pypi: analysis | Projects | Ecosyste.ms: Papers

10.18632/oncotarget.20748

Plasma-derived extracellular vesicle proteins as a source of biomarkers for lung adenocarcinoma
Cited by: 59
Author(s): Jody Vykoukal, Nan Sun, Clemente Aguilar-Bonavides, Hiroyuki Katayama, Ichidai Tanaka, Johannes F. Fahrmann, Michela Capello, Junya Fujimoto, Mitzi Aguilar, Ignacio I. Wistuba, Ayumu Taguchi, Edwin J. Ostrin, Samir Hanash
Software Mentions: 1
Published: about 8 years ago

10.1186/s12913-018-3742-1

Cross-sectoral integration in youth-focused health and social services in Canada: a social network analysis
Cited by: 8
Author(s): Rachel McGihon, Lisa D. Hawke, Gloria Chaim, Joanna Henderson
Software Mentions: 1
Published: almost 7 years ago

10.1002/advs.201900782

Genome‐Wide CRISPR‐Cas9 Screening Identifies NF‐κB/E2F6 Responsible for EGFRvIII‐Associated Temozolomide Resistance in Glioblastoma
Cited by: 43
Author(s): Kai Huang, Xing Liu, Yansheng Li, Qixue Wang, Junhu Zhou, Yunfei Wang, Feng Dong, Chao Yang, Zimin Sun, Chuan Fang, Chaoyong Liu, Yanli Tan, Xudong Wu, Tao Jiang, Chunsheng Kang
Software Mentions: 1
Published: over 6 years ago

10.1186/s12877-021-02261-3

Clinical features and outcomes of COVID-19 in older adults: a systematic review and meta-analysis
Cited by: 67
Author(s): Sunny Singhal, Pramod Kumar, Sumitabh Singh, Srishti Saha, Aparajit Ballav Dey
Software Mentions: 1
Published: over 4 years ago

10.1128/mSystems.00170-17

Genome-Scale, Constraint-Based Modeling of Nitrogen Oxide Fluxes during Coculture of Nitrosomonas europaea and Nitrobacter winogradskyi
Cited by: 24
Author(s): Brett L. Mellbye, Andrew T. Giguere, Ganti S. Murthy, Peter J. Bottomley, Luis A. Sayavedra-Soto, Frank Chaplen
Software Mentions: 1
Published: over 7 years ago

10.15171/apb.2019.011

In Silico Exploration of Aryl Halides Analogues as CheckpointKinase 1 Inhibitors by Using 3D QSAR, Molecular Docking Study,and ADMET Screening
Cited by: 15
Author(s): Adib Ghaleb, Adnane Aouidate, Mohammed Bouachrine, Tahar Lakhlifi, Abdelouahid Sbai
Software Mentions: 1
Published: over 6 years ago

10.1128/mSystems.00170-18

Minor Isozymes Tailor Yeast Metabolism to Carbon Availability
Cited by: 13
Author(s): Patrick H. Bradley, Patrick A. Gibney, David Botstein, Olga G. Troyanskaya, Joshua D. Rabinowitz
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2164-10-90

Expression profiling and Ingenuity biological function analyses of interleukin-6- versus nerve growth factor-stimulated PC12 cells
Cited by: 19
Author(s): Dieter Kunz, Gaby Walker, Marc Bedoucha, Ulrich Certa, Pia März-Weiss, Beatrice Dimitriades-Schmutz, U. Otten
Software Mentions: 1
Published: almost 17 years ago

10.1128/mSystems.00755-20

Diagnosing and Predicting Mixed-Culture Fermentations with Unicellular and Guild-Based Metabolic Models
Cited by: 19
Author(s): Matthew Scarborough, Joshua J. Hamilton, Elizabeth A. Erb, Timothy J. Donohue, Daniel R. Noguera
Software Mentions: 1
Published: about 5 years ago

10.1186/s40478-021-01245-z

Importance of extracellular vesicle secretion at the blood–cerebrospinal fluid interface in the pathogenesis of Alzheimer’s disease
Cited by: 24
Author(s): Charysse Vandendriessche, Sriram Balusu, Caroline Van Cauwenberghe, Marjana Brkić, Marie J. Pauwels, Nele Plehiers, Arnout Bruggeman, P Dujardin, Griet Van Imschoot, Elien Van Wonterghem, An Hendrix, Femke Baeke, Riet De Rycke, Kris Gevaert, Roosmarijn E. Vandenbroucke
Software Mentions: 1
Published: about 4 years ago

10.1093/hmg/ddt490

The role of the mitochondrial ribosome in human disease: searching for mutations in 12S mitochondrial rRNA with high disruptive potential
Cited by: 32
Author(s): Paul M. Smith, Joanna L. Elson, Laura C. Greaves, Saskia B. Wortmann, Richard J. Rodenburg, Robert N. Lightowlers, Zofia M.A. Chrzanowska-Lightowlers, Robert W. Taylor, Antón Vila-Sanjurjo
Software Mentions: 1
Published: about 12 years ago

10.18632/oncotarget.22604

The implication from RAS/RAF/ERK signaling pathway increased activation in epirubicin treated triple negative breast cancer
Cited by: 23
Author(s): Jianbo Huang, Qingqing Luo, Yun Xiao, Hongyuan Li, Lingna Kong, Guosheng Ren
Software Mentions: 1
Published: almost 8 years ago

10.1038/ismej.2016.45

Challenges in microbial ecology: building predictive understanding of community function and dynamics
Cited by: 537
Author(s): Stefanie Widder, Rosalind J. Allen, Thomas Pfeiffer, Thomas P. Curtis, Carsten Wiuf, William T. Sloan, Otto X. Cordero, Sam P. Brown, Babak Momeni, Wenying Shou, Helen Kettle, Harry J. Flint, Andreas F. Haas, Béatrice Laroche, Jan‐Ulrich Kreft, Paul B. Rainey, Shiri Freilich, Stefan Schuster, Kim Milferstedt, Jan Roelof van der Meer, Tobias Groβkopf, Jef Huisman, Andrew Free, Cristian Picioreanu, Christopher Quince, Isaac Klapper, Simon Labarthe, Barth F. Smets, Harris H. Wang, Orkun S. Soyer
Software Mentions: 1
Published: over 9 years ago

10.1186/1471-2164-14-324

Interfacing cellular networks of S. cerevisiae and E. coli: Connecting dynamic and genetic information
Cited by: 25
Author(s): Ricardo de Matos Simoes, Matthias Dehmer, Frank Emmert‐Streib
Software Mentions: 1
Published: over 12 years ago

10.1155/2013/952570

Magnetic Resonance Imaging versus Electrophysiologic Tests in Clinical Diagnosis of Lower Extremity Radicular Pain
Cited by: 5
Author(s): Ebrahim Ghayem Hasankhani, Farzad Omidi-Kashani
Software Mentions: 1
Published: almost 13 years ago

10.5402/2013/627303

Alzheimer’s Disease Detection in Brain Magnetic Resonance Images Using Multiscale Fractal Analysis
Cited by: 21
Author(s): Salim Lahmiri, Mounir Boukadoum
Software Mentions: 1
Published: about 12 years ago

10.1186/s12864-019-5558-8

Systems based analysis of human embryos and gene networks involved in cell lineage allocation
Cited by: 13
Author(s): Hannah Smith, Adam Stevens, Ben M. Minogue, Sharon Sneddon, Lisa Shaw, Liam Wood, Tope Adeniyi, Hui Xiao, Píetro Lió, Susan J. Kimber, Daniel R. Brison
Software Mentions: 1
Published: over 6 years ago

10.1186/s12864-018-4656-3

A manually annotated Actinidia chinensis var. chinensis (kiwifruit) genome highlights the challenges associated with draft genomes and gene prediction in plants
Cited by: 130
Author(s): Sarah M. Pilkington, Ross N. Crowhurst, Elena Hilario, Simona Nardozza, Lena G. Fraser, Yongyan Peng, Kularajathevan Gunaseelan, Robert M. Simpson, Jibran Tahir, Simon C. Deroles, Kerry Templeton, Zhiwei Luo, Marcus Davy, Canhong Cheng, M.A. McNeilage, Davide Scaglione, Yifei Liu, Qiong Zhang, Paul M. Datson, Nihal De Silva, Susan E. Gardiner, H. Bassett, David Chagné, John McCallum, Helge Dzierzon, Cecilia Deng, Yen-Yi Wang, Lorna Barron, K.I. Manako, Judith Bowen, Toshi Foster, Zoë A. Erridge, Heather R. Tiffin, Chethi N. Waite, Kelvin J.A. Davies, Ella P. Grierson, William A. Laing, Rebecca Kirk, Xiuyin Chen, Marion Wood, Mirco Montefiori, David A. Brummell, Kathy E. Schwinn, Andrew Catanach, Christina Fullerton, Dawei Li, Sathiyamoorthy Meiyalaghan, Niels J. Nieuwenhuizen, Nicola Read, Roneel Prakash, D. J. Hunter, Huaibi Zhang, Marian J. McKenzie, Mareike Knäbel, Alastair Harris, Andrew C. Allan, Andrew P. Gleave, Angela Chen, Bart Janssen, Blue Plunkett, Charles Ampomah‐Dwamena, Charlotte Voogd, Davin Leif, Declan J. Lafferty, Edwige J. F. Souleyre, Erika Varkonyi‐Gasic, Francesco Gambi, Jenny Hanley, Jia‐Long Yao, J Cheung, Karine David, Ben Warren, K. B. Marsh, Kimberley C. Snowden, Kui Lin‐Wang, Lara Brian, Marcela Martínez-Sánchez, Mindy Wang, Nadeesha R. Ileperuma, Nikolai Macnee, Robert Campin, Peter A. McAtee, Revel S.M. Drummond, Richard V. Espley, Hilary S. Ireland, Rui Wu, Ross G. Atkinson, Sakuntala Karunairetnam, Sean Bulley, Shayhan Chunkath, Zac Hanley, Roy Storey, Amali H. Thrimawithana, Susan Thomson, Charles N. David, R. Testolin, Hongwen Huang, Roger P. Hellens, Robert J. Schaffer
Software Mentions: 1
Published: over 7 years ago

10.7150/ijbs.42019

miR-197-3p Represses the Proliferation of Prostate Cancer by Regulating the VDAC1/AKT/β-catenin Signaling Axis
Cited by: 34
Author(s): Qiang Huang, Bo Ma, Yixi Su, Ka-Wo Chan, Hu Qu, Jiayu Huang, Dejuan Wang, Jianguang Qiu, Huanliang Liu, Xiangling Yang, Zhongyang Wang
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12864-016-3139-7

miR-27b shapes the presynaptic transcriptome and influences neurotransmission by silencing the polycomb group protein Bmi1
Cited by: 14
Author(s): Vivian Y. Poon, Minxia Gu, Fang Ji, Antonius M.J. VanDongen, Marc Fivaz
Software Mentions: 1
Published: about 9 years ago

10.1186/s13046-015-0178-x

Confrontation of fibroblasts with cancer cells in vitro: gene network analysis of transcriptome changes and differential capacity to inhibit tumor growth
Cited by: 11
Author(s): Andrey Alexeyenko, Twana Alkasalias, Tatiana V. Pavlova, L. Szekeres, Vladimir I. Kashuba, Helene Rundqvist, Peter Wiklund, Lars Egevad, Péter Csermely, Tamás Korcsmáros, Hayrettin Guvén, George Klein
Software Mentions: 1
Published: over 10 years ago

10.1186/s13046-019-1186-z

MTMR2 promotes invasion and metastasis of gastric cancer via inactivating IFNγ/STAT1 signaling
Cited by: 30
Author(s): Lei Jiang, Junyan Liu, Yan Shi, Bo Tang, Tong‐Chuan He, Jiajia Li, Jinping Fan, Bin Wu, Xiang Xu, Yongliang Zhao, Feng Qian, You‐Hong Cui, Ping Yu
Software Mentions: 1
Published: over 6 years ago

10.1186/s12864-021-07634-x

RNA sequencing-based analysis of the magnum tissues revealed the novel genes and biological pathways involved in the egg-white formation in the laying hen
Cited by: 8
Author(s): Nirvay Sah, Donna Lee Kuehu, Vedbar S. Khadka, Youping Deng, Rajesh Jha, S. S. Wasti
Software Mentions: 1
Published: over 4 years ago

10.1186/s13046-020-01547-5

A SUMOylation-dependent HIF-1α/CLDN6 negative feedback mitigates hypoxia-induced breast cancer metastasis
Cited by: 23
Author(s): Yiyang Jia, Yantong Guo, Jin Qiu, Huinan Qu, Da Qi, Peiye Song, Xiaoli Zhang, Xinqi Wang, Wenhong Xu, Yuan Dong, Yingying Liang, Chengshi Quan
Software Mentions: 1
Published: over 5 years ago

10.1186/s13046-021-01931-9

The SRSF1/circATP5B/miR-185-5p/HOXB5 feedback loop regulates the proliferation of glioma stem cells via the IL6-mediated JAK2/STAT3 signaling pathway
Cited by: 27
Author(s): Junshuang Zhao, Yang Jiang, Haiying Zhang, Jinpeng Zhou, Lian Chen, Hao Li, Jinkun Xu, Guoqing Zhang, Zhitao Jing
Software Mentions: 1
Published: over 4 years ago

10.1186/s40634-015-0021-5

Histological characteristics of ligament healing after bio-enhanced repair of the transected goat ACL
Cited by: 11
Author(s): Duy Tan Nguyen, Sietske Dellbrügge, Paul P. Tak, Savio L‐Y. Woo, Leendert Blankevoort, Niek C. van Dijk
Software Mentions: 1
Published: over 10 years ago

10.1186/1471-2164-11-176

The embryonic genes Dkk3, Hoxd8, Hoxd9 and Tbx1 identify muscle types in a diet-independent and fiber-type unrelated way
Cited by: 23
Author(s): Janneke de Wilde, Martijn F. M. Hulshof, Mark V. Boekschoten, Philip de Groot, Egbert F. Smit, E.C.M. Mariman
Software Mentions: 1
Published: almost 16 years ago

10.1523/ENEURO.0057-21.2021

Tracking Single Molecule Dynamics in the AdultDrosophilaBrain
Cited by: 4
Author(s): Adam Hines, Bruno van Swinderen
Software Mentions: 1
Published: over 4 years ago

10.16910/jemr.11.2.4

Cross-modal music integration in expert memory: Evidence from eye movements
Cited by: 6
Author(s): Véronique Drai-Zerbib, Thierry Baccino
Software Mentions: 1
Published: almost 7 years ago

10.1155/2013/323268

Computer Aided Diagnostic Support System for Skin Cancer: A Review of Techniques and Algorithms
Cited by: 235
Author(s): Ammara Masood, Adel Al-Jumaily
Software Mentions: 1
Published: almost 13 years ago

10.3390/jfmk6030058

Spondyloarthritis and Strength Training: A 4-Year Report
Cited by: 4
Author(s): Roberto Cannataro, Lorenzo Di Maio, Andrea Malorgio, Matteo Levi Micheli, Erika Cione
Software Mentions: 1
Published: over 4 years ago

10.1186/s43141-021-00210-6

Metabolic profiling, in vitro propagation, and genetic assessment of the endangered rare plant Anarrhinum pubescens
Cited by: 4
Author(s): Asmaa Abdelsalam, Ehab Mahran, Kamal Chowdhury, Arezue Boroujerdi
Software Mentions: 1
Published: over 4 years ago

10.18632/oncotarget.23408

Identification of a novel MYO7A mutation in Usher syndrome type 1
Cited by: 8
Author(s): Cheng Ling, Hongsong Yu, Yan Jiang, Juan He, Sisi Pu, Xin Li, Li Zhang
Software Mentions: 1
Published: almost 8 years ago

10.1186/1471-2164-13-702

Is chemically dispersed oil more toxic to Atlantic cod (Gadus morhua) larvae than mechanically dispersed oil? A transcriptional evaluation
Cited by: 37
Author(s): Pål A. Olsvik, Kai Kristoffer Lie, Trond Nordtug, Bjørn Henrik Hansen
Software Mentions: 1
Published: almost 14 years ago

10.1186/1129-2377-15-S1-A3

EHMTI-0034. Pharmacological modulation of trigemino-nociceptive stimulation pd06
Cited by: 0
Author(s): I. Kröger, Arnd T. May
Software Mentions: 1
Published: about 11 years ago

10.1186/s12864-016-2984-8

Microarray based gene expression analysis of Sus Scrofa duodenum exposed to zearalenone: significance to human health
Cited by: 22
Author(s): Cornelia Braicu, Roxana Cojocneanu, Ancuța Jurj, Diana Gulei, Ionelia Țăranu, Alexandru Mihail Gras, Daniela Eliza Marin, Ioana Berindan‐Neagoe
Software Mentions: 1
Published: about 9 years ago

10.1007/s00414-020-02468-w

Comparative use of aqueous humour 1H NMR metabolomics and potassium concentration for PMI estimation in an animal model
Cited by: 20
Author(s): Emanuela Locci, Matteo Stocchero, Rossella Gottardo, Fabio De-Giorgio, Roberto Demontis, Matteo Nioi, Alberto Chighine, Franco Tagliaro, Ernesto d’Aloja
Software Mentions: 1
Published: almost 5 years ago

10.7150/ijms.47560

Hypobaric hypoxia preconditioning protects against hypothalamic neuron apoptosis in heat-exposed rats by reversing hypothalamic overexpression of matrix metalloproteinase-9 and ischemia
Cited by: 2
Author(s): Chien‐Ming Chao, Chun-Liang Chen, Ko‐Chi Niu, Cheng‐Hsien Lin, Ling-Yu Tang, Lieh Sheng Lin, Ching‐Ping Chang
Software Mentions: 1
Published: almost 6 years ago

10.18632/oncotarget.23355

Predictive factors for 6 vs 12 cycles of Folfiri-Bevacizumab in metastatic colorectal cancer
Cited by: 1
Author(s): Vincenzo Formica, Maria Teresa Ionta, B. Massidda, Giacomo Vessia, Luigi Maiorino, Rossana Casaretti, D. Natale, Giuseppe Barberis, Gianfranco Filippelli, Ettore Greco, Livio Blasi, S. Mancarella, Anna Russo, Enrico Barbato, Liberato Di Lullo, Mario Roselli
Software Mentions: 1
Published: almost 8 years ago

10.1186/1471-2164-6-46

Osteo-Promoter Database (OPD) – Promoter analysis in skeletal cells
Cited by: 9
Author(s): Inbal Grienberg, Dafna Benayahu
Software Mentions: 1
Published: over 20 years ago

10.3892/ijo.2013.2148

S(+)-ibuprofen destabilizes MYC/MYCN and AKT, increases p53 expression, and induces unfolded protein response and favorable phenotype in neuroblastoma cell lines
Cited by: 11
Author(s): Naohiko Ikegaki, Sakeenah L. Hicks, Paul L. Regan, Joshua Jacobs, Amina S. Jumbo, Payton Leonhardt, Eric Rappaport, Xiaochao Tang
Software Mentions: 1
Published: about 12 years ago

10.1155/2017/3895164

A New Feature Ensemble with a Multistage Classification Scheme for Breast Cancer Diagnosis
Cited by: 14
Author(s): İdil Işıklı Esener, Semih Ergin, Tolga Yüksel
Software Mentions: 1
Published: almost 9 years ago

10.18632/oncotarget.24398

Using computer assisted image analysis to determine the optimal Ki67 threshold for predicting outcome of invasive breast cancer
Cited by: 11
Author(s): Timothy Kwang Yong Tay, Aye Aye Thike, Nirmala Pathmanathan, Ana Richelia Jara-Lazaro, Jabed Iqbal, Adeline Shi Hui Sng, Heng Seow Ye, Jeffrey Chun Tatt Lim, Valerie Cui Yun Koh, Jane Sie Yong Tan, Joe Yeong, Zi Long Chow, Hui Hua Li, Chee Leong Cheng, Puay Hoon Tan
Software Mentions: 1
Published: over 7 years ago

10.1186/s13045-019-0700-2

SPAG5 upregulation contributes to enhanced c-MYC transcriptional activity via interaction with c-MYC binding protein in triple-negative breast cancer
Cited by: 41
Author(s): Ming Li, Anqi Li, Shuling Zhou, Hong Liu, Wentao Yang
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2164-13-54

Zonation related function and ubiquitination regulation in human hepatocellular carcinoma cells in dynamic vs. static culture conditions
Cited by: 23
Author(s): Shu Cheng, Jean‐Matthieu Prot, Éric Leclerc, Frédéric Y. Bois
Software Mentions: 1
Published: almost 14 years ago

10.3402/qhw.v11.32932

“A magical little pill that will relieve you of your womanly issues”: What young women say about menstrual suppression
Cited by: 6
Author(s): Colleen McMillan, Amanda L. Jenkins
Software Mentions: 1
Published: almost 10 years ago

10.1017/S1041610213001488

Covariant perfusion patterns provide clues to the origin of cognitive fluctuations and attentional dysfunction in Dementia with Lewy bodies
Cited by: 21
Author(s): John‐Paul Taylor, Sean J. Colloby, Ian G. McKeith, John T. O’Brien
Software Mentions: 1
Published: about 12 years ago

10.1007/s10637-019-00866-5

Clinical efficacy and safety of apatinib combined with S-1 in advanced esophageal squamous cell carcinoma
Cited by: 13
Author(s): Jian Zhao, Junmei Lei, Junyan Yu, Chengyan Zhang, Xue-feng Song, Ninggang Zhang, Yusheng Wang, Suxiang Zhang
Software Mentions: 1
Published: about 6 years ago

10.5812/ircmj.9702

How to Implement Clinical Practice Guidelines in Iran
Cited by: 11
Author(s): Reza Majdzadeh, Zahra Baradaran Seyed
Software Mentions: 1
Published: almost 12 years ago

10.3390/ijerph121113711

Growth Trajectories of Health Behaviors from Adolescence through Young Adulthood
Cited by: 50
Author(s): Nora Wiium, Kyrre Breivik, Bente Wold
Software Mentions: 1
Published: about 10 years ago

10.3390/ijerph16173058

Interpreting Subjective and Objective Measures of Job Resources: The Importance of Sociodemographic Context
Cited by: 7
Author(s): Lauren Schmitz, Courtney L. McCluney, Amanda Sonnega, Margaret T. Hicken
Software Mentions: 1
Published: about 6 years ago

10.3390/ijerph16214156

Combined 2D-QSAR, Principal Component Analysis and Sensitivity Analysis Studies on Fluoroquinolones’ Genotoxicity
Cited by: 22
Author(s): Meijin Du, Dan Zhang, Yilin Hou, Xiaohui Zhao, Yu Liu
Software Mentions: 1
Published: about 6 years ago

10.3390/ijerph16214211

Supply Chain Partner Communication in a Managed Programme in the UK Water Industry: A Case Study with Social Network Analysis
Cited by: 1
Author(s): Qing Li, Shengqiao Wang, Nicola Shaw, Victor Shi
Software Mentions: 1
Published: about 6 years ago

10.3390/ijerph16245066

Classic Bioelectrical Impedance Vector Reference Values for Assessing Body Composition in Male and Female Athletes
Cited by: 49
Author(s): Francesco Campa, Catarina N. Matias, Hannes Gatterer, Stefania Toselli, Josely Correa Koury, A. Andréoli, G Melchiorri, Luís B. Sardinha, Analiza M. Silva
Software Mentions: 1
Published: almost 6 years ago

10.3390/ijerph17031074

Vitamin D and Indices of Bone and Carbohydrate Metabolism in Postmenopausal Women Subjected to a 12-Week Aerobic Training Program—The Pilot Study
Cited by: 6
Author(s): Alicja Nowak, Monika Dalz, Ewa Śliwicka, Helena Elegańczyk-Kot, Jakub Kryściak, Katarzyna Domaszewska, Maria Laurentowska, Piotr Kocur, Barbara Pospieszna
Software Mentions: 1
Published: over 5 years ago

10.3390/ijerph17186562

Importance-Performance Matrix Analysis (IPMA) to Evaluate Servicescape Fitness Consumer by Gender and Age
Cited by: 12
Author(s): Jerónimo García Fernández, Jesús Fernández Gavira, Antonio Jesús Sánchez-Oliver, Pablo Gálvez Ruíz, Moisés Grimaldi Puyana, Gabriel Cepeda‐Carrión
Software Mentions: 1
Published: about 5 years ago

10.3390/ijerph17249195

Life Experiences with Using Community Care among People with Severe Physical Disabilities: A Comparative Analysis between South Korea and Japan
Cited by: 1
Author(s): Min Young Lee, Ye Ji Choi, Eun Young Lee, Dong A Kim, Shen‐Wu Ho
Software Mentions: 1
Published: almost 5 years ago

10.1136/jitc-2020-001435

Regorafenib combined with PD1 blockade increases CD8 T-cell infiltration by inducing CXCL10 expression in hepatocellular carcinoma
Cited by: 75
Author(s): Kohei Shigeta, Aya Matsui, Hiroto Kikuchi, Sebastian Klein, Émilie Mamessier, Ivy X. Chen, Shuichi Aoki, Shuji Kitahara, Koetsu Inoue, Ayako Shigeta, Tai Hato, Rakesh R. Ramjiawan, Daniel Staiculescu, Dieter Zopf, Lukas Fiebig, Gabriela Hobbs, Alexander Quaas, Simona Dima, Irinel Popescu, Peigen Huang, Lance L. Munn, Mark Cobbold, Lipika Goyal, Andrew X. Zhu, Rakesh K. Jain, Dan G. Duda
Software Mentions: 1
Published: about 5 years ago

10.1186/s40425-016-0172-7

31st Annual Meeting and Associated Programs of the Society for Immunotherapy of Cancer (SITC 2016): part one
Cited by: 8
Author(s): Andreas Lundqvist, Vincent van Hoef, Xiaonan Zhang, Erik Wennerberg, Julie Lorent, Kristina Witt, Laia Masvidal Sanz, Shuo Liang, S. Murray, Ola Larsson, Rolf Kiessling, Yumeng Mao, John-William Sidhom, Catherine Bessell, Jonathan J. Havel, Jonathan P. Schneck, Timothy A. Chan, Eliot Sachsenmeier, David Woods, Anders Berglund, Rupal Ramakrishnan, Andressa L. Sodré, Jeffrey S. Weber, Roberta Zappasodi, Yanyun Li, Jingjing Qi, Philip Wong, Cynthia A. Sirard, Michael A. Postow, Walter Newman, Henry Koon, Vamsidhar Velcheti, Margaret K. Callahan, Jedd D. Wolchok, Taha Merghoub, Lawrence G. Lum, Minsig Choi, Archana Thakur, Abhinav Deol, Gregory Dyson, Anthony F. Shields, Cara L. Haymaker, Marc Uemura, Ravi Murthy, Marihella James, Daqing Wang, Julie Brevard, Catherine Monaghan, S. Swann, James Geib, Mark Cornfeld, Srinivas K. Chunduru, Sudhir Agrawal, Cassian Yee, Jennifer A. Wargo, Sapna Patel, Rodabe N. Amaria, Hussein A. Tawbi, Isabella C. Glitza, Scott E. Woodman, Wen‐Jen Hwu, Michael A. Davies, Patrick Hwu, Willem W. Overwijk, Chantale Bernatchez, Adi Diab, Erminia Massarelli, Neil H. Segal, Vincent Ribrag, Ignacio Melero, Tara C. Gangadhar, Walter J. Urba, Dirk Schadendorf, Robert L. Ferris, Roch Houot, Franck Morschhauser, Theodore F. Logan, Jason J. Luke, William Sharfman, Fabrice Barlési, Patrick A. Ott, Laura Mansi, Shivaani Kummar, Gilles Salles, Cecilia Carpio, Roland Meier, Suba Krishnan, Dan McDonald, Matthew Maurer, Xuemin Gu, Jaclyn Neely, Satyendra Suryawanshi, Ronald Levy, Nikhil I. Khushalani, Jennifer Wu, Jinyu Zhang, Fahmin Basher, Mark P. Rubinstein, Mark J. Bucsek, Guanxi Qiao, Cameron R. MacDonald, Bonnie H. Hylander, Elizabeth Repasky, Shilpak Chatterjee, Anusara Daenthanasanmak, Paramita Chakraborty, Kyle Toth, Megan Meek, Elizabeth Garrett‐Mayer, Michael I. Nishimura, Chrystal M. Paulos, Craig C. Beeson, Xuezhong Yu, Shikhar Mehrotra, Fei Zhao, Kathy S. Evans, Christine Xiao, Alisha Holtzhausen, Brent A. Hanks, Nicole E. Scharping, Ashley V. Menk, Rebecca Moreci, Ryan D. Whetstone, Rebekah Dadey, Simon P. Watkins, Robert L. Ferris, Greg M. Delgoffe, Jonathan U. Peled, Sean M. Devlin, Anna Staffas, Melissa Lumish, Kori Porosnicu Rodriguez, Katya Ahr, Miguel Angel Perales, Sergio Giralt, Ying Taur, Eric G. Pamer, Marcel R.M. van den Brink, Robert R. Jenq, Nicola Annels, Hardev Pandha, Guy R. Simpson, Hugh Mostafid, Kevin J. Harrington, Alan Melcher, Mark Grose, Bronwyn Davies, Gough G. Au, Roberta Karpathy, Darren R. Shafren, Jacob Ricca, Taha Merghoub, Jedd D. Wolchok, Dmitriy Zamarin, Luciana Batista, Florence Marliot, Angela Vasaturo, Sabrina Carpentier, Cécile Poggionovo, Véronique Frayssinet, Jacques Fieschi, Marc Van den Eynde, Franck Pagès, Jérôme Galon, Fabienne Hermitte, Sean G. Smith, Khue Thy Nguyen, Sruthi Ravindranathan, Bhanu prasanth Koppolu, David A. Zaharoff, Gustavo Schvartsman, Roland Bassett, Jennifer L. McQuade, Lauren E. Haydu, Michael A. Davies, Hussein A. 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Gardai, Che‐Leung Law, Gary Means, Thomas Manley, Brendan D. Curti, Kristen A. Marrone, Gary L. Rosner, Valsamo Anagnostou, Joanne Riemer, Jessica Wakefield, Cynthia Zanhow, Stephen B. Baylin, Barbara J. Gitlitz, Julie R. Brahmer, David F. McDermott, Sabina Signoretti, Wenting Li, Charles Schloss, Jean‐Marie Michot, Philippe Armand, Wei Ding, Vincent Ribrag, Beth Christian, Arun Balakumaran, Patricia Marinello, Sabine Chlosta, Yayan Zhang, Margaret A. Shipp, Pier Luigi Zinzani, Yana G. Najjar, Lin J, Lisa H. Butterfield, Ahmad A. Tarhini, Diwakar Davar, Hassane M. Zarour, Elizabeth A. Rush, Cindy Sander, John M. Kirkwood, Siqing Fu, Todd M. Bauer, Chris Molineaux, Mark K. Bennett, Keith Orford, Kyriakos P. Papadopoulos, Sukhmani K. Padda, Sumit Shah, A. Dimitrios Colevas, Sujata Narayanan, George A. Fisher, Dana Supan, Heather A. Wakelee, Rhonda Aoki, Mark D. Pegram, Víctor M. Villalobos, Jie Liu, Chris H. Takimoto, Mark P. Chao, Jens-Peter Volkmer, Ravindra Majeti, Irving L. Weissman, Branimir I. Šikić, David B. Page, Wendy Yu, Alison Conlin, Janet Ruzich, Stacy Lewis, Anupama Kurup Acheson, Kathleen Kemmer, Kelly S. Perlewitz, Nicole Moxon, Staci L. Mellinger, Carlo Bifulco, Maritza Martel, Yoshinobu Koguchi, Bernard Fox, Walter J. Urba, Heather L. McArthur, Magnus Pedersen, Marie Christine Wulff Westergaard, Troels Holz Borch, Morten Nielsen, Per Kongsted, Trine Juhler-Nøttrup, Marco Donia, Inge Marie Svane, Jayesh Desai, Ben Markman, Shahneen Sandhu, Hui Gan, Michael Friedlander, Ben Tran, Tarek Meniawy, Joanne Lundy, Duncan Colyer, Malaka Ameratunga, Christie Norris, Jason Yang, Li Kang, Lai Wang, Liang Luo, Zhen Qin, Song Mu, Xuemei Tan, James Song, Michael Millward, Matthew H. Katz, Todd W. Bauer, Gauri R. Varadhachary, Nicolas Acquavella, Nipun B. Merchant, Gina R. Petroni, Craig L. Slingluff, Osama E. Rahma, Brian I. Rini, Thomas Powles, Mei Chen, Yang Song, Markus Puhlmann, Michael B. Atkins, Sriram Sathyanaryanan, Heather A. Hirsch, Jenny Shu, Amit Deshpande, Arun Khattri, Jason Reeves, Tong Zi, Ryan J. Brisson, Christopher J. Harvey, Jennifer S. Michaelson, Debbie A. Law, Tanguy Y. Seiwert, Jatin J. Shah, María Victoria Mateos, Morio Matsumoto, Hilary Blacklock, Albert Oriol Rocafiguera, Hartmut Goldschmidt, Shinsuke Iida, Dina Ben Yehuda, Enrique M. Ocio, Paula Rodríguez‐Otero, Sundar Jagannath, Sagar Lonial, Uma Kher, Patricia Marinello, Jesús F. San-Miguel, Jatin J. Shah, Sagar Lonial, Moacyr Ribeiro de Oliveira, Habte Yimer, María Victoria Mateos, Robert M. Rifkin, Fredrik Schjesvold, Enrique M. Ocio, Paula Rodríguez‐Otero, Jesús F. San-Miguel, Razi Ghori, Patricia Marinello, Sundar Jagannath, Anna Spreafico, Victor Lee, Roger K.C. Ngan, Ka Fai To, Myung Ju Ahn, Quan Sing Ng, Ruey‐Long Hong, Jin‐Ching Lin, Ramona F. Swaby, Christine K. Gause, Sanatan Saraf, Anthony Tak-cheung Chan, Elaine T. Lam, Nizar M. Tannir, Funda Meric‐Bernstam, Ulka N. Vaishampayan, Keith Orford, Chris Molineaux, Matt Gross, Andy MacKinnon, Sam Whiting, Martin H. Voss, Evan Y. Yu, Haiyan Wu, Charles Schloss, Mark R. Albertini, Erik A. Ranheim, Jacquelyn A. Hank, Cindy Zuleger, Thomas McFarland, Jennifer Collins, Erin Clements, Sharon M. Weber, Tracey L. Weigel, Heather B. Neuman, Greg Hartig, David Mahvi, MaryBeth Henry, Jacek Gan, Richard K. Yang, Lakeesha Carmichael, KyungMann Kim, Stephen D. Gillies, Paul M. Sondel, Vivek Subbiah, Ravi Murthy, Lori Noffsinger, Kyle Hendricks, Marnix L. Bosch, Jay M. Lee, Mi-Heon Lee, Edward B. Garon, Jonathan W. Goldman, Felicita Baratelli, Dörthe Schaue, Gerald Wang, Frances Rosen, Jane Yanagawa, Tonya C. Walser, Ying Q. Lin, Sharon Adams, Franco Marincola, Paul C. Tumeh, Fereidoun Abtin, Robert D. Suh, Karen L. Reckamp, W. Dean Wallace, Gang Zeng, David Elashoff, Sherven Sharma, Steven M. Dubinett, Nina Bhardwaj, Philip Friedlander, Anna C. Pavlick, Marc S. Ernstoff, Brian Gastman, Brent A. Hanks, Mark R. Albertini, Jason J. Luke, Tibor Keler, Tom Davis, Laura Vitale, Elad Sharon, Patrick Danaher, Chihiro Morishima, Martin A. Cheever, Steven P. Fling, Christopher R. Heery, Joseph W. Kim, Elizabeth Lamping, Jennifer L. Marté, Sheri McMahon, Lisa Cordes, Farhad Fakhrejahani, Ravi A. Madan, Kwong Y. Tsang, Caroline Jochéms, R. Salazar, Maggie Zhang, Christoph Helwig, Jeffrey Schlom, James L. Gulley, Roger Li, John Amrhein, Zvi Cohen, Monique Champagne, Ashish M. Kamat, M. Ángela Aznar, Sara Labiano, Ángel Díaz‐Lagares, Manel Esteller, Juan Sandoval, Ignacio Melero, Susannah D. Barbee, David I. Bellovin, John C. Timmer, Nebiyu Wondyfraw, Susan L. Johnson, Johanna Park, Amanda Chen, Mikayel Mkrtichyan, Amir S. Razai, Kyle S. Jones, Chelsie Y. Hata, Denise Gonzalez, Quinn L. Deveraux, Brendan P. Eckelman, Luís Borges, Rukmini Bhardwaj, Raj K. Puri, Akiko Suzuki, Pamela Leland, Bharat Joshi, Todd Bartkowiak, Ashvin R. Jaiswal, Casey R. Ager, Midan Ai, Pratha Budhani, Renee L. Chin, David S. Hong, Michael A. Curran, William D. Hastings, Maria Pinzon-Ortiz, Masato Murakami, Jason R. Dobson, David I. Quinn, Joel P. Wagner, Xianhui Rong, Pamela Shaw, Ernesta Dammassa, Guan Wei, Glenn Dranoff, Alexander Cao, Ross B. Fulton, Steven Leonardo, Kathryn Fraser, Takashi Kangas, Nadine Ottoson, Nandita Bose, Richard D. Huhn, Jeremy Graff, Jamie Lowe, Keith Gorden, Mark Uhlik, Laura Vitale, Thomas O’Neill, Jenifer Widger, Andrea Crocker, Lizhen He, Jeffrey Weidlick, Karuna Sundarapandiyan, Venky Ramakrishna, James R. Storey, Lawrence J. Thomas, J. Goldstein, Henry C. Marsh, Tibor Keler, Jamison Grailer, Julia Gilden, Pete Stecha, Denise Garvin, Jim Hartnett, Frank Fan, Mei Cong, Zhi-jie Jey Cheng, Marlon J. Hinner, Rachida-Siham Bel Aiba, Corinna Schlosser, Thomas J. Jaquin, Andrea Allersdorfer, Sven Berger, Alexander Wiedenmann, Gabriele Matschiner, Julia Schüler, Ulrich Moebius, Christine Rothe, Olwill A. Shane, Brendan Horton, Stefani Spranger, Thomas F. Gajewski, Dayson Moreira, Tomasz Adamus, Xingli Zhao, Piotr Swiderski, Sumanta K. Pal, Marcin Kortylewski, Alyssa K. Kosmides, Kevin Necochea, Jonathan P. Schneck, Kathleen M. Mahoney, Sachet A. Shukla, Nikolaos Patsoukis, Apoorvi Chaudhri, Hung Manh Pham, Peng Hua, Xia Bu, Baogong Zhu, Nir Hacohen, Catherine J. Wu, Edward F. Fritsch, Vassiliki A. Boussiotis, Gordon J. Freeman, Amy E. Moran, Fanny Polesso, Lisa Lukaesko, Andrew D. Weinberg, Emelie Rådestad, Lars Egevad, Jonas Mattsson, Berit Sundberg, Lars Henningsohn, Victor Levitsky, Michael Uhlin, William Rafelson, John L. Reagan, Loren D. Fast, Pottayil G. Sasikumar, Naremaddepalli S. Sudarshan, Raghuveer K. Ramachandra, Nagesh Gowda, Dodheri S. Samiulla, T. Chandrasekhar, Sreenivas Adurthi, Jiju Mani, Rashmi Nair, Amit Dhudashia, Nagaraj Gowda, Murali Ramachandra, Alexander Sankin, Benjamin A. Gartrell, K. N. Cumberbatch, Hongying Huang, Joshua Stern, Mark Schoenberg, Xingxing Zang, Ryan K. Swanson, M. G. Kornacker, L. E. Evans, Erika Rickel, Martin F. Wolfson, Sandrine Valsesia‐Wittmann, Tala Shekarian, François Simard, Rodrigo Nailo, Aurélie Dutour, Anne-Catherine Jallas, Christophe Caux, Aurélien Marabelle
Software Mentions: 1
Published: about 9 years ago

10.1186/s40425-019-0664-3

Molecular and metabolic pathways mediating curative treatment of a non-Hodgkin B cell lymphoma by Sindbis viral vectors and anti-4-1BB monoclonal antibody
Cited by: 15
Author(s): Ming-Chih Yu, Iris Scherwitzl, Silvana Opp, Aristotelis Tsirigos, Daniel Meruelo
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2164-10-403

Transcriptional profiling reveals developmental relationship and distinct biological functions of CD16+ and CD16- monocyte subsets
Cited by: 242
Author(s): Petronela Ancuța, Kuang-Yu Liu, Vikas Misra, Vanessa Sue Wacleche, Annie Gosselin, Xiaobo Zhou, Dana Gabuzda
Software Mentions: 1
Published: almost 17 years ago

10.1155/2019/8656282

DKK2 Impairs Tumor Immunity Infiltration and Correlates with Poor Prognosis in Pancreatic Ductal Adenocarcinoma
Cited by: 5
Author(s): Jianyu Yang, Yongsheng Jiang, Ruizhe He, Wei Liu, Minwei Yang, Ling‐Ye Tao, Xueliang Fu, Yang Shen, Jiao Li, Dejun Liu, Yan‐Miao Huo, Junfeng Zhang, Rong Hua, Zhigang Zhang, Yongwei Sun
Software Mentions: 1
Published: about 6 years ago

10.1155/2020/8835393

DHX37 Impacts Prognosis of Hepatocellular Carcinoma and Lung Adenocarcinoma through Immune Infiltration
Cited by: 9
Author(s): Yanan Xu, Qiongchao Jiang, Hejun Liu, Xiaoyun Xiao, Dinghong Yang, Phei Er Saw, Baoming Luo
Software Mentions: 1
Published: almost 5 years ago

10.1186/1471-2164-11-212

Mercury-induced hepatotoxicity in zebrafish: in vivo mechanistic insights from transcriptome analysis, phenotype anchoring and targeted gene expression validation
Cited by: 126
Author(s): Choong Yong Ung, Siew Hong Lam, Mya Myintzu Hlaing, Cecilia Lanny Winata, Svetlana Korzh, Sinnakaruppan Mathavan, Zhiyuan Gong
Software Mentions: 1
Published: over 15 years ago

10.1186/1471-2164-9-210

Genomics of an extreme psychrophile, Psychromonas ingrahamii
Cited by: 117
Author(s): Matilda White Riley, James T. Staley, Antoine Danchin, Ting Zhang Wang, Thomas Brettin, Loren Hauser, Miriam Land, Linda S. Thompson
Software Mentions: 1
Published: almost 18 years ago

10.1371/journal.pone.0079195

Systematic Construction of Kinetic Models from Genome-Scale Metabolic Networks
Cited by: 108
Author(s): Natalie J. Stanford, Timo Lubitz, Kieran Smallbone, Edda Klipp, Pedro Mendes, Wolfram Liebermeister
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0142806

SWI/SNF Subunits SMARCA4, SMARCD2 and DPF2 Collaborate in MLL-Rearranged Leukaemia Maintenance
Cited by: 19
Author(s): V. Adam Cruickshank, Patrycja Sroczyńska, Aditya Sankar, Satoru Miyagi, Carsten Friis Rundsten, Jens Vilstrup Johansen, Kristian Helin
Software Mentions: 1
Published: almost 10 years ago

10.1007/s10545-017-0039-1

Clinical and biochemical heterogeneity between patients with glycogen storage disease type IA: the added value of CUSUM for metabolic control
Cited by: 17
Author(s): Fabian Peeks, Thomas A. H. Steunenberg, Foekje de Boer, M. Estela Rubio-Gozalbo, Monique Williams, Rob Burghard, Fabienne Rajas, Maaike H. Oosterveer, David A. Weinstein, Terry G J Derks
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0029411

Age-Related Neural Dedifferentiation in the Motor System
Cited by: 115
Author(s): Joshua Carp, Joonkoo Park, Andrew Hebrank, Denise C. Park, Thad A. Polk
Software Mentions: 1
Published: almost 14 years ago

10.1371/journal.pone.0055947

The Role of Neprilysin in Regulating the Hair Cycle
Cited by: 5
Author(s): Naoko Morisaki, Atsushi Ohuchi, Shigeru Moriwaki
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0154834

Feasibility, Reliability and Predictive Value Of In-Ambulance Heart Rate Variability Registration
Cited by: 8
Author(s): Laetitia Yperzeele, Robbert-Jan Van Hooff, Ann De Smedt, Guy Nagels, Ives Hubloue, Jacques De Keyser, Raf Brouns
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0122325

Gene-Based Mapping and Pathway Analysis of Metabolic Traits in Dairy Cows
Cited by: 22
Author(s): Ngoc-Thuy Ha, Josef Johann Gross, Annette van Dorland, Jens Tetens, Georg Thaller, Martin Schlather, Rupert M. Bruckmaier, Henner Simianer
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0110299

Gene Profiling of Postnatal Mfrprd6 Mutant Eyes Reveals Differential Accumulation of Prss56, Visual Cycle and Phototransduction mRNAs
Cited by: 26
Author(s): Ramani Soundararajan, Won Seok Jung, Timothy M. Stearns, Jeremy R. Charette, Wanda L. Hicks, Gayle B. Collin, Jürgen Κ. Naggert, Mark P. Krebs, Patsy M. Nishina
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0029804

Functional Relationship between Skull Form and Feeding Mechanics in Sphenodon, and Implications for Diapsid Skull Development
Cited by: 29
Author(s): Neil Curtis, Marc E. H. Jones, Jian Shi, Paul O’Higgins, SE Evans, Michael J. Fagan
Software Mentions: 1
Published: almost 14 years ago

10.1371/journal.pone.0143184

Work Disability among Employees with Diabetes: Latent Class Analysis of Risk Factors in Three Prospective Cohort Studies
Cited by: 14
Author(s): Marianna Virtanen, Jussi Vahtera, Jenny Head, Rosemary Dray‐Spira, Annaleena Okuloff, Ádám G. Tabák, Marcel Goldberg, Jenni Ervasti, Markus Jokela, Archana Singh‐Manoux, Jaana Pentti, Marie Zins, Mika Kivimäki
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.pone.0043339

Increased Microglia/Macrophage Gene Expression in a Subset of Adult and Pediatric Astrocytomas
Cited by: 134
Author(s): Jane R. Engler, Aaron E. Robinson, Иван Смирнов, J. Graeme Hodgson, Mitchel S. Berger, Nalin Gupta, C. David James, Annette M. Molinaro, Joanna J. Phillips
Software Mentions: 1
Published: about 13 years ago

10.1186/s12864-015-1969-3

The impact of PPARα activation on whole genome gene expression in human precision cut liver slices
Cited by: 65
Author(s): Aafke W. F. Janssen, Bark Betzel, Geert Stoopen, Frits J. Berends, Ignace Janssen, Ad Peijnenburg, Sander Kersten
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0123737

Is Strain Elastography (IO-SE) Sufficient for Characterization of Liver Lesions before Surgical Resection—Or Is Contrast Enhanced Ultrasound (CEUS) Necessary?
Cited by: 9
Author(s): Ernst Michael Jung, Natascha Platz Batista da Silva, Woo Kyung Jung, S. Farkas, Christian Stroszczynski, Janine Rennert
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0126759

A Systematic Review and Meta-Analysis of the Effect of Short Birth Interval on Infant Mortality in Ethiopia
Cited by: 35
Author(s): Abel Fekadu Dadi
Software Mentions: 1
Published: over 10 years ago

10.1186/1475-2891-12-158

The metabolic signature associated with the Western dietary pattern: a cross-sectional study
Cited by: 73
Author(s): Annie Bouchard-Mercier, Iwona Rudkowska, Simone Lemieux, Patrick Couture, Marie‐Claude Vohl
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0146931

A Novel High Content Imaging-Based Screen Identifies the Anti-Helminthic Niclosamide as an Inhibitor of Lysosome Anterograde Trafficking and Prostate Cancer Cell Invasion
Cited by: 28
Author(s): Magdalena L. Circu, Samantha S. Dykes, Jennifer L. Carroll, Kinsey Kelly, Floyd Galiano, Adam H. Greer, James A. Cardelli, Hazem El-Osta
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.pone.0157775

ATP-Based Ratio Regulation of Glucose and Xylose Improved Succinate Production
Cited by: 15
Author(s): Fengyu Zhang, Jiaojiao Li, Huaiwei Liu, Quanfeng Liang, Qingsheng Qi
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0028206

Structural Position Correlation Analysis (SPCA) for Protein Family
Cited by: 1
Author(s): Qiang Du, Meng Ju, Chenghua Wang, Si-Yu Long, Ribo Huang
Software Mentions: 1
Published: almost 14 years ago

10.1371/journal.pone.0166422

Gasdermin C Is Upregulated by Inactivation of Transforming Growth Factor β Receptor Type II in the Presence of Mutated Apc, Promoting Colorectal Cancer Proliferation
Cited by: 141
Author(s): Masashi Miguchi, Takao Hinoi, Manabu Shimomura, Tomohiko Adachi, Yasufumi Saito, Hiroaki Niitsu, Mitsugu Kochi, Haruki Sada, Yusuke Sotomaru, Tsuneo Ikenoue, Kunitoshi Shigeyasu, Kohji Tanakaya, Yasuhiko Kitadai, Kazuhiro Sentani, Naohide Oue, Wataru Yasui, Hideki Ohdan
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41388-018-0402-1

CAB39L elicited an anti-Warburg effect via a LKB1-AMPK-PGC1α axis to inhibit gastric tumorigenesis
Cited by: 39
Author(s): Weilin Li, Chi Chun Wong, Xiaoming Zhang, Wei Kang, Geicho Nakatsu, Qinfu Zhao, Huarong Chen, Minnie Y.Y. Go, Philip Wai Yan Chiu, Xiaohong Wang, Jiafu Ji, Xiaona Li, Zongwei Cai, Enders Kwok Wai Ng, Jun Yu
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0073230

A Helicopter Perspective on TB Biomarkers: Pathway and Process Based Analysis of Gene Expression Data Provides New Insight into TB Pathogenesis
Cited by: 84
Author(s): Simone A. Joosten, Helen A. Fletcher, Tom H. M. Ottenhoff
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0179758

Endothelial angiogenesis is directed by RUNX1T1-regulated VEGFA, BMP4 and TGF-β2 expression
Cited by: 21
Author(s): Ko Hsun Liao, Shing Jyh Chang, Hsin Chuan Chang, Chen Li Chien, Tsung Hui Huang, Te Chia Feng, Wen Wei Lin, Chuan Chi Shih, Muh Hwa Yang, Shung Haur Yang, Chi Lin, Wei Lun Hwang, Oscar K. Lee
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0100833

Evaluation of a New Method of Fossil Retrodeformation by Algorithmic Symmetrization: Crania of Papionins (Primates, Cercopithecidae) as a Test Case
Cited by: 27
Author(s): Melissa Tallman, Nina Amenta, Eric Delson, Stephen R. Frost, Deboshmita Ghosh, Zachary S. Klukkert, Andrea Morrow, G. J. Sawyer
Software Mentions: 1
Published: over 11 years ago

10.1038/s41388-019-1009-x

Nuclear control of lung cancer cells migration, invasion and bioenergetics by eukaryotic translation initiation factor 3F
Cited by: 16
Author(s): Pauline Estèves, Laetitia Dard, Aurélia Brillac, Christophe Hubert, Saharnaz Sarlak, Benoı̂t Rousseau, Elodie Dumon, Julien Izotte, Marc Bonneu, Didier Lacombe, Jean-William Dupuy, Nívea Dias Amoêdo, Rodrigue Rossignol
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0209652

Transcriptomic and proteomic host response to Aspergillus fumigatus conidia in an air-liquid interface model of human bronchial epithelium
Cited by: 22
Author(s): Amreen Toor, Luka Culibrk, Gurpreet K. Singhera, Kyung‐Mee Moon, Anna Prudova, Leonard J. Foster, Margo M. Moore, Delbert R. Dorscheid, Scott J. Tebbutt
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0167634

K-shuff: A Novel Algorithm for Characterizing Structural and Compositional Diversity in Gene Libraries
Cited by: 7
Author(s): Kamlesh Jangid, Ming‐Hung Kao, Aishwarya Lahamge, Mark A. Williams, Stephen L. Rathbun, William B. Whitman
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0009913

The Role of NF-κB and H3K27me3 Demethylase, Jmjd3, on the Anthrax Lethal Toxin Tolerance of RAW 264.7 Cells
Cited by: 32
Author(s): Nando Dulal Das, Kyoung Hwa Jung, Young Gyu Chai
Software Mentions: 1
Published: over 15 years ago

10.1038/s41388-020-01431-8

HPV E2, E4, E5 drive alternative carcinogenic pathways in HPV positive cancers
Cited by: 42
Author(s): Shuling Ren, Daria A. Gaykalova, Theresa Guo, Alexander V. Favorov, Elana J. Fertig, Pablo Tamayo, Juan Luis Callejas‐Valera, Michael Allevato, Mara Gilardi, Jéssica Luana Dos Santos, Takahito Fukusumi, Akihiro Sakai, Mizuo Ando, Sayed Sadat, Chao Liu, Guiyin Xu, Kathleen M. Fisch, Zhiyong Wang, Alfredo A. Molinolo, J. Silvio Gutkind, Trey Ideker, Wayne M. Koch, Joseph A. Califano
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0229458

How to improve users’ intentions to continued usage of shared bicycles: A mixed method approach
Cited by: 12
Author(s): Zhan-You Wang, Demin Han, Yaopei Zhao
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0106735

Coordinate Based Meta-Analysis of Functional Neuroimaging Data Using Activation Likelihood Estimation; Full Width Half Max and Group Comparisons
Cited by: 18
Author(s): Christopher R. Tench, Radu Tanasescu, Dorothee P. Auer, William J. Cottam, Cris S. Constantinescu
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0169253

Multiband multi-echo imaging of simultaneous oxygenation and flow timeseries for resting state connectivity
Cited by: 22
Author(s): Alexander D. Cohen, Andrew S. Nencka, R. Marc Lebel, Yan Wang
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0226993

A quantitative engineering study of ecosystem robustness using thermodynamic power cycles as case studies
Cited by: 4
Author(s): Varuneswara Panyam
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0240986

Prediction of severity and subtype of fibrosing disease using model informed by inflammation and extracellular matrix gene index
Cited by: 0
Author(s): Amin Cheikhi, Zariel I. Johnson, Dana R. Julian, Sarah Wheeler, Carol Feghali‐Bostwick, Yvette P. Conley, James Lyons‐Weiler, Cecelia C. Yates
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0165899

Dynamical Model of Drug Accumulation in Bacteria: Sensitivity Analysis and Experimentally Testable Predictions
Cited by: 8
Author(s): Vesselinova Neda, Boian S. Alexandrov, Michael E. Wall
Software Mentions: 1
Published: almost 9 years ago

10.18632/oncotarget.26863

Differential microglia and macrophage profiles in human IDH-mutant and -wild type glioblastoma
Cited by: 57
Author(s): Candice C. Poon, Paul M. Gordon, Katherine Liu, Runze Yang, Susobhan Sarkar, Reza Mirzaei, Shiekh Tanveer Ahmad, Martha Hughes, V. Wee Yong, John J. Kelly
Software Mentions: 1
Published: over 6 years ago

Projects: pypi: analysis

Science Score: 90/100

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Papers Mentioning analysis 2,036