Projects: pypi: analysis

https://packages.ecosyste.ms/registries/pypi.org/packages/analysis

Source code analysis of Python programs
8 versions
Latest release: over 19 years ago
348 downloads last month

Science Score: 90/100
Starting Score: 100 points
Bonuses:
Penalties:
  • -10 PyPI ecosystem
    General-purpose ecosystem

Very Likely Science (90)

Papers Mentioning analysis 2,036

10.1155/2013/971480
Which Aspects of Postural Control Differentiate between Patients with Parkinson’s Disease with and without Freezing of Gait?
Cited by: 16
Author(s): Griet Vervoort, Evelien Nackaerts, Fatemeh Mohammadi, Elke Heremans, Sabine Verschueren, Alice Nieuwboer, Sarah Vercruysse
Software Mentions: 1
Published: almost 13 years ago
10.1186/1745-6215-16-S2-O19
The use of early decision modelling and value of information analysis in an adaptive trial design: results from the OPTIMA preliminary study
Cited by: 0
Author(s): Peter Hall, Alison Smith, Claire Hulme, Armando Vargas-Palacios, Janet A. Dunn, Andrea Marshall, John M.S. Bartlett, Robert Stein, David R. Cameron, Christopher McCabe
Software Mentions: 1
Published: about 10 years ago
10.1186/s12989-014-0065-1
Is the toxic potential of nanosilver dependent on its size?
Cited by: 69
Author(s): Anna Huk, Emilia Izak‐Nau, Bogumiła Reidy, Matthew Boyles, Albert Duschl, Iseult Lynch, Mária Dušinská
Software Mentions: 1
Published: almost 11 years ago
10.3390/pathogens9010042
Understanding Flavivirus Capsid Protein Functions: The Tip of the Iceberg
Cited by: 31
Author(s): Stephanea Sotcheff, Andrew Routh
Software Mentions: 1
Published: almost 6 years ago
10.1128/IAI.01057-15
Variation in Inflammatory Response during Pneumococcal Infection Is Influenced by Host-Pathogen Interactions but Associated with Animal Survival
Cited by: 6
Author(s): Magda S. Jonczyk, Laura Escudero, Nicolas Sylvius, M Norman, Birgitta Henriques‐Normark, Peter W. Andrew
Software Mentions: 1
Published: over 9 years ago
10.1186/1471-2105-12-84
Meta-analysis of gene expression microarrays with missing replicates
Cited by: 3
Author(s): Fan Shi, Gad Abraham, Christopher Leckie, Izhak Haviv, Adam Kowalczyk
Software Mentions: 1
Published: over 14 years ago
10.3390/pathogens4040722
Differential Contributions of the Complement Anaphylotoxin Receptors C5aR1 and C5aR2 to the Early Innate Immune Response against Staphylococcus aureus Infection
Cited by: 10
Author(s): Sarah A. Horst, Andreas Itzek, Andreas Klos, Andreas Beineke, Eva Medina
Software Mentions: 1
Published: about 10 years ago
10.3389/pore.2021.598460
Rac3 Expression and its Clinicopathological Significance in Patients With Bladder Cancer
Cited by: 12
Author(s): Mei Chen, Zhenyu Nie, Hui Cao, Yuanhui Gao, Xiaohong Wen, Chong Zhang, Shufang Zhang
Software Mentions: 1
Published: over 4 years ago
10.1155/2017/1838072
Coliform Bacteria for Bioremediation of Waste Hydrocarbons
Cited by: 15
Author(s): Majida Khanafer, H. Al-Awadhi, S. S. Radwan
Software Mentions: 1
Published: almost 9 years ago
10.1186/s13063-016-1471-5
Standardised Chinese herbal treatment delivered by GPs compared with individualised treatment administered by practitioners of Chinese herbal medicine for women with recurrent urinary tract infections (RUTI): study protocol for a randomised controlled trial
Cited by: 8
Author(s): Andrew Flower, Kim Harman, George Lewith, Michael Moore, Felicity L. Bishop, Beth Stuart, Nicholas Lampert
Software Mentions: 1
Published: over 9 years ago
10.1128/mBio.01433-18
The Cost of Metabolic Interactions in Symbioses between Insects and Bacteria with Reduced Genomes
Cited by: 44
Author(s): Nana Y. D. Ankrah, Bessem Chouaia, Angela E. Douglas
Software Mentions: 1
Published: about 7 years ago
10.1016/j.invent.2020.100346
Estimating causal effects of internet interventions in the context of nonadherence
Cited by: 5
Author(s): Hugo Hesser
Software Mentions: 1
Published: about 5 years ago
10.7150/thno.49876
Evodiamine inhibits both stem cell and non-stem-cell populations in human cancer cells by targeting heat shock protein 70
Cited by: 25
Author(s): Sangwon Hyun, Huong Thuy Le, Hye‐Young Min, Honglan Pei, Yijae Lim, Injae Song, Nguyen Thi Hai Yen, Suckchang Hong, Byung Woo Han, Ho‐Young Lee
Software Mentions: 1
Published: almost 5 years ago
10.7717/peerj.10281
Increased expression of POLR3G predicts poor prognosis in transitional cell carcinoma
Cited by: 8
Author(s): Xianhui Liu, Weiyu Zhang, Huanrui Wang, Chin-Hui Lai, Kexin Xu, Hao Hu
Software Mentions: 1
Published: about 5 years ago
10.18632/oncotarget.23355
Predictive factors for 6 <i>vs</i> 12 cycles of Folfiri-Bevacizumab in metastatic colorectal cancer
Cited by: 1
Author(s): Vincenzo Formica, Maria Teresa Ionta, B. Massidda, Giacomo Vessia, Luigi Maiorino, Rossana Casaretti, D. Natale, Giuseppe Barberis, Gianfranco Filippelli, Ettore Greco, Livio Blasi, S. Mancarella, Anna Russo, Enrico Barbato, Liberato Di Lullo, Mario Roselli
Software Mentions: 1
Published: almost 8 years ago
10.1042/BSR20203944
An epithelial–mesenchymal transition-related long noncoding RNA signature correlates with the prognosis and progression in patients with bladder cancer
Cited by: 32
Author(s): Hang Tong, Tinghao Li, Shun Gao, Hubin Yin, Honghao Cao, Weiyang He
Software Mentions: 1
Published: almost 5 years ago
10.1155/2018/8985718
In Silico Knockout Screening of<i> Plasmodium falciparum</i> Reactions and Prediction of Novel Essential Reactions by Analysing the Metabolic Network
Cited by: 8
Author(s): Jelili Oyelade, Itunuoluwa Isewon, Efosa Uwoghiren, Olufemi Aromolaran, O. O. Oladipupo
Software Mentions: 1
Published: almost 8 years ago
10.18632/oncotarget.24398
Using computer assisted image analysis to determine the optimal Ki67 threshold for predicting outcome of invasive breast cancer
Cited by: 11
Author(s): Timothy Kwang Yong Tay, Aye Aye Thike, Nirmala Pathmanathan, Ana Richelia Jara-Lazaro, Jabed Iqbal, Adeline Shi Hui Sng, Heng Seow Ye, Jeffrey Chun Tatt Lim, Valerie Cui Yun Koh, Jane Sie Yong Tan, Joe Yeong, Zi Long Chow, Hui Hua Li, Chee Leong Cheng, Puay Hoon Tan
Software Mentions: 1
Published: almost 8 years ago
10.1155/2020/2868564
Strongyloidiasis in Africa: Systematic Review and Meta-Analysis on Prevalence, Diagnostic Methods, and Study Settings
Cited by: 4
Author(s): Tadesse Hailu, Endalkachew Nibret, Arancha Amor, Abaineh Munshea
Software Mentions: 1
Published: about 5 years ago
10.1155/2015/598721
Mammalian Cell Culture Process for Monoclonal Antibody Production: Nonlinear Modelling and Parameter Estimation
Cited by: 23
Author(s): Dan Selişteanu, Dorin Şendrescu, Vlad Alexandru Georgeanu, Monica Roman
Software Mentions: 1
Published: almost 11 years ago
10.7717/peerj.9267
Potential of rice straw biochar, sulfur and ryegrass (<i>Lolium perenne</i> L.) in remediating soil contaminated with nickel through irrigation with untreated wastewater
Cited by: 27
Author(s): Inas A. Hashem, Aonalah Y. Abbas, Abo El-Nasr H. Abd El-Hamed, Haythum M.S. Salem, Omr E.M. El-Hosseiny, Mohamed Abdelsalam, Muhammad Hamzah Saleem, Wenbing Zhou, Ronggui Hu
Software Mentions: 1
Published: over 5 years ago
10.1155/2015/408169
NOD-Like Receptor Signaling in Cholesteatoma
Cited by: 15
Author(s): Anke Leichtle, Christin Klenke, Jörg Ebmeyer, Markus Georg Daerr, Karl‐Ludwig Bruchhage, A Hoffmann, Allen F. Ryan, Barbara Wollenberg, Holger Sudhoff
Software Mentions: 1
Published: almost 11 years ago
10.1172/jci.insight.149278
Multitissue 2H/13C flux analysis reveals reciprocal upregulation of renal gluconeogenesis in hepatic PEPCK-C–knockout mice
Cited by: 19
Author(s): Mohsin Rahim, Clinton M. Hasenour, Tomasz Bednarski, Curtis C. Hughey, David H. Wasserman, Jamey D. Young
Software Mentions: 1
Published: over 4 years ago
10.7717/peerj.6177
Social network analysis for the assessment of pig, cattle and buffalo movement in Xayabouli, Lao PDR
Cited by: 10
Author(s): Chaithep Poolkhet, Suwicha Kasemsuwan, Sithong Phiphakhavong, Intha Phouangsouvanh, Khamphouth Vongxay, Man Sub Shin, Wantanee Kalpravidh, Jan B. Hinrichs
Software Mentions: 1
Published: almost 7 years ago
10.1155/2018/6789704
Geographical Characterization of Tunisian Olive Tree Leaves (cv. Chemlali) Using HPLC-ESI-TOF and IT/MS Fingerprinting with Hierarchical Cluster Analysis
Cited by: 10
Author(s): Amani Taamalli, David Arráez-Román, Ana María Gómez-Caravaca, Mokhtar Zarrouk, Antonio Segura‐Carretero
Software Mentions: 1
Published: almost 8 years ago
10.1111/acel.13460
Age patterns of intra‐pair DNA methylation discordance in twins: Sex difference in epigenomic instability and implication on survival
Cited by: 1
Author(s): Qihua Tan, Shuxia Li, Mette Sørensen, Marianne Nygaard, Jonas Mengel‐From, Kaare Christensen
Software Mentions: 1
Published: about 4 years ago
10.7717/peerj.5413
Roads affect the spatial structure of butterfly communities in grassland patches
Cited by: 4
Author(s): Piotr Skórka, Magdalena Lenda, Dawid Moroń
Software Mentions: 1
Published: over 7 years ago
10.1111/1755-0998.12369
Linkage disequilibrium network analysis (LDna) gives a global view of chromosomal inversions, local adaptation and geographic structure
Cited by: 75
Author(s): Petri Kemppainen, Christopher G. Knight, Devojit Kumar Sarma, Thaung Hlaing, Anil Prakash, Yan Naung Maung Maung, Pradya Somboon, Jagadish Mahanta, Catherine Walton
Software Mentions: 1
Published: almost 11 years ago
10.7717/peerj.6280
A new testudinoid turtle from the middle to late Eocene of Vietnam
Cited by: 12
Author(s): Rafaella C Garbin, Madelaine Böhme, Walter G. Joyce
Software Mentions: 1
Published: almost 7 years ago
10.1107/S1600576716013704
Formation of swift heavy ion tracks on a rutile TiO<sub>2</sub> (001) surface
Cited by: 19
Author(s): Marko Karlušić, Sigrid Bernstorff, Zdravko Siketić, Branko Šantić, Ivančica Bogdanović-Radović, Milko Jakšić, Marika Schleberger, Maja Buljan
Software Mentions: 1
Published: about 9 years ago
10.1155/2018/7929104
Epithelial-Mesenchymal Transition during Metastasis of HPV-Negative Pharyngeal Squamous Cell Carcinoma
Cited by: 10
Author(s): Friedrich Ihler, Ronja Gratz, Hendrik A. Wolff, Bernhard G. Weiss, Mattis Bertlich, Julia Kitz, Gabriela Salinas, Margret Rave-Fränk
Software Mentions: 1
Published: almost 8 years ago
10.1038/s41398-019-0452-3
Concordance of genetic variation that increases risk for Tourette Syndrome and that influences its underlying neurocircuitry
Cited by: 23
Author(s): Mary S. Mufford, Janet Cheung, Neda Jahanshad, Celia van der Merwe, Linda Ding, Nynke A. Groenewold, Nastassja Koen, Emile R. Chimusa, Shareefa Dalvie, Raj Ramesar, James A. Knowles, Christine Löchner, Derrek P. Hibar, Peristera Paschou, Odile A. van den Heuvel, Sarah E. Medland, Jeremiah M. Scharf, Carol A. Mathews, Paul M. Thompson, Dan J. Stein
Software Mentions: 1
Published: over 6 years ago
10.7717/peerj.11953
Non-linear genetic diversity and notable population differentiation caused by low gene flow of bermudagrass [<i>Cynodon dactylon</i> (L.) Pers.] along longitude gradients
Cited by: 1
Author(s): Jing-Xue Zhang, Miaoli Wang, Jibiao Fan, Zhipeng Guo, Yongzhuo Guan, Guoqiang Qu, Chuanjie Zhang, Yuxia Guo, Xuebing Yan
Software Mentions: 1
Published: over 4 years ago
10.7717/peerj.4674
Bioinformatic analysis and identification of potential prognostic microRNAs and mRNAs in thyroid cancer
Cited by: 36
Author(s): Jianing Tang, Deguang Kong, Qiuxia Cui, Kun Wang, Dan Zhang, Qianqian Yuan, Xing Liao, Yan Gong
Software Mentions: 1
Published: over 7 years ago
10.3390/molecules24162978
Characterization of the Key Aroma Compounds in Marselan Wine by Gas Chromatography-Olfactometry, Quantitative Measurements, Aroma Recombination, and Omission Tests
Cited by: 30
Author(s): Jiaheng Lyu, Yue Ma, Yan Xu, Yao Nie, Ke Tang
Software Mentions: 1
Published: over 6 years ago
10.7717/peerj.7325
In silico analyses of CD14 molecule reveal significant evolutionary diversity, potentially associated with speciation and variable immune response in mammals
Cited by: 8
Author(s): Olanrewaju B. Morenikeji, Bolaji N. Thomas
Software Mentions: 1
Published: over 6 years ago
10.3390/metabo10070295
Application of Multiblock Analysis on Small Metabolomic Multi-Tissue Dataset
Cited by: 1
Author(s): Frida Torell, Tomas Skotare, Johan Trygg
Software Mentions: 1
Published: over 5 years ago
10.3390/metabo11080480
Metformin Decreases 2-HG Production through the MYC-PHGDH Pathway in Suppressing Breast Cancer Cell Proliferation
Cited by: 5
Author(s): Sehyun Oh, Youngup Cho, Min-Sun Chang, Sunghyouk Park, Hyuk Nam Kwon
Software Mentions: 1
Published: over 4 years ago
10.1186/s12929-018-0479-4
Znf179 E3 ligase-mediated TDP-43 polyubiquitination is involved in TDP-43- ubiquitinated inclusions (UBI) (+)-related neurodegenerative pathology
Cited by: 31
Author(s): Yi Chao Lee, Wan-Chen Huang, Ji-Ping Lin, Tzu-Jen Kao, Hui Ching Lin, Kuen-Haur Lee, Herng‐Ching Lin, Che Kun James Shen, Wen Chang Chang, Chun‐Chieh Huang
Software Mentions: 1
Published: about 7 years ago
10.3390/pharmaceutics12030212
The Effect of Cooling on the Degree of Crystallinity, Solid-State Properties, and Dissolution Rate of Multi-Component Hot-Melt Extruded Solid Dispersions
Cited by: 10
Author(s): Dean Hurley, Mark T. Davis, Gavin Walker, John G. Lyons, Clement L. Higginbotham
Software Mentions: 1
Published: over 5 years ago
10.7150/thno.53649
Siglec15 shapes a non-inflamed tumor microenvironment and predicts the molecular subtype in bladder cancer
Cited by: 179
Author(s): Jiao Hu, Anze Yu, Belaydi Othmane, Dongxu Qiu, Huihuang Li, Chao Li, Peihua Liu, Wen Ren, Minfeng Chen, Guanghui Gong, Xi Guo, Huihui Zhang, Jinbo Chen, Xiongbing Zu
Software Mentions: 1
Published: almost 5 years ago
10.1186/1471-2105-6-225
Pathway level analysis of gene expression using singular value decomposition
Cited by: 336
Author(s): John K. Tomfohr, Jun Lü, Thomas B. Kepler
Software Mentions: 1
Published: about 20 years ago
10.3390/metabo2030632
A Topological Characterization of Medium-Dependent Essential Metabolic Reactions
Cited by: 10
Author(s): Nikolaus Sonnenschein, Carsten Marr, Marc‐Thorsten Hütt
Software Mentions: 1
Published: about 13 years ago
10.1155/2014/594350
Identification of MicroRNA as Sepsis Biomarker Based on miRNAs Regulatory Network Analysis
Cited by: 42
Author(s): Jie Huang, Zhandong Sun, Wenying Yan, Yujie Zhu, Yuxin Lin, Jiajai Chen, Bairong Shen, Jian Wang
Software Mentions: 1
Published: almost 12 years ago
10.14814/phy2.14508
Prominin‐1‐expressing hepatic progenitor cells induce fibrogenesis in murine cholestatic liver injury
Cited by: 7
Author(s): Michael Fenlon, Celia Short, Jiabo Xu, Nicolas Malkoff, Elaa Mahdi, Michelle Hough, Alison Glazier, Calvin Lee, Kinji Asahina, Kasper S. Wang
Software Mentions: 1
Published: over 5 years ago
10.4172/2155-9864.1000325
Binding of Factor VIII to Lipid Nanodiscs Increases its Clotting Function in a Mouse Model of Hemophilia A
Cited by: 3
Author(s): Keri Csencsits-Smith, Krill Grushin
Software Mentions: 1
Published: almost 11 years ago
10.1002/jbmr.300
The calcium-sensing receptor mediates bone turnover induced by dietary calcium and parathyroid hormone in neonates
Cited by: 35
Author(s): Lei Shu, Ji Ji, Qi Zhu, Guiying Cao, Andrew C. Karaplis, Martin R. Pollak, Edward M. Brown, David Goltzman, Dengshun Miao
Software Mentions: 1
Published: over 14 years ago
10.1002/jcsm.12502
Muscle mass, strength, and physical performance predicting activities of daily living: a meta‐analysis
Cited by: 250
Author(s): Daniel X.M. Wang, J. Yao, Yasar Zirek, Esmee M. Reijnierse, Andrea B. Maier
Software Mentions: 1
Published: almost 6 years ago
10.7150/jca.38274
Development and validation of a robust multigene signature as an aid to predict early relapse in stage I-III clear cell and papillary renal cell cancer
Cited by: 5
Author(s): Da Long Cao, Wei Dai, Yong Huang, Lei Yu, Jun Wu, Guo Hai Shi, Hai Liang Zhang, Yao Zhu, Bo Dai, Ding Wei Ye
Software Mentions: 1
Published: almost 6 years ago
10.1111/acel.13383
Chronological and biological aging of the human left ventricular myocardium: Analysis of microRNAs contribution
Cited by: 3
Author(s): Estel Ramos-Marquès, Laura García-Mendívil, María Pérez-Zabalza, Hazel Santander-Badules, Sabarathinam Srinivasan, Juan Carlos Oliveros, Rafael Torres‐Pérez, Alberto Cebollada, José María Vallejo-Gil, Pedro Carlos Fresneda-Roldán, Javier Fañanás-Mastral, Manuel Vázquez-Sancho, Marta Matamala-Adell, Juan Fernando Sorribas-Berjón, Javier André Bellido-Morales, Francisco Javier Mancebón-Sierra, Alexánder Sebastián Vaca-Núñez, Carlos Ballester-Cuenca, Manuel Jiménez‐Navarro, José Manuel Villaescusa, Elisa Garrido-Huéscar, Margarita Segovia-Roldán, Aida Oliván-Viguera, Carlos Gómez-González, Gorka Muñíz, Emiliano Diez, Laura Ordovás, Esther Pueyo
Software Mentions: 1
Published: over 4 years ago
10.3390/metabo10030081
Metabolic Profiling of Glucose-Fed Metabolically Active Resting Zymomonas mobilis Strains
Cited by: 9
Author(s): Katsuya Fuchino, Uldis Kalnenieks, Reinis Rutkis, Māra Grūbe, Per Bruheim
Software Mentions: 1
Published: over 5 years ago
10.3390/plants9111467
Nutrient Diagnosis of Fertigated “Prata” and “Cavendish” Banana (Musa spp.) at Plot-Scale
Cited by: 14
Author(s): Antonio João de Lima Neto, José Aridiano Lima de Deus, Vagner Alves Rodrigues Filho, William Natale, Léon E. Parent
Software Mentions: 1
Published: about 5 years ago
10.3390/plants10020276
Effects of Different Planting Densities on Photosynthesis in Maize Determined via Prompt Fluorescence, Delayed Fluorescence and P700 Signals
Cited by: 8
Author(s): Wanying Chen, Bo Jia, Junyu Chen, Youzhi Feng, Yue Li, Miantai Chen, Huanhuan Liu, Zhitong Yin
Software Mentions: 1
Published: almost 5 years ago
10.18632/aging.103141
Mitochondria-related miR-574 reduces sperm ATP by targeting ND5 in aging males
Cited by: 14
Author(s): Jinzhao Ma, Qiwei Chen, Shuxian Wang, Rujun Ma, Jun Jing, Yang Yang, Yuming Feng, Zhichuan Zou, Yu Zhang, Xie Ge, Tongmin Xue, Kuan Liang, Sanxing Cao, Dandan Wang, Li Chen, Bing Yao
Software Mentions: 1
Published: over 5 years ago
10.18632/oncotarget.26863
Differential microglia and macrophage profiles in human IDH-mutant and -wild type glioblastoma
Cited by: 57
Author(s): Candice C. Poon, Paul M. Gordon, Katherine Liu, Runze Yang, Susobhan Sarkar, Reza Mirzaei, Shiekh Tanveer Ahmad, Martha Hughes, V. Wee Yong, John J. Kelly
Software Mentions: 1
Published: over 6 years ago
10.3390/plants10050931
Combining Genetic and Multidimensional Analyses to Identify Interpretive Traits Related to Water Shortage Tolerance as an Indirect Selection Tool for Detecting Genotypes of Drought Tolerance in Wheat Breeding
Cited by: 11
Author(s): Ibrahim Al-Ashkar, Nasser Al-Suhaibani, Kamel A. Abdella, Mohammed Sallam, Majed A. Alotaibi, Mahmoud F. Seleiman
Software Mentions: 1
Published: over 4 years ago
10.3390/plants9020222
Comparative Inner Morphological and Chemical Studies on Reynoutria Species in Korea
Cited by: 5
Author(s): Atif Ali Khan Khalil, Kazi-Marjahan Akter, Hye-Jin Kim, Woo Sung Park, Dong-Min Kang, Kyung Ah Koo, Mi‐Jeong Ahn
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.pbio.2005264
Peripherally derived macrophages modulate microglial function to reduce inflammation after CNS injury
Cited by: 143
Author(s): Andrew D. Greenhalgh, Juan G. Zarruk, Luke M. Healy, Sam Joshva Baskar Jesudasan, Priya Jhelum, Christopher Salmon, Albert Formanek, Matthew V. Russo, Jack P. Antel, Dorian B. McGavern, Barry W. McColl, Samuel David
Software Mentions: 1
Published: about 7 years ago
10.1371/journal.pbio.2006026
FusC, a member of the M16 protease family acquired by bacteria for iron piracy against plants
Cited by: 16
Author(s): Rhys Grinter, Iain D. Hay, Jiangning Song, Jiawei Wang, Don Teng, Vijay Dhanesakaran, Jonathan J. Wilksch, Mark R. Davies, Dene R. Littler, Simone A. Beckham, Ian R. Henderson, Richard A. Strugnell, Gordon Dougan, Trevor Lithgow
Software Mentions: 1
Published: over 7 years ago
10.7150/jca.46670
MLAA-34 knockdown shows enhanced antitumor activity via JAK2/STAT3 signaling pathway in acute monocytic leukemia
Cited by: 2
Author(s): Bo Lei, Qian Lü, Yanping Zhang, Yinxia Chen, Meili Gao, Walayat Shah, Xing‐Mei Cao, Pengyu Zhang, Wanhong Zhao, Jie Liu, Jianli Wang, Xiaoli Ma, Yun Yang, Xin Meng, Fengmei Cai, Xu Yang, Jing Luo, Baiyan Wang, Yang Zhang, Aili He, Wanggang Zhang
Software Mentions: 1
Published: almost 6 years ago
10.7150/jca.47978
Diagnostic and prognostic value of <i>FOXD1</i> expression in head and neck squamous cell carcinoma
Cited by: 8
Author(s): Shijie Qiu, Dan Li, Zhisen Shen, Qun Li, Yi Shen, Hongxia Deng, Yidong Wu, Chongchang Zhou
Software Mentions: 1
Published: almost 5 years ago
10.1155/2015/515606
Effects of Sucroferric Oxyhydroxide Compared to Lanthanum Carbonate and Sevelamer Carbonate on Phosphate Homeostasis and Vascular Calcifications in a Rat Model of Chronic Kidney Failure
Cited by: 22
Author(s): Olivier Phan, Marc Maillard, Hartmut H. Malluche, Jean-Christophe Stehle, Felix Funk, Michel Burnier
Software Mentions: 1
Published: almost 11 years ago
10.1128/mBio.00849-20
CsrA-Mediated Translational Activation of <i>ymdA</i> Expression in Escherichia coli
Cited by: 12
Author(s): Andrew Renda, Stephanie Poly, Ying Jung Lai, Archana Pannuri, Helen Yakhnin, Anastasia H. Potts, Philip C. Bevilacqua, Tony Romeo, Paul Babitzke
Software Mentions: 1
Published: about 5 years ago
10.3390/metabo9040066
Computational Methods for the Discovery of Metabolic Markers of Complex Traits
Cited by: 27
Author(s): Michael Y Lee, Ting Hu
Software Mentions: 1
Published: over 6 years ago
10.1155/2015/898592
The Plant Growth-Promoting Bacteria<i>Azospirillum amazonense</i>: Genomic Versatility and Phytohormone Pathway
Cited by: 16
Author(s): Ricardo Cecagno, Tiago Ebert Fritsch, Irene Silveira Schrank
Software Mentions: 1
Published: almost 11 years ago
10.7150/jca.55079
Overexpression of ZNF460 predicts worse survival and promotes metastasis through JAK2/STAT3 signaling pathway in patient with colon cancer
Cited by: 13
Author(s): Tong Hao, Jiannan Xu, Sufen Fang, Jian Jiang, Xinyuan Chen, Wenhui Wu, Liang Li, Mingzhe Li, Changhua Zhang, Yulong He
Software Mentions: 1
Published: almost 5 years ago
10.3390/nu13010194
The Effect of Gum Arabic (Acacia senegal) on Cardiovascular Risk Factors and Gastrointestinal Symptoms in Adults at Risk of Metabolic Syndrome: A Randomized Clinical Trial
Cited by: 13
Author(s): Amjad H. Jarrar, Lily Stojanovska, Vasso Apostolopoulos, Jack Feehan, Malik Bataineh, Leila Cheikh Ismail, Ayesha S. Al Dhaheri
Software Mentions: 1
Published: almost 5 years ago
10.1186/s13293-014-0011-9
Sexually dimorphic characteristics of the small intestine and colon of prepubescent C57BL/6 mice
Cited by: 58
Author(s): Wilma T. Steegenga, Mona Mischke, Carolien Lute, Mark V. Boekschoten, Maurien Pruis, Ágnes Lendvai, Henkjan J. Verkade, Jos Boekhorst, Harro M. Timmerman, Torsten Plösch, Michael Müller
Software Mentions: 1
Published: about 11 years ago
10.1371/journal.pcbi.1007036
Enhanced flux prediction by integrating relative expression and relative metabolite abundance into thermodynamically consistent metabolic models
Cited by: 56
Author(s): Vikash Pandey, Noushin Hadadi, Vassily Hatzimanikatis
Software Mentions: 1
Published: over 6 years ago
10.1186/s13018-019-1445-x
Artesunate prevents knee intraarticular adhesion via PRKR-like ER kinase (PERK) signal pathway
Cited by: 6
Author(s): Hui Chen, Tao Jin, Jingcheng Wang, Lianqi Yan
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.pcbi.1002662
Shrinking the Metabolic Solution Space Using Experimental Datasets
Cited by: 75
Author(s): Jennifer L. Reed
Software Mentions: 1
Published: about 13 years ago
10.1371/journal.pcbi.1000145
Intramolecular Cohesion of Coils Mediated by Phenylalanine–Glycine Motifs in the Natively Unfolded Domain of a Nucleoporin
Cited by: 49
Author(s): Viswanathan V Krishnan, Edmond Y. Lau, Justin Yamada, Daniel P. Denning, Samir S. Patel, Michael E. Colvin, Michael Rexach
Software Mentions: 1
Published: over 17 years ago
10.18632/aging.202886
Identification of a mesenchymal-related signature associated with clinical prognosis in glioma
Cited by: 5
Author(s): Zhengwei Zhang, Jie Chen, Xiuhao Huo, Gang Zong, Kebing Huang, Meng Cheng, Libo Sun, Xiaoyu Yue, Erbao Bian, Bing Zhao
Software Mentions: 1
Published: over 4 years ago
10.3390/molecules26164839
Chemometrics for the Identification of Nitrogen and Acid Compounds in Milk-Whey as By-Products from Crescenza and Grana Padano Type Cheese-Making
Cited by: 1
Author(s): Stefania Barzaghi, Lucia Monti, Laura Marinoni, T. M. P. Cattaneo
Software Mentions: 1
Published: over 4 years ago
10.1242/bio.056432
Biophysical and biochemical properties of Deup1 self-assemblies: a potential driver for deuterosome formation during multiciliogenesis
Cited by: 6
Author(s): Shohei Yamamoto, Ryoichi Yabuki, Daiju Kitagawa
Software Mentions: 1
Published: over 4 years ago
10.1098/rsbl.2018.0367
The dynamic role of the ilio-sacral joint in jumping frogs
Cited by: 8
Author(s): Christopher T. Richards, Enrico A. Eberhard, Amber J. Collings
Software Mentions: 1
Published: about 7 years ago
10.1007/s00432-021-03753-w
The association of immunosurveillance and distant metastases in colorectal cancer
Cited by: 4
Author(s): Sven Jacob, Vindi Jurinović, Christopher Lampert, Elise Pretzsch, Jörg Kumbrink, Jens Neumann, Haoyu Ren, Bernhard W. Renz, Thomas Kirchner, Markus Guba, Jens Werner, Martin K. Angele, Florian Bösch
Software Mentions: 1
Published: about 4 years ago
10.1186/s12968-016-0312-8
Feasibility of cardiovascular magnetic resonance derived coronary wave intensity analysis
Cited by: 5
Author(s): Claire E. Raphael, Jennifer Keegan, Kim H. Parker, Robin Simpson, J Collinson, Vassilios Vassiliou, Ricardo Wage, Peter Drivas, Stephen Strain, Robert Cooper, Ranil de Silva, Rod Stables, Carlo Di Mario, Michael Frenneaux, Dudley J Pennell, Justin E. Davies, Alun D. Hughes, David N. Firmin, Sanjay K. Prasad
Software Mentions: 1
Published: almost 9 years ago
10.1371/journal.pcbi.1006364
Comparative structural dynamic analysis of GTPases
Cited by: 18
Author(s): Hongyang Li, Xin‐Qiu Yao, Barry J. Grant
Software Mentions: 1
Published: about 7 years ago
10.1111/j.1582-4934.2012.01567.x
Interactions between inflammatory signals and the progesterone receptor in regulating gene expression in pregnant human uterine myocytes
Cited by: 33
Author(s): Yun Lee, Suren R. Sooranna, Vasso Terzidou, Mark Christian, Jan J. Brosens, Kaisa Huhtinen, Matti Poutanen, Geraint Barton, Mark R. Johnson, Phillip R. Bennett
Software Mentions: 1
Published: about 13 years ago
10.1128/mSphere.00026-17
Unexplored Archaeal Diversity in the Great Ape Gut Microbiome
Cited by: 71
Author(s): Kasie Raymann, Andrew H. Moeller, Andrew L. Goodman, Howard Ochman
Software Mentions: 1
Published: over 8 years ago
10.1155/2020/2901439
Dynamic and Static Nature of Br4σ(4c–6e) and Se2Br5σ(7c–10e) in the Selenanthrene System and Related Species Elucidated by QTAIM Dual Functional Analysis with QC Calculations
Cited by: 1
Author(s): Satoko Hayashi, Taro Nishide, Warô Nakanishi
Software Mentions: 1
Published: over 5 years ago
10.3390/metabo7040057
Metabolic Profile of the Cellulolytic Industrial Actinomycete Thermobifida fusca
Cited by: 9
Author(s): Niti Vanee, J. Paul Brooks, Stephen S. Fong
Software Mentions: 1
Published: about 8 years ago
10.3390/metabo11080486
Investigation of Andrographolide Effect on Non-Infected Red Blood Cells Using the 1H-NMR-Based Metabolomics Approach
Cited by: 4
Author(s): Ashraf Ahmad Issa Alapid, Roslaini Abd Majid, Zaid O. Ibraheem, Ahmed Mediani, Intan Safinar Ismail, Ngah Zasmy Unyah, Sharif Alhassan Abdullahi, Norshariza Nordin, Mohammed Nasiru Wana, Rusliza Basir
Software Mentions: 1
Published: over 4 years ago
10.1371/journal.pcbi.1000812
The Carbon Assimilation Network in Escherichia coli Is Densely Connected and Largely Sign-Determined by Directions of Metabolic Fluxes
Cited by: 46
Author(s): Valentina Baldazzi, Delphine Ropers, Yves Markowicz, Daniel Kahn, Johannes Geiselmann, Hidde de Jong
Software Mentions: 1
Published: over 15 years ago
10.3390/metabo9020025
The OMICs Window into Nonalcoholic Fatty Liver Disease (NAFLD)
Cited by: 5
Author(s): Lucia Carulli, Giulia Zanca, Filippo Schepis, Erica Villa
Software Mentions: 1
Published: almost 7 years ago
10.3390/ijms20112655
Estrogen Receptor Positive Breast Cancer with High Expression of Androgen Receptor has Less Cytolytic Activity and Worse Response to Neoadjuvant Chemotherapy but Better Survival
Cited by: 58
Author(s): Maiko Okano, Masanori Oshi, Ali Linsk Butash, Mariko Asaoka, Eriko Katsuta, Xuan Peng, Qianya Qi, Yan Li, Kazuaki Takabe
Software Mentions: 1
Published: over 6 years ago
10.1186/s13075-019-1816-z
Microbiome dysbiosis is associated with disease duration and increased inflammatory gene expression in systemic sclerosis skin
Cited by: 24
Author(s): Michael E. Johnson, Jennifer M Franks, Guoshuai Cai, Bhaven K. Mehta, Tammara A. Wood, Kimberly Archambault, Patricia A. Pioli, Robert W. Simms, Nicole M. Orzechowski, Sarah T. Arron, Michael L. Whitfield
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.pcbi.1003368
Structural Control of Metabolic Flux
Cited by: 10
Author(s): Max Sajitz-Hermstein, Zoran Nikoloski
Software Mentions: 1
Published: almost 12 years ago
10.1371/journal.pcbi.1002415
System-Level Insights into Yeast Metabolism by Thermodynamic Analysis of Elementary Flux Modes
Cited by: 67
Author(s): Stefan J. Jol, Anne Kümmel, Marco Terzer, Jörg Stelling, Matthias Heinemann
Software Mentions: 1
Published: over 13 years ago
10.1371/journal.pcbi.1000970
An Automated Phenotype-Driven Approach (GeneForce) for Refining Metabolic and Regulatory Models
Cited by: 43
Author(s): Dipak Barua, Joonhoon Kim, Jennifer L. Reed
Software Mentions: 1
Published: about 15 years ago
10.1371/journal.pcbi.1004075
Proportionality: A Valid Alternative to Correlation for Relative Data
Cited by: 219
Author(s): David Lovell, Vera Pawlowsky‐Glahn, J. J. Egozcue, Samuel Marguerat, Jürg Bähler
Software Mentions: 1
Published: over 10 years ago
10.1093/molehr/gaz034
Continuous behavioural ‘switching’ in human spermatozoa and its regulation by Ca2+-mobilising stimuli
Cited by: 10
Author(s): Cosmas Ezekaibeya Achikanu, Joao Correia, Héctor Alejandro Guidobaldi, Laura Cecilia Giojalas, Christopher L.R. Barratt, Sarah Martins da Silva, Stephen J. Publicover
Software Mentions: 1
Published: over 6 years ago
10.1371/currents.md.9a3e357a0154d01050b591601cbd4fdb
Benefits of Pre-natal Taurine Supplementation in Preventing the Onset of Acute Damage in the Mdx Mouse
Cited by: 12
Author(s): Robert G. Barker, Deanna Horvath, Chris van der Poel, Robyn M. Murphy
Software Mentions: 1
Published: almost 9 years ago
10.3390/metabo6040045
Quantification of Microbial Phenotypes
Cited by: 2
Author(s): Verónica Martínez, Jens O. Krömer
Software Mentions: 1
Published: almost 9 years ago
10.1371/journal.pgen.1002374
SREBP Coordinates Iron and Ergosterol Homeostasis to Mediate Triazole Drug and Hypoxia Responses in the Human Fungal Pathogen Aspergillus fumigatus
Cited by: 148
Author(s): Michael Blatzer, Bridget M. Barker, Sven D. Willger, Nicola Beckmann, Sara J. Blosser, E. Jean Cornish, Aurélien Mazurie, Nora Grahl, Hubertus Haas, Robert A. Cramer
Software Mentions: 1
Published: almost 14 years ago
10.1371/journal.pgen.1000977
An Integration of Genome-Wide Association Study and Gene Expression Profiling to Prioritize the Discovery of Novel Susceptibility Loci for Osteoporosis-Related Traits
Cited by: 190
Author(s): Yi‐Hsiang Hsu, M. Carola Zillikens, Scott G. Wilson, Charles R. Farber, Serkalem Demissie, Nicole Soranzo, Estelle N. Bianchi, Elin Grundberg, Liming Liang, J. Brent Richards, Karol Estrada, Yanhua Zhou, Atila van Nas, Miriam F. Moffatt, Guangju Zhai, Albert Hofman, Joyce B. J. van Meurs, Huibert A. P. Pols, Roger I. Price, Olle Nilsson, Tomi Pastinen, L. Adrienne Cupples, Aldons J. Lusis, Eric E. Schadt, Serge Ferrari, André G. Uitterlinden, Fernando Rivadeneira, Timothy D. Spector, David Karasik, Douglas P. Kiel
Software Mentions: 1
Published: over 15 years ago
10.1186/ar4096
Excessive bone formation in a mouse model of ankylosing spondylitis is associated with decreases in Wnt pathway inhibitors
Cited by: 74
Author(s): Katelin Haynes, Allison R. Pettit, Ran Duan, Hsu‐Wen Tseng, Tibor T. Glant, Matthew A. Brown, Gethin Thomas
Software Mentions: 1
Published: almost 14 years ago
10.7150/thno.55074
FOSL2 promotes VEGF-independent angiogenesis by transcriptionnally activating Wnt5a in breast cancer-associated fibroblasts
Cited by: 33
Author(s): Xueying Wan, Shengdong Guan, Yixuan Hou, Yilu Qin, Hualin Zeng, Liping Yang, Yina Qiao, Shuiqing Liu, Qiao Li, Tengchuan Jin, Yumin Qiu, Manran Liu
Software Mentions: 1
Published: almost 5 years ago
10.1093/bioinformatics/btaa813
FBA reveals guanylate kinase as a potential target for antiviral therapies against SARS-CoV-2
Cited by: 34
Author(s): Alina Renz, Lina Widerspick, Andreas Dräger
Software Mentions: 1
Published: almost 5 years ago