Projects: pypi: arboreto
https://packages.ecosyste.ms/registries/pypi.org/packages/arboreto
Scalable gene regulatory network inference using tree-based ensemble regressors
4 versions
Latest release: over 5 years ago
2 dependent packages
1,151 downloads last month
Enhanced Analysis
Repository Activity:
Repository Owner:
aertslab (organization)
Academic
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
-
+20
Academic repository owner
Repository owned by academic institution -
+15
Institutional repository owner
Repository owned by research institution -
+18
Science terms in README
9 scientific terms found in README -
+20
DOI references
2 DOI references found in README
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem
Very Likely Science (100)
Papers Mentioning arboreto 2
10.1016/j.celrep.2021.109698
Transitions in lineage specification and gene regulatory networks in hematopoietic stem/progenitor cells over human developmentCited by: 33
Author(s): Anindita Roy, Guanlin Wang, Deena Iskander, Sorcha O’Byrne, Natalina E. Elliott, Jennifer O’Sullivan, Gemma Buck, Elisabeth F. Heuston, Wei Wen, Alba Rodríguez-Meira, Peng Hua, Anastasios Karadimitris, Adam J. Mead, David M. Bodine, Irene Roberts, Bethan Psaila, Supat Thongjuea
Software Mentions: 9
Published: almost 5 years ago
10.1186/s13073-021-00930-x
DeepProg: an ensemble of deep-learning and machine-learning models for prognosis prediction using multi-omics dataCited by: 72
Author(s): Olivier Poirion, Jiangbin Zheng, Kumardeep Chaudhary, Sijia Huang, Lana X. Garmire
Software Mentions: 9
Published: about 5 years ago