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10.1371/journal.pone.0204312

Characterization of zebrafish (Danio rerio) muscle ankyrin repeat proteins reveals their conserved response to endurance exercise
Cited by: 11
Author(s): S. Bošković, Rubén Marín-Juez, Jovana Jasnic-Savovic, Sven Reischauer, Hadil El-Sammak, Ana Kojic, Georgine Faulkner, Dragica Radojković, Didier Y. R. Stainier, Snežana Kojić
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0023087

Copy Number Variation across European Populations
Cited by: 26
Author(s): Wanting Chen, Caroline Hayward, Alan F. Wright, Andrew A. Hicks, Véronique Vitart, Sara Knott, Sarah H. Wild, Peter P. Pramstaller, James F. Wilson, Igor Rudan, David J. Porteous
Software Mentions: 1
Published: about 15 years ago

10.1186/1471-2148-14-11

Evolutionary classification of ammonium, nitrate, and peptide transporters in land plants
Cited by: 107
Author(s): Neil J J B von Wittgenstein, Cuong H. Le, Barbara J. Hawkins, Jürgen Ehlting
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0056195

Bridging Cancer Biology with the Clinic: Relative Expression of a GRHL2-Mediated Gene-Set Pair Predicts Breast Cancer Metastasis
Cited by: 37
Author(s): Xinan Yang, Prabhakaran Vasudevan, Vishwas Parekh, Aleks Penev, John M. Cunningham
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0242737

Identification of the enzymes responsible for m2,2G and acp3U formation on cytosolic tRNA from insects and plants
Cited by: 3
Author(s): Holly M. Funk, Ruoxia Zhao, Maggie Thomas, Sarah M. Spigelmyer, Nichlas J. Sebree, Regan O. Bales, Jamison B. Burchett, Justen B. Mamaril, Patrick A. Limbach, Michael P. Guy
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0164359

A Molecular Genetic Basis Explaining Altered Bacterial Behavior in Space
Cited by: 55
Author(s): Luis Zea, Nripesh Prasad, Shawn Levy, Louis S. Stodieck, Angela L. Jones, Shristi Shrestha, David M. Klaus
Software Mentions: 1
Published: almost 10 years ago

10.7554/eLife.12059

Quantitative neuroanatomy for connectomics in Drosophila
Cited by: 247
Author(s): Casey M Schneider-Mizell, Stephan Gerhard, Mark Longair, Tom Kazimiers, Feng Li, Maarten Zwart, Andrew Champion, Frank M. Midgley, Richard D. Fetter, Stephan Saalfeld, Albert Cardona
Software Mentions: 1
Published: over 10 years ago

10.18632/oncotarget.17399

Clinically significant sub-clonality for common drivers can be detected in 26% of <i>KRAS/EGFR</i> mutated lung adenocarcinomas
Cited by: 4
Author(s): Einav Simon, Tova Bick, Shada Sarji, Talia Shentzer, Elad Prinz, Liza Yehiam, Edmond Sabo, Ofer Ben‐Izhak, Dov Hershkovitz
Software Mentions: 1
Published: over 9 years ago

10.1007/s00335-015-9583-x

Creating reference gene annotation for the mouse C57BL6/J genome assembly
Cited by: 179
Author(s): Jonathan M. Mudge, Jennifer Harrow
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0045300

Identification of POMC Exonic Variants Associated with Substance Dependence and Body Mass Index
Cited by: 13
Author(s): Fan Wang, Joel Gelernter, Henry R. Kranzler, Huiping Zhang
Software Mentions: 1
Published: almost 14 years ago

10.18632/oncotarget.14175

Expression analysis of microRNA as prognostic biomarkers in colorectal cancer
Cited by: 46
Author(s): Jie Yang, Dongling Ma, Andrew Fesler, Haiyan Zhai, Apisri Leamniramit, Wenzhe Li, Song Wu, Jingfang Ju
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0169752

Mechanical Compression Effects on the Secretion of vWF and IL-8 by Cultured Human Vein Endothelium
Cited by: 7
Author(s): Dar Weiss, Sarit Avraham, Ruth Guttlieb, Lee Gasner, Alina Lotman, Oren M. Rotman, Shmuel Einav
Software Mentions: 1
Published: over 9 years ago

10.26508/lsa.202101028

Hierarchical dinucleotide distribution in genome along evolution and its effect on chromatin packing
Cited by: 2
Author(s): Zhicheng Cai, Yongrui He, Sirui Liu, Yue Xue, Hui Quan, Ling Zhang, Yi Qin Gao
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0014276

Molecular Evolution and Functional Divergence of the Cytochrome P450 3 (CYP3) Family in Actinopterygii (Ray-Finned Fish)
Cited by: 27
Author(s): Jun Yan, Zhonghua Cai
Software Mentions: 1
Published: over 15 years ago

10.26508/lsa.201900515

Laminin is the ECM niche for trophoblast stem cells
Cited by: 21
Author(s): Daiji Kiyozumi, Itsuko Nakano, Ryoko Sato‐Nishiuchi, Satoshi Tanaka, Kiyotoshi Sekiguchi
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0187426

A causal mediation model of ischemia reperfusion injury in the retina
Cited by: 1
Author(s): Maha Soliman, Kalina Andreeva, Olfa Nasraoui, Nigel G. F. Cooper
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0065016

N-Linked Glycosylation Supports Cross-Talk between Receptor Tyrosine Kinases and Androgen Receptor
Cited by: 40
Author(s): Harri M. Itkonen, Ian G. Mills
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0019832

The First Sequenced Carnivore Genome Shows Complex Host-Endogenous Retrovirus Relationships
Cited by: 29
Author(s): Álvaro Martínez Barrio, Marie Ekerljung, Patric Jern, Farid Benachenhou, Göran Sperber, Erik Bongcam‐Rudloff, Jonas Blomberg, Gerhard Andersson
Software Mentions: 1
Published: over 15 years ago

10.1186/1471-2148-8-46

Rapid bursts of androgen-binding protein (Abp) gene duplication occurred independently in diverse mammals
Cited by: 42
Author(s): Christina M. Laukaitis, Andreas Heger, Tyler D Blakley, Pavel Munclinger, Chris P. Ponting, Robert C. Karn
Software Mentions: 1
Published: over 18 years ago

10.1371/journal.pone.0018129

Computational Detection and Functional Analysis of Human Tissue-Specific A-to-I RNA Editing
Cited by: 17
Author(s): Tao He, Qiong Wang, Guihai Feng, Ya-Ou Hu, Li Wang, Yumin Wang
Software Mentions: 1
Published: over 15 years ago

10.1371/journal.pone.0214145

Evolution of Deeper Rooting 1-like homoeologs in wheat entails the C-terminus mutations as well as gain and loss of auxin response elements
Cited by: 33
Author(s): Almas Ashraf, Obaid Ur Rehman, Shumaila Muzammil, Jens Léon, Ali Ahmed Naz, Fatima Rasool, Ghulam Muhammad Ali, Yusuf Zafar, Muhammad Ramzan Khan
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0010435

Flavin-Dependent Monooxygenases as a Detoxification Mechanism in Insects: New Insights from the Arctiids (Lepidoptera)
Cited by: 52
Author(s): Sven Sehlmeyer, Linzhu Wang, Dorothee Langel, David G. Heckel, Hoda Mohagheghi, Georg Petschenka, Dietrich Ober
Software Mentions: 1
Published: over 16 years ago

10.1371/journal.pone.0177119

EnHERV: Enrichment analysis of specific human endogenous retrovirus patterns and their neighboring genes
Cited by: 18
Author(s): Pumipat Tongyoo, Yingyos Avihingsanon, Santhitham Prom-On, Apiwat Mutirangura, Wuttichai Mhuantong, Nattiya Hirankarn
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0148710

A Glance at Recombination Hotspots in the Domestic Cat
Cited by: 0
Author(s): Hasan Alhaddad, Chi Zhang, Bruce Rannala, Leslie A. Lyons
Software Mentions: 1
Published: over 10 years ago

10.18632/oncotarget.17826

C1orf64 is a novel androgen receptor target gene and coregulator that interacts with 14-3-3 protein in breast cancer
Cited by: 11
Author(s): Ali Naderi
Software Mentions: 1
Published: over 9 years ago

10.26508/lsa.202000666

BACH family members regulate angiogenesis and lymphangiogenesis by modulating VEGFC expression
Cited by: 19
Author(s): Batya Cohen, Hanoch Tempelhof, Tal Raz, Roni Oren, Julian Nicenboim, Filip Bochner, Ron Even, Adam Jelinski, Raya Eilam, Shifra Ben‐Dor, Yoseph Adaddi, Ofra Golani, Shlomi Lazar, Karina Yaniv, Michal Neeman
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0067762

Six1 Regulates MyoD Expression in Adult Muscle Progenitor Cells
Cited by: 36
Author(s): Yubing Liu, Imane Chakroun, Dongfang Yang, Ellias Horner, Junquan Liang, Arif Aziz, Alphonse Chu, Yves De Repentigny, F. Jeffrey Dilworth, Rashmi Kothary, Alexandre Blais
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0071231

Two Variants of the C-Reactive Protein Gene Are Associated with Risk of Pre-Eclampsia in an American Indian Population
Cited by: 21
Author(s): Lyle G. Best, Richa Saxena, Cindy M. Anderson, Michael R. Barnes, Hákon Hákonarson, Gilbert Falcon, Candelaria Martín, Berta Almoguera Castillo, Ananth Karumanchi, Kylie Keplin, Nichole Pearson, Felicia Lamb, Shellee Bercier, Brendan J. Keating
Software Mentions: 1
Published: about 13 years ago

10.3390/life11080861

Analysis of Homozygous-by-Descent (HBD) Segments for Purebred and Crossbred Pigs in Russia
Cited by: 4
Author(s): Siroj Bakoev, Anatoly Kolosov, Faridun Bakoev, Olga Kostyunina, Nekruz Bakoev, Т. С. Романец, Olga Koshkina, Lyubov Getmantseva
Software Mentions: 1
Published: about 5 years ago

10.3390/life11060510

Genomic Regions and Candidate Genes Linked to Capped Hock in Pig
Cited by: 3
Author(s): Lyubov Getmantseva, Maria Kolosova, Faridun Bakoev, Anna Zimina, Siroj Bakoev
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0030049

Differential Expression Profile and Genetic Variants of MicroRNAs Sequences in Breast Cancer Patients
Cited by: 73
Author(s): Ali A. Alshatwi, Gowhar Shafi, Tarique N. Hasan, Naveed Ahmed Syed, Amal A. Al-Hazzani, Mohammed A. Alsaif, Abdulaziz Alsaif
Software Mentions: 1
Published: over 14 years ago

10.1186/s12862-018-1147-8

Tracing the evolution of the heterotrimeric G protein α subunit in Metazoa
Cited by: 16
Author(s): Alyssa D. Lokits, Henrike Indrischek, Jens Meiler, Heidi E. Hamm, Peter F. Stadler
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0116318

Generation and Characterization of Antibodies against Asian Elephant (Elephas maximus) IgG, IgM, and IgA
Cited by: 17
Author(s): Alan F. Humphreys, Jie Tan, RongSheng Peng, Susan M. Benton, Xiang Qin, Kim C. Worley, Rose Mikulski, Dar‐Chone Chow, Timothy Palzkill, Paul D. Ling
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0163135

Enhancement of the Knowledge on Fungal Communities in Directly Brined Aloreña de Málaga Green Olive Fermentations by Metabarcoding Analysis
Cited by: 33
Author(s): Francisco Noé Arroyo‐López, M.A. Ruiz-Bellido, Verónica Romero‐Gil, Miguel Montes-Borrego, Blanca B. Landa
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.pone.0150974

Global Metabolic Reconstruction and Metabolic Gene Evolution in the Cattle Genome
Cited by: 5
Author(s): Woonsu Kim, Hyesun Park, Seongwon Seo
Software Mentions: 1
Published: over 10 years ago

10.1038/s41375-018-0311-x

Global long terminal repeat activation participates in establishing the unique gene expression programme of classical Hodgkin lymphoma
Cited by: 16
Author(s): Benjamin Edginton-White, Pierre Cauchy, Salam A. Assi, Sven Hartmann, Arthur D. Riggs, Stephan Mathas, Peter N. Cockerill, Constanze Bonifer
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0092203

Sequencing and Characterisation of Rearrangements in Three S. pastorianus Strains Reveals the Presence of Chimeric Genes and Gives Evidence of Breakpoint Reuse
Cited by: 64
Author(s): Sarah Hewitt, Ian J. Donaldson, Simon C. Lovell, Daniela Delneri
Software Mentions: 1
Published: over 12 years ago

10.1186/1471-2148-12-62

Genomic characterization of the European sea bass Dicentrarchus labrax reveals the presence of a novel uncoupling protein (UCP) gene family member in the teleost fish lineage
Cited by: 11
Author(s): Mbaye Tine, Heiner Kuhl, Martin Jastroch, Richard Reinhardt
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0080326

Performance of Polygenic Scores for Predicting Phobic Anxiety
Cited by: 25
Author(s): Stefan Walter, M. Maria Glymour, Karestan C. Koenen, Liming Liang, Eric J. Tchetgen Tchetgen, Marilyn C. Cornelis, Shun Chiao Chang, Eric B. Rimm, Ichiro Kawachi, Laura D. Kubzansky
Software Mentions: 1
Published: almost 13 years ago

10.1371/journal.pone.0126475

HSA21 Single-Minded 2 (Sim2) Binding Sites Co-Localize with Super-Enhancers and Pioneer Transcription Factors in Pluripotent Mouse ES Cells
Cited by: 8
Author(s): Audrey Letourneau, Gilda Cobellis, Alexandre Fort, Federico Santoni, Marco Garieri, Emilie Falconnet, Pascale Ribaux, Anne Vannier, Michel Guipponi, Piero Carninci, Christelle Borel, Stylianos E. Antonarakis
Software Mentions: 1
Published: over 11 years ago

10.1186/1471-2148-9-217

BigFoot: Bayesian alignment and phylogenetic footprinting with MCMC
Cited by: 26
Author(s): Rahul Satija, Adam M. Novak, István Miklós, Rune B. Lyngsø, Jotun Hein
Software Mentions: 1
Published: over 17 years ago

10.1371/journal.pone.0042424

Functional and Molecular Characterization of the Role of CTCF in Human Embryonic Stem Cell Biology
Cited by: 21
Author(s): Sri Kripa Balakrishnan, Michael Witcher, Travis Berggren, Beverly M. Emerson
Software Mentions: 1
Published: about 14 years ago

10.1186/s12861-016-0119-8

Expression and knockdown of zebrafish folliculin suggests requirement for embryonic brain morphogenesis
Cited by: 3
Author(s): Emma J. Kenyon, Monique Luijten, Harmeet Gill, Nan Li, Matthew Rawlings, James C. Bull, Yavor Hadzhiev, M.A.M. van Steensel, Eamonn R. Maher, Ferenc Müller
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0185286

The riddle of mitochondrial alkaline/neutral invertases: A novel Arabidopsis isoform mainly present in reproductive tissues and involved in root ROS production
Cited by: 11
Author(s): Marina Battaglia, María Victoria Martin, Leandra Lechner, Giselle Martínez-Noël, Graciela L. Salerno
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0184455

Incidence of pancreatic cancer is dramatically increased by a high fat, high calorie diet in KrasG12D mice
Cited by: 94
Author(s): Hui-Hua Chang, Aune Moro, Kazuki Takakura, Hsin-Yuan Su, Allen Mo, Masayoshi Nakanishi, Richard T. Waldron, Samuel W. French, David W. Dawson, Oscar J. Hines, Gang Li, Vay Liang W. Go, James Sinnett‐Smith, Stephen J. Pandol, Aurelia Lugea, Anna S. Gukovskaya, Michael O. Duff, Daniel W. Rosenberg, Enrique Rozengurt, Guido Eibl
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0059994

Dissecting the Dynamics of HIV-1 Protein Sequence Diversity
Cited by: 14
Author(s): Yongli Hu, Paul Thiam Joo Tan, Tin Wee Tan, J. Thomas August, Mohammad Asif Khan
Software Mentions: 1
Published: over 13 years ago

10.18632/oncotarget.17740

TUBB3 overexpression has a negligible effect on the sensitivity to taxol in cultured cell lines
Cited by: 17
Author(s): Mihoko A. Tame, Anna G. Manjón, Daria Belokhvostova, Jonne A. Raaijmakers, René H. Medema
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0066799

Role of Helicase-Like Transcription Factor (Hltf) in the G2/M Transition and Apoptosis in Brain
Cited by: 24
Author(s): Rebecca A. Helmer, Oded Foreman, Janet Dertien, Marlyn Panchoo, Suhani M. Bhakta, Beverly S. Chilton
Software Mentions: 1
Published: about 13 years ago

10.1186/1471-213X-8-46

Axon-bearing and axon-less horizontal cell subtypes are generated consecutively during chick retinal development from progenitors that are sensitive to follistatin
Cited by: 35
Author(s): Per-Henrík Edqvist, Madelen Lek, Henrik Boije, Sarah M Lindbäck, Finn Hallböök
Software Mentions: 1
Published: over 18 years ago

10.1186/1471-213X-9-11

Trichostatin A treatment of cloned mouse embryos improves constitutive heterochromatin remodeling as well as developmental potential to term
Cited by: 79
Author(s): Walid E. Maalouf, Zichuan Liu, Vincent Brochard, Jean‐Paul Renard, Pascale Debey, Nathalie Beaujean, Daniele Zink
Software Mentions: 1
Published: over 17 years ago

10.1371/journal.pone.0140436

Two Independent Mutations in ADAMTS17 Are Associated with Primary Open Angle Glaucoma in the Basset Hound and Basset Fauve de Bretagne Breeds of Dog
Cited by: 30
Author(s): James A. C. Oliver, Oliver P. Forman, Louise Pettitt, Cathryn S. Mellersh
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0121672

Characterization of the Avian Trojan Gene Family Reveals Contrasting Evolutionary Constraints
Cited by: 3
Author(s): Petar Petrov, Riikka Syrjänen, Jacqueline Smith, Maria Weronika Gutowska, Toshihiro Uchida, Olli Vainio, David W. Burt
Software Mentions: 1
Published: over 11 years ago

10.1186/s42826-020-00065-x

Tamoxifen-inducible cardiac-specific Cre transgenic mouse using VIPR2 intron
Cited by: 2
Author(s): Hyun Jung Chin, So-Young Lee, Daekee Lee
Software Mentions: 1
Published: almost 6 years ago

10.1186/s40575-016-0037-x

A large deletion in RPGR causes XLPRA in Weimaraner dogs
Cited by: 17
Author(s): Regina Kropatsch, Denis A. Akkad, Matthias Frank, Carsten U Rosenhagen, Janine Altmüller, Peter Nürnberg, Jórg T. Epplen, Gabriele Dekomien
Software Mentions: 1
Published: about 10 years ago

10.1186/1471-213X-13-18

Expression of phosphatase of regenerating liver family genes during embryogenesis: an evolutionary developmental analysis among Drosophila, amphioxus, and zebrafish
Cited by: 22
Author(s): Ming‐Der Lin, Hsun-Tzu Lee, Szu-Chieh Wang, Han-Ru Li, Hsin-Lun Hsien, Kai-Wen Cheng, Yu-Di Chang, Min-Lang Huang, Jr-Kai Yu, Yau‐Hung Chen
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0019091

The Genetic Effect of Copy Number Variations on the Risk of Type 2 Diabetes in a Korean Population
Cited by: 20
Author(s): Joon Seol Bae, Hyun Sub Cheong, Ji Eun Kim, Byung Lae Park, Jeonghyun Kim, Tae Joon Park, Jason Yongha Kim, Charisse Flerida A. Pasaje, Jin Sol Lee, Yun-Ju Park, Miey Park, Chan Park, Insong Koh, Yeun‐Jun Chung, Jong‐Young Lee, Hyoung Doo Shin
Software Mentions: 1
Published: over 15 years ago

10.1186/2049-3002-1-14

Expression and phosphorylation of the AS160_v2 splice variant supports GLUT4 activation and the Warburg effect in multiple myeloma
Cited by: 18
Author(s): Javelin C. Cheng, Samuel K. McBrayer, Cristian Coarfa, Sevim Dalva-Aydemir, Preethi H. Gunaratne, John D. Carpten, Jonathan J. Keats, Steven T. Rosen, Mala Shanmugam
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0008978

Expression of Cartilage Developmental Genes in Hoxc8- and Hoxd4-Transgenic Mice
Cited by: 27
Author(s): Claudia Krüger, Claudia Kappen
Software Mentions: 1
Published: over 16 years ago

10.1371/journal.pone.0150639

Initiation of cyp26a1 Expression in the Zebrafish Anterior Neural Plate by a Novel Cis-Acting Element
Cited by: 1
Author(s): Chunhong Chen, Aline Stedman, Emmanuelle Havis, Isabelle Anselme, Daria Onichtchouk, François Giudicelli, Sylvie Schneider‐Maunoury
Software Mentions: 1
Published: over 10 years ago

10.1186/s12935-020-01597-x

Novel sequential treatment with palbociclib enhances the effect of cisplatin in RB-proficient triple-negative breast cancer
Cited by: 11
Author(s): Ya‐Jing Huang, Hao Wu, Xingrui Li
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0139656

Prioritizing Clinically Relevant Copy Number Variation from Genetic Interactions and Gene Function Data
Cited by: 8
Author(s): Justin Foong, Marta Gı̂rdea, James Stavropoulos, Michael Brudno
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0094306

The Association of Myosin IB with Actin Waves in Dictyostelium Requires Both the Plasma Membrane-Binding Site and Actin-Binding Region in the Myosin Tail
Cited by: 27
Author(s): Hanna Brzeska, Kevin J. Pridham, Godefroy Chery, Margaret A. Titus, Edward D. Korn
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0238467

Evaluation of molecular inversion probe versus TruSeq® custom methods for targeted next-generation sequencing
Cited by: 16
Author(s): Rowida Almomani, Margherita Marchi, Maurice Sopacua, Patrick Lindsey, Erika Salvi, Bart de Koning, Silvia Santoro, Stefania Magri, Hubert J.M. Smeets, Filippo Martinelli Boneschi, Rayaz A. Malik, Dan Ziegler, Janneke G. J. Hoeijmakers, Gidon J. Bönhof, Sulayman D. Dib‐Hajj, Stephen G. Waxman, Ingemar S.J. Merkies, Giuseppe Lauria, Catharina G. Faber, Monique M. Gerrits
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0056379

Identity-by-Descent Mapping to Detect Rare Variants Conferring Susceptibility to Multiple Sclerosis
Cited by: 17
Author(s): Rui Lin, Jac Charlesworth, Jim Stankovich, Victoria M. Perreau, Matthew A. Brown, Bruce Taylor
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0136866

A Gβ protein and the TupA Co-Regulator Bind to Protein Kinase A Tpk2 to Act as Antagonistic Molecular Switches of Fungal Morphological Changes
Cited by: 1
Author(s): Thamarai K. Janganan, Gongyou Chen, Daliang Chen, João F. Menino, Fernando Rodrigues, M. Inês Borges-Walmsley, Adrian R. Walmsley
Software Mentions: 1
Published: about 11 years ago

10.1186/s12935-019-0816-z

OTU deubiquitinase 4 is silenced and radiosensitizes non-small cell lung cancer cells via inhibiting DNA repair
Cited by: 17
Author(s): Zhiqiang Wu, Minghan Qiu, Yu Guo, Jian Zhao, Zhuang Liu, Hui Wang, Maobin Meng, Zhiyong Yuan, Zeyun Mi
Software Mentions: 1
Published: over 7 years ago

10.1186/1471-213X-11-63

Conserved and non-conserved enhancers direct tissue specific transcription in ancient germ layer specific developmental control genes
Cited by: 25
Author(s): Satadal Chatterjee, Guillaume Bourque, Thomas Lufkin
Software Mentions: 1
Published: almost 15 years ago

10.1371/journal.pone.0113829

A Mutation in cnot8, Component of the Ccr4-Not Complex Regulating Transcript Stability, Affects Expression Levels of Developmental Regulators and Reveals a Role of Fgf3 in Development of Caudal Hypothalamic Dopaminergic Neurons
Cited by: 14
Author(s): Peter J. Koch, Heiko Löhr, Wolfgang Driever
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0112984

Function-Triggering Antibodies to the Adhesion Molecule L1 Enhance Recovery after Injury of the Adult Mouse Femoral Nerve
Cited by: 10
Author(s): Daria Guseva, Gabriele Loers, Melitta Schachner
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0032958

The Role of Inflammatory Pathway Genetic Variation on Maternal Metabolic Phenotypes during Pregnancy
Cited by: 20
Author(s): Margrit Urbanek, M. Geoffrey Hayes, Hoon Lee, Rachel M. Freathy, Lynn P. Lowe, Christine M. Ackerman, Nadereh Jafari, Alan R. Dyer, Nancy J. Cox, David B. Dunger, Andrew T. Hattersley, Boyd E. Metzger, William L. Lowe
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0079922

DNA Sequences at a Glance
Cited by: 13
Author(s): Armando J. Pinho, Sara P. Garcia, Diogo Pratas, Paulo J. S. G. Ferreira
Software Mentions: 1
Published: almost 13 years ago

10.1186/s12906-021-03310-5

Echinacea purpurea (L.) Moench treatment of monocytes promotes tonic interferon signaling, increased innate immunity gene expression and DNA repeat hypermethylated silencing of endogenous retroviral sequences
Cited by: 5
Author(s): Ken Declerck, Claudina Pérez Novo, Lisa Grielens, Guy Van Camp, Andy Suter, Wim Vanden Berghe
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0002896

Evolutionary Origins and Functions of the Carotenoid Biosynthetic Pathway in Marine Diatoms
Cited by: 125
Author(s): Sacha Coesel, Miroslav Oborník, João Varela, Angela Falciatore, Chris Bowler
Software Mentions: 1
Published: about 18 years ago

10.1186/s12906-018-2396-1

Topical anti-inflammatory and anti-oxidative effects of porcine placenta extracts on 2,4-dinitrochlorobenzene-induced contact dermatitis
Cited by: 15
Author(s): Jae-Hyeok Heo, Yoonki Heo, Hee Jung Lee, Min-Jee Kim, Ha Youn Shin
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0077700

Combining Different mRNA Capture Methods to Analyze the Transcriptome: Analysis of the Xenopus laevis Transcriptome
Cited by: 24
Author(s): Michael D. Blower, Ashwini Jambhekar, Dianne S. Schwarz, James A. Toombs
Software Mentions: 1
Published: almost 13 years ago

10.1371/journal.pone.0061920

Ultra-Rare Mutation in Long-Range Enhancer Predisposes to Thyroid Carcinoma with High Penetrance
Cited by: 32
Author(s): Hao He, Wei Li, Dayong Wu, Rebecca Nagy, Sandya Liyanarachchi, Keiko Akagi, Jarosław Jendrzejewski, Hong Jiao, Kevin W. Hoag, Bernard Wen, Mukund Srinivas, Gavisha Waidyaratne, Rui Wang, Anna Wójcicka, Ilene Lattimer, Elżbieta Stachlewska, Małgorzata Czetwertyńska, Joanna Długosińska, Wojciech Gierlikowski, Rafał Płoski, Marek Krawczyk, Krystian Jażdżewski, Juha Kere, David E. Symer, Victor X. Jin, Qianben Wang, Albert de la Chapelle
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0212266

Genomic structure of a crossbred Landrace pig population
Cited by: 11
Author(s): Letícia Borges Joaquim, T.C.S. Chud, Jorge Augusto Petroli Marchesi, Rodrigo Pelicioni Savegnago, Marcos Eli Buzanskas, Ricardo Zanella, Mauricio Egídio Cantão, J. O. Peixoto, Mônica Corrêa Ledur, Renato Irgang, Danísio Prado Munari
Software Mentions: 1
Published: over 7 years ago

10.1186/1471-2407-9-198

A novel method, digital genome scanning detects KRAS gene amplification in gastric cancers: involvement of overexpressed wild-type KRAS in downstream signaling and cancer cell growth
Cited by: 52
Author(s): Hiroaki Mitsuya, Minoru Toyota, Fugaku Aoki, Hirofumi Akashi, Reo Maruyama, Yasushi Sasaki, Hiromu Suzuki, Masashi Idogawa, Lisa Kashima, Kazuyoshi Yanagihara, Masahiro Fujita, Masao Hosokawa, Masanobu Kusano, Sorin V. Sabau, Haruyuki Tatsumi, Kohzoh Imai, Yasuhisa Shinomura, Takashi Tokino
Software Mentions: 1
Published: about 17 years ago

10.1186/1471-2407-10-40

Orphan receptor GPR110, an oncogene overexpressed in lung and prostate cancer
Cited by: 63
Author(s): Amy Lum, Bruce B. Wang, Gabriele Beck-Engeser, Lauri Li, Namitha Channa, Matthias Wabl
Software Mentions: 1
Published: over 16 years ago

10.1371/journal.pone.0026477

Golgi Apparatus-Localized Synaptotagmin 2 Is Required for Unconventional Secretion in Arabidopsis
Cited by: 50
Author(s): Haiyan Zhang, Liang Zhang, Bin Gao, Fan Hai, Jingbo Jin, Miguel A. Botella, Liwen Jiang, Jinxing Lin
Software Mentions: 1
Published: almost 15 years ago

10.1371/journal.pone.0103967

Visualizing Late Insect Embryogenesis: Extraembryonic and Mesodermal Enhancer Trap Expression in the Beetle Tribolium castaneum
Cited by: 16
Author(s): Stefan Koelzer, Yvonne Kölsch, Kristen A. Panfilio
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0053767

t(8;9)(p22;p24)/PCM1-JAK2 Activates SOCS2 and SOCS3 via STAT5
Cited by: 40
Author(s): Stefan Ehrentraut, Stefan Nagel, Michaela Scherr, Björn Schneider, Hilmar Quentmeier, Robert Geffers, Maren Kaufmann, Corinna Meyer, Monika Prochorec‐Sobieszek, Rhett P. Ketterling, Ryan A. Knudson, Andrew L. Feldman, Marshall E. Kadin, Hans G. Drexler, Roderick A.F. MacLeod
Software Mentions: 1
Published: over 13 years ago

10.1186/s12935-019-0833-y

Identification of ESM1 overexpressed in head and neck squamous cell carcinoma
Cited by: 17
Author(s): Hui Xu, Xiaohong Chen, Zhigang Huang
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0024480

Late Replicating Domains Are Highly Recombining in Females but Have Low Male Recombination Rates: Implications for Isochore Evolution
Cited by: 5
Author(s): Catherine Pink, Laurence D. Hurst
Software Mentions: 1
Published: almost 15 years ago

10.1371/journal.pone.0000702

Mammalian Comparative Sequence Analysis of the Agrp Locus
Cited by: 5
Author(s): Christopher B. Kaelin, Gregory M. Cooper, Arend Sidow, Gregory S. Barsh
Software Mentions: 1
Published: about 19 years ago

10.7554/eLife.29510

Genomic regions controlling shape variation in the first upper molar of the house mouse
Cited by: 6
Author(s): Luisa F. Pallares, Ronan Ledevin, Sophie Pantalacci, Leslie M. Turner, Eiríkur Steingrímsson, Sabrina Renaud
Software Mentions: 1
Published: almost 9 years ago

10.1186/s12885-021-08332-3

Prognostic and clinicopathological insights of phosphodiesterase 9A gene as novel biomarker in human colorectal cancer
Cited by: 10
Author(s): Tasmina Ferdous Susmi, Atikur Rahman, Md. Moshiur Rahman Khan, Farzana Yasmin, Md. Shariful Islam, Omaima Nasif, Sulaiman Ali Alharbi, Gaber El‐Saber Batiha, Mohammad Uzzal Hossain
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0011595

Telomeric NAP1L4 and OSBPL5 of the KCNQ1 Cluster, and the DECORIN Gene Are Not Imprinted in Human Trophoblast Stem Cells
Cited by: 13
Author(s): Jennifer M. Frost, Ramya Udayashankar, H. D. M. Moore, Gudrun E. Moore
Software Mentions: 1
Published: about 16 years ago

10.1186/s12885-018-5050-x

TRPM7 overexpression enhances the cancer stem cell-like and metastatic phenotypes of lung cancer through modulation of the Hsp90α/uPA/MMP2 signaling pathway
Cited by: 34
Author(s): Kai Li, Shaohua Xu, Zhao Chun-hua, Qingxin Zeng, Zhijun Li, Zhoumiao Chen
Software Mentions: 1
Published: almost 8 years ago

10.1007/s00223-018-0406-4

Pharmacological Inhibition of the Skeletal IKKβ Reduces Breast Cancer-Induced Osteolysis
Cited by: 8
Author(s): Silvia Marino, Ryan T. Bishop, Patrick Mollat, Aymen I. Idris
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0015246

Microarray-Based Maps of Copy-Number Variant Regions in European and Sub-Saharan Populations
Cited by: 22
Author(s): Christian Vogler, Leo Gschwind, Benno Röthlisberger, Andreas Huber, Isabel Filges, Peter Miny, Bianca Auschra, Attila Steták, Philippe Demougin, Vanja Vukojević, Iris‐Tatjana Kolassa, Thomas Elbert, Dominique J.‐F. de Quervain, Andreas Papassotiropoulos
Software Mentions: 1
Published: over 15 years ago

10.1371/journal.pone.0036337

Alternative Splicing of Spg7, a Gene Involved in Hereditary Spastic Paraplegia, Encodes a Variant of Paraplegin Targeted to the Endoplasmic Reticulum
Cited by: 8
Author(s): Giuseppe Mancuso, Esther Barth, Pietro Crivello, Elena I. Rugarli
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0152834

Association of MicroRNA-196a2 Variant with Response to Short-Acting β2-Agonist in COPD: An Egyptian Pilot Study
Cited by: 31
Author(s): Manal S. Fawzy, Mohammad Hussein, Eman Z. Abdelaziz, Hussain A. Yamany, Hussein Ismail, Eman A. Toraih
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0058931

A New Genetic Linkage Map of the Zygomycete Fungus Phycomyces blakesleeanus
Cited by: 22
Author(s): Suman Chaudhary, Silvia Polaino, Viplendra P. S. Shakya, Alexander Idnurm
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0005352

Conservation and Variability of West Nile Virus Proteins
Cited by: 24
Author(s): Qi Ying Koo, Mohammad Asif Khan, Keunok Jung, Shweta Ramdas, Olivo Miotto, Tin Wee Tan, Vladimir Brusic, Jérôme Salmon, J. Thomas August
Software Mentions: 1
Published: over 17 years ago

10.1371/journal.pone.0077492

Integrated Analysis of Dysregulated lncRNA Expression in Fetal Cardiac Tissues with Ventricular Septal Defect
Cited by: 35
Author(s): Guixian Song, Yahui Shen, Jingai Zhu, Hailang Liu, Ming Liu, Yuechun Shen, Shasha Zhu, Xiangqing Kong, Zhangbin Yu, Lei Qian
Software Mentions: 1
Published: almost 13 years ago

10.1371/journal.pone.0038907

Characterization of Novel Paternal ncRNAs at the Plagl1 Locus, Including Hymai, Predicted to Interact with Regulators of Active Chromatin
Cited by: 21
Author(s): Isabel Iglesias-Platas, Alex Martín‐Trujillo, Davide Cirillo, Franck Court, Amy Guillaumet-Adkins, Cristina Camprubí, Déborah Bourc’his, Kenichiro Hata, Robert Feil, Gian Gaetano Tartaglia, Philippe Arnaud, David Gabriel Monk
Software Mentions: 1
Published: about 14 years ago

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