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10.3389/fgene.2021.707644

Suppression of CPSF6 Enhances Apoptosis Through Alternative Polyadenylation-Mediated Shortening of the VHL 3′UTR in Gastric Cancer Cells
Cited by: 8
Author(s): Xinglong Shi, Keshuo Ding, Qiang Zhao, Pengxiao Li, Yani Kang, Sheng Tan, Jingyong Sun
Software Mentions: 1
Published: about 5 years ago

10.1186/s13015-019-0158-3

TMRS: an algorithm for computing the time to the most recent substitution event from a multiple alignment column
Cited by: 0
Author(s): Hisanori Kiryu, Yuto Ichikawa, Yasuhiro Kojima
Software Mentions: 1
Published: almost 7 years ago

10.1186/1471-2164-10-S3-S9

TTS Mapping: integrative WEB tool for analysis of triplex formation target DNA Sequences, G-quadruplets and non-protein coding regulatory DNA elements in the human genome
Cited by: 32
Author(s): Piroon Jenjaroenpun, Vladimir A. Kuznetsov
Software Mentions: 1
Published: almost 18 years ago

10.1111/acel.12607

The PPARγ-SETD8 axis constitutes an epigenetic, p53-independent checkpoint on p21-mediated cellular senescence
Cited by: 21
Author(s): Chieh Tien Shih, Ian Yi‐Feng Chang, Yi Tung Chen, Chung Pei, Hui-Wen Chen, Chang Ching Yang, Juu Chin Lu, Yau Sheng Tsai, Hua Chien Chen, Bertrand Chin‐Ming Tan
Software Mentions: 1
Published: over 9 years ago

10.1186/s12864-016-2627-0

CRISPRDetect: A flexible algorithm to define CRISPR arrays
Cited by: 245
Author(s): Ambarish Biswas, Raymond H.J. Staals, Sergio E. Morales, Peter C. Fineran, Chris M. Brown
Software Mentions: 1
Published: over 10 years ago

10.3389/fgene.2013.00054

Dysfunction of the Heteromeric KV7.3/KV7.5 Potassium Channel is Associated with Autism Spectrum Disorders
Cited by: 36
Author(s): Mette Gilling, Hanne B. Rasmussen, Kirstine Calloe, Ana Filipa Sequeira, Marta Baretto, Guiomar Oliveira, Joana Almeida, Marlene Briciet Lauritsen, Reinhard Ullmann, Susanne E. Boonen, Karen Brøndum‐Nielsen, Vera M. Kalscheuer, Zeynep Tümer, Astrid M. Vicente, Nicole Schmitt, Niels Tommerup
Software Mentions: 1
Published: almost 14 years ago

10.3389/fgene.2019.01105

Identification of Novel Microsatellite Markers Flanking the SMN1 and SMN2 Duplicated Region and Inclusion Into a Single-Tube Tridecaplex Panel for Haplotype-Based Preimplantation Genetic Testing of Spinal Muscular Atrophy
Cited by: 2
Author(s): Mingjue Zhao, Mulias Lian, Foong Koon Cheah, Arnold S.C. Tan, Anupriya Agarwal, Samuel S. Chong
Software Mentions: 1
Published: about 7 years ago

10.1186/1471-2164-10-209

ChlamyCyc: an integrative systems biology database and web-portal for Chlamydomonas reinhardtii
Cited by: 80
Author(s): Patrick May, Jan-Ole Christian, Stefan Kempa, Dirk Walther
Software Mentions: 1
Published: almost 18 years ago

10.1186/s12864-018-4886-4

H4K20me3 co-localizes with activating histone modifications at transcriptionally dynamic regions in embryonic stem cells
Cited by: 22
Author(s): Jian Xu, Benjamin L. Kidder
Software Mentions: 1
Published: over 8 years ago

10.1186/s12864-020-6688-8

Discovering candidate imprinted genes and imprinting control regions in the human genome
Cited by: 4
Author(s): Minou Bina
Software Mentions: 1
Published: over 6 years ago

10.3389/fgene.2019.00547

Novel SCN5A Frameshift Mutation in Brugada Syndrome Associated With Complex Arrhythmic Phenotype
Cited by: 9
Author(s): Emanuele Micaglio, Michelle M. Monasky, Giuseppe Ciconte, Gabriele Vicedomini, Manuel Conti, Valerio Mecarocci, Luigi Giannelli, Federica Giordano, Alberto Pollina, Massimo Saviano, Paolo Pozzi, Chiara Di Resta, Sara Benedetti, Maurizio Ferrari, Vincenzo Santinelli, Carlo Pappone
Software Mentions: 1
Published: over 7 years ago

10.1186/1471-2164-10-46

A multiway analysis for identifying high integrity bovine BACs
Cited by: 2
Author(s): Abhirami Ratnakumar, Wesley C. Barris, Sean McWilliam, Rüdiger Bräuning, John C. McEwan, W. M. Snelling, Brian P. Dalrymple
Software Mentions: 1
Published: almost 18 years ago

10.1186/1471-2164-5-99

Arrays of ultraconserved non-coding regions span the loci of key developmental genes in vertebrate genomes
Cited by: 292
Author(s): Albin Sandelin, Peter J. Bailey, Sara Bruce, Pär G. Engström, Joanna M. Klos, Wyeth W. Wasserman, Johan Ericson, Boris Lenhard
Software Mentions: 1
Published: almost 22 years ago

10.1186/1471-2164-13-688

CBS: an open platform that integrates predictive methods and epigenetics information to characterize conserved regulatory features in multiple Drosophila genomes
Cited by: 1
Author(s): Enrique Blanco, Montserrat Corominas
Software Mentions: 1
Published: almost 15 years ago

10.1186/s12863-019-0749-5

In silico genome-wide miRNA-QTL-SNPs analyses identify a functional SNP associated with mastitis in Holsteins
Cited by: 12
Author(s): Qiang Jiang, Han Zhao, Rongling Li, Yaran Zhang, Yong Liu, Jinpeng Wang, Xiuge Wang, Zhihua Ju, Wenhao Liu, Minghai Hou, Jinming Huang
Software Mentions: 1
Published: over 7 years ago

10.18632/aging.101470

Integrated DNA methylation and gene expression analysis identifies SLAMF7 as a key regulator of atherosclerosis
Cited by: 13
Author(s): Zhangyong Xia, Minghong Gu, Xiaodong Jia, Xiaoting Wang, Chunxia Wu, Jiangwen Guo, Liyong Zhang, Yifeng Du, Jiyue Wang
Software Mentions: 1
Published: over 8 years ago

10.18502/jovr.v15i2.6730

Screening for Novel LOX and SOD1 Variants in Keratoconus Patients from Brazil
Cited by: 8
Author(s): Diego Nery Benevides Gadelha, Alex Felipe Barbosa Feitosa, Rafaela Gomes da Silva, Luana Talita Antunes, Matheus Cavalcanti Muniz, Matheus Alencar de Oliveira, Dáfine de Oliveira Andrade, Nathalia Mayanna da Paz Silva, Sebastião Cronemberger, Bruno Luiz Fonseca Schamber-Reis
Software Mentions: 1
Published: over 6 years ago

10.3389/fgene.2021.699894

Case Report: Novel NIPBL Variants Cause Cornelia de Lange Syndrome in Chinese Patients
Cited by: 2
Author(s): Ying Peng, Changbiao Liang, Hui Xi, Shunli Yang, Junfeng Hu, Jialun Pang, Jing Liu, Yingchun Luo, Chengyuan Tang, Wanqin Xie, Hua Wang
Software Mentions: 1
Published: over 5 years ago

10.3389/fgene.2020.627007

Human Ubiquitin-Specific Peptidase 18 Is Regulated by microRNAs via the 3'Untranslated Region, A Sequence Duplicated in Long Intergenic Non-coding RNA Genes Residing in chr22q11.21
Cited by: 11
Author(s): Erminia Rubino, Melania Cruciani, Nicolas Tchitchek, Anna Le Tortorec, Antoine Rolland, Önay Veli, Leslie Vallet, Giulia Gaggi, Frédérique Michel, Nathalie Dejucq-Rainsford, Sandra Pellegrini
Software Mentions: 1
Published: almost 6 years ago

10.3389/fgene.2014.00344

Nuclear and mitochondrial tRNA-lookalikes in the human genome
Cited by: 32
Author(s): Aristeidis G. Telonis, Phillipe Loher, Yohei Kirino, Isidore Rigoutsos
Software Mentions: 1
Published: about 12 years ago

10.3389/fgene.2020.00967

Ethnic and Adipose Depot Specific Associations Between DNA Methylation and Metabolic Risk
Cited by: 7
Author(s): Carmen Pheiffer, Tarryn Willmer, Stephanie Dias, Yoonus Abrahams, Johan Louw, Julia H. Goedecke
Software Mentions: 1
Published: about 6 years ago

10.1016/j.isci.2019.10.055

Deciphering the Gene Regulatory Landscape Encoded in DNA Biophysical Features
Cited by: 7
Author(s): Abhijeet Pataskar, Willem Vanderlinden, Johannes Friedrich Emmerig, Aditi Singh, Jan Lipfert, Vijay Tiwari
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-017-12532-y

SHH signaling directed by two oral epithelium-specific enhancers controls tooth and oral development
Cited by: 22
Author(s): Tomoko Sagai, Takanori Amano, Akiteru Maeno, Hiroshi Kanazawa, Hye-Jin Seo, Sung Won Cho, Toshihiko Shiroishi
Software Mentions: 1
Published: about 9 years ago

10.3389/fgene.2018.00009

An Update on Phosphodiesterase Mutations Underlying Genetic Etiology of Hearing Loss and Retinitis Pigmentosa
Cited by: 4
Author(s): Rahul Mittal, Nicole Bencie, James M. Parrish, George Liu, Jeenu Mittal, Denise Yan, Xue Zhong Liu
Software Mentions: 1
Published: almost 9 years ago

10.1186/s12863-016-0404-3

Multiple regulatory variants located in cell type-specific enhancers within the PKP2 locus form major risk and protective haplotypes for canine atopic dermatitis in German shepherd dogs
Cited by: 7
Author(s): Katarina Tengvall, Sergey V. Kozyrev, Marcin Kierczak, Kerstin Bergvall, Fabiana H.G. Farias, Brita Ardesjö-Lundgren, Mia Olsson, Eva Murén, Ragnvi Hagman, Tosso Leeb, Gerli Pielberg, Åke Hedhammar, Gerhard Andersson, Kerstin Lindblad‐Toh
Software Mentions: 1
Published: over 10 years ago

10.1186/s12863-020-00868-w

Identification and genetic analysis of qCL1.2, a novel allele of the “green revolution” gene SD1 from wild rice (Oryza rufipogon) that enhances plant height
Cited by: 14
Author(s): Lizhen Zhang, Jingfen Huang, Yanyan Wang, Rui Xu, Ziyi Yang, Zhigang Zhao, Shijia Liu, Yunlu Tian, Xiaoming Zheng, Fĕi Li, Junrui Wang, Yue Song, Jiaqi Li, Yongxia Cui, Lifang Zhang, Yunlian Cheng, Jinhao Lan, Weihua Qiao, Qing Yang
Software Mentions: 1
Published: over 6 years ago

10.1186/s12863-020-00913-8

Molecular basis of a new ovine model for human 3M syndrome-2
Cited by: 3
Author(s): Shernae A. Woolley, Steven Hayes, M. R. Shariflou, F. W. Nicholas, Cali E. Willet, Brendon A. O’Rourke, Imke Tammen
Software Mentions: 1
Published: about 6 years ago

10.1186/1471-2156-9-6

A hierarchical and modular approach to the discovery of robust associations in genome-wide association studies from pooled DNA samples
Cited by: 24
Author(s): Paola Sebastiani, Zhenming Zhao, María M. Abad‐Grau, Alberto Riva, Stephen W. Hartley, Amanda Sedgewick, Alessandro Doria, Monty Montano, Efthymia Melista, Dellara F. Terry, Thomas T. Perls, Martin H. Steinberg, Clinton T. Baldwin
Software Mentions: 1
Published: almost 19 years ago

10.1186/1471-2156-8-78

SERpredict: Detection of tissue- or tumor-specific isoforms generated through exonization of transposable elements
Cited by: 34
Author(s): Britta Mersch, Noa Sela, Gil Ast, Sándor Suhai, Agnes Hotz‐Wagenblatt
Software Mentions: 1
Published: about 19 years ago

10.3389/fgene.2021.647246

Associations Between Genotype and Peripheral Complement Proteins in First-Episode Psychosis: Evidences From C3 and C4
Cited by: 3
Author(s): Yu Chen, Zhenguo Zhao, Lin Fen, Lifang Wang, Zheng Lin, Weihua Yue
Software Mentions: 1
Published: over 5 years ago

10.1186/1471-2148-12-231

The evolution of vertebrate somatostatin receptors and their gene regions involves extensive chromosomal rearrangements
Cited by: 34
Author(s): Daniel Ocampo Daza, Görel Sundström, Christina Bergqvist, Dan Larhammar
Software Mentions: 1
Published: almost 15 years ago

10.1186/1471-2148-5-22

Cited by: 21
Author(s): Michael E. Bradley, Steven A. Benner
Software Mentions: 1
Published: almost 22 years ago

10.1186/s12862-015-0437-7

Evolution of the unspliced transcriptome
Cited by: 7
Author(s): Jan Engelhardt, Peter F. Stadler
Software Mentions: 1
Published: about 11 years ago

10.1186/s12862-020-01624-5

The amylase gene cluster in house mice (Mus musculus) was subject to repeated introgression including the rescue of a pseudogene
Cited by: 2
Author(s): Miriam Linnenbrink, Kristian K. Ullrich, Ellen McConnell, Diethard Tautz
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2148-13-19

Impact of constitutional copy number variants on biological pathway evolution
Cited by: 14
Author(s): Maria Poptsova, Samprit Banerjee, Ömer Gökçümen, Mark A. Rubin, Francesca Demichelis
Software Mentions: 1
Published: almost 14 years ago

10.3389/fgene.2019.01097

Hypermethylation of N-Acetyltransferase 1 Is a Prognostic Biomarker in Colon Adenocarcinoma
Cited by: 9
Author(s): Cheng Shi, Liyang Xie, Yanping Tang, Long Long, Jilin Li, Bang-li Hu, Kezhi Li
Software Mentions: 1
Published: about 7 years ago

10.1186/s12862-015-0528-5

Selective sweeps versus introgression - population genetic dynamics of the murine leukemia virus receptor Xpr1 in wild populations of the house mouse (Mus musculus)
Cited by: 9
Author(s): Natascha Hasenkamp, Terry Solomon, Diethard Tautz
Software Mentions: 1
Published: about 11 years ago

10.1186/s13048-021-00834-9

p38β - MAPK11 and its role in female cancers
Cited by: 11
Author(s): Periklis Katopodis, Rachel Kerslake, Athanasios Zikopoulos, Nefeli Eirini Beri, Vladimir Anikin
Software Mentions: 1
Published: over 5 years ago

10.18632/oncotarget.7715

P300 acetyltransferase regulates fatty acid synthase expression, lipid metabolism and prostate cancer growth
Cited by: 41
Author(s): Xiaokun Gang, Yinhui Yang, Jian Zhong, Kui Jiang, Yunqian Pan, Jeffrey Karnes, Jun Zhang, Wanhai Xu, Guixia Wang, Haojie Huang
Software Mentions: 1
Published: over 10 years ago

10.3389/fgene.2015.00338

Identification of Low-Confidence Regions in the Pig Reference Genome (Sscrofa10.2)
Cited by: 26
Author(s): Amanda Warr, Christelle Robert, David Hume, Alan Archibald, Nader Deeb, Michael Watson
Software Mentions: 1
Published: almost 11 years ago

10.18632/oncotarget.7937

Tumor-promoting function and prognostic significance of the RNA-binding protein T-cell intracellular antigen-1 in esophageal squamous cell carcinoma
Cited by: 17
Author(s): Junichi Hamada, Katsutoshi Shoda, Kiyoshi Masuda, Yuji Fujita, Takuya Naruto, Tomohiro Kohmoto, Yuko Miyakami, Miki Watanabe, Yasusei Kudo, Hitoshi Fujiwara, Daisuke Ichikawa, Eigo Otsuji, Issei Imoto
Software Mentions: 1
Published: over 10 years ago

10.1186/1471-2148-11-308

Abundance of ultramicro inversions within local alignments between human and chimpanzee genomes
Cited by: 11
Author(s): Yuichiro Hara, Tadashi Imanishi
Software Mentions: 1
Published: almost 16 years ago

10.3389/fgene.2021.714491

Chromosome X-wide Analysis of Positive Selection in Human Populations: Common and Private Signals of Selection and its Impact on Inactivated Genes and Enhancers
Cited by: 1
Author(s): Pablo Villegas-Mirón, Sandra Acosta, Jessica Nye, Jaume Bertranpetit, Hafid Laayouni
Software Mentions: 1
Published: about 5 years ago

10.3389/fgene.2017.00202

Recombination Is Responsible for the Increased Recovery of Drug-Resistant Mutants with Hypermutated Genomes in Resting Yeast Diploids Expressing APOBEC Deaminases
Cited by: 5
Author(s): Artem G. Lada, Elena I. Stepchenkova, Anna S. Zhuk, Sergei Kliver, Igor B. Rogozin, Dmitrii E. Polev, Alok Dhar, Youri I. Pavlov
Software Mentions: 1
Published: almost 9 years ago

10.18632/oncotarget.7764

Associations between polymorphisms of long non-coding RNA MEG3 and risk of colorectal cancer in Chinese
Cited by: 53
Author(s): Xin Cao, Shulin Zhuang, Yong Hu, Xi Liu, Lichun Deng, Sheng Huaming, Weisheng Shen
Software Mentions: 1
Published: over 10 years ago

10.1186/1750-1172-7-S2-A11

Speeding up research with the Semantic Web
Cited by: 1
Author(s): Marco Roos, Erik Schultes, Barend Mons
Software Mentions: 1
Published: almost 15 years ago

10.1186/1471-2148-14-137

The dynamic proliferation of CanSINEs mirrors the complex evolution of Feliforms
Cited by: 6
Author(s): Kathryn B. Walters-Conte, Diana Johnson, Warren E. Johnson, Stephen J. O’Brien, Jill Pecon-Slattery
Software Mentions: 1
Published: almost 13 years ago

10.3389/fimmu.2019.01573

Prognostic Significance of Potential Immune Checkpoint Member HHLA2 in Human Tumors: A Comprehensive Analysis
Cited by: 27
Author(s): Ben Wang, Zhujie Ran, Mengmeng Liu, Yunsheng Ou
Software Mentions: 1
Published: over 7 years ago

10.3389/fimmu.2018.02906

Long Non-coding RNAs Are Central Regulators of the IL-1β-Induced Inflammatory Response in Normal and Idiopathic Pulmonary Lung Fibroblasts
Cited by: 41
Author(s): Marina R. Hadjicharalambous, Benoı̂t Roux, Carol Feghali‐Bostwick, Lynne A. Murray, D. S. Clarke, Mark A. Lindsay
Software Mentions: 1
Published: almost 8 years ago

10.1186/1471-2148-10-73

A non-tree-based comprehensive study of metazoan Hox and ParaHox genes prompts new insights into their origin and evolution
Cited by: 26
Author(s): Morgane Thomas‐Chollier, Valérie Ledent, Luc Leyns, Michel Vervoort
Software Mentions: 1
Published: almost 17 years ago

10.3389/fimmu.2018.02437

Vaginal Lactobacilli Induce Differentiation of Monocytic Precursors Toward Langerhans-like Cells: in Vitro Evidence
Cited by: 13
Author(s): Jie‐Young Song, Fengchao Lang, Na Zhao, Yan Guo, Huatang Zhang
Software Mentions: 1
Published: about 8 years ago

10.1186/1471-2148-10-157

Functional conservation of a forebrain enhancer from the elephant shark (Callorhinchus milii) in zebrafish and mice
Cited by: 11
Author(s): R. Macdonald, Mélanie Debiais-Thibaud, Kyle J. Martin, Luc Poitras, Boon-Hui Tay, Byrappa Venkatesh, Marc Ekker
Software Mentions: 1
Published: over 16 years ago

10.3389/fimmu.2013.00416

A Guide to Bioinformatics for Immunologists
Cited by: 12
Author(s): Fiona Whelan, Nicholas V. L. Yap, Michael G. Surette, G. Brian Golding, Dawn M. E. Bowdish
Software Mentions: 1
Published: almost 14 years ago

10.1186/1471-2148-9-195

A fungal phylogeny based on 82 complete genomes using the composition vector method
Cited by: 185
Author(s): Hao Wang, Zhonghui Xu, Lei Gao, Bailin Hao
Software Mentions: 1
Published: over 17 years ago

10.1186/1471-2148-8-17

A genome-wide screen for noncoding elements important in primate evolution
Cited by: 91
Author(s): Eliot C. Bush, Bruce T. Lahn
Software Mentions: 1
Published: almost 19 years ago

10.1186/1471-2148-14-74

An evolutionarily biased distribution of miRNA sites toward regulatory genes with high promoter-driven intrinsic transcriptional noise
Cited by: 18
Author(s): Hossein Zare, Arkady B. Khodursky, Vittorio Sartorelli
Software Mentions: 1
Published: almost 13 years ago

10.1186/1471-2148-13-238

The vertebrate ancestral repertoire of visual opsins, transducin alpha subunits and oxytocin/vasopressin receptors was established by duplication of their shared genomic region in the two rounds of early vertebrate genome duplications
Cited by: 103
Author(s): David Lagman, Daniel Ocampo Daza, Jenny Widmark, Xesús M. Abalo, Görel Sundström, Dan Larhammar
Software Mentions: 1
Published: about 13 years ago

10.3389/fimmu.2019.00409

Differential Requirement of Cd8 Enhancers E8I and E8VI in Cytotoxic Lineage T Cells and in Intestinal Intraepithelial Lymphocytes
Cited by: 3
Author(s): Alexandra Franziska Gülich, Teresa Preglej, Patricia Hamminger, Marlis Alteneder, Caroline Tizian, Maria Jonah Orola, Sawako Muroi, Ichiro Taniuchi, Wilfried Ellmeier, Shoji Sakaguchi
Software Mentions: 1
Published: over 7 years ago

10.18632/aging.101671

A CREB1/miR-433 reciprocal feedback loop modulates proliferation and metastasis in colorectal cancer
Cited by: 31
Author(s): Yan Li, Weiqiang You, Nengquan Sheng, Jianfeng Gong, Landian Hu, Gewen Tan, Hongqi Chen, Zhigang Wang
Software Mentions: 1
Published: almost 8 years ago

10.1186/1471-2148-7-S1-S14

Comparative analysis of genome tiling array data reveals many novel primate-specific functional RNAs in human
Cited by: 20
Author(s): Zhaolei Zhang, Andy Wing Chun Pang, Mark Gerstein
Software Mentions: 1
Published: almost 20 years ago

10.3389/fimmu.2018.02601

The Pleiotropic Immunomodulatory Functions of IL-33 and Its Implications in Tumor Immunity
Cited by: 73
Author(s): Claudia Afferni, Carla Buccione, Sara Andreone, Maria Rosaria Galdiero, Gilda Varricchi, Gianni Marone, Fabrizio Mattei, Giovanna Schiavoni
Software Mentions: 1
Published: about 8 years ago

10.3389/fimmu.2019.02416

Condemned or Not to Die? Gene Polymorphisms Associated With Cell Death in Pemphigus Foliaceus
Cited by: 14
Author(s): Valéria Bumiller-Bini, Gabriel Adelman Cipolla, M Spadoni, Danillo G. Augusto, María Luiza Petzl-Erler, Márcia Holsbach Beltrame, Angelica Beate Winter Boldt
Software Mentions: 1
Published: about 7 years ago

10.3389/fimmu.2020.02176

Dynamic and Differential Expression of Duplicated Cxcr4/Cxcl12 Genes Facilitates Antiviral Response in Hexaploid Gibel Carp
Cited by: 10
Author(s): Wei-Jia Lu, Li Zhou, Fan-Xiang Gao, Yanmin Zhou, Zhi Li, Xiaojuan Zhang, Yang Wang, Jian‐Fang Gui
Software Mentions: 1
Published: about 6 years ago

10.3389/fimmu.2012.00260

Chromatinized Protein Kinase C-θ: Can It Escape the Clutches of NF-κB?
Cited by: 19
Author(s): Elissa L Sutcliffe, Jasmine Li, Anjum Zafar, Kristine Hardy, Reena Ghildyal, Robert McCuaig, Nicole C. Norris, Pek Siew Lim, Peter J. Milburn, Marco G. Casarotto, Gareth Denyer, Sudha Rao
Software Mentions: 1
Published: almost 15 years ago

10.1186/1471-2148-14-11

Evolutionary classification of ammonium, nitrate, and peptide transporters in land plants
Cited by: 107
Author(s): Neil J J B von Wittgenstein, Cuong H. Le, Barbara J. Hawkins, Jürgen Ehlting
Software Mentions: 1
Published: almost 13 years ago

10.3389/fimmu.2013.00291

Bioinformatics Analysis of the Factors Controlling Type I IFN Gene Expression in Autoimmune Disease and Virus-Induced Immunity
Cited by: 19
Author(s): Di Feng, Betsy J. Barnes
Software Mentions: 1
Published: almost 14 years ago

10.1186/1471-2148-8-46

Rapid bursts of androgen-binding protein (Abp) gene duplication occurred independently in diverse mammals
Cited by: 42
Author(s): Christina M. Laukaitis, Andreas Heger, Tyler D Blakley, Pavel Munclinger, Chris P. Ponting, Robert C. Karn
Software Mentions: 1
Published: almost 19 years ago

10.1186/s12862-018-1147-8

Tracing the evolution of the heterotrimeric G protein α subunit in Metazoa
Cited by: 16
Author(s): Alyssa D. Lokits, Henrike Indrischek, Jens Meiler, Heidi E. Hamm, Peter F. Stadler
Software Mentions: 1
Published: over 8 years ago

10.1186/s13023-015-0251-8

Rare diseases in ICD11: making rare diseases visible in health information systems through appropriate coding
Cited by: 84
Author(s): Ségolène Aymé, Bertrand Bellet, Ana Rath
Software Mentions: 1
Published: over 11 years ago

10.1186/1471-2148-12-62

Genomic characterization of the European sea bass Dicentrarchus labrax reveals the presence of a novel uncoupling protein (UCP) gene family member in the teleost fish lineage
Cited by: 11
Author(s): Mbaye Tine, Heiner Kuhl, Martin Jastroch, Richard Reinhardt
Software Mentions: 1
Published: almost 15 years ago

10.3389/fmicb.2020.01209

Small RNAs in Outer Membrane Vesicles and Their Function in Host-Microbe Interactions
Cited by: 32
Author(s): Sara Ahmadi Badi, Stefania Paola Bruno, Arfa Moshiri, Samira Tarashi, Seyed Davar Siadat, Andrea Masotti
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2148-9-217

BigFoot: Bayesian alignment and phylogenetic footprinting with MCMC
Cited by: 26
Author(s): Rahul Satija, Adam M. Novak, István Miklós, Rune B. Lyngsø, Jotun Hein
Software Mentions: 1
Published: almost 18 years ago

10.3389/fmicb.2017.01177

Comparative Genomics Identifies a Novel Conserved Protein, HpaT, in Proteobacterial Type III Secretion Systems that Do Not Possess the Putative Translocon Protein HrpF
Cited by: 18
Author(s): Céline Pesce, Jonathan M. Jacobs, Edwige Berthelot, Marion Perret, Taca Vancheva, Claude Bragard, Ralf Koebnik
Software Mentions: 1
Published: over 9 years ago

10.3389/fmicb.2020.582022

The 23S Ribosomal RNA From Pyrococcus furiosus Is Circularly Permuted
Cited by: 9
Author(s): Ulf Birkedal, Bertrand Beckert, Daniel N. Wilson, Henrik Nielsen
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2019.00707

The Lactococcus lactis Pan-Plasmidome
Cited by: 21
Author(s): Philip Kelleher, Jennifer Mahony, Francesca Bottacini, Gabriele Andrea Lugli, Marco Ventura, Douwe van Sinderen
Software Mentions: 1
Published: over 7 years ago

10.3390/nu5051706

Genome-Wide Association Study of Serum Selenium Concentrations
Cited by: 9
Author(s): Jian Gong, Li Hsu, Tabitha A. Harrison, Irena B. King, Stefan Stürup, Xiaoling Song, David Duggan, Yan Liu, Carolyn M. Hutter, Stephen J. Chanock, Charles B. Eaton, James R. Marshall, Ulrike Peters
Software Mentions: 1
Published: over 13 years ago

10.3389/fmicb.2018.00383

Comparative Genomics of Environmental and Clinical Burkholderia cenocepacia Strains Closely Related to the Highly Transmissible Epidemic ET12 Lineage
Cited by: 15
Author(s): Josselin Bodilis, Elodie Denet, Elisabeth Brothier, Arnault Graindorge, Sabine Favre-Bonté, Sylvie Nazaret
Software Mentions: 1
Published: over 8 years ago

10.1186/s12861-016-0119-8

Expression and knockdown of zebrafish folliculin suggests requirement for embryonic brain morphogenesis
Cited by: 3
Author(s): Emma J. Kenyon, Monique Luijten, Harmeet Gill, Nan Li, Matthew Rawlings, James C. Bull, Yavor Hadzhiev, M.A.M. van Steensel, Eamonn R. Maher, Ferenc Müller
Software Mentions: 1
Published: over 10 years ago

10.3389/fmicb.2019.01313

Continuous Culture Adaptation of Methylobacterium extorquens AM1 and TK 0001 to Very High Methanol Concentrations
Cited by: 15
Author(s): Sophia Belkhelfa, David Roche, Ivan Dubois, Anne Berger, Valérie Delmas, Laurence Cattolico, Alain Perret, Karine Labadie, Aude Perdereau, Ekaterina Darii, Emilie Pateau, Véronique de Berardinis, Marcel Salanoubat, Madeleine Bouzon, Volker Döring
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2020.00043

RcLS2F – A Novel Fungal Class 1 KDAC Co-repressor Complex in Aspergillus nidulans
Cited by: 8
Author(s): Ingo Bauer, Silke Gross, Petra Merschak, Leopold Kremser, Betim Karahoda, Özgür Bayram, Beate Abt, Ulrike Binder, Fabio Gsaller, Herbert Lindner, Gerald Brosch, Stefan Graessle
Software Mentions: 1
Published: almost 7 years ago

10.3389/fmicb.2020.01858

CoronaVR: A Computational Resource and Analysis of Epitopes and Therapeutics for Severe Acute Respiratory Syndrome Coronavirus-2
Cited by: 21
Author(s): Amit Gupta, Mohammad Shoaib Khan, Shubham Choudhury, Adhip Mukhopadhyay, . Sakshi, Amber Rastogi, Ashwani Kumar Thakur, Pallawi Kumari, Manmeet Kaur, . Shalu, Chanchal Saini, Vandna Sapehia, Barkha, Pradeep Kumar Patel, Kailash T. Bhamare, Manoj Kumar
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2016.01411

Investigating the Inactivation Mechanism of Bacillus subtilis Spores by High Pressure CO2
Cited by: 10
Author(s): Lei Rao, Feng Zhao, Yongtao Wang, Fang Chen, Xiaosong Hu, Xiaojun Liao
Software Mentions: 1
Published: about 10 years ago

10.3389/fmolb.2021.693651

Pan-Cancer Analysis Identified C1ORF112 as a Potential Biomarker for Multiple Tumor Types
Cited by: 8
Author(s): Jiaxuan Chen, Haoming Mai, Haitao Chen, Bin Zhou, Jinlin Hou, Deke Jiang
Software Mentions: 1
Published: about 5 years ago

10.18632/oncotarget.11324

The cytokine-cosmc signaling axis upregulates the tumor-associated carbohydrate antigen Tn
Cited by: 4
Author(s): Chia Wen Ho, Chia‐Hua Lin, Yi Wei Liaw, Hsiao Ling Chiang, Yu Tang Chin, Rui Huang, Hung Cheng Lai, Yaw Wen Hsu, Po Jan Kuo, Chiao-En Chen, Hung Yun Lin, Jacqueline Whang‐Peng, Shin Nieh, Earl Fu, Leroy F. Liu, Jaulang Hwang
Software Mentions: 1
Published: about 10 years ago

10.1155/2014/259382

Structural Differences Observed in Arboviruses of the Alphavirus and Flavivirus Genera
Cited by: 18
Author(s): Raquel Hernandez, Dennis T. Brown, Angel Paredes
Software Mentions: 1
Published: almost 13 years ago

10.1038/s41598-017-10339-5

The PDK1 Inhibitor Dichloroacetate Controls Cholesterol Homeostasis Through the ERK5/MEF2 Pathway
Cited by: 23
Author(s): Asaad Khan, Nerea Allende-Vega, Delphine Gitenay, Sabine Gerbal‐Chaloin, Claire Gondeau, Dang Nghiem Vo, Sana Belkahla, Stefania Orecchioni, Giovanna Talarico, Francesco Bertolini, Milica Božić, José M. Valdivielso, Fabienne Bejjani, Isabelle Jariel, Isabel C. López-Mejía, Lluís Fajas, Charles-Henri Lecellier, Javier Hernandez, Martine Daujat, Martín Villalba
Software Mentions: 1
Published: about 9 years ago

10.1186/1471-213X-8-46

Axon-bearing and axon-less horizontal cell subtypes are generated consecutively during chick retinal development from progenitors that are sensitive to follistatin
Cited by: 35
Author(s): Per-Henrík Edqvist, Madelen Lek, Henrik Boije, Sarah M Lindbäck, Finn Hallböök
Software Mentions: 1
Published: over 18 years ago

10.3389/fnmol.2018.00404

Antidepressant but Not Prophylactic Ketamine Administration Alters Calretinin and Calbindin Expression in the Ventral Hippocampus
Cited by: 11
Author(s): Christina T LaGamma, William C. Tang, Ashlea A. Morgan, Josephine C. McGowan, Rebecca A. Brachman, Christine A. Denny
Software Mentions: 1
Published: about 8 years ago

10.3389/fncir.2015.00078

A 3D Searchable Database of Transgenic Zebrafish Gal4 and Cre Lines for Functional Neuroanatomy Studies
Cited by: 103
Author(s): Gregory D. Marquart, Kathryn M. Tabor, Mary Elizabeth Brown, Jennifer L Strykowski, Gaurav K. Varshney, Thomas Mueller, Shawn M. Burgess, Shin‐ichi Higashijima, Harold A. Burgess
Software Mentions: 1
Published: almost 11 years ago

10.3389/fnins.2016.00441

Evaluation of Different EEG Acquisition Systems Concerning Their Suitability for Building a Brain–Computer Interface: Case Studies
Cited by: 34
Author(s): Andreas Pinegger, Selina Wriessnegger, Josef Faller, Gernot Müller-Putz
Software Mentions: 1
Published: about 10 years ago

10.3389/fnins.2020.00818

Exploring the Role of Chemokine Receptor 6 (Ccr6) in the BXD Mouse Model of Gulf War Illness
Cited by: 4
Author(s): Jun Gao, Fuyi Xu, Athena Starlard‐Davenport, Diane B. Miller, James P. O’Callaghan, Byron C. Jones, Lu Lu
Software Mentions: 1
Published: over 6 years ago

10.3389/fnins.2018.00940

The Roles of the Kisspeptin System in the Reproductive Physiology of the Lined Seahorse (Hippocampus erectus), an Ovoviviparous Fish With Male Pregnancy
Cited by: 17
Author(s): Huixian Zhang, Bo Zhang, Geng Qin, Shuisheng Li, Qiang Lin
Software Mentions: 1
Published: almost 8 years ago

10.3389/fonc.2021.655709

Identification of BRCA1:c.5470_5477del as a Founder Mutation in Chinese Ovarian Cancer Patients
Cited by: 4
Author(s): Jun Li, Sile Han, Cuiyun Zhang, Yanlin Luo, Li Wang, Ping Wang, Yi Wang, Qingxin Xia, Xiaoyan Wang, Bing Wei, Jie Ma, Hongle Li, Yongjun Guo
Software Mentions: 1
Published: over 5 years ago

10.3389/fonc.2016.00228

Potential Mechanisms underlying the Protective Effect of Pregnancy against Breast Cancer: A Focus on the IGF Pathway
Cited by: 7
Author(s): Tiffany A. Katz
Software Mentions: 1
Published: about 10 years ago

10.3389/fphar.2020.584595

Exploring the Irish National Folklore Ethnography Database (Dúchas) for Open Data Research on Traditional Medicine Use in Post-Famine Ireland: An Early Example of Citizen Science
Cited by: 4
Author(s): Aaron Koay, Fiona Shannon, Astrid Sasse, Michael Heinrich, Helen Sheridan
Software Mentions: 1
Published: about 6 years ago

10.3389/fphar.2019.00443

Sphingomyelin Synthase 1 (SMS1) Downregulation Is Associated With Sphingolipid Reprogramming and a Worse Prognosis in Melanoma
Cited by: 21
Author(s): Fatima Bilal, Anne Montfort, Julia Gilhodes, Virginie Garcia, Joëlle Riond, Stéphane Carpentier, Thomas Filleron, Céline Colacios, Thierry Levade, Ahmad Daher, Nicolas Meyer, Nathalie Andrieu‐Abadie, Bruno Ségui
Software Mentions: 1
Published: over 7 years ago

10.1186/1471-213X-9-11

Trichostatin A treatment of cloned mouse embryos improves constitutive heterochromatin remodeling as well as developmental potential to term
Cited by: 79
Author(s): Walid E. Maalouf, Zichuan Liu, Vincent Brochard, Jean‐Paul Renard, Pascale Debey, Nathalie Beaujean, Daniele Zink
Software Mentions: 1
Published: almost 18 years ago

10.3389/fphys.2019.00666

Genotype/Phenotype Relationship in a Consanguineal Family With Brugada Syndrome Harboring the R1632C Missense Variant in the SCN5A Gene
Cited by: 11
Author(s): Michelle M. Monasky, Emanuele Micaglio, Giuseppe Ciconte, Sara Benedetti, Chiara Di Resta, Gabriele Vicedomini, Valeria Borrelli, Andrea Ghiroldi, Marco Piccoli, Luigi Anastasia, Vincenzo Santinelli, Maurizio Ferrari, Carlo Pappone
Software Mentions: 1
Published: over 7 years ago

10.3389/fphys.2019.01588

Renal Glomerular Mitochondria Function in Salt-Sensitive Hypertension
Cited by: 16
Author(s): Mark Domondon, Iuliia Polina, Anna B. Nikiforova, Regina Sultanova, Claudia Krüger, Valeria Y. Vasileva, M. V. Fomin, Gyda Beeson, Anna‐Liisa Nieminen, Nancy Smythe, Eduardo N. Maldonado, Krisztián Stadler, Daria V. Ilatovskaya
Software Mentions: 1
Published: almost 7 years ago

10.3389/fphys.2014.00258

Control elements targeting Tgfb3 expression to the palatal epithelium are located intergenically and in introns of the upstream Ift43 gene
Cited by: 11
Author(s): Jamie Lane, Kenji Yumoto, Justin Pisano, Mohamad Azhar, Penny S. Thomas, Vesa Kaartinen
Software Mentions: 1
Published: over 12 years ago

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