to tune translation in the heart
Cited by: 57
Author(s): Sandip Chorghade, Joseph Seimetz, Russell Emmons, Jing Yang, Stefan Bresson, Michael De Lisio, Gianni Parise, Nicholas K. Conrad, Auinash Kalsotra
Software Mentions: 1
Published: about 9 years ago

10.3390/ijms21124540

Understanding the Biology of Human Interstitial Cells of Cajal in Gastrointestinal Motility
Cited by: 44
Author(s): Daphne Foong, Jerry Zhou, Ali Zarrouk, Vincent Ho, Michael D. O’Connor
Software Mentions: 1
Published: about 6 years ago

10.1186/s13229-017-0171-7

Critical region within 22q11.2 linked to higher rate of autism spectrum disorder
Cited by: 31
Author(s): Caitlin C. Clements, Tara L. Wenger, Alisa Zoltowski, Jennifer R. Bertollo, Judith S. Miller, Ashley de Marchena, Lauren Mitteer, John C. Carey, Benjamin E. Yerys, Elaine H. Zackai, Beverly S. Emanuel, Donna M. McDonald‐McGinn
Software Mentions: 1
Published: almost 9 years ago

10.1186/s11689-015-9122-9

CNTN6 copy number variations in 14 patients: a possible candidate gene for neurodevelopmental and neuropsychiatric disorders
Cited by: 63
Author(s): Jie Hu, Jun Liao, Malini Sathanoori, Sally J. Kochmar, Jessica Sebastian, Svetlana A. Yatsenko, Urvashi Surti
Software Mentions: 1
Published: about 11 years ago

10.1186/s13567-016-0363-8

Chicken interferome: avian interferon-stimulated genes identified by microarray and RNA-seq of primary chick embryo fibroblasts treated with a chicken type I interferon (IFN-α)
Cited by: 38
Author(s): Efstathios S. Giotis, Rebecca Robey, Natalie G. Skinner, Christopher Tomlinson, Stephen Goodbourn, Michael A. Skinner
Software Mentions: 1
Published: about 10 years ago

10.1016/j.omto.2021.05.013

METTL3 increases cisplatin chemosensitivity of cervical cancer cells via downregulation of the activity of RAGE
Cited by: 16
Author(s): Ruyi Li, Yizuo Song, Xin Chen, Maoping Chu, Zhi-wei Wang, Xueqiong Zhu
Software Mentions: 1
Published: about 5 years ago

10.1038/mtm.2014.55

Pigtailed macaques as a model to study long-term safety of lentivirus vector-mediated gene therapy for hemoglobinopathies
Cited by: 11
Author(s): Hans–Peter Kiem, Paritha Arumugam, Christopher R. Burtner, Catherine Fox, Brian C. Beard, Phillip Dexheimer, Jennifer E. Adair, Punam Malik
Software Mentions: 1
Published: over 12 years ago

10.7554/eLife.56205

The ribosomal RNA m5C methyltransferase NSUN-1 modulates healthspan and oogenesis in Caenorhabditis elegans
Cited by: 26
Author(s): Clemens Heissenberger, Jarod Rollins, Teresa L. Krammer, Fabian Nagelreiter, Isabella Stocker, Ludivine Wacheul, Anton Shpylovyi, Koray Tav, Santina Snow, Johannes Grillari, Aric N. Rogers, Denis L. J. Lafontaine, Markus Schosserer
Software Mentions: 1
Published: almost 6 years ago

10.1038/mp.2013.68

708 Common and 2010 rare DISC1 locus variants identified in 1542 subjects: analysis for association with psychiatric disorder and cognitive traits
Cited by: 52
Author(s): Pippa A. Thomson, Jennifer Parla, Allan F. McRae, Melissa Kramer, Kamna Ramakrishnan, Jingjing Yao, Dinesh C. Soares, Shane McCarthy, Stewart W. Morris, Lorna Cardone, Stephen P. Cass, Elena Ghiban, William Hennah, Kathryn Evans, Daniella Rebolini, J. Kirsty Millar, Sarah E. Harris, John M. Starr, Donald J. MacIntyre, Andrew M. McIntosh, James D. Watson, Ian J. Deary, Peter M. Visscher, Douglas Blackwood, W. Richard McCombie, David J. Porteous
Software Mentions: 1
Published: over 13 years ago

10.1016/j.celrep.2017.05.005

RUNX1-ETO and RUNX1-EVI1 Differentially Reprogram the Chromatin Landscape in t(8;21) and t(3;21) AML
Cited by: 42
Author(s): Justin Loke, Salam A. Assi, Maria Rosaria Imperato, Anetta Ptasińska, Pierre Cauchy, Yura Grabovska, N Martinez Soria, Manoj Raghavan, H.R. Delwel, Peter N. Cockerill, Olaf Heidenreich, Constanze Bonifer
Software Mentions: 1
Published: over 9 years ago

10.1007/s00018-017-2580-3

Expression of a SOX1 overlapping transcript in neural differentiation and cancer models
Cited by: 21
Author(s): Azaz Ahmad, Stephanie Strohbuecker, Cristina Tufarelli, Virginie Sottile
Software Mentions: 1
Published: about 9 years ago

10.1016/j.chom.2018.01.008

Comparative Heterochromatin Profiling Reveals Conserved and Unique Epigenome Signatures Linked to Adaptation and Development of Malaria Parasites
Cited by: 92
Author(s): Sabine Anne‐Kristin Fraschka, Michael Filarsky, Regina Hoo, Igor Niederwieser, Xue Yan Yam, Nicolas M. B. Brancucci, Franziska Mohring, Annals Tatenda Mushunje, Xiucai Huang, Peter Christensen, François Nosten, Zbynek Bozdech, Bruce Russell, Robert W. Moon, Matthias Marti, Peter R. Preiser, Richárd Bártfai, Till S. Voss
Software Mentions: 1
Published: over 8 years ago

10.1038/s41421-018-0051-0

A growth factor-free culture system underscores the coordination between Wnt and BMP signaling in Lgr5+ intestinal stem cell maintenance
Cited by: 39
Author(s): Yehua Li, Yuan Liu, Bofeng Liu, Jilian Wang, Shuangqing Wei, Zhengjian Qi, Shan Wang, Wei Fu, Ye-Guang Chen
Software Mentions: 1
Published: about 8 years ago

10.1038/celldisc.2017.35

Methylation of transcription factor YY2 regulates its transcriptional activity and cell proliferation
Cited by: 27
Author(s): Xiaonan Wu, Tao-tao Shi, Yaohui He, Feifei Wang, Rui Sang, Jian Ding, Wen‐juan Zhang, Xing-yi Shu, Hai‐feng Shen, Yi Jia, Xiang Gao, Wen Liu
Software Mentions: 1
Published: almost 9 years ago

10.3390/ijms21186808

High-Temperature-Responsive Poplar lncRNAs Modulate Target Gene Expression via RNA Interference and Act as RNA Scaffolds to Enhance Heat Tolerance
Cited by: 10
Author(s): Yuepeng Song, Panfei Chen, Peng Liu, Chenhao Bu, Deqiang Zhang
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41380-019-0440-2

Circadian glucocorticoid oscillations preserve a population of adult hippocampal neural stem cells in the aging brain
Cited by: 48
Author(s): Marijn Schouten, Pascal Bielefeld, Laura García-Corzo, Emma M.J. Passchier, Simona Gradari, Tassilo Jungenitz, Meritxell Pons-Espinal, Elias Gebara, Soraya Martín‐Suárez, Paul J. Lucassen, Helga E. de Vries, José Luís Trejo, Stephan W. Schwarzacher, Davide De Pietri Tonelli, Nicolas Toni, Helena Mira, Juan M. Encinas, Carlos P. Fitzsimons
Software Mentions: 1
Published: about 7 years ago

10.1038/s41420-020-00359-y

Oncogenic role of lncRNA CRNDE in acute promyelocytic leukemia and NPM1-mutant acute myeloid leukemia
Cited by: 9
Author(s): Xuefei Ma, Wei Zhang, Ming Zhao, Shufen Li, Ji Wen, Kankan Wang
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41380-019-0561-7

The Netrin-1/DCC guidance system: dopamine pathway maturation and psychiatric disorders emerging in adolescence
Cited by: 53
Author(s): Daniel E. Vosberg, Marco Leyton, Cecilia Flores
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41419-021-03480-7

BMP2-dependent gene regulatory network analysis reveals Klf4 as a novel transcription factor of osteoblast differentiation
Cited by: 16
Author(s): Shuaitong Yu, Jian Guo, Zheyi Sun, Chujiao Lin, Huangheng Tao, Qian Zhang, Yu Cui, Huanyan Zuo, Yuxiu Lin, Shuo Chen, Huan Liu, Zhi Chen
Software Mentions: 1
Published: over 5 years ago

10.1016/j.stem.2012.06.008

Esrrb Is a Pivotal Target of the Gsk3/Tcf3 Axis Regulating Embryonic Stem Cell Self-Renewal
Cited by: 347
Author(s): Graziano Martello, Toshimi Sugimoto, Evangelia Diamanti, Anagha Joshi, Rebecca Hannah, Satoshi Ohtsuka, Berthold Göttgens, Hitoshi Niwa, Austin Smith
Software Mentions: 1
Published: almost 14 years ago

10.1038/s41419-018-0472-6

Long non-coding RNA MUC5B-AS1 promotes metastasis through mutually regulating MUC5B expression in lung adenocarcinoma
Cited by: 45
Author(s): Shuai Yuan, Qingyun Liu, Zhangxue Hu, Zhengyu Zhou, Guilu Wang, Chengying Li, Wenting Xie, Gang Ma, Ying Xiang, Na Wu, Long Wu, Zhengping Yu, Bai Li, Yafei Li
Software Mentions: 1
Published: over 8 years ago

10.1038/s41419-018-0495-z

DNA methylation, through DNMT1, has an essential role in the development of gastrointestinal smooth muscle cells and disease
Cited by: 19
Author(s): Brian G. Jorgensen, Robyn M. Berent, Se Eun Ha, Kotaro Horiguchi, Kent C. Sasse, Laren Becker, Seungil Ro
Software Mentions: 1
Published: over 8 years ago

10.1038/cddis.2016.278

BNC2 is a putative tumor suppressor gene in high-grade serous ovarian carcinoma and impacts cell survival after oxidative stress
Cited by: 14
Author(s): Laura Cesaratto, Eleonora Grisard, Michela Coan, Lorenzo Zandonà, Elena De Mattia, Elena Poletto, Erika Cecchin, Fabio Puglisi, Vincenzo Canzonieri, Maria Teresa Mucignat, Antonella Zucchetto, Gabriele Stocco, Alfonso Colombatti, Milena S. Nicoloso, Riccardo Spizzo
Software Mentions: 1
Published: almost 10 years ago

10.3390/cells9030711

miR-7 Controls the Dopaminergic/Oligodendroglial Fate through Wnt/β-catenin Signaling Regulation
Cited by: 17
Author(s): Lavanya Adusumilli, Nicola Facchinello, Cathleen Teh, Giorgia Busolin, Minh Tn Le, Henry Yang, Giorgia Beffagna, Stefano Campanaro, Wai Leong Tam, Francesco Argenton, Bing Lim, Vladimir Korzh, Natascia Tiso
Software Mentions: 1
Published: over 6 years ago

10.1038/cddis.2017.241

Mitochondrial AKAP1 supports mTOR pathway and tumor growth
Cited by: 40
Author(s): Laura Rinaldi, Maria Sepe, Rossella Delle Donne, Kristel Conte, Antonietta Arcella, Domenica Borzacchiello, Stefano Amente, Fernanda De Vita, Monia Porpora, Corrado Garbi, Maria Antonietta Oliva, Claudio Procaccini, Deriggio Faicchia, Giuseppe Matarese, Federica Zito Marino, Gaetano Rocco, Sara Pignatiello, Renato Franco, Luigi Insabato, Barbara Majello, Antonio Feliciello
Software Mentions: 1
Published: over 9 years ago

10.3390/cells9102149

In Vitro Studies to Define the Cell-Surface and Intracellular Targets of Polyarginine-Conjugated Sodium Borocaptate as a Potential Delivery Agent for Boron Neutron Capture Therapy
Cited by: 17
Author(s): Akiko Fujimura, Seiji Yasui, Kazuyo Igawa, Atsushi Ueda, K. Watanabe, Tadashi Hanafusa, Ichikawa Yasuaki, Sachiko Yoshihashi, Koji Tsuchida, Atsunori Kamiya, Shinichi Furuya
Software Mentions: 1
Published: almost 6 years ago

10.3390/cells6030021

Studying Autophagy in Zebrafish
Cited by: 48
Author(s): Benan John Mathai, Annemarie H. Meijer, Anne Simonsen
Software Mentions: 1
Published: about 9 years ago

10.3390/cells10010094

Context Matters: NOTCH Signatures and Pathway in Cancer Progression and Metastasis
Cited by: 43
Author(s): Julia O. Misiorek, Alicja Przybyszewska-Podstawka, Joanna Kałafut, Beata Paziewska, Katarzyna Rolle, Adolfo Rivero-Müller, Matthias Nees
Software Mentions: 1
Published: over 5 years ago

10.7554/eLife.65952

Naa12 compensates for Naa10 in mice in the amino-terminal acetylation pathway
Cited by: 6
Author(s): Hyae Yon Kweon, Mi-Ni Lee, Max J. Dörfel, Seungwoon Seo, Leah Gottlieb, Thomas Papazyan, Nina McTiernan, Rasmus Ree, David Bolton, Andrew Garcia, Michael Flory, Jonathan Crain, Alison Sebold, Scott K. Lyons, Ahmed Ismail, Elaine Marchi, Seongkeun Sonn, Se‐Jin Jeong, Sejin Jeon, Shinyeong Ju, Simon J. Conway, Taesoo Kim, Hyun‐Seok Kim, Cheolju Lee, Tae-Young Roh, Thomas Arnesen, Ronen Marmorstein, Goo Taeg Oh, Gholson J. Lyon
Software Mentions: 1
Published: about 5 years ago

10.3390/cells8080908

Myeloid Krüppel-Like Factor 2 Critically Regulates K/BxN Serum-Induced Arthritis
Cited by: 11
Author(s): Manjusri Das, Moonmoon Deb, Dipranjan Laha, Matthew Joseph, Kanji Sugita, Rashmi Aggarwal, O. Hans Iwenofu, Vincent J. Pompili, Wael Jarjour, Hiranmoy Das
Software Mentions: 1
Published: about 7 years ago

10.3390/cells8111360

HOXA9 Transcriptionally Promotes Apoptosis and Represses Autophagy by Targeting NF-κB in Cutaneous Squamous Cell Carcinoma
Cited by: 21
Author(s): Shuo Han, Li Xue, Xiaoting Liang, Liang Zhou
Software Mentions: 1
Published: almost 7 years ago

10.3390/cells9030789

The Switch from NF-YAl to NF-YAs Isoform Impairs Myotubes Formation
Cited by: 9
Author(s): Debora Libetti, Andrea Bernardini, Sarah Sertic, Graziella Messina, Diletta Dolfini, Roberto Mantovani
Software Mentions: 1
Published: over 6 years ago

10.3390/cells8080778

Exposure to Ionizing Radiation Triggers Prolonged Changes in Circular RNA Abundance in the Embryonic Mouse Brain and Primary Neurons
Cited by: 15
Author(s): André Claude Mbouombouo Mfossa, Helene Thekkekara Puthenparampil, Auchi Inalegwu, Amelie Coolkens, Sarah Baatout, Mohammed Abderrafi Benotmane, Danny Huylebroeck, Roel Quintens
Software Mentions: 1
Published: about 7 years ago

10.3390/cells9020474

RNA-Guided Genomic Localization of H2A.L.2 Histone Variant
Cited by: 10
Author(s): Naghmeh Hoghoughi, Sophie Barral, Sandrine Curtet, Florent Chuffart, Guillaume Charbonnier, Denis Puthier, T. Buchou, Sophie Rousseaux, Saadi Khochbin
Software Mentions: 1
Published: over 6 years ago

10.3390/cells9041061

Modification of Adenosine196 by Mettl3 Methyltransferase in the 5’-External Transcribed Spacer of 47S Pre-rRNA Affects rRNA Maturation
Cited by: 10
Author(s): Olga V. Sergeeva, Philipp Sergeev, Pavel Melnikov, Tatiana Prikazchikova, Olga А. Dontsova, Timofei S. Zatsepin
Software Mentions: 1
Published: over 6 years ago

10.1038/s41380-018-0210-6

Identification of ADHD risk genes in extended pedigrees by combining linkage analysis and whole-exome sequencing
Cited by: 15
Author(s): Jordi Corominas, Marieke Klein, Tetyana Zayats, Olga Rivero, Georg C. Ziegler, Marc Pauper, Kornelia Neveling, Geert Poelmans, Charline Jansch, Evgeniy Svirin, Julia Geißler, Heike Weber, Andreas Reif, Alejandro Arias Vásquez, Tessel E. Galesloot, Lambertus A. Kiemeney, Jan K. Buitelaar, Josep Antoni Ramos-Quiroga, Bru Cormand, Marta Ribasés, Kristian Hveem, Maiken Elvestad Gabrielsen, Per Hoffmann, Sven Cichon, Jan Haavik, Stefan Johansson, Christian Jacob, Marcel Romanos, Barbara Franke, Klaus‐Peter Lesch
Software Mentions: 1
Published: about 8 years ago

10.1186/s12998-018-0191-1

The prevalence of the term subluxation in chiropractic degree program curricula throughout the world
Cited by: 18
Author(s): Matthew F. Funk, Aric J. Frisina-Deyo, Timothy A. Mirtz, Stephen M. Perle
Software Mentions: 1
Published: about 8 years ago

10.1038/s41419-021-03763-z

RNA m6A reader YTHDF2 facilitates lung adenocarcinoma cell proliferation and metastasis by targeting the AXIN1/Wnt/β-catenin signaling
Cited by: 50
Author(s): Yin Li, Hao Sheng, Feng Ma, Qiang Wu, Jianfang Huang, Qiang Chen, Lianghe Sheng, Xinghai Zhu, Xianfang Zhu, Meng Xu
Software Mentions: 1
Published: over 5 years ago

10.1002/ccr3.2509

Second‐trimester prenatal diagnosis of Nager syndrome with a deletion including <i>SF3B4</i> detected by chromosomal microarray
Cited by: 5
Author(s): Małgorzata Drożniewska, Mark D. Kilby, Julie Vogt, Fiona S. Togneri, E Quinlan-Jones, Lisa Reali, Stephanie Allen, Dominic McMullan
Software Mentions: 1
Published: over 6 years ago

10.1186/1868-7083-4-24

Evidence for transcript-specific epigenetic regulation of glucocorticoid-stimulated skeletal muscle 11β-hydroxysteroid dehydrogenase-1 activity in type 2 diabetes
Cited by: 4
Author(s): Warrick J. Inder, Varuni R. Obeyesekere, Choon‐Gon Jang, Richard Saffery
Software Mentions: 1
Published: almost 14 years ago

10.7554/eLife.10575

Mitochondrial dysfunction remodels one-carbon metabolism in human cells
Cited by: 267
Author(s): Xiaoyan Bao, Shao En Ong, Olga Goldberger, Jun Peng, Rohit Sharma, Dawn Thompson, Scott B. Vafai, Andrew G. Cox, Eizo Marutani, Fumito Ichinose, Wolfram Goessling, Aviv Regev, Steven A. Carr, Clary B. Clish, Vamsi K. Mootha
Software Mentions: 1
Published: over 10 years ago

10.1186/2040-2392-5-5

Identification of rare DNA sequence variants in high-risk autism families and their prevalence in a large case/control population
Cited by: 32
Author(s): Nori Matsunami, Charles H. Hensel, Lisa Baird, Jeff Stevens, Brith Otterud, Tami Leppert, Tena Varvil, Dexter Hadley, Joseph T. Glessner, Renata Pellegrino, Cecilia Kim, Kelly Thomas, Fengxiang Wang, F. George Otieno, Karen S. Ho, G. Bryce Christensen, Dongying Li, Rytis Prekeris, Christophe G Lambert, Hákon Hákonarson, M. Leppert
Software Mentions: 1
Published: over 12 years ago

10.1038/s41419-021-03411-6

HOXB4 inhibits the proliferation and tumorigenesis of cervical cancer cells by downregulating the activity of Wnt/β-catenin signaling pathway
Cited by: 14
Author(s): Dan Lei, Wenting Yang, Pan Zheng
Software Mentions: 1
Published: over 5 years ago

10.1038/cddis.2016.319

Transactivation of TrkB by Sigma-1 receptor mediates cocaine-induced changes in dendritic spine density and morphology in hippocampal and cortical neurons
Cited by: 29
Author(s): Minhan Ka, Yeon Hee Kook, Ke Liao, Shilpa Buch, Woo Yang Kim
Software Mentions: 1
Published: almost 10 years ago

10.1186/s13148-018-0484-1

GLI2 promoter hypermethylation in saliva of children with a respiratory allergy
Cited by: 16
Author(s): Sabine A. S. Langie, Matthieu Moisse, Katarzyna Szarc vel Szic, Ellen van der Plas, Gudrun Koppen, Sofie De Prins, Tijs Louwies, Vera Nelen, Guy Van Camp, Diether Lambrechts, Greet Schoeters, Wim Vanden Berghe, Patrick De Boever
Software Mentions: 1
Published: over 8 years ago

10.1038/s41418-019-0288-7

MALAT1-KTN1-EGFR regulatory axis promotes the development of cutaneous squamous cell carcinoma
Cited by: 38
Author(s): Ying Zhang, Lin Gao, Shudong Ma, Ji Ma, Yinghui Wang, Shanshan Li, Xia Hu, Shuo Han, Meijuan Zhou, Liang Zhou, Zhenhua Ding
Software Mentions: 1
Published: over 7 years ago

10.1186/s13148-020-00960-z

Changes in DNA methylation profiles of myalgic encephalomyelitis/chronic fatigue syndrome patients reflect systemic dysfunctions
Cited by: 22
Author(s): Amber Helliwell, Eiren Sweetman, Peter A. Stockwell, Christina D. Edgar, Aniruddha Chatterjee, Warren P. Tate
Software Mentions: 1
Published: almost 6 years ago

10.1007/s12035-018-1444-7

FOXG1 Regulates PRKAR2B Transcriptionally and Posttranscriptionally via miR200 in the Adult Hippocampus
Cited by: 18
Author(s): Stefan Weise, G Arumugam, Alejandro Villarreal, Pavankumar Videm, Stefanie Heidrich, Nils Nebel, Verónica I. Dumit, Farahnaz Sananbenesi, Viktoria Reimann, Madeline Craske, Oliver Schilling, Wolfgang R. Hess, André Fischer, Rolf Backofen, Tanja Vogel
Software Mentions: 1
Published: almost 8 years ago

10.1186/s13148-017-0366-y

Regulating role of fetal thyroid hormones on placental mitochondrial DNA methylation: epidemiological evidence from the ENVIRONAGE birth cohort study
Cited by: 19
Author(s): Bram G. Janssen, Hyang‐Min Byun, Harry Roels, Wilfried Gyselaers, Joris Penders, Andrea A. Baccarelli, Tim S. Nawrot
Software Mentions: 1
Published: about 9 years ago

10.3390/cancers4041180

Annotating Cancer Variants and Anti-Cancer Therapeutics in Reactome
Cited by: 257
Author(s): Marija Milacic, Robin Haw, Karen Rothfels, Guanming Wu, David Croft, Henning Hermjakob, Peter D’Eustachio, Lincoln Stein
Software Mentions: 1
Published: almost 14 years ago

10.1186/s13148-016-0254-x

Identification of a methylation profile for DNMT1-associated autosomal dominant cerebellar ataxia, deafness, and narcolepsy
Cited by: 61
Author(s): Kristin D. Kernohan, Laila C. Schenkel, Lijia Huang, Amanda Smith, Guillaume Paré, Peter Ainsworth, Kym M. Boycott, Jodi Warman‐Chardon, Bekim Sadiković
Software Mentions: 1
Published: about 10 years ago

10.3390/cancers5030998

The Interactions of microRNA and Epigenetic Modifications in Prostate Cancer
Cited by: 31
Author(s): Prashant Singh, Moray J. Campbell
Software Mentions: 1
Published: about 13 years ago

10.1186/s13148-016-0190-9

MSRE-HTPrimer: a high-throughput and genome-wide primer design pipeline optimized for epigenetic research
Cited by: 6
Author(s): Ram Vinay Pandey, Walter Pulverer, Rainer Kallmeyer, Gabriel Beikircher, Stephan Pabinger, Albert Kriegner, Andreas Weinhäusel
Software Mentions: 1
Published: over 10 years ago

10.3390/cancers13092207

TET2 Inhibits PD-L1 Gene Expression in Breast Cancer Cells through Histone Deacetylation
Cited by: 15
Author(s): Yinghui Shen, Lu Liu, Mengyuan Wang, Bo Xu, Ruitu Lyu, Yujiang Geno Shi, Li Tan
Software Mentions: 1
Published: over 5 years ago

10.1002/mgg3.61

<i><scp>CTSC</scp></i>and Papillon–Lefèvre syndrome: detection of recurrent mutations in<scp>H</scp>ungarian patients, a review of published variants and database update
Cited by: 47
Author(s): Nikoletta Nagy, Péter Vályi, Zsanett Csoma, Adrienn Sulák, Kornélia Tripolszki, Katalin Farkas, Ekaterine Paschali, Ferenc Papp, László Tóth, Beáta Fábos, Lajos Kemény, Katalin Nagy, Márta Széll
Software Mentions: 1
Published: over 12 years ago

10.3390/cancers12030661

Characterization of Human NK Cell-Derived Exosomes: Role of DNAM1 Receptor in Exosome-Mediated Cytotoxicity against Tumor
Cited by: 89
Author(s): Anna Pace, Nicola Tumino, Francesca Besi, Claudia Alicata, Libenzio Adrian Conti, Enrico Munari, Enrico Maggi, Paola Vacca, Alessandro Moretta
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0165694

The Conserved Dcw Gene Cluster of R. sphaeroides Is Preceded by an Uncommonly Extended 5’ Leader Featuring the sRNA UpsM
Cited by: 17
Author(s): Lennart Weber, Clemens Thoelken, Marcel Volk, Bernhard Remes, Marcus Lechner, Gabriele Klug
Software Mentions: 1
Published: almost 10 years ago

10.1186/s40885-017-0069-x

Association of angiotensinogen gene SNPs and haplotypes with risk of hypertension in eastern Indian population
Cited by: 26
Author(s): Pulakes Purkait, K. C. Halder, Parimalam Kumar, Anwesha Roy, Pradip Raychaudhuri, S Bhattacharya, Biswanath Sarkar, J. M. Naidu
Software Mentions: 1
Published: over 9 years ago

10.1186/1559-0275-11-5

Proteogenomic analysis of pathogenic yeast Cryptococcus neoformans using high resolution mass spectrometry
Cited by: 18
Author(s): Lakshmi Dhevi N. Selvan, Jyothi Embekkat Kaviyil, Raja Sekhar Nirujogi, Babylakshmi Muthusamy, Vinuth N Puttamallesh, Tejaswini Subbannayya, Nazia Syed, Aneesha Radhakrishnan, Dhanashree S. Kelkar, Sartaj Ahmad, Sneha M. Pinto, Praveen Kumar, Anil K. Madugundu, Bipin Nair, Aditi Chatterjee, Akhilesh Pandey, Raju Ravikumar, Harsha Gowda, T. S. Keshava Prasad
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0049570

The CREB-miR-9 Negative Feedback Minicircuitry Coordinates the Migration and Proliferation of Glioma Cells
Cited by: 81
Author(s): Xiaochao Tan, Shan Wang, Bin Yang, Liyuan Zhu, Bin Yin, Tengfei Chao, Jizong Zhao, Jing Yuan, Boqin Qiang, Xiaozhong Peng
Software Mentions: 1
Published: almost 14 years ago

10.1371/journal.pone.0207984

Leucine rich repeat kinase 2 (LRRK2) GLY2019SER mutation is absent in a second cohort of Nigerian Africans with Parkinson disease
Cited by: 16
Author(s): Njideka Okubadejo, Mie Rizig, Oluwadamilola O. Ojo, Hallgeir Jonvik, Olajumoke Oshinaike, Emmeline Brown, Henry Houlden
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0000658

A Unique Role for Nonmuscle Myosin Heavy Chain IIA in Regulation of Epithelial Apical Junctions
Cited by: 144
Author(s): Andrei I. Ivanov, Moshe Bachar, Brian A. Babbin, Robert S. Adelstein, Asma Nusrat, Charles A. Parkos
Software Mentions: 1
Published: about 19 years ago

10.1155/2011/910769

The Influence of 3′UTRs on MicroRNA Function Inferred from Human SNP Data
Cited by: 29
Author(s): Zihua Hu, Andrew E. Bruno
Software Mentions: 1
Published: over 15 years ago

10.1371/journal.pone.0153333

Neofunctionalization of Chromoplast Specific Lycopene Beta Cyclase Gene (CYC-B) in Tomato Clade
Cited by: 13
Author(s): Vijee Mohan, Arun K. Pandey, Yellamaraju Sreelakshmi, Rameshwar Sharma
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0108652

Genome-Wide Mapping of Yeast Histone Chaperone Anti-Silencing Function 1 Reveals Its Role in Condensin Binding with Chromatin
Cited by: 7
Author(s): Pooran Singh Dewari, Poonam Bhargava
Software Mentions: 1
Published: almost 12 years ago

10.1186/s13054-020-03146-4

The circular RNA landscape in specific peripheral blood mononuclear cells of critically ill patients with sepsis
Cited by: 9
Author(s): Hina Khan, Xanthe Brands, Simona Aufiero, Arie J. Hoogendijk, Augustijn M. Klarenbeek, Tjitske S. R. van Engelen, Bastiaan W. Haak, Lonneke A. van Vught, Janneke Horn, Marcus J. Schultz, Aeilko H. Zwinderman, Tom van der Poll, Brendon P. Scicluna
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0105723

Effects of GWAS-Associated Genetic Variants on lncRNAs within IBD and T1D Candidate Loci
Cited by: 69
Author(s): Aashiq H. Mirza, Simranjeet Kaur, Caroline Brorsson, Flemming Pociot
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0129811

A Novel Locus for Ectodermal Dysplasia of Hair, Nail and Skin Pigmentation Anomalies Maps to Chromosome 18p11.32-p11.31
Cited by: 2
Author(s): Rabia Habib, Muhammad Ansar, Manuel Mattheisen, Muhammad Shahid, Ghazanfar Ali, Wasim Ahmad, Regina C. Betz
Software Mentions: 1
Published: about 11 years ago

10.1016/j.ceb.2010.03.004

Genome architecture and the role of transcription
Cited by: 47
Author(s): Argyris Papantonis, Peter R. Cook
Software Mentions: 1
Published: over 16 years ago

10.1093/dnares/dsz006

Developmental atlas of the RNA editome in Sus scrofa skeletal muscle
Cited by: 15
Author(s): Yalan Yang, Min Zhu, Xinhao Fan, Yilong Yao, Junyu Yan, Yijie Tang, Siyuan Liu, Kui Li, Zhonglin Tang
Software Mentions: 1
Published: over 7 years ago

10.1093/dnares/dsv011

Whole-genome resequencing analyses of five pig breeds, including Korean wild and native, and three European origin breeds
Cited by: 50
Author(s): Jung‐Woo Choi, Won‐Hyong Chung, Kyung-Tai Lee, Eun Seok Cho, Si-Woo Lee, Bong-Hwan Choi, Sang‐Heon Lee, Won-Jun Lim, Dajeong Lim, Yun-Gyeong Lee, Joon-Ki Hong, Doo-Wan Kim, Hyeon-Jeong Jeon, Jiwoong Kim, Namshin Kim, Tae-Hun Kim
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0075344

Integration Profile and Safety of an Adenovirus Hybrid-Vector Utilizing Hyperactive Sleeping Beauty Transposase for Somatic Integration
Cited by: 33
Author(s): Wenli Zhang, Martin Mück-Häusl, Jichang Wang, Chuanbo Sun, Maren Gebbing, Csaba Miskey, Zoltán Ivics, Zsuzsanna Izsvák, Anja Ehrhardt
Software Mentions: 1
Published: almost 13 years ago

10.1016/j.dib.2017.05.050

Datasets on the genomic positions of the MLL1 morphemes, the ZFP57 binding site, and ZFBS-Morph overlaps in the build mm9 of the mouse genome
Cited by: 5
Author(s): Minou Bina, Phillip Wyss, Carol X. Song
Software Mentions: 1
Published: about 9 years ago

10.1016/j.dib.2016.02.053

Supporting data for characterization of non-coding RNAs associated with the Neuronal growth regulator 1 (NEGR1) adhesion protein
Cited by: 2
Author(s): Prameet Kaur, Jun Tan, Dwi Setyowati Karolina, Sugunavathi Sepramaniam, Arunmozhiarasi Armugam, Tsun-Hon Peter Wong, Kandiah Jeyaseelan
Software Mentions: 1
Published: over 10 years ago

10.1093/database/bat072

HTS-DB: an online resource to publish and query data from functional genomics high-throughput siRNA screening projects
Cited by: 1
Author(s): Rebecca E. Saunders, Rachael Instrell, Rossella Rispoli, Ming Jiang, Michael Howell
Software Mentions: 1
Published: over 13 years ago

10.1093/database/bat087

DBM-DB: the diamondback moth genome database
Cited by: 59
Author(s): Weiqi Tang, Liying Yu, Weiyi He, Yang Guang, Fushi Ke, Simon W. Baxter, Shijun You, Carl J. Douglas, Minsheng You
Software Mentions: 1
Published: over 12 years ago

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