Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: browser
https://packages.ecosyste.ms/registries/pypi.org/packages/browser
A package to prevent Dependency Confusion attacks against Yandex.
2 versions
Latest release: 12 months ago
2 dependent packages
Papers Mentioning browser 2,125
10.1038/srep39848
Microvasculature remodeling in the mouse lower gut during inflammagingCited by: 20
Author(s): Jae-Ho Jeong, KwangSoo Kim, Dukhwan Lim, Kun-Hee Kim, Hyung-Seok Kim, Sungsu Lee, Joo‐Hye Song, Byoung-Gon Moon, Hyon E. Choy, Sang Chul Park
Software Mentions: 1
Published: over 7 years ago
10.1038/srep43296
Glucocorticoid receptor positively regulates transcription of FNDC5 in the liverCited by: 28
Author(s): Hyoung Kyu Kim, Yu Jeong Jeong, In-Sung Song, Yeon Hee Noh, Kyo Won Seo, Min Kim, Jin Han
Software Mentions: 1
Published: about 7 years ago
10.1038/srep43605
A Core Regulatory Circuit in Glioblastoma Stem Cells Links MAPK Activation to a Transcriptional Program of Neural Stem Cell IdentityCited by: 19
Author(s): Gregory Riddick, Svetlana Kotliarova, Virginia Rodriguez, H. S. Kim, Amanda Linkous, Andrew J. Storaska, Susie Ahn, Jennifer Walling, Galina I. Belova, Howard A. Fine
Software Mentions: 1
Published: about 7 years ago
10.1038/srep43733
Heterozygous mutation of eEF1A1b resulted in spermatogenesis arrest and infertility in male tilapia, Oreochromis niloticusCited by: 27
Author(s): Jinlin Chen, Dongneng Jiang, Dejie Tan, Zheng Fan, Yingying Wei, Minghui Li, Deshou Wang
Software Mentions: 1
Published: about 7 years ago
10.1038/srep45338
Identification and comparative analysis of the epidermal differentiation complex in snakesCited by: 24
Author(s): Karin Brigit Holthaus, Veronika Mlitz, Bettina Strasser, Erwin Tschachler, Lorenzo Alibardi, Leopold Eckhart
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-017-15153-7
Identification of novel cis-regulatory elements of Eya1 in Xenopus laevis using BAC recombineeringCited by: 1
Author(s): Santosh Kumar Maharana, Nicolas Pollet, Gerhard Schlosser
Software Mentions: 1
Published: over 6 years ago
10.7554/eLife.01236
Global cellular response to chemotherapy-induced apoptosisCited by: 60
Author(s): Arun P. Wiita, Etay Ziv, Paul J. Wiita, Anatoly Urisman, Olivier Julien, Alma L. Burlingame, Jonathan S. Weissman, James A. Wells
Software Mentions: 1
Published: over 10 years ago
10.7554/eLife.44558
Decoys provide a scalable platform for the identification of plant E3 ubiquitin ligases that regulate circadian functionCited by: 23
Author(s): Ann Feke, Wei Liu, Jing Han Hong, Man-Wah Li, Chin-Mei Lee, Elton Zhou, Joshua M. Gendron
Software Mentions: 1
Published: about 5 years ago
10.7554/eLife.12059
Quantitative neuroanatomy for connectomics in DrosophilaCited by: 247
Author(s): Casey M Schneider-Mizell, Stephan Gerhard, Mark Longair, Tom Kazimiers, Feng Li, Maarten Zwart, Andrew Champion, Frank M. Midgley, Richard D. Fetter, Stephan Saalfeld, Albert Cardona
Software Mentions: 1
Published: about 8 years ago
10.7554/eLife.29510
Genomic regions controlling shape variation in the first upper molar of the house mouseCited by: 6
Author(s): Luisa F. Pallares, Ronan Ledevin, Sophie Pantalacci, Leslie M. Turner, Eiríkur Steingrímsson, Sabrina Renaud
Software Mentions: 1
Published: over 6 years ago
10.7554/eLife.24139
Poly(A) tail length regulates PABPC1 expression to tune translation in the heartCited by: 57
Author(s): Sandip Chorghade, Joseph Seimetz, Russell Emmons, Jing Yang, Stefan Bresson, Michael De Lisio, Gianni Parise, Nicholas K. Conrad, Auinash Kalsotra
Software Mentions: 1
Published: almost 7 years ago
10.7554/eLife.56205
The ribosomal RNA m5C methyltransferase NSUN-1 modulates healthspan and oogenesis in Caenorhabditis elegansCited by: 26
Author(s): Clemens Heissenberger, Jarod Rollins, Teresa L. Krammer, Fabian Nagelreiter, Isabella Stocker, Ludivine Wacheul, Anton Shpylovyi, Koray Tav, Santina Snow, Johannes Grillari, Aric N. Rogers, Denis L. J. Lafontaine, Markus Schosserer
Software Mentions: 1
Published: over 3 years ago
10.7554/eLife.65952
Naa12 compensates for Naa10 in mice in the amino-terminal acetylation pathwayCited by: 6
Author(s): Hyae Yon Kweon, Mi-Ni Lee, Max J. Dörfel, Seungwoon Seo, Leah Gottlieb, Thomas Papazyan, Nina McTiernan, Rasmus Ree, David Bolton, Andrew Garcia, Michael Flory, Jonathan Crain, Alison Sebold, Scott K. Lyons, Ahmed Ismail, Elaine Marchi, Seongkeun Sonn, Se‐Jin Jeong, Sejin Jeon, Shinyeong Ju, Simon J. Conway, Taesoo Kim, Hyun‐Seok Kim, Cheolju Lee, Tae-Young Roh, Thomas Arnesen, Ronen Marmorstein, Goo Taeg Oh, Gholson J. Lyon
Software Mentions: 1
Published: almost 3 years ago
10.7554/eLife.10575
Mitochondrial dysfunction remodels one-carbon metabolism in human cellsCited by: 267
Author(s): Xiaoyan Bao, Shao En Ong, Olga Goldberger, Jun Peng, Rohit Sharma, Dawn Thompson, Scott B. Vafai, Andrew G. Cox, Eizo Marutani, Fumito Ichinose, Wolfram Goessling, Aviv Regev, Steven A. Carr, Clary B. Clish, Vamsi K. Mootha
Software Mentions: 1
Published: almost 8 years ago
10.7554/eLife.53165
Keratin 14-dependent disulfides regulate epidermal homeostasis and barrier function via 14-3-3σ and YAP1Cited by: 29
Author(s): Yajuan Guo, Catherine J. Redmond, Krystynne A Leacock, Margarita V. Brovkina, Suyun Ji, Vinod Jaskula-Ranga, Pierre A. Coulombe
Software Mentions: 1
Published: about 4 years ago
10.7554/eLife.43017
MYOD1 functions as a clock amplifier as well as a critical co-factor for downstream circadian gene expression in muscleCited by: 46
Author(s): Brian A. Hodge, Xiping Zhang, Miguel A. Gutiérrez-Monreal, Yi Cao, David W. Hammers, Zizhen Yao, Christopher A. Wolff, Ping Du, Denise Kemler, Andrew R. Judge, Karyn A. Esser
Software Mentions: 1
Published: about 5 years ago
10.7554/eLife.57679
The testis protein ZNF165 is a SMAD3 cofactor that coordinates oncogenic TGFβ signaling in triple-negative breast cancerCited by: 16
Author(s): Zane A. Gibbs, Luis C Reza, Chun‐Chia Cheng, Jill M. Westcott, Kathleen McGlynn, Angelique W. Whitehurst
Software Mentions: 1
Published: almost 4 years ago
10.7554/eLife.13024
Tissue damage drives co-localization of NF-κB, Smad3, and Nrf2 to direct Rev-erb sensitive wound repair in mouse macrophagesCited by: 61
Author(s): Dawn Z Eichenfield, Ty D. Troutman, Verena M. Link, Michael T. Lam, Han Cho, David Gosselin, Nathanael J. Spann, Hanna P. Lesch, Jenhan Tao, Jun Muto, Richard L. Gallo, Ronald M. Evans, Christopher K. Glass
Software Mentions: 1
Published: almost 8 years ago
10.7554/eLife.34410
Multi-view light-sheet imaging and tracking with the MaMuT software reveals the cell lineage of a direct developing arthropod limbCited by: 129
Author(s): Carsten Wolff, Jean-Yves Tinévez, Tobias Pietzsch, Evangelia Stamataki, Benjamin Harich, Léo Guignard, Stephan Preibisch, Spencer Shorte, Philipp J. Keller, Pavel Tomančák, Anastasios Pavlopoulos
Software Mentions: 1
Published: about 6 years ago
10.7554/eLife.38906
Recurrent loss of HMGCS2 shows that ketogenesis is not essential for the evolution of large mammalian brainsCited by: 31
Author(s): David Jebb, Michael Hiller
Software Mentions: 1
Published: over 5 years ago
10.7554/eLife.56383
Stem cell niche exit in C. elegans via orientation and segregation of daughter cells by a cryptic cell outside the nicheCited by: 21
Author(s): Kristie Gordon, Jay W Zussman, Xin Li, Camille Miller, David R. Sherwood
Software Mentions: 1
Published: almost 4 years ago
10.7554/eLife.23570
Functional mapping of yeast genomes by saturated transpositionCited by: 115
Author(s): Agnès H. Michel, Riko Hatakeyama, Philipp Kimmig, Meret Arter, Matthias Peter, Joao Matos, Claudio De Virgilio, Benoı̂t Kornmann
Software Mentions: 1
Published: about 7 years ago
10.7554/eLife.12089
Regulatory polymorphisms modulate the expression of HLA class II molecules and promote autoimmunityCited by: 102
Author(s): Prithvi Raj, Ekta Rai, Ran Song, Shaheen Khan, Benjamin Wakeland, Kasthuribai Viswanathan, Carlos Arana, Chao Liang, Bo Zhang, Igor Dozmorov, Ferdicia Carr-Johnson, Mitja Mitrovič, Graham B. Wiley, Jennifer A. Kelly, Bernard Lauwerys, Nancy J. Olsen, Chris Cotsapas, Christine Kim Garcia, Carol A. Wise, John B. Harley, Swapan K. Nath, Judith A. James, Chaim O. Jacob, Betty P. Tsao, Chandrashekhar Pasare, David R. Karp, Quan Zhen Li, Patrick M. Gaffney, Edward K. Wakeland
Software Mentions: 1
Published: over 8 years ago
10.7554/eLife.65041
Pervasive duplication of tumor suppressors in Afrotherians during the evolution of large bodies and reduced cancer riskCited by: 36
Author(s): Juan Manuel Vazquez, Vincent J. Lynch
Software Mentions: 1
Published: over 3 years ago