Projects: pypi: browser
https://packages.ecosyste.ms/registries/pypi.org/packages/browser
A package to prevent Dependency Confusion attacks against Yandex.
2 versions
Latest release: about 3 years ago
2 dependent packages
Enhanced Analysis
Repository Activity:
Repository Owner:
Francis Tseng (user)
(〜￣▽￣)〜☆ﾟ*･｡*･*･｡*･
(〜￣▽￣)〜☆ﾟ*･｡*･*･｡*･
Science Score: 65/100
Starting Score: 100 points
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem -
-15
No science keywords
No scientific terms found in keywords/classifiers -
-10
No science terms in description
No scientific terms found in description
Very Likely Science (65)
Papers Mentioning browser 2,125
10.1186/s12977-016-0277-6
Retrovirus Integration Database (RID): a public database for retroviral insertion sites into host genomesCited by: 36
Author(s): Wei Shao, Jigui Shan, Mary F. Kearney, Xiaolin Wu, Frank Maldarelli, John W. Mellors, Brian T. Luke, John M. Coffin, Stephen H. Hughes
Software Mentions: 1
Published: about 10 years ago
10.1186/s12977-016-0294-5
Proceedings of the Frontiers of Retrovirology Conference 2016Cited by: 2
Author(s): Irena Zurnic, Sylvia Hütter, Ute Lehmann, Nicole Stanke, Juliane Reh, Tobias Kern, Fabian Lindel, Gesche Gerresheim, Martin V. Hamann, Erik Müllers, Paul Lesbats, Peter Cherepanov, Erik Serrao, Alan Engelman, Dirk Lindemann, Claire da Silva Santos, Kévin Tartour, Andrea Cimarelli, Rya Burdick, Jianbo Chen, Jaya Sastri, Wei-Shau Hu, Vinay Kumar Pathak, Oliver T. Keppler, Karine Pradeau, Sylvia Eiler, Nicolas Lévy, Sarah Lennon, Sarah Cianférani, Stéphane Emiliani, Marc Ruff, Vincent Parissi, Sylvie Rato, Antonio Rausell, Miguel Luís López-Guadalupe Muñoz, Amalio Telenti, Angela Ciuffi, Alexander Zhyvoloup, Anat Melamed, I. G. Anderson, Delphine Planas, János Kriston-Vizi, Robin Ketteler, Chen Hsuin Lee, Andy Merritt, Petronela Ancuța, Charles R. M. Bangham, Ariberto Fassati, Anthony Rodari, Benoît Van Driessche, Mathilde Galais, Nadège Delacourt, Sylvain Fauquenoy, Caroline Vanhulle, Anna Kula, Arsène Burny, Olivier Rohr, Carine Van Lint, Thijs van Montfort, Renee van der Sluis, Dave Speijer, Ben Berkhout, Bo Meng, Andrzej Rutkowski, Neil Berry, Lars Dölken, Andrew Lever, Thomas Schuster, Benedikt Asbach, Ralf Wagner, Christine Groß, Veit Wiesmann, Katia Martina, Thomas Wittenberg, Jan Gettemans, Andrea K. Thoma-Kreß, Minghua Li, Eric O. Freed, Shan-Lu Liu, J.Y. Muller, Jan Münch, Xaver Sewald, Pradeep D. Uchil, Mark S. Ladinsky, Jagadish Beloor, Ruoxi Pi, Christin Herrmann, Nasim Motamedi, Thomas T. Murooka, Michael A. Brehm, Dale L. Greiner, Thorsten R. Mempel, Pamela J. Björkman, Priti Kumar, Walther Mothes, Simone Joas, Erica H. Parrish, Clement W. Gnanadurai, Edina Lump, Christina M. Stürzel, Nicholas F. Parrish, Ulrike Sauermann, Katharina Töpfer, Tina Schultheiss, Steven E. Bosinger, Guido Silvestri, Cristian Apetrei, N. Huot, Michaela Müller‐Trutwin, Daniel Sauter, Beatrice H. Hahn, Christiane Stahl–Hennig∥, Kirchhoff Frank, Gerald G. Schumann, Sabine Jung-Klawitter, Nina V. Fuchs, Kyle R. Upton, Martín Muñoz‐López, Ruchi Shukla, Jichang Wang, Marta García-Cañadas, Cesar Lopez‐Ruiz, Daniel J. Gerhardt, Attila Sebe, Ivana Grabundžija, Patricia Gerdes, Sylvia Merkert, Andrés Pulgarin, Anja Bock, Ulrike Held, Anett Witthuhn, Alexandra Haase, Ernst J. Wolvetang, Ulrich Martin, Zoltán Ivics, Zsuzsanna Izsvák, J.V. García-Pérez, Geoffrey J. Faulkner, T. H. Hurst, Aris Katzourakis, Gkikas Magiorkinis, Kerstin Schott, Rita Derua, Janna Seifried, Andreas Reuter, Heike Schmitz, Christiane Tondera, Alberto Brandariz-Núñez, Felipe Díaz-Griffero, Veerle Janssens, Renate König, Hanna‐Mari Baldauf, Lena Stegmann, Sarah-Marie Schwarz, Maud Trotard, Margarethe Martin, G.L. Lenzi, Manja Burggraf, Xiaoyu Pan, Oliver I. Fregoso, Efrem S. Lim, Libin Abraham, Elina Erikson, Laura Nguyen, Ina Ambiel, Frank Rutsch, Baek Kim, Michael Emerman, Oliver T. Fackler, Sabine Wittmann, Rayk Behrendt, Bianca Volkmann, Kristin Eissmann, Thomas Gramberg, Sebastian Bolduan, Herwig Koppensteiner, Stefanie Regensburg, Ruth Brack‐Werner, Rika Draenert, Michael Schindler, Aurélie Ducroux, Shuting Xu, Aparna Ponnurangam, Sergej Franz, Angelina Malassa, Ellen Ewald, Christine Goffinet, Sin‐Yee Fung, Ching-Ping Chan, Chun-Kit Yuen, Kin‐Hang Kok, Chin-Ping Chan, Dong-Yan Jin, Ulf Dittmer, Dorota Kmieć, Shilpa Iyer, Christina M. Stürzel, Beatrice H. Hahn, Yasuo Ariumi, Mariko Yasuda-Inoue, Koudai Kawano, Seiichiro Tateishi, Priscilla Turelli, Alex Compton, Nicolas Roy, Françoise Porrot, Anne Billet, Nicoletta Casartelli, Jacob S. Yount, Liang Chen, Oliver Schwartz, Carsten Magnus, Lucia Reh, Penny L. Moore, Therese Uhr, Jacqueline Weber, Lynn Morris, Alexandra Trkola, Rashel V. Grindberg, Erika Schlaepfer, Gideon Schreiber, Viviana Simon, Roberto F. Speck, Zeger Debyser, Lenard Vranckx, Jonas Demeulemeester, Suha Saleh, Eric Verdin, Anna Cereseto, Frauke Christ, Rik Gijsbers, Gang Wang, Ning Zhao, Atze T. Das, Josef Köstler, Beatriz Perdiguero, Mariano Estéban, Bertram L. Jacobs, David C. Montefiori, Celia C. LaBranche, Nicole L. Yates, Georgia D. Tomaras, Guido Ferrari, Kathryn E. Foulds, Mario Roederer, Gary Landucci, Donald N. Forthal, Michael S. Seaman, Natalie Hawkins, Steven G. Self, Sanjay Phogat, James Tartaglia, Susan W. Barnett, Brian Burke, Anthony D. Cristillo, Song Ding, Jonathan L. Heeney, Giuseppe Pantaleo, Viktoria Stab, Armin Ensser, Bettina Tippler, D. Jeff Burton, Matthias Tenbusch, Klaus Überla, Galit Alter, Giuseppe Lofano, Anne‐Sophie Dugast, Viraj Kulkarni, Todd J. Suscovich, Tatiana Opazo, Felipe Barraza, Diego Herrera, Andrea Garcés, Tomas Schwenke, Diego León Tapia, Jorge Cancino, Gloria Arriagada, Christina Haußner, Dominik Damm, Anette Rohrhofer, Bárbara Schmidt, Jutta Eichler, Rebecca Midgley, J. Wheeldon, Vincent Piguet, Priyanka Khopkar, Megha Rohamare, S. R. Kulkarni, Ana Godinho‐Santos, Allan J. Hance, João Gonçalves, Fabrizio Mammano, Romain Gasser, Meriem Hamoudi, Martina Pellicciotta, Zhicheng Zhou, Visdeloup Clara, Philippe Colin, Martine Braibant, Bernard Lagane, Matteo Negroni, Jula Wamara, Norbert Bannert, Thibault Mésplède, Nathan Osman, Kaitlin Anstett, Jiaming Calvin Liang, Hanh Thi Pham, Mark A. Wainberg, Wei Shao, Jigui Shan, Mary F Kearney, Xiaolin Wu, Frank Maldarelli, John W. Mellors, Brian T. Luke, John M. Coffin, Stephen Hughes, Thomas Fricke, Silvana Opp, Caitlin Shepard, D. A. Ivanov, José Carlos Valle-Casuso, Marine Kanja, Pierre Cappy, Daniela Lener, Ekaterina Knyazhanskaya, Andrey Anisenko, Timofei S. Zatsepin, Marina Gottikh, Alexander Komkov, Anastasia A. Minervina, G Nugmanov, В. Ю. Назаров, Konstantin Khodosevich, Ilgar Z. Mamedov, Yuri B Lebedev, Marta Colomer-Lluch, Ruth Serra-Moreno, Ambra Sarracino, Lavina Gharu, Alexander Pasternak, Alessandro Marcello, Ann Marie McCartin, Anurag Kulkarni, Valentin Le Douce, Virginie Gautier, Ann Baeyens, Evelien Naessens, Anouk Van Nuffel, Karin Weening, Anne Marie Reilly, Eva Claeys, Wim Trypsteen, Linos Vandekerckhove, Sven Eyckerman, Kris Gevaert, Bruno Verhasselt, Hoi Ping Mok, Nicholas Norton, Axel Fun, Jack Hirst, Mark R. Wills, Dalibor Miklík, Filip Šenigl, Jiřı́ Hejnar, Jun-ichi Sakuragi, Sayuri Sakuragi, Masaru Yokoyama, Tatsuo Shioda, Hironori Sato, Jochen Bodem, Rebecca Moschall, Sarah Denk, Steffen Erkelenz, Christian Schenk, Heiner Schaal, Norbert Donhauser, Ellen Socher, Millen Sebastian, Heinrich Sticht, Melanie Mann, Guochao Wei, Matthew J. Betts, Liu Yang, Timo Kehl, Robert B. Russell, Martin Löchelt, Oliver Hohn, Saeed Mostafa, Kirsten Hanke, Stephen Norley, Chia‐Yen Chen, Masashi Shingai, Pedro Borrego, Nuno Taveira, Klaus Strebel, Chris Hellmund, Melanie Friedrich, Friedrich L. Hahn, Christian Setz, Pia Rauch, Kirsten Fraedrich, Alina Matthaei, Petra Henklein, Maximilian Traxdorf, Torgils Fossen, Ulrich S. Schubert, Aya Khwaja, Meytal Galilee, Akram Alian, Birco Schwalbe, Heiko Hauser, Michael Schreiber, Mirte Scherpenisse, Young-Keol Cho, Jung-Eun Kim, Dong‐Hoon Jeong, Kateřina Trejbalová, Martina Benešová, Dana Kučerová, Zdeňka Vernerová, Rachel Amouroux, Petra Hájková, Daniel Elleder, Tomáš Hron, Helena Farkasova, Padhi Abinash, Jan Pačes, Henan Zhu, Robert J. Gifford, Pablo R. Murcia, Maria Luisa Carrozza, Anna-Maria Niewiadomska, Maurizio Mazzei, Mounir Abi-Said, Joseph Hughes, Stéphane Hué, Adetayo Emmanuel Obasa, G Jacobs, Susan Engelbrecht, Katharina Mack, Kathrin Starz, Matthias Geyer, Frédéric Bibollet-Ruche, Marie Leoz, Jean Christophe Plantier, Ayele Argaw-Denboba, Emanuela Balestrieri, Annalucia Serafino, Ilaria Bucci, Chiara Cipriani, Corrado Spadafora, Paolo Sinibaldi-Vallebona, Claudia Matteucci, Sreenivasan Jayashree, Ujjwal Neogi, Anil Kumar Chhangani, Shravan Sing Rathore, Bajrang R. J. Mathur, Adeyemi Abati, Busra Koc, Tuba Çiğdem Oğuzoğlu, Takatoshi Shimauchi, Stephan M. Caucheteux, Jocelyn Turpin, Katja Finsterbusch, Y. Tokura, Shanti Souriant, Balboa Luciana, Karine Pingris, Denise Kviatcowsky, Brigitte Raynaud-Messina, Céline Cougoule, Ingrid Mercier, Marcelo J. Kuroda, Pablo González-Montaner, Sandra Inwentarz, Eduardo José Moraña, Marı́a del Carmen Sasiain, Olivier Neyrolles, Maridonneau-Parini Isabelle, Lugo-Villarino Geanncarlo, Verollet Christel, Alexandra Herrmann, Dominique Thomas, Nerea Ferreirós Bouzas, Xavier Lahaye, Anvita Bhargava, Takeshi Satoh, Matteo Gentili, Silvia Cerboni, Aymeric Silvin, Cécile Conrad, Hakim Ahmed-Belkacem, Elisa C. Rodriguez, Jean-François Guichou, Nathalie Bosquet, Piel Matthieu, Roger Le Grand, Megan King, Jean–Michel Pawlotsky, Nicolas Manel, Henning Hofmann, Bénédicte Vanwalscappel, Nicolin Bloch, Nathaniel R. Landau, Stanislav Indik, Benedikt Hagen, José Carlos Valle-Casuso, Awatef Allouch, A Baltrus David, Françoise Barré‐Sinoussi, Monsef Benkirane, Gianfranco Pancino, Asier Sáez‐Cirión, Wing-Yiu Jason Lee, Richard P. Sloan, Bianca Schulte, Jonas Blomberg, Luana Vargiu, Patricia Rodriguez-Tomé, Enzo Tramontano, Göran Sperber, Namita Kumari, Tatiana Ammosova, Sharmeen Diaz, Patricia O'Neal, Sergeï Nekhai, Audrey Fahrny, Gustavo Gers-Huber, Annette Audigé, Anitha Jayaprakash, Ravi Sachidanandam, Matt Hernandez, Marsha Dillon-White, Emmanuel A. Maze, Claire Ham, Neil Almond, Greg J. Towers, Robert Belshaw, Patrícia de Sousa-Pereira, Joana Abrantes, Massimo Pizzato, Pedro J. Esteves, Tanja Kahle, Sven Schmitt, Laura Merkel, Nina Reuter, Thomas Stamminger, Ilaria Dalla Rosa, Kate N. Bishop, Antonella Spinazzola, Harriet C. T. Groom, Gabrielle Vièyres, Mathias Müsken, Thomas Zillinger, Veit Hornung, Winfried Barchet, Susanne Häußler, Thomas Pietschmann, Aneela Javed, Nicole Leuchte, Gabriela Salinas, Lennart Opitz, Sieghart Sopper, Christiane Mummert, Christian Hofmann, Angela Hückelhoven, Silke Bergmann, Sandra M. Müller-Schmucker, E. Harrer, Jan Dörrie, Niels Schaft, Thomas Harrer, Laure Cardinaux, M. L. Zahno, Hannelore Vogt, Reto Zanoni, Gregory Bertoni, Maximilian Muenchhoff, Philip Goulder, Oliver T. Keppler, Stephanie V Rebensburg, Markus Helfer, Yuwei Zhang, Huicheng Chen, Annie Bernier, Annie Gosselin, Jean Pierre Routy, Birgitta M. Wöhrl, Anna Schneider, Angela Corona, Imke Spöring, Mareike A Jordan, B. Buchholz, Elias Maccioni, Roberto Di Santo, Kristian Schweimer, Christian Scholz Scholz, Brian T. Weinert, Sebastian Wagner, Petra Beli, Yoichi Miyake, Jiazhuo Qi, Lars Jensen, Werner Streicher, Anna R. McCarthy, Nicholas J. Westwood, Sonia Laı́n, Jürgen Cox, Patrick Matthias, Matthias Mann, James E. Bradner, Chunaram Choudhary, Marcel Stern, Elena Valletta, Caterina Frezza, Francesca Marino‐Merlo, Sandro Grelli, Anna Lucia Serafino, Antonio Mastino, Beatrice Macchi, Meike Kaulfuß, Sonja Windmann, Wibke Bayer, Sello Given Mikasi, R. G. Hess, Michael Storcksdieck gen. Bonsmann, Carsten J. Kirschning, Lepenies Bernd, Anne Kolenbrander, Vladimir Temchura, Kenta Iijima, Junya Kobayashi, Yukihito Ishizaka
Software Mentions: 1
Published: about 10 years ago
10.1186/1743-422X-7-262
Genome-wide analysis of host-chromosome binding sites for Epstein-Barr Virus Nuclear Antigen 1 (EBNA1)Cited by: 74
Author(s): Fang Lü, Priyankara Wikramasinghe, Julie Norseen, Kevin Tsai, Pu Wang, Louise C. Showe, Ramana V. Davuluri, Paul M. Lieberman
Software Mentions: 1
Published: almost 16 years ago
10.1186/s13567-016-0363-8
Chicken interferome: avian interferon-stimulated genes identified by microarray and RNA-seq of primary chick embryo fibroblasts treated with a chicken type I interferon (IFN-α)Cited by: 38
Author(s): Efstathios S. Giotis, Rebecca Robey, Natalie G. Skinner, Christopher Tomlinson, Stephen Goodbourn, Michael A. Skinner
Software Mentions: 1
Published: about 10 years ago
10.1371/journal.pcbi.0030137
Evolutionary History of Mammalian Transposons Determined by Genome-Wide DefragmentationCited by: 109
Author(s): Joti Giordano, Yongchao Ge, Yevgeniy Gelfand, György Abrusán, Gary Benson, Peter E. Warburton
Software Mentions: 1
Published: about 19 years ago
10.1016/j.omto.2021.05.013
METTL3 increases cisplatin chemosensitivity of cervical cancer cells via downregulation of the activity of RAGECited by: 16
Author(s): Ruyi Li, Yizuo Song, Xin Chen, Maoping Chu, Zhi-wei Wang, Xueqiong Zhu
Software Mentions: 1
Published: about 5 years ago
10.1038/mtm.2014.55
Pigtailed macaques as a model to study long-term safety of lentivirus vector-mediated gene therapy for hemoglobinopathiesCited by: 11
Author(s): Hans–Peter Kiem, Paritha Arumugam, Christopher R. Burtner, Catherine Fox, Brian C. Beard, Phillip Dexheimer, Jennifer E. Adair, Punam Malik
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pcbi.1003075
Computational Assessment of the Cooperativity between RNA Binding Proteins and MicroRNAs in Transcript DecayCited by: 30
Author(s): Peng Jiang, Mona Singh, Hilary A. Coller
Software Mentions: 1
Published: over 13 years ago
10.1038/mp.2013.68
708 Common and 2010 rare DISC1 locus variants identified in 1542 subjects: analysis for association with psychiatric disorder and cognitive traitsCited by: 52
Author(s): Pippa A. Thomson, Jennifer Parla, Allan F. McRae, Melissa Kramer, Kamna Ramakrishnan, Jingjing Yao, Dinesh C. Soares, Shane McCarthy, Stewart W. Morris, Lorna Cardone, Stephen P. Cass, Elena Ghiban, William Hennah, Kathryn Evans, Daniella Rebolini, J. Kirsty Millar, Sarah E. Harris, John M. Starr, Donald J. MacIntyre, Andrew M. McIntosh, James D. Watson, Ian J. Deary, Peter M. Visscher, Douglas Blackwood, W. Richard McCombie, David J. Porteous
Software Mentions: 1
Published: over 13 years ago
10.1038/s41380-019-0440-2
Circadian glucocorticoid oscillations preserve a population of adult hippocampal neural stem cells in the aging brainCited by: 48
Author(s): Marijn Schouten, Pascal Bielefeld, Laura García-Corzo, Emma M.J. Passchier, Simona Gradari, Tassilo Jungenitz, Meritxell Pons-Espinal, Elias Gebara, Soraya Martín‐Suárez, Paul J. Lucassen, Helga E. de Vries, José Luís Trejo, Stephan W. Schwarzacher, Davide De Pietri Tonelli, Nicolas Toni, Helena Mira, Juan M. Encinas, Carlos P. Fitzsimons
Software Mentions: 1
Published: about 7 years ago
10.1038/s41380-019-0561-7
The Netrin-1/DCC guidance system: dopamine pathway maturation and psychiatric disorders emerging in adolescenceCited by: 53
Author(s): Daniel E. Vosberg, Marco Leyton, Cecilia Flores
Software Mentions: 1
Published: almost 7 years ago
10.1038/s41380-018-0210-6
Identification of ADHD risk genes in extended pedigrees by combining linkage analysis and whole-exome sequencingCited by: 15
Author(s): Jordi Corominas, Marieke Klein, Tetyana Zayats, Olga Rivero, Georg C. Ziegler, Marc Pauper, Kornelia Neveling, Geert Poelmans, Charline Jansch, Evgeniy Svirin, Julia Geißler, Heike Weber, Andreas Reif, Alejandro Arias Vásquez, Tessel E. Galesloot, Lambertus A. Kiemeney, Jan K. Buitelaar, Josep Antoni Ramos-Quiroga, Bru Cormand, Marta Ribasés, Kristian Hveem, Maiken Elvestad Gabrielsen, Per Hoffmann, Sven Cichon, Jan Haavik, Stefan Johansson, Christian Jacob, Marcel Romanos, Barbara Franke, Klaus‐Peter Lesch
Software Mentions: 1
Published: about 8 years ago
10.1371/journal.pcbi.0040038
Modeling an Evolutionary Conserved Circadian Cis-ElementCited by: 30
Author(s): Éric R. Paquet, Guillaume Rey, Félix Naef
Software Mentions: 1
Published: over 18 years ago
10.1007/s12035-018-1444-7
FOXG1 Regulates PRKAR2B Transcriptionally and Posttranscriptionally via miR200 in the Adult HippocampusCited by: 18
Author(s): Stefan Weise, G Arumugam, Alejandro Villarreal, Pavankumar Videm, Stefanie Heidrich, Nils Nebel, Verónica I. Dumit, Farahnaz Sananbenesi, Viktoria Reimann, Madeline Craske, Oliver Schilling, Wolfgang R. Hess, André Fischer, Rolf Backofen, Tanja Vogel
Software Mentions: 1
Published: over 7 years ago
10.1002/mgg3.61
<i><scp>CTSC</scp></i>and Papillon–Lefèvre syndrome: detection of recurrent mutations in<scp>H</scp>ungarian patients, a review of published variants and database updateCited by: 47
Author(s): Nikoletta Nagy, Péter Vályi, Zsanett Csoma, Adrienn Sulák, Kornélia Tripolszki, Katalin Farkas, Ekaterine Paschali, Ferenc Papp, László Tóth, Beáta Fábos, Lajos Kemény, Katalin Nagy, Márta Széll
Software Mentions: 1
Published: over 12 years ago
10.1186/1471-2164-10-46
A multiway analysis for identifying high integrity bovine BACsCited by: 2
Author(s): Abhirami Ratnakumar, Wesley C. Barris, Sean McWilliam, Rüdiger Bräuning, John C. McEwan, W. M. Snelling, Brian P. Dalrymple
Software Mentions: 1
Published: over 17 years ago
10.1371/journal.pgen.1008268
The Airn lncRNA does not require any DNA elements within its locus to silence distant imprinted genesCited by: 34
Author(s): Daniel Andergassen, Markus Muckenhuber, Philipp C. Bammer, Tomasz M. Kuliński, Hans-Christian Theussl, Takahiko Shimizu, Josef Penninger, Florian M. Pauler, Quanah J. Hudson
Software Mentions: 1
Published: about 7 years ago
10.1186/1471-2164-5-99
Arrays of ultraconserved non-coding regions span the loci of key developmental genes in vertebrate genomesCited by: 292
Author(s): Albin Sandelin, Peter J. Bailey, Sara Bruce, Pär G. Engström, Joanna M. Klos, Wyeth W. Wasserman, Johan Ericson, Boris Lenhard
Software Mentions: 1
Published: almost 22 years ago
10.1002/mgg3.295
Pitfalls in genetic testing: a case of a SNP in primer-annealing region leading to allele dropout in <i>BRCA1</i>Cited by: 10
Author(s): Felipe Cavalcanti Carneiro da Silva, Giovana Tardin Torrezan, Rafael Canfield Brianese, Raquel Stabellini
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pgen.1004343
Transcriptional Control of Steroid Biosynthesis Genes in the Drosophila Prothoracic Gland by Ventral Veins Lacking and KnirpsCited by: 45
Author(s): E. Thomas Danielsen, Morten E. Moeller, Elad Dorry, Tatsuya Komura-Kawa, Yoshinori Fujimoto, Jesper T. Troelsen, Rachel Herder, Michael B. O’Connor, Ryusuke Niwa, Kim Rewitz
Software Mentions: 1
Published: about 12 years ago
10.1002/mgg3.1300
Reclassification of genetic variants in children with long QT syndromeCited by: 13
Author(s): Dominik S. Westphal, Tobias Burkard, Alexander Moscu‐Gregor, Roman Gebauer, Gabriele Hessling, Cordula M. Wolf
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pgen.1000867
Association of the OCA2 Polymorphism His615Arg with Melanin Content in East Asian Populations: Further Evidence of Convergent Evolution of Skin PigmentationCited by: 110
Author(s): Melissa Edwards, Abigail W. Bigham, Jinze Tan, Shilin Li, Agnes Gozdzik, Kelley Ross, Jin Li, Esteban J. Parra
Software Mentions: 1
Published: over 16 years ago
10.1371/journal.pgen.1002388
Identification of a Genomic Reservoir for New TRIM Genes in Primate GenomesCited by: 98
Author(s): Kyudong Han, Dianne I. Lou, Sara L. Sawyer
Software Mentions: 1
Published: almost 15 years ago
10.1371/journal.pgen.1006380
Coordinately Co-opted Multiple Transposable Elements Constitute an Enhancer for wnt5a Expression in the Mammalian Secondary PalateCited by: 45
Author(s): Hidenori Nishihara, Naoki Kobayashi, Chiharu Kimura-Yoshida, Kuo Yan, Olga Bormuth, Qiong Ding, Akiko Nakanishi, Takeshi Sasaki, Mika Hirakawa, Kenta Sumiyama, Yasuhide Furuta, Victor Tarabykin, Isao Matsuo, Norihiro Okada
Software Mentions: 1
Published: almost 10 years ago
10.1002/mgg3.107
Diagnosis of an imprinted‐gene syndrome by a novel bioinformatics analysis of whole‐genome sequences from a family trioCited by: 13
Author(s): Dale L. Bodian, Benjamin D. Solomon, Alina Khromykh, Dzung C. Thach, Ramaswamy K. Iyer, Kathleen Link, Robin Baker, Rajiv Baveja, Joseph G. Vockley, John E. Niederhuber
Software Mentions: 1
Published: about 12 years ago
10.1016/j.schres.2016.11.034
Novel brain expressed RNA identified at the MIR137 schizophrenia-associated locusCited by: 12
Author(s): Olympia Gianfrancesco, Alix Warburton, David A. Collier, Vivien J. Bubb, John P. Quinn
Software Mentions: 1
Published: over 9 years ago
10.1002/mgg3.1086
Haploinsufficiency of the <i>FOXA2</i> associated with a complex clinical phenotypeCited by: 5
Author(s): Idris Mohammed, Sara Al‐Khawaga, David Bohanna, Abdusamea Shabani, Faiyaz Ahmad Khan, Donald R. Love, Zafar Nawaz, Khalid Hussain
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pgen.1000193
Novel Mutations in TARDBP (TDP-43) in Patients with Familial Amyotrophic Lateral SclerosisCited by: 405
Author(s): Nicola J. Rutherford, Yongjie Zhang, Matt Baker, Jennifer Gass, NiCole A. Finch, Yafei Xu, Heather Stewart, Brendan J. Kelley, Karen M. Kuntz, Richard Crook, Jemeen Sreedharan, Caroline Vance, Eric J. Sorenson, Carol F. Lippa, Eileen H. Bigio, Daniel H. Geschwind, David S. Knopman, Hiroshi Mitsumoto, Ronald C. Petersen, Neil R. Cashman, Mike Hutton, Christopher E. Shaw, Kevin B. Boylan, Bradley F. Boeve, Neill R. Graff‐Radford, Zbigniew K. Wszołek, Richard J. Caselli, Dennis W. Dickson, Ian R. Mackenzie, Leonard Petrucelli, Rosa Rademakers
Software Mentions: 1
Published: almost 18 years ago
10.1371/journal.pgen.0030020
A Screen for Retrotransposed Imprinted Genes Reveals an Association between X Chromosome Homology and Maternal Germ-Line MethylationCited by: 108
Author(s): Andrew J. Wood, Roland G. Roberts, David Gabriel Monk, Gudrun E. Moore, Reiner Schulz, Rebecca J. Oakey
Software Mentions: 1
Published: over 19 years ago
10.1371/journal.pgen.0030090
Localizing Recent Adaptive Evolution in the Human GenomeCited by: 456
Author(s): Scott Williamson, Melissa J. Hubisz, Andrew G. Clark, Bret A. Payseur, Carlos D. Bustamante, Rasmus Nielsen
Software Mentions: 1
Published: over 19 years ago
10.1371/journal.pgen.1002882
Genetics and Regulatory Impact of Alternative Polyadenylation in Human B-Lymphoblastoid CellsCited by: 48
Author(s): Oh Kyu Yoon, Tiffany Y. Hsu, Joo Hyun Im, Rachel B. Brem
Software Mentions: 1
Published: about 14 years ago
10.3390/molecules191118721
Methanolic Extracts of Solieria robusta Inhibits Proliferation of Oral Cancer Ca9-22 Cells via Apoptosis and Oxidative StressCited by: 36
Author(s): Y. Albert Yen, Ammad Ahmad Farooqı, Kun-Tzu Li, Ghazala Butt, Jen‐Yang Tang, Chang‐Yi Wu, Yuan-Bin Cheng, Ming‐Feng Hou, Hsueh‐Wei Chang
Software Mentions: 1
Published: almost 12 years ago
10.1371/journal.pgen.1002396
Targeted Proteolysis of Plectin Isoform 1a Accounts for Hemidesmosome Dysfunction in Mice Mimicking the Dominant Skin Blistering Disease EBS-OgnaCited by: 56
Author(s): Gernot Walko, Nevena Vukasinovic, Karin Groß, Ilse Fischer, Sabrina Sibitz, Peter Fuchs, Siegfried Reipert, Ute Jungwirth, Walter Berger, Ulrich Salzer, Oliviero Carugo, Maria J. Castañón, Gerhard Wiche
Software Mentions: 1
Published: almost 15 years ago
10.1371/journal.pgen.1003504
The Majority of Primate-Specific Regulatory Sequences Are Derived from Transposable ElementsCited by: 290
Author(s): Pierre-Étienne Jacques, Justin Jeyakani, Guillaume Bourque
Software Mentions: 1
Published: over 13 years ago
10.1016/j.schres.2018.02.036
Regulatory characterisation of the schizophrenia-associated CACNA1C proximal promoter and the potential role for the transcription factor EZH2 in schizophrenia aetiologyCited by: 21
Author(s): Kimberley Billingsley, Maurizio Manca, Olympia Gianfrancesco, David A. Collier, Helen Sharp, Vivien J. Bubb, John P. Quinn
Software Mentions: 1
Published: about 8 years ago
10.1186/1471-2164-13-688
CBS: an open platform that integrates predictive methods and epigenetics information to characterize conserved regulatory features in multiple Drosophila genomesCited by: 1
Author(s): Enrique Blanco, Montserrat Corominas
Software Mentions: 1
Published: over 14 years ago
10.1371/journal.pgen.1000195
Missense Mutation in Exon 2 of SLC36A1 Responsible for Champagne Dilution in HorsesCited by: 53
Author(s): Deborah Cook, Samantha A. Brooks, Rebecca R. Bellone, Ernest Bailey
Software Mentions: 1
Published: almost 18 years ago
10.3390/molecules23092191
ELF3, ELF5, EHF and SPDEF Transcription Factors in Tissue Homeostasis and CancerCited by: 68
Author(s): Ian Y. Luk, Camilla M. Reehorst, John M. Mariadason
Software Mentions: 1
Published: about 8 years ago
10.1371/journal.pgen.0030086
Arabidopsis TFL2/LHP1 Specifically Associates with Genes Marked by Trimethylation of Histone H3 Lysine 27Cited by: 538
Author(s): Franziska Turck, François Roudier, Sara Farrona, Marie‐Laure Martin‐Magniette, Elodie Guillaume, Nicolas Buisine, Séverine Gagnot, Robert A. Martienssen, George Coupland, Vincent Colot
Software Mentions: 1
Published: over 19 years ago
10.1371/journal.pgen.1005451
Strong Selective Sweeps on the X Chromosome in the Human-Chimpanzee Ancestor Explain Its Low DivergenceCited by: 55
Author(s): Julien Y. Dutheil, Kasper Munch, Kiwoong Nam, Thomas Mailund, Mikkel H. Schierup
Software Mentions: 1
Published: about 11 years ago
10.1371/journal.pgen.1006751
Semaphorin-1a prevents Drosophila olfactory projection neuron dendrites from mis-targeting into select antennal lobe regionsCited by: 8
Author(s): Hung‐Chang Shen, Sao-Yu Chu, Tsai-Chi Hsu, Chun-Han Wang, I-Ya Lin, Hung–Hsiang Yu
Software Mentions: 1
Published: over 9 years ago
10.1186/1755-8166-4-3
Evidence-based genomic diagnosis characterized chromosomal and cryptic imbalances in 30 elderly patients with myelodysplastic syndrome and acute myeloid leukemiaCited by: 35
Author(s): Renu Bajaj, Feifei Xu, Bixia Xiang, Katherine Wilcox, Autumn DiAdamo, Rachana A. Kumar, Alexandra Pietraszkiewicz, Stephanie Halene, Peining Li
Software Mentions: 1
Published: over 15 years ago
10.1186/s12863-019-0749-5
In silico genome-wide miRNA-QTL-SNPs analyses identify a functional SNP associated with mastitis in HolsteinsCited by: 12
Author(s): Qiang Jiang, Han Zhao, Rongling Li, Yaran Zhang, Yong Liu, Jinpeng Wang, Xiuge Wang, Zhihua Ju, Wenhao Liu, Minghai Hou, Jinming Huang
Software Mentions: 1
Published: over 7 years ago
10.1007/s11434-015-0905-x
Transposable elements at the center of the crossroads between embryogenesis, embryonic stem cells, reprogramming, and long non-coding RNAsCited by: 48
Author(s): Andrew P. Hutchins, Duanqing Pei
Software Mentions: 1
Published: almost 11 years ago
10.1371/journal.pgen.1004933
hnRNP K Coordinates Transcriptional Silencing by SETDB1 in Embryonic Stem CellsCited by: 61
Author(s): Peter J. Thompson, Vered Dulberg, Kyung Mee Moon, Leonard J. Foster, Carol Chen, Mehdi Karimi, Matthew C. Lorincz
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pgen.1004958
Tissue-Specific Effects of Genetic and Epigenetic Variation on Gene Regulation and SplicingCited by: 180
Author(s): María Gutiérrez‐Arcelus, Halit Ongen, Tuuli Lappalainen, Stephen B. Montgomery, Alfonso Buil, Alisa Yurovsky, Julien Bryois, Ismaël Padioleau, Luciana Romano, Alexandra Planchon, Emilie Falconnet, Deborah Bielser, Maryline Gagnebin, Thomas Giger, Christelle Borel, Audrey Letourneau, Periklis Makrythanasis, Michel Guipponi, Corinne Gehrig, Stylianos E. Antonarakis, Emmanouil T. Dermitzakis
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pgen.1003895
ALS-Associated FUS Mutations Result in Compromised FUS Alternative Splicing and AutoregulationCited by: 160
Author(s): Yueqin Zhou, Songyan Liu, Guodong Liu, Arzu Öztürk, Geoffrey Hicks
Software Mentions: 1
Published: almost 13 years ago
10.1186/s12863-016-0404-3
Multiple regulatory variants located in cell type-specific enhancers within the PKP2 locus form major risk and protective haplotypes for canine atopic dermatitis in German shepherd dogsCited by: 7
Author(s): Katarina Tengvall, Sergey V. Kozyrev, Marcin Kierczak, Kerstin Bergvall, Fabiana H.G. Farias, Brita Ardesjö-Lundgren, Mia Olsson, Eva Murén, Ragnvi Hagman, Tosso Leeb, Gerli Pielberg, Åke Hedhammar, Gerhard Andersson, Kerstin Lindblad‐Toh
Software Mentions: 1
Published: about 10 years ago
10.1371/journal.pgen.0030127
Divergent Evolution of Human p53 Binding Sites: Cell Cycle Versus ApoptosisCited by: 93
Author(s): Monica M. Horvath, Xuting Wang, Michael A. Resnick, Douglas A. Bell
Software Mentions: 1
Published: about 19 years ago
10.1186/s13039-014-0075-6
Investigation of selected genomic deletions and duplications in a cohort of 338 patients presenting with syndromic obesity by multiplex ligation-dependent probe amplification using synthetic probesCited by: 10
Author(s): Carla Sustek D’Angelo, Monica Castro Varela, Cláudia Irene Emílio de Castro, Chong Kim, Débora Romeo Bertola, Charles Marques Lourenço, Ana Beatriz Alvarez Perez, Célia Priszkulnik Koiffmann
Software Mentions: 1
Published: almost 12 years ago
10.18632/oncotarget.11324
The cytokine-cosmc signaling axis upregulates the tumor-associated carbohydrate antigen TnCited by: 4
Author(s): Chia Wen Ho, Chia‐Hua Lin, Yi Wei Liaw, Hsiao Ling Chiang, Yu Tang Chin, Rui Huang, Hung Cheng Lai, Yaw Wen Hsu, Po Jan Kuo, Chiao-En Chen, Hung Yun Lin, Jacqueline Whang‐Peng, Shin Nieh, Earl Fu, Leroy F. Liu, Jaulang Hwang
Software Mentions: 1
Published: about 10 years ago
10.1371/journal.pgen.1000522
Disease-Causing 7.4 kb Cis-Regulatory Deletion Disrupting Conserved Non-Coding Sequences and Their Interaction with the FOXL2 Promotor: Implications for Mutation ScreeningCited by: 83
Author(s): Barbara D′haene, Catia Attanasio, Diane Beysen, Josée Dostie, Edmond G. Lemire, Philippe Bouchard, Michael Field, K. Jones, Birgit Lorenz, Björn Menten, Karen Buysse, Filip Pattyn, Marc Friedli, Catherine Ucla, Colette Rossier, Carine Wyss, Frank Speleman, Anne De Paepe, Job Dekker, Stylianos E. Antonarakis, Elfride De Baere
Software Mentions: 1
Published: about 17 years ago
10.1371/journal.pgen.1003489
Female Bias in Rhox6 and 9 Regulation by the Histone Demethylase KDM6ACited by: 40
Author(s): Joel B. Berletch, Xinxian Deng, Di Kim Nguyen, Christine M. Distèche
Software Mentions: 1
Published: over 13 years ago
10.1186/1755-8166-1-11
Chromosomal assignment of canine THADA gene to CFA 10q25Cited by: 3
Author(s): Jan T. Soller, Claudia Beuing, Hugo Murua Escobar, Susanne Winkler, Nicola Reimann-Berg, Norbert Drieschner, G. Dolf, C. Schelling, Ingo Nolte, Jörn Bullerdiek
Software Mentions: 1
Published: over 18 years ago
10.1371/journal.pgen.1004257
A LINE-1 Insertion in DLX6 Is Responsible for Cleft Palate and Mandibular Abnormalities in a Canine Model of Pierre Robin SequenceCited by: 49
Author(s): Zena Wolf, Elizabeth J. Leslie, Boaz Arzi, Kartika Jayashankar, Nili Karmi, Zhong‐Lin Jia, Douglas J. Rowland, Amy Young, Noa Safra, Sliskovic Saundra, Jeffrey C. Murray, Claire M. Wade, Danika L. Bannasch
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pgen.1004498
Microsatellite Interruptions Stabilize Primate Genomes and Exist as Population-Specific Single Nucleotide Polymorphisms within Individual Human GenomesCited by: 26
Author(s): Guruprasad Ananda, Suzanne E. Hile, Amanda Breski, Yanli Wang, Yogeshwar D. Kelkar, Kateryna D. Makova, Kristin A. Eckert
Software Mentions: 1
Published: about 12 years ago
10.1155/2014/259382
Structural Differences Observed in Arboviruses of the Alphavirus and Flavivirus GeneraCited by: 18
Author(s): Raquel Hernandez, Dennis T. Brown, Angel Paredes
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pgen.1003285
Drosophila Yemanuclein and HIRA Cooperate for De Novo Assembly of H3.3-Containing Nucleosomes in the Male PronucleusCited by: 49
Author(s): Guillermo A. Orsi, Ahmed Algazeery, Régis E. Meyer, Michèle Capri, Laure Sapey-Triomphe, Béatrice Horard, Henri Gruffat, Pierre Couble, Ounissa Aı̈t-Ahmed, Benjamin Loppin
Software Mentions: 1
Published: over 13 years ago
10.1186/s12863-020-00868-w
Identification and genetic analysis of qCL1.2, a novel allele of the “green revolution” gene SD1 from wild rice (Oryza rufipogon) that enhances plant heightCited by: 14
Author(s): Lizhen Zhang, Jingfen Huang, Yanyan Wang, Rui Xu, Ziyi Yang, Zhigang Zhao, Shijia Liu, Yunlu Tian, Xiaoming Zheng, Fĕi Li, Junrui Wang, Yue Song, Jiaqi Li, Yongxia Cui, Lifang Zhang, Yunlian Cheng, Jinhao Lan, Weihua Qiao, Qing Yang
Software Mentions: 1
Published: about 6 years ago
10.1186/s13039-017-0308-6
Incidence of the 22q11.2 deletion in a large cohort of miscarriage samplesCited by: 25
Author(s): Melissa Maisenbacher, Katrina Merrion, B. Pettersen, Michael Young, Kiyoung Paik, Sushma Iyengar, Stephanie Kareht, Styrmir Sigurjonsson, Zachary Demko, Kimberly Martin
Software Mentions: 1
Published: over 9 years ago
10.1038/s41598-017-10339-5
The PDK1 Inhibitor Dichloroacetate Controls Cholesterol Homeostasis Through the ERK5/MEF2 PathwayCited by: 23
Author(s): Asaad Khan, Nerea Allende-Vega, Delphine Gitenay, Sabine Gerbal‐Chaloin, Claire Gondeau, Dang Nghiem Vo, Sana Belkahla, Stefania Orecchioni, Giovanna Talarico, Francesco Bertolini, Milica Božić, José M. Valdivielso, Fabienne Bejjani, Isabelle Jariel, Isabel C. López-Mejía, Lluís Fajas, Charles-Henri Lecellier, Javier Hernandez, Martine Daujat, Martín Villalba
Software Mentions: 1
Published: almost 9 years ago
10.1371/journal.pgen.1002582
Antagonistic Regulation of Apoptosis and Differentiation by the Cut Transcription Factor Represents a Tumor-Suppressing Mechanism in DrosophilaCited by: 41
Author(s): Zongzhao Zhai, Nati Ha, Fani Papagiannouli, Anne Hamacher-Brady, Nathan R. Brady, Sebastian Sorge, Daniela Bezdan, Ingrid Lohmann
Software Mentions: 1
Published: over 14 years ago
10.1371/journal.pgen.1000506
Genome-Wide uH2A Localization Analysis Highlights Bmi1-Dependent Deposition of the Mark at Repressed GenesCited by: 60
Author(s): Eric M. Kallin, Ran Cao, Raja Jothi, Kai Xia, Kairong Cui, Keji Zhao, Yi Zhang
Software Mentions: 1
Published: about 17 years ago
10.1371/journal.pgen.1000072
A Genome-Wide Association Study Identifies Protein Quantitative Trait Loci (pQTLs)Cited by: 404
Author(s): David Melzer, John Perry, Dena G. Hernandez, Annamaria Corsi, Kara Stevens, Ian Rafferty, Fulvio Lauretani, Anna Murray, J. Raphael Gibbs, Giuseppe Paolisso, Sajjad Rafiq, Javier Simón‐Sánchez, Hana Lango, Sonja W. Scholz, Michael N. Weedon, Sampath Arepalli, Neil Rice, Nicole Washecka, Alison Hurst, Angela Britton, William Henley, Joyce van de Leemput, Rongling Li, Anne B. Newman, Greg Tranah, Tamara B. Harris, Vijay Panicker, Colin Dayan, Amanda J. Bennett, Mark I. McCarthy, Aimo Ruokonen, Marjo‐Riitta Järvelin, Jack M. Guralnik, Stefania Bandinelli, Timothy M. Frayling, Andrew B. Singleton, Luigi Ferrucci
Software Mentions: 1
Published: over 18 years ago
10.1186/s13039-015-0153-4
High rates of submicroscopic aberrations in karyotypically normal acute lymphoblastic leukemiaCited by: 16
Author(s): Moneeb A.K. Othman, Joana B. Melo, Isabel M. Carreira, Martina Rinčić, Anita Glaser, Beata Grygalewicz, Bernd Gruhn, Kathleen Wilhelm, Katharina Rittscher, Britta Meyer, Maria Luíza Macedo Silva, Terezinha de Jesus Marques Salles, Thomas Liehr
Software Mentions: 1
Published: about 11 years ago
10.1186/s13039-020-00510-5
Non-classical 1p36 deletion in a patient with Duane retraction syndrome: case report and literature reviewCited by: 2
Author(s): Emiy Yokoyama, Camilo E. Villarroel, Sinhué Diaz, Victoria del Castillo, Patricia Pérez-Vera, Consuelo Salas-Labadía, S Gómez, Reneé Barreda, Bertha Molina, Sara Frías
Software Mentions: 1
Published: almost 6 years ago
10.1186/s13039-021-00554-1
Terminal 10q26.12 deletion is associated with neonatal asymmetric crying facies syndrome: a case report and literature reviewCited by: 0
Author(s): Qinghong Li, Chunmei Sun, Jinzhen Guo, Zhang Wen, Liping Zhang
Software Mentions: 1
Published: about 5 years ago
10.1186/s13039-017-0311-y
Molecular cytogenetic characterisation of a novel de novo ring chromosome 6 involving a terminal 6p deletion and terminal 6q duplication in the different arms of the same chromosomeCited by: 10
Author(s): Nikolai Paul Pace, Frideriki Maggouta, Melissa Twigden, Isabella Borg
Software Mentions: 1
Published: over 9 years ago
10.1186/s12863-020-00913-8
Molecular basis of a new ovine model for human 3M syndrome-2Cited by: 3
Author(s): Shernae A. Woolley, Steven Hayes, M. R. Shariflou, F. W. Nicholas, Cali E. Willet, Brendon A. O’Rourke, Imke Tammen
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.pgen.1003065
Recurrent Targeted Genes of Hepatitis B Virus in the Liver Cancer Genomes Identified by a Next-Generation Sequencing–Based ApproachCited by: 167
Author(s): Dong Ding, Xiaoyan Lou, Dasong Hua, Wei Yu, Lisha Li, Jun Wang, Feng Gao, Na Zhao, Guoping Ren, Lanjuan Li, Biaoyang Lin
Software Mentions: 1
Published: over 13 years ago
10.1371/journal.pgen.1000125
A Candidate Gene Approach Identifies the CHRNA5-A3-B4 Region as a Risk Factor for Age-Dependent Nicotine AddictionCited by: 245
Author(s): Robert B. Weiss, Timothy B. Baker, Dale S. Cannon, Andrew von Niederhausern, Diane M. Dunn, Nori Matsunami, Nanda Singh, Lisa Baird, Hilary Coon, William M. McMahon, Megan E. Piper, Michael C. Fiore, Mary Beth Scholand, John E. Connett, Richard E. Kanner, Lorise C. Gahring, Scott W. Rogers, John R. Hoidal, M. Leppert
Software Mentions: 1
Published: about 18 years ago
10.1186/s13039-016-0266-4
Genome wide array-CGH and qPCR analysis for the identification of genome defects in Williams’ syndrome patients in Saudi ArabiaCited by: 5
Author(s): Ibtessam R Hussein, Afaf Magbooli, Etimad Huwait, Adeel G. Chaudhary, Rima S Bader, Mamdooh Gari, Fai T. Ashgan, Maha Mohsin Al-Quaiti, Adel M. Abuzenadah, Mohammed Al‐Qahtani
Software Mentions: 1
Published: about 10 years ago
10.1038/s41597-021-00878-y
AI-assisted tracking of worldwide non-pharmaceutical interventions for COVID-19Cited by: 25
Author(s): Parthasarathy Suryanarayanan, Ching-Huei Tsou, Ananya Poddar, Diwakar Mahajan, Bharath Dandala, Piyush Madan, Anshul Agrawal, Charles Wachira, Osebe Mogaka Samuel, Osnat Bar-Shira, Clifton Kipchirchir, Sharon Okwako, William Ogallo, Fred Otieno, Timothy Nyota, Fiona Matu, Vesna Barros, Daniel Shats, Oren Kagan, Sekou L. Remy, Oliver Bent, Pooja Guhan, Shilpa Mahatma, Aisha Walcott-Bryant, Divya Pathak, Michal Rosen-Zvi
Software Mentions: 1
Published: over 5 years ago
10.1074/mcp.RA117.000155
Detection of Proteome Diversity Resulted from Alternative Splicing is Limited by Trypsin Cleavage SpecificityCited by: 68
Author(s): Xiaojing Wang, Simona G. Codreanu, Bo Wen, Kai Li, Matthew Chambers, D.C. Liebler, Bing Zhang
Software Mentions: 1
Published: over 8 years ago
10.1186/1471-2156-9-6
A hierarchical and modular approach to the discovery of robust associations in genome-wide association studies from pooled DNA samplesCited by: 24
Author(s): Paola Sebastiani, Zhenming Zhao, María M. Abad‐Grau, Alberto Riva, Stephen W. Hartley, Amanda Sedgewick, Alessandro Doria, Monty Montano, Efthymia Melista, Dellara F. Terry, Thomas T. Perls, Martin H. Steinberg, Clinton T. Baldwin
Software Mentions: 1
Published: over 18 years ago
10.1186/s40348-020-00102-8
Nup133 and ERα mediate the differential effects of hyperoxia-induced damage in male and female OPCsCited by: 7
Author(s): Donna Elizabeth Sunny, Elke Hammer, Sebastian Strempel, Christy Joseph, Himanshu Manchanda, Till Ittermann, Stephanie Hübner, Frank Ulrich Weiß, Uwe Völker, Matthias Heckmann
Software Mentions: 1
Published: about 6 years ago
10.1186/1471-2156-8-78
SERpredict: Detection of tissue- or tumor-specific isoforms generated through exonization of transposable elementsCited by: 34
Author(s): Britta Mersch, Noa Sela, Gil Ast, Sándor Suhai, Agnes Hotz‐Wagenblatt
Software Mentions: 1
Published: almost 19 years ago
10.1038/srep10247
Evaluating information content of SNPs for sample-tagging in re-sequencing projectsCited by: 20
Author(s): Hao Hu, Xiang Liu, Wenfei Jin, Hans‐Hilger Ropers, Thomas F. Wienker
Software Mentions: 1
Published: over 11 years ago
10.1007/s11010-021-04103-7
Evidence of synergism among three genetic variants in a patient with LMNA-related lipodystrophy and amyotrophic lateral sclerosis leading to a remarkable nuclear phenotypeCited by: 3
Author(s): Kathryn Volkening, Sali M.K. Farhan, Jennifer L. Kao, Cheryl Leystra-Lantz, Lee Cyn Ang, Adam D. McIntyre, Jian Wang, Robert A. Hegele, Michael J. Strong
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pgen.1005730
Brachyury, Foxa2 and the cis-Regulatory Origins of the NotochordCited by: 30
Author(s): Diana S. José-Edwards, Izumi Oda-Ishii, Jamie E. Kugler, Yale J. Passamaneck, Lavanya Katikala, Yutaka Nibu, Anna Di Gregorio
Software Mentions: 1
Published: over 10 years ago
10.1016/j.molcel.2015.01.011
BRCA1 Recruitment to Transcriptional Pause Sites Is Required for R-Loop-Driven DNA Damage RepairCited by: 342
Author(s): Elodie Hatchi, Konstantina Skourti-Stathaki, Steffen Ventz, Luca Pinello, Angela Yen, Kinga Kamieniarz-Gdula, Stoil D. Dimitrov, Shailja Pathania, Kristine McKinney, Matthew L. Eaton, M Kellis, Sarah J. Hill, Giovanni Parmigiani, Nick J. Proudfoot, David M. Livingston
Software Mentions: 1
Published: over 11 years ago
10.1186/1476-4598-13-120
A novel approach to identify driver genes involved in androgen-independent prostate cancerCited by: 44
Author(s): Ellyn N. Schinke, Victor M. Bii, Arun Kumar Nalla, Dustin T. Rae, Laura Tedrick, Gary G. Meadows, Grant D. Trobridge
Software Mentions: 1
Published: over 12 years ago
10.1038/srep09930
miR-148a is Associated with Obesity and Modulates Adipocyte Differentiation of Mesenchymal Stem Cells through Wnt SignalingCited by: 134
Author(s): Chunmei Shi, Min Zhang, Meiling Tong, Lei Yang, Lei Pang, Ling Chen, Gao Xu, Xia Chi, Hong Qin, Yuhui Ni, Chenbo Ji, Xirong Guo
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pgen.1006997
A high resolution atlas of gene expression in the domestic sheep (Ovis aries)Cited by: 117
Author(s): Emily L. Clark, Stephen J. Bush, Mary E. B. McCulloch, Iseabail L. Farquhar, Rachel Young, Lucas Lefèvre, Clare Pridans, Hiu‐Gwen Tsang, Chunlei Wu, Cyrus Afrasiabi, Michael Watson, Bruce Whitelaw, Thomas Charles Augustus Freeman, Kim M. Summers, Alan Archibald, David Hume
Software Mentions: 1
Published: almost 9 years ago
10.1371/journal.pgen.1002540
A Downstream CpG Island Controls Transcript Initiation and Elongation and the Methylation State of the Imprinted Airn Macro ncRNA PromoterCited by: 17
Author(s): Martha V. Koerner, Florian M. Pauler, Quanah J. Hudson, Federica Santoro, Anna Sawicka, Philipp M. Guenzl, Stefan H. Stricker, Yvonne M. Schichl, Paulina A. Latos, Ruth M. Klement, Katarzyna E. Warczok, Jacek Wojciechowski, Christian Seiser, Róbert Královics, Denise P. Barlow
Software Mentions: 1
Published: over 14 years ago
10.1186/s12943-020-01277-4
The PVT1 lncRNA is a novel epigenetic enhancer of MYC, and a promising risk-stratification biomarker in colorectal cancerCited by: 51
Author(s): Kunitoshi Shigeyasu, Shusuke Toden, Tomohiro Ozawa, Takatoshi Matsuyama, Takeshi Nagasaka, Toshiaki Ishikawa, Debashis Sahoo, Pradipta Ghosh, Hiroyuki Uetake, Toshiyoshi Fujiwara, Ajay Goel
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.pgen.1000508
Genome-Wide Association Scan Meta-Analysis Identifies Three Loci Influencing Adiposity and Fat DistributionCited by: 457
Author(s): Cecilia M. Lindgren, Iris M. Heid, Joshua C. Randall, Claudia Lamina, Valgerður Steinthórsdóttir, Lu Qi, Elizabeth K. Speliotes, Guðmar Þorleifsson, Cristen J. Willer, Blanca Herrera, Anne Jackson, Noha Lim, Paul Scheet, Nicole Soranzo, Najaf Amin, Yurii S. Aulchenko, John C. Chambers, Alexander W. Drong, Jia Luan, Helen N. Lyon, Fernando Rivadeneira, Serena Sanna, Nicholas J. Timpson, M. Carola Zillikens, Hua Zhao Jing, Peter Almgren, Stefania Bandinelli, Amanda J. Bennett, Richard N. Bergman, Lori L. Bonnycastle, Suzannah Bumpstead, Stephen J. Chanock, Lynn Cherkas, Peter S. Chines, Lachlan Coin, Cyrus Cooper, Gabriel Crawford, Angela Doering, Anna F. Dominiczak, Alex S.F. Doney, Shah Ebrahim, Paul Elliott, Michael R. Erdos, Karol Estrada, Luigi Ferrucci, Guido Fischer, Nita G. Forouhi, Christian Gieger, Harald Grallert, Christopher J. Groves, Scott M. Grundy, Candace Guiducci, David Hadley, Anders Hamsten, Aki S. Havulinna, Albert Hofman, Rolf Holle, John W. Holloway, Thomas Illig, Bo Isomaa, Leonie C. Jacobs, Karen Jameson, Pekka Jousilahti, Fredrik Karpe, Johanna Kuusisto, Jaana Laitinen, G.M. Lathrop, Debbie A. Lawlor, Massimo Mangino, Wendy L. McArdle, Thomas Meitinger, Mario A. Morken, Andrew P. Morris, Patricia B. Munroe, Narisu Narisu, Anna Nordström, Peter Nordström, Ben A. Oostra, Colin N.A. Palmer, Felicity Payne, John F. Peden, Inga Prokopenko, Frida Renström, Aimo Ruokonen, Veikko Salomaa, Manjinder S. Sandhu, Laura J. Scott, Angelo Scuteri, Kaisa Silander, Kijoung Song, Xin Yuan, Heather M. Stringham, Amy J. Swift, Tiinamaija Tuomi, Manuela Uda, Péter Vollenweider, Gérard Waeber, Chris Wallace, G. Bragi Walters, Michael N. Weedon, Jacqueline C. M. Witteman, Cuilin Zhang, Weihua Zhang, Mark Caulfield, Francis S. Collins, George Davey Smith, Ian N.M. Day, Paul W. Franks, Andrew T. Hattersley, Frank B. Hu, Marjo‐Riitta Järvelin, Augustine Kong, Jaspal S. Kooner, Markku Laakso, Edward G. Lakatta, Vincent Mooser, Andrew D. Morris, Leena Peltonen, Nilesh J. Samani, Timothy D. Spector, David P. Strachan, Toshiko Tanaka, Jaakko Tuomilehto, André G. Uitterlinden, Cornelia M. van Duijn, Nicholas J. Wareham, Hugh Watkins, Dawn Waterworth, Michael Boehnke, Panos Deloukas, Leif Groop, David J. Hunter, Unnur Þorsteinsdóttir, David Schlessinger, H‐Erich Wichmann, Timothy M. Frayling, Gonçalo R. Abecasis, Joel N. Hirschhorn, Ruth J.F. Loos, Kāri Stefánsson, Karen L. Mohlke, Inês Barroso, Mark I. McCarthy
Software Mentions: 1
Published: about 17 years ago
10.1038/srep10423
Unique somatic and malignant expression patterns implicate PIWI-interacting RNAs in cancer-type specific biologyCited by: 137
Author(s): Victor D. Martínez, Emily A. Vucic, Kelsie L. Thu, Roland Hubaux, Katey S.S. Enfield, Larissa A. Pikor, Daiana D. Becker‐Santos, Carolyn J. Brown, Stephen Lam, Wan L. Lam
Software Mentions: 1
Published: over 11 years ago
10.1186/1756-6606-4-14
Identification of a novel intronic enhancer responsible for the transcriptional regulation of musashi1 in neural stem/progenitor cellsCited by: 23
Author(s): S. Kawase, Toshio Imai, Chikako Miyauchi-Hara, Kunio Yaguchi, Yoshinori Nishimoto, Shin Ichi Fukami, Yuji Matsuzaki, Atsushi Miyawaki, Shigeyoshi Itohara, Hideyuki Okano
Software Mentions: 1
Published: over 15 years ago
10.1371/journal.pgen.0010078
Genome-Wide Associations of Gene Expression Variation in HumansCited by: 483
Author(s): Barbara Elaine Stranger, Matthew S. Forrest, Andrew G. Clark, M. Minichiello, Samuel Deutsch, Robert Lyle, Sarah Hunt, Brenda F. Kahl, Stylianos E. Antonarakis, Simon Tavaré, Panos Deloukas, Emmanouil T. Dermitzakis
Software Mentions: 1
Published: over 20 years ago
10.1186/s13041-020-00595-4
Identification of a novel Shank2 transcriptional variant in Shank2 knockout mouse model of autism spectrum disorderCited by: 8
Author(s): Yong Seok Lee, Nam Kyung Yu, Jeewan Chun, Jung Eun Yang, Chae Seok Lim, Hyopil Kim, Gaeun Park, Jin A Lee, Kyung-Min Lee, Bong Kiun Kaang, Jae Hyung Lee
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pgen.1002748
The Chicken Frizzle Feather Is Due to an α-Keratin (KRT75) Mutation That Causes a Defective RachisCited by: 81
Author(s): Chen Siang Ng, Ping Wu, John Foley, Anne Foley, Merry-Lynn McDonald, Wen Tau Juan, Chih-Jen Huang, Yu Ting Lai, Wen Sui Lo, Chih Feng Chen, Suzanne M. Leal, Huanmin Zhang, Randall B. Widelitz, Pragna I. Patel, Wen-Hsiung Li, Cheng Ming Chuong
Software Mentions: 1
Published: about 14 years ago
10.1371/journal.pgen.1002532
Genome-Wide Association Study in East Asians Identifies Novel Susceptibility Loci for Breast CancerCited by: 142
Author(s): Jirong Long, Qiuyin Cai, Hyuna Sung, Jiajun Shi, Ben Zhang, Ji Yeob Choi, Wanqing Wen, Ryan Delahanty, Wei Lü, Yu Tang Gao, Hongbing Shen, Sung Sup Park, Kexin Chen, Chen Shen, Zefang Ren, Christopher A. Haiman, Keitaro Matsuo, Mi Kyung Kim, Ui‐Soon Khoo, Motoki Iwasaki, Ying Zheng, Yong Bing Xiang, Kai Gu, Nathaniel Rothman, Wenjing Wang, Zhibin Hu, Yao Liu, Keun Young Yoo, Dong Young Noh, Bok Ghee Han, Min Hyuk Lee, Hong Zheng, Lína Zhang, Pei Ei Wu, Ya Lan Shieh, Sum Yin Chan, Shenming Wang, Xiaoming Xie, Sung Won Kim, Brian E. Henderson, Loı̈c Le Marchand, Hidemi Ito, Yoshio Kasuga, Sei Hyun Ahn, Kang Han, Kelvin Y.K. Chan, Hiroji Iwata, Shoichiro Tsugane, Chun Li, Xiao Ou Shu, Dong Yoon Kang, Zheng Wang
Software Mentions: 1
Published: over 14 years ago
10.1186/1471-2148-12-231
The evolution of vertebrate somatostatin receptors and their gene regions involves extensive chromosomal rearrangementsCited by: 34
Author(s): Daniel Ocampo Daza, Görel Sundström, Christina Bergqvist, Dan Larhammar
Software Mentions: 1
Published: over 14 years ago
10.1038/srep12609
Identification of the miRNA targetome in hippocampal neurons using RIP-seqCited by: 28
Author(s): Josephine Malmevik, Rebecca Petri, Thies Klüssendorf, Pina Knauff, Malin Åkerblom, Jenny Johansson, Shamit Soneji, Johan Jakobsson
Software Mentions: 1
Published: about 11 years ago
10.1038/srep15215
Transcription factor and miRNA co-regulatory network reveals shared and specific regulators in the development of B cell and T cellCited by: 52
Author(s): Ying Lin, Qiong Zhang, Hongmei Zhang, Wei Liu, Chun–Jen Liu, Qiubai Li, An‐Yuan Guo
Software Mentions: 1
Published: almost 11 years ago
10.1371/journal.pgen.1006890
Xist RNA repeat E is essential for ASH2L recruitment to the inactive X and regulates histone modifications and escape gene expressionCited by: 24
Author(s): Minghui Yue, Akiyo Ogawa, Norishige Yamada, John Lalith Charles Richard, Artem Barski, Yasushi Ogawa
Software Mentions: 1
Published: about 9 years ago
10.1038/srep16432
Protein receptor-independent plasma membrane remodeling by HAMLET: a tumoricidal protein-lipid complexCited by: 22
Author(s): Aftab Nadeem, Jeremy Sanborn, Douglas L. Gettel, Ho C S James, Anna Rydström, Viviane N. Ngassam, Thomas Kjær Klausen, Stine Falsig Pedersen, Matti Lam, Atul N. Parikh, Catharina Svanborg
Software Mentions: 1
Published: almost 11 years ago
10.1038/srep19531
Panel-based NGS Reveals Novel Pathogenic Mutations in Autosomal Recessive Retinitis PigmentosaCited by: 46
Author(s): Raquel Pérez-Carro, Marta Cortón, Iker Sánchez‐Navarro, Olga Zurita, Noelia Sanchez-Bolivar, Rocío Sánchez-Alcudia, Stefan H. Lelieveld, Elena Aller, Miguel Ángel López-Martínez, Ma Isabel López-Molina, Patrícia José, Fiona Blanco‐Kelly, Rosa Riveiro-Álvarez, Christian Gilissen, José María Millán, Almudena Ávila-Fernández, Carmen Ayuso
Software Mentions: 1
Published: over 10 years ago
10.1093/molbev/msv265
Comparative Genomics Identifies Epidermal Proteins Associated with the Evolution of the Turtle ShellCited by: 43
Author(s): Karin Brigit Holthaus, Bettina Strasser, Wolfgang Sipos, Heiko A. Schmidt, Veronika Mlitz, Supawadee Sukseree, Anton Weissenbacher, Erwin Tschachler, Lorenzo Alibardi, Leopold Eckhart
Software Mentions: 1
Published: almost 11 years ago