Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: analysis

https://packages.ecosyste.ms/registries/pypi.org/packages/analysis

Source code analysis of Python programs
8 versions
Latest release: over 18 years ago
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Papers Mentioning analysis 2,036

10.1186/1471-2164-10-90
Expression profiling and Ingenuity biological function analyses of interleukin-6- versus nerve growth factor-stimulated PC12 cells
Cited by: 19
Author(s): Dieter Kunz, Gaby Walker, Marc Bedoucha, Ulrich Certa, Pia März-Weiss, Beatrice Dimitriades-Schmutz, U. Otten
Software Mentions: 1
Published: almost 16 years ago
10.1186/s12877-021-02261-3
Clinical features and outcomes of COVID-19 in older adults: a systematic review and meta-analysis
Cited by: 67
Author(s): Sunny Singhal, Pramod Kumar, Sumitabh Singh, Srishti Saha, Aparajit Ballav Dey
Software Mentions: 1
Published: over 3 years ago
10.1186/s12913-018-3742-1
Cross-sectoral integration in youth-focused health and social services in Canada: a social network analysis
Cited by: 8
Author(s): Rachel McGihon, Lisa D. Hawke, Gloria Chaim, Joanna Henderson
Software Mentions: 1
Published: almost 6 years ago
10.1186/1472-6963-14-355
Adjusting for geographic variation in observational comparative effectiveness studies: a case study of antipsychotics using state Medicaid data
Cited by: 3
Author(s): Elisabeth Dowling Root, Deborah S.K. Thomas, Elizabeth J. Campagna, Elaine H. Morrato
Software Mentions: 1
Published: about 10 years ago
10.1186/s12916-016-0739-7
Evaluation of computer-based computer tomography stratification against outcome models in connective tissue disease-related interstitial lung disease: a patient outcome study
Cited by: 68
Author(s): Joseph Jacob, Brian J. Bartholmai, Srinivasan Rajagopalan, Anne Brun, Ryoko Egashira, Ronald A. Karwoski, Maria Kokosi, Athol U. Wells, David M. Hansell
Software Mentions: 1
Published: about 8 years ago
10.1186/s12916-019-1465-8
Body composition of children with moderate and severe undernutrition and after treatment: a narrative review
Cited by: 30
Author(s): Jonathan C. K. Wells
Software Mentions: 1
Published: almost 5 years ago
10.1186/s12881-017-0395-6
NT5C2 novel splicing variant expands the phenotypic spectrum of Spastic Paraplegia (SPG45): case report of a new member of thin corpus callosum SPG-Subgroup
Cited by: 14
Author(s): Mahmoud F. Elsaid, Khalid Ibrahim, Nader Chalhoub, Ahmed Elsotouhy, Noora El Mudehki, Alice Kamal Abd El Aleem
Software Mentions: 1
Published: over 7 years ago
10.1186/1755-8794-2-37
Gene expression profiling identifies activated growth factor signaling in poor prognosis (Luminal-B) estrogen receptor positive breast cancer
Cited by: 54
Author(s): Sherene Loi, Christos Sotiriou, Benjamin Haibe‐Kains, Françoise Lallemand, Nelly Conus, Martine Piccart, Terence P. Speed, Grant A. McArthur
Software Mentions: 1
Published: over 15 years ago
10.1186/s12920-017-0284-z
In silico identification of potential key regulatory factors in smoking-induced lung cancer
Cited by: 24
Author(s): Salem A. El-aarag, Amal Mahmoud, Medhat H. Hashem, Hatem Abd Elkader, Alaa A. Hemeida, Mahmoud ElHefnawi
Software Mentions: 1
Published: over 7 years ago
10.1186/1471-2288-12-138
Simulation evaluation of statistical properties of methods for indirect and mixed treatment comparisons
Cited by: 71
Author(s): Fujian Song, Allan Clark, Max Bachmann, Jim Maas
Software Mentions: 1
Published: about 12 years ago
10.1186/s12866-017-1073-8
An integrated computational-experimental approach reveals Yersinia pestis genes essential across a narrow or a broad range of environmental conditions
Cited by: 16
Author(s): Nicola J. Senior, Kalesh Sasidharan, Richard J. Saint, Andrew E. Scott, Mitali Sarkar‐Tyson, Philip M. Ireland, Helen L. Bullifent, Zheng Yang, Karen Moore, Petra C. F. Oyston, Timothy P. Atkins, Helen S. Atkins, Orkun S. Soyer, Richard W. Titball
Software Mentions: 1
Published: over 7 years ago
10.1186/s12866-016-0770-z
Bacterial community characterization of water and intestine of the shrimp Litopenaeus stylirostris in a biofloc system
Cited by: 171
Author(s): Emilie Cardona, Yannick Gueguen, Kévin Magré, Bénédicte Lorgeoux, David Piquemal, Fabien Pierrat, Florian Noguier, Denis Saulnier
Software Mentions: 1
Published: over 8 years ago
10.1186/1471-2180-10-244
Coxiella burnetii Nine Mile II proteins modulate gene expression of monocytic host cells during infection
Cited by: 30
Author(s): Saugata Mahapatra, Patricia Ayoubi, Edward I. Shaw
Software Mentions: 1
Published: about 14 years ago
10.1186/1471-2199-10-106
Quantitative TaqMan® real-time PCR assays for gene expression normalisation in feline tissues
Cited by: 73
Author(s): Yvonne Kessler, A. Katrin Helfer-Hungerbuehler, Valentino Cattori, Marina L. Meli, Bigna Zellweger, Pete Ossent, Barbara Riond, Claudia E Reusch, Hans Lutz, Regina Hofmann‐Lehmann
Software Mentions: 1
Published: almost 15 years ago
10.1186/s12891-017-1682-2
Objective impairments of gait and balance in adults living with HIV-1 infection: a systematic review and meta-analysis of observational studies
Cited by: 35
Author(s): Karina Berner, Linzette Morris, Jochen Baumeister, Quinette Louw
Software Mentions: 1
Published: over 7 years ago
10.1186/1471-2474-13-71
Effects of neuromuscular electrical stimulation, laser therapy and LED therapy on the masticatory system and the impact on sleep variables in cerebral palsy patients: a randomized, five arms clinical trial
Cited by: 4
Author(s): Lílian Chrystiane Giannasi, Miriam Yumi Matsui, Sandra Regina de Freitas Batista, Camila Teixeira Hardt, Carla Paes Gomes, José Benedito Oliveira Amorim, Isabella de Carvalho Aguiar, Luanda André Collange, Israel Reis Santos, Ismael Souza Dias, Cláudia Santos Oliveira, Luís Vicente Franco de Oliveira, Mônica Fernandes Gomes
Software Mentions: 1
Published: over 12 years ago
10.1186/1471-2474-8-116
Mechanical properties during healing of Achilles tendon ruptures to predict final outcome: A pilot Roentgen stereophotogrammetric analysis in 10 patients
Cited by: 80
Author(s): Torsten Schepull, Joanna Kvist, Christer Andersson, Per Aspenberg
Software Mentions: 1
Published: almost 17 years ago
10.1186/1471-2202-7-S1-S10
Mathematical modeling of intracellular signaling pathways
Cited by: 126
Author(s): Edda Klipp, Wolfram Liebermeister
Software Mentions: 1
Published: about 18 years ago
10.1186/s12868-016-0270-y
A mitochondrial division inhibitor, Mdivi-1, inhibits mitochondrial fragmentation and attenuates kainic acid-induced hippocampal cell death
Cited by: 47
Author(s): Hwajin Kim, Jong Youl Lee, Keon Jae Park, Won Ho Kim, Gu Seob Roh
Software Mentions: 1
Published: over 8 years ago
10.1186/s12886-017-0543-y
Visual outcome following bilateral non-arteritic anterior ischemic optic neuropathy: a systematic review and meta-analysis
Cited by: 7
Author(s): Shay Keren, Mario Zanolli, Gad Dotan
Software Mentions: 1
Published: over 7 years ago
10.1186/s12903-021-01690-1
Dental caries among Finnish teenagers participating in physical activity and diet intervention: association with anthropometrics and behavioural factors
Cited by: 2
Author(s): Mirja Methuen, Sofia Kauppinen, Anna Liisa Suominen, Aino-Maija Eloranta, Juuso Väistö, Timo A. Lakka, Hannu Vähänikkilä, Vuokko Anttonen
Software Mentions: 1
Published: over 3 years ago
10.1186/s12870-016-0915-0
Insights into the adaptive response of Arabidopsis thaliana to prolonged thermal stress by ribosomal profiling and RNA-Seq
Cited by: 48
Author(s): Radoslaw Lukoszek, Peter E. Feist, Zoya Ignatova
Software Mentions: 1
Published: about 8 years ago
10.1186/1471-2229-14-170
Assessment of pleiotropic transcriptome perturbations in Arabidopsis engineered for indirect insect defence
Cited by: 5
Author(s): Benyamin Houshyani, Alexander R. van der Krol, R.J. Bino, Harro J. Bouwmeester
Software Mentions: 1
Published: over 10 years ago
10.1186/1471-2229-10-115
Plant neighbor identity influences plant biochemistry and physiology related to defense
Cited by: 102
Author(s): Amanda K. Broz, Corey D. Broeckling, Clelia De‐la‐Peña, Matthew R. Lewis, Erick Greene, Ragan M. Callaway, Lloyd W. Sumner, Jorge M. Vivanco
Software Mentions: 1
Published: over 14 years ago
10.1186/1471-2393-14-215
Determinants of cesarean delivery: a classification tree analysis
Cited by: 21
Author(s): Elisa Stivanello, Paola Rucci, Jacopo Lenzi, Maria Pia Fantini
Software Mentions: 1
Published: over 10 years ago
10.1186/1753-6561-5-S9-S52
Enrichment analysis of genetic association in genes and pathways by aggregating signals from both rare and common variants
Cited by: 3
Author(s): Wei Yang, Chang Gu
Software Mentions: 1
Published: almost 13 years ago
10.1186/s12888-016-0870-1
Analysis of scientific collaboration in Chinese psychiatry research
Cited by: 3
Author(s): Ying Wu, Xing Jin
Software Mentions: 1
Published: over 8 years ago
10.1186/s12889-019-6760-y
A short history of time use research; implications for public health
Cited by: 51
Author(s): Adrian Bauman, Michael Bittman, Jonathan Gershuny
Software Mentions: 1
Published: over 5 years ago
10.1186/s12889-019-7759-0
UPRIGHT, a resilience-based intervention to promote mental well-being in schools: study rationale and methodology for a European randomized controlled trial
Cited by: 27
Author(s): Carlota Las Hayas, Irantzu Izco-Basurko, Ane Fullaondo, Silvia Gabrielli, Antoni Zwiefka, Odin Hjemdal, Dóra Guðrún Guðmundsdóttir, Hans Henrik Knoop, Anna S. Ólafsdóttir, Valeria Donisi, Sara Carbone, Silvia Rizzi, Iwona Mazur, Anna Królicka-Deręgowska, Roxanna Morote, Frederick Anyan, Mette Marie Ledertoug, Nina Tange, Ingibjörg V. Kaldalóns, Bryndís Jóna Jónsdóttir, Ana González-Pinto, Itziar Vergara, Nerea González, Javier Mar Medina, Esteban de Manuel Keenoy
Software Mentions: 1
Published: about 5 years ago
10.1186/1756-0500-5-325
A fitness index for transplantation of machine-perfused cadaveric rat livers
Cited by: 18
Author(s): Sinem Perk, Maria-Louisa Izamis, Herman Tolboom, Basak E. Uygun, Martin L. Yarmush, Korkut Uygun
Software Mentions: 1
Published: over 12 years ago
10.1186/s12900-016-0067-3
Human sex hormone-binding globulin as a potential target of alternate plasticizers: an in silico study
Cited by: 18
Author(s): Ishfaq Ahmad Sheikh, Muhammad Yasir, Muhammad Abu‐Elmagd, Tanveer Ali Dar, Adel M. Abuzenadah, Ghazi A. Damanhouri, Mohammed Al‐Qahtani, M.A. Beg
Software Mentions: 1
Published: about 8 years ago
10.1186/s12918-014-0100-8
A systems approach identifies co-signaling molecules of early growth response 1 transcription factor in immobilization stress
Cited by: 6
Author(s): Nikolaos A. Papanikolaou, Andrej Tillinger, Xiaoping Li, Athanasios G. Papavassiliou, Esther L. Sabban
Software Mentions: 1
Published: about 10 years ago
10.1186/1752-0509-6-149
Modeling and analysis of flux distributions in the two branches of the phosphotransferase system in Pseudomonas putida
Cited by: 6
Author(s): Andreas Kremling, Katharina Pflüger‐Grau, Max Chavarría, Jacek Puchałka, Vítor A. P. Martins dos Santos, Vı́ctor de Lorenzo
Software Mentions: 1
Published: almost 13 years ago
10.1186/1752-0509-7-46
Inferring ancient metabolism using ancestral core metabolic models of enterobacteria
Cited by: 11
Author(s): David J. Baumler, Bing Ma, Jennifer L. Reed, Nicole T. Perna
Software Mentions: 1
Published: almost 12 years ago
10.1186/1752-0509-4-120
Antimalarial drug targets in Plasmodium falciparum predicted by stage-specific metabolic network analysis
Cited by: 107
Author(s): Carola Huthmacher, Andreas Hoppe, Sascha Bulik, Hermann−Georg Holzhütter
Software Mentions: 1
Published: about 14 years ago
10.1186/1752-0509-5-182
The evolution of metabolic networks of E. coli
Cited by: 62
Author(s): David J. Baumler, Roman G Peplinski, Jennifer L. Reed, Jeremy D. Glasner, Nicole T. Perna
Software Mentions: 1
Published: almost 14 years ago
10.1186/1752-0509-6-27
Metabolic network analysis predicts efficacy of FDA-approved drugs targeting the causative agent of a neglected tropical disease
Cited by: 40
Author(s): Arvind K. Chavali, Anna S. Blazier, José L. Tlaxca, Paul A. Jensen, Richard D. Pearson, Jason A. Papin
Software Mentions: 1
Published: over 12 years ago
10.1186/1752-0509-1-31
Integration of enzyme activities into metabolic flux distributions by elementary mode analysis
Cited by: 48
Author(s): Hiroyuki Kurata, Quanyu Zhao, Ryuichi Okuda, Kazuyuki Shimizu
Software Mentions: 1
Published: over 17 years ago
10.1186/1752-0509-7-131
(Im)Perfect robustness and adaptation of metabolic networks subject to metabolic and gene-expression regulation: marrying control engineering with metabolic control analysis
Cited by: 25
Author(s): Fei He, Vincent Fromion, Hans V. Westerhoff
Software Mentions: 1
Published: about 11 years ago
10.1186/1752-0509-5-5
SPABBATS: A pathway-discovery method based on Boolean satisfiability that facilitates the characterization of suppressor mutants
Cited by: 11
Author(s): Lope A. Flórez, Katrin Gunka, Rafael Polanía, Stefan Tholen, Jörg Stülke
Software Mentions: 1
Published: almost 14 years ago
10.1186/1752-0509-2-60
Oxygen dependence of metabolic fluxes and energy generation of Saccharomyces cerevisiae CEN.PK113-1A
Cited by: 105
Author(s): Paula Jouhten, Eija Rintala, Anne Huuskonen, Anu Tamminen, Mervi Toivari, Marilyn G. Wiebe, Laura Ruohonen, Merja Penttilä, Hannu Maaheimo
Software Mentions: 1
Published: over 16 years ago
10.1186/1752-0509-7-S5-S5
BRCA-Monet: a breast cancer specific drug treatment mode-of-action network for treatment effective prediction using large scale microarray database
Cited by: 6
Author(s): Chifeng Ma, Hung-I Harry Chen, Mario Flores, Yufei Huang, Yidong Chen
Software Mentions: 1
Published: almost 11 years ago
10.1186/s12918-014-0134-y
Distinct metabolic responses of an ovarian cancer stem cell line
Cited by: 22
Author(s): Kathleen A. Vermeersch, Limin Wang, John F. McDonald, Mark P. Styczynski
Software Mentions: 1
Published: almost 10 years ago
10.1186/s12894-019-0506-0
Relationship between alterations of urinary microbiota and cultured negative lower urinary tract symptoms in female type 2 diabetes patients
Cited by: 12
Author(s): Jiawei Chen, Jie Zhao, Ying Cao, Guihao Zhang, Chen Yang, Jialei Zhong, Weina Huang, Jiayi Zeng, Peng Wu
Software Mentions: 1
Published: over 5 years ago
10.1186/1746-6148-8-217
Investigation of strategies for the introduction and transportation of replacement gilts on southern Ontario sow farms
Cited by: 7
Author(s): K. Bottoms, Zvonimir Poljak, Cate Dewey, Rob Deardon, Derald Holtkamp, Robert Friendship
Software Mentions: 1
Published: almost 13 years ago
10.1186/s12917-018-1389-0
The effects of type I collagenase on the degelification of chimpanzee (Pan troglodytes) semen plug and sperm quality
Cited by: 7
Author(s): Jing Yu, Yu-Hua Lai, Tse-En Wang, Yu-Syuan Wei, Ya-Hui Chang, Sheng-Hsiang Li, Shih-Chien Chin, Radhika Joshi, Hui‐Wen Chang, Pu-Sheng Tsai
Software Mentions: 1
Published: over 6 years ago
10.1186/s12610-016-0035-6
Is intracouple assisted reproductive technology an option for men with large-headed spermatozoa? A literature review and a decision guide proposal
Cited by: 6
Author(s): Bruno Guthauser, Xavier Pollet-Villard, Florence Boitrelle, François Vialard
Software Mentions: 1
Published: over 8 years ago
10.1186/s12610-021-00140-w
Male cancer patient sperm cryopreservation for fertility preservation: 10-year monocentric experience
Cited by: 6
Author(s): Xiao Liu, Bo Liu, Shasha Li, Xian Yang, Wenrui Zhao, Bin Zhou, Xiao Xiao, Li Wang, Xiongwei Zhu, Bizhen Shu, Min Jiang, Fuping Li
Software Mentions: 1
Published: about 3 years ago
10.3762/bjnano.5.108
Growth and characterization of CNT–TiO<sub>2</sub> heterostructures
Cited by: 26
Author(s): Yucheng Zhang, Ivo Utke, Johann Michler, Gabriele Ilari, Marta D. Rossell, Rolf Erni
Software Mentions: 1
Published: over 10 years ago
10.1016/j.bbrep.2020.100768
Neuroplastinβ-mediated upregulation of solute carrier family 22 member 18 antisense (SLC22A18AS) plays a crucial role in the epithelial-mesenchymal transition, leading to lung cancer cells' enhanced motility
Cited by: 3
Author(s): Karolina Bajkowska, I Wayan Sumardika, Nahoko Tomonobu, Youyi Chen, Ken Yamamoto, Rie Kinoshita, Hitoshi Murata, Ni Luh Gede Yoni Komalasari, Fan Jiang, Akira Yamauchi, I Made Winarsa Ruma, Carlos Ichiro Kasano-Camones, Yusuke Inoue, Masakiyo Sakaguchi
Software Mentions: 1
Published: over 4 years ago
10.1016/j.bbrep.2020.100793
The influence of polystyrene nanoparticles on the fractal kinetics of lactate dehydrogenase
Cited by: 4
Author(s): J. L. Auclair, François Gagné
Software Mentions: 1
Published: about 4 years ago
10.1093/bioinformatics/btv473
OVA: integrating molecular and physical phenotype data from multiple biomedical domain ontologies with variant filtering for enhanced variant prioritization
Cited by: 23
Author(s): Agne Antanaviciute, Christopher M. Watson, Sally M. Harrison, Carolina Lascelles, Laura A. Crinnion, Alexander F. Markham, David T. Bonthron, Ian Carr
Software Mentions: 1
Published: over 9 years ago
10.1093/bioinformatics/btaa813
FBA reveals guanylate kinase as a potential target for antiviral therapies against SARS-CoV-2
Cited by: 34
Author(s): Alina Renz, Lina Widerspick, Andreas Dräger
Software Mentions: 1
Published: almost 4 years ago
10.1155/2020/2901439
Dynamic and Static Nature of Br4σ(4c–6e) and Se2Br5σ(7c–10e) in the Selenanthrene System and Related Species Elucidated by QTAIM Dual Functional Analysis with QC Calculations
Cited by: 1
Author(s): Satoko Hayashi, Taro Nishide, Warô Nakanishi
Software Mentions: 1
Published: over 4 years ago
10.1098/rsbl.2018.0367
The dynamic role of the ilio-sacral joint in jumping frogs
Cited by: 8
Author(s): Christopher T. Richards, Enrico A. Eberhard, Amber J. Collings
Software Mentions: 1
Published: about 6 years ago
10.1242/bio.056432
Biophysical and biochemical properties of Deup1 self-assemblies: a potential driver for deuterosome formation during multiciliogenesis
Cited by: 6
Author(s): Shohei Yamamoto, Ryoichi Yabuki, Daiju Kitagawa
Software Mentions: 1
Published: over 3 years ago
10.1186/s13293-014-0011-9
Sexually dimorphic characteristics of the small intestine and colon of prepubescent C57BL/6 mice
Cited by: 58
Author(s): Wilma T. Steegenga, Mona Mischke, Carolien Lute, Mark V. Boekschoten, Maurien Pruis, Ágnes Lendvai, Henkjan J. Verkade, Jos Boekhorst, Harro M. Timmerman, Torsten Plösch, Michael Müller
Software Mentions: 1
Published: about 10 years ago
10.1155/2015/898592
The Plant Growth-Promoting Bacteria<i>Azospirillum amazonense</i>: Genomic Versatility and Phytohormone Pathway
Cited by: 16
Author(s): Ricardo Cecagno, Tiago Ebert Fritsch, Irene Silveira Schrank
Software Mentions: 1
Published: almost 10 years ago
10.1155/2015/515606
Effects of Sucroferric Oxyhydroxide Compared to Lanthanum Carbonate and Sevelamer Carbonate on Phosphate Homeostasis and Vascular Calcifications in a Rat Model of Chronic Kidney Failure
Cited by: 22
Author(s): Olivier Phan, Marc Maillard, Hartmut H. Malluche, Jean-Christophe Stehle, Felix Funk, Michel Burnier
Software Mentions: 1
Published: almost 10 years ago
10.1155/2014/594350
Identification of MicroRNA as Sepsis Biomarker Based on miRNAs Regulatory Network Analysis
Cited by: 42
Author(s): Jie Huang, Zhandong Sun, Wenying Yan, Yujie Zhu, Yuxin Lin, Jiajai Chen, Bairong Shen, Jian Wang
Software Mentions: 1
Published: almost 11 years ago
10.1155/2018/7929104
Epithelial-Mesenchymal Transition during Metastasis of HPV-Negative Pharyngeal Squamous Cell Carcinoma
Cited by: 10
Author(s): Friedrich Ihler, Ronja Gratz, Hendrik A. Wolff, Bernhard G. Weiss, Mattis Bertlich, Julia Kitz, Gabriela Salinas, Margret Rave-Fränk
Software Mentions: 1
Published: almost 7 years ago
10.1155/2015/408169
NOD-Like Receptor Signaling in Cholesteatoma
Cited by: 15
Author(s): Anke Leichtle, Christin Klenke, Jörg Ebmeyer, Markus Georg Daerr, Karl‐Ludwig Bruchhage, A Hoffmann, Allen F. Ryan, Barbara Wollenberg, Holger Sudhoff
Software Mentions: 1
Published: almost 10 years ago
10.1155/2015/598721
Mammalian Cell Culture Process for Monoclonal Antibody Production: Nonlinear Modelling and Parameter Estimation
Cited by: 23
Author(s): Dan Selişteanu, Dorin Şendrescu, Vlad Alexandru Georgeanu, Monica Roman
Software Mentions: 1
Published: almost 10 years ago
10.1155/2020/2868564
Strongyloidiasis in Africa: Systematic Review and Meta-Analysis on Prevalence, Diagnostic Methods, and Study Settings
Cited by: 4
Author(s): Tadesse Hailu, Endalkachew Nibret, Arancha Amor, Abaineh Munshea
Software Mentions: 1
Published: about 4 years ago
10.1155/2018/8985718
In Silico Knockout Screening of<i> Plasmodium falciparum</i> Reactions and Prediction of Novel Essential Reactions by Analysing the Metabolic Network
Cited by: 8
Author(s): Jelili Oyelade, Itunuoluwa Isewon, Efosa Uwoghiren, Olufemi Aromolaran, O. O. Oladipupo
Software Mentions: 1
Published: almost 7 years ago
10.1155/2017/1838072
Coliform Bacteria for Bioremediation of Waste Hydrocarbons
Cited by: 15
Author(s): Majida Khanafer, H. Al-Awadhi, S. S. Radwan
Software Mentions: 1
Published: almost 8 years ago
10.1155/2020/7239895
Mir-141-3p Regulates Apoptosis and Mitochondrial Membrane Potential via Targeting Sirtuin1 in a 1-Methyl-4-Phenylpyridinium in vitro Model of Parkinson’s Disease
Cited by: 13
Author(s): Yue Zheng, Dong Li, Na Liu, Xiaoguang Luo, He Zhou
Software Mentions: 1
Published: about 4 years ago
10.1155/2016/1785201
Mitochondria Biogenesis and Bioenergetics Gene Profiles in Isogenic Prostate Cells with Different Malignant Phenotypes
Cited by: 7
Author(s): Tanya C. Burch, Johng S. Rhim, Julius O. Nyalwidhe
Software Mentions: 1
Published: almost 9 years ago
10.3390/biomedicines8110500
SEZ6L2 Is an Important Regulator of Drug-Resistant Cells and Tumor Spheroid Cells in Lung Adenocarcinoma
Cited by: 7
Author(s): Jang Seok Lee, Hee Yeon Kim, Bomyi Won, Sang Won Kang, Yong Nyun Kim, Hyonchol Jang
Software Mentions: 1
Published: about 4 years ago
10.3390/biomedicines9020096
Cell Proliferation Is Strongly Associated with the Treatment Conditions of an ER Stress Inducer New Anti-Melanoma Drug in Melanoma Cell Lines
Cited by: 5
Author(s): István Szász, Viktória Koroknai, Vikas Patel, Tibor Hajdú, Tímea Kiss, Róza Ádány, Margit Balázs
Software Mentions: 1
Published: almost 4 years ago
10.3390/biomedicines9020174
The Role of Biomarkers in Adrenocortical Carcinoma: A Review of Current Evidence and Future Perspectives
Cited by: 18
Author(s): Maja Mizdrak, Tina Tičinović Kurir, Joško Božić
Software Mentions: 1
Published: almost 4 years ago
10.3390/biomimetics5020018
Biomimicry for Regenerative Built Environments: Mapping Design Strategies for Producing Ecosystem Services
Cited by: 27
Author(s): Maibritt Pedersen Zari, Katharina Hecht
Software Mentions: 1
Published: over 4 years ago
10.3390/biom10050680
In Silico Analysis of a Highly Mutated Gene in Cancer Provides Insight into Abnormal mRNA Splicing: Splicing Factor 3B Subunit 1K700E Mutant
Cited by: 6
Author(s): Asmaa Samy, Barış E. Süzek, Mehmet Kemal Özdemir, Özge Şensoy
Software Mentions: 1
Published: over 4 years ago
10.3390/biom11010114
The Influence of Melatonin and Light on VEGF Secretion in Primary RPE Cells
Cited by: 11
Author(s): Alexa Klettner, Miriam Kampers, Daniela Töbelmann, Johann Roider, Manuela Dittmar
Software Mentions: 1
Published: almost 4 years ago
10.3390/biom10010048
Engineering Extracellular Vesicles as Nanotherapeutics for Regenerative Medicine
Cited by: 66
Author(s): Lalithasri Ramasubramanian, Priyadarsini Kumar, Aijun Wang
Software Mentions: 1
Published: almost 5 years ago
10.3390/biom10091311
Determining the Molecular Background of Endometrial Receptivity in Adenomyosis
Cited by: 11
Author(s): Erika Prašnikar, Tanja Kunej, Jure Knez, Katja Repnik, Uroš Potočnik, Borut Kovačič
Software Mentions: 1
Published: about 4 years ago
10.3390/biom9100542
Monosodium Glutamate (MSG) Renders Alkalinizing Properties and Its Urinary Metabolic Markers of MSG Consumption in Rats
Cited by: 6
Author(s): Kanokwan Nahok, Jia V. Li, Jutarop Phetcharaburanin, Hasina Abdul, Chaisiri Wongkham, Raynoo Thanan, Atit Silsirivanit, Sirirat Anutrakulchai, Carlo Selmi, Ubon Cha’on
Software Mentions: 1
Published: about 5 years ago
10.1042/BSR20200538
Profiles of immune infiltration and its relevance to survival outcome in meningiomas
Cited by: 5
Author(s): Xiao Chen, Fang Tian, Peng Lun, Yali Feng
Software Mentions: 1
Published: over 4 years ago
10.1042/BSR20203944
An epithelial–mesenchymal transition-related long noncoding RNA signature correlates with the prognosis and progression in patients with bladder cancer
Cited by: 32
Author(s): Hang Tong, Tinghao Li, Shun Gao, Hubin Yin, Honghao Cao, Weiyang He
Software Mentions: 1
Published: almost 4 years ago
10.1186/s13068-019-1565-x
Discovery and implementation of a novel pathway for n-butanol production via 2-oxoglutarate
Cited by: 12
Author(s): Sofia Ferreira, Rui Pereira, Filipe Liu, Paulo Vilaça, Isabel Rocha
Software Mentions: 1
Published: about 5 years ago
10.1186/s13068-021-01909-x
High oil accumulation in tuber of yellow nutsedge compared to purple nutsedge is associated with more abundant expression of genes involved in fatty acid synthesis and triacylglycerol storage
Cited by: 6
Author(s): Hongying Ji, Dantong Liu, Zhenle Yang
Software Mentions: 1
Published: over 3 years ago
10.1186/s13068-015-0345-5
Oleaginous yeast platform for producing biofuels via co-solvent hydrothermal liquefaction
Cited by: 49
Author(s): Umakanta Jena, Alex T. McCurdy, Andrew Warren, Hailey M. Summers, Rhesa N. Ledbetter, S. Kent Hoekman, Lance C. Seefeldt, Jason C. Quinn
Software Mentions: 1
Published: about 9 years ago
10.1186/s13068-017-0838-5
A design–build–test cycle using modeling and experiments reveals interdependencies between upper glycolysis and xylose uptake in recombinant S. cerevisiae and improves predictive capabilities of large-scale kinetic models
Cited by: 35
Author(s): Ljubiša Mišković, Susanne Alff-Tuomala, Keng Cher Soh, Dorothee Barth, Laura Salusjärvi, Juha-Pekka Pitkänen, Laura Ruohonen, Merja Penttilä, Vassily Hatzimanikatis
Software Mentions: 1
Published: over 7 years ago
10.1186/s13068-017-0950-6
An accurate description of Aspergillus niger organic acid batch fermentation through dynamic metabolic modelling
Cited by: 28
Author(s): Daniel J. Upton, Simon J. McQueen‐Mason, A. Jamie Wood
Software Mentions: 1
Published: about 7 years ago
10.1038/s41416-020-0763-4
Genetic heterogeneity and evolutionary history of high-grade ovarian carcinoma and matched distant metastases
Cited by: 50
Author(s): Tariq Masoodi, Sarah Siraj, Abdul K. Siraj, Saud Azam, Zeeshan Qadri, Sandeep Kumar Parvathareddy, Asma Tulbah, Fouad Al‐Dayel, Hamed Alhusaini, Osama Alomar, Ismail A. Al‐Badawi, Fowzan S. Alkuraya, Khawla S. Al‐Kuraya
Software Mentions: 1
Published: over 4 years ago
10.1038/s41416-020-0773-2
miR-27a is a master regulator of metabolic reprogramming and chemoresistance in colorectal cancer
Cited by: 34
Author(s): Giovannina Barisciano, Tommaso Colangelo, Valeria Rosato, Livio Muccillo, Maria Letizia Taddei, Luigi Ippolito, Paola Chiarugi, Mario Galgani, Sara Bruzzaniti, Giuseppe Matarese, Matteo Fassan, Marco Agostini, Francesca Bergamo, Salvatore Pucciarelli, Annalucia Carbone, Gianluigi Mazzoccoli, Vittorio Colantuoni, Fabrizio Bianchi, Lina Sabatino
Software Mentions: 1
Published: over 4 years ago
10.1038/s41416-018-0286-4
pRAD50: a novel and clinically applicable pharmacodynamic biomarker of both ATM and ATR inhibition identified using mass spectrometry and immunohistochemistry
Cited by: 25
Author(s): Gemma N. Jones, Claire Rooney, Nicola Griffin, Martine P. Roudier, Lucy A. Young, Antonio Garcia-Trinidad, Gareth Hughes, Jeffrey R. Whiteaker, Zena Wilson, Rajesh Odedra, Lei Zhao, Richard G. Ivey, William J. Howat, Elizabeth A. Harrington, J. Carl Barrett, Antonio Ramos-Montoya, Alan Lau, Amanda G. Paulovich, Elaine Cadogan, Andrew J. Pierce
Software Mentions: 1
Published: about 6 years ago
10.1111/bjc.12244
Preventing relapse with personalized smart‐messaging after cognitive behavioural therapy: A proof‐of‐concept evaluation
Cited by: 8
Author(s): Sam Malins, Sanchia Biswas, Shireen Patel, Jo Levene, Nima Moghaddam, Richard Morriss
Software Mentions: 1
Published: almost 5 years ago
10.1017/S0007114520000045
Interaction of recommended levels of physical activity and protein intake is associated with greater physical function and lower fat mass in older women: Kuopio Osteoporosis Risk Factor- (OSTPRE) and Fracture-Prevention Study
Cited by: 5
Author(s): Samu Sjöblom, Joonas Sirola, Toni Rikkonen, Arja T. Erkkilä, Heikki Kröger, Sarang Latif Qazi, Masoud Isanejad
Software Mentions: 1
Published: almost 5 years ago
10.1002/brb3.1912
Fat compartments in patients with depression: A meta‐analysis
Cited by: 8
Author(s): Alisa Susann Cosan, Julietta Ursula Schweiger, Kai G. Kahl, Bettina Hamann, Michael Deuschle, Ulrich Schweiger, Anna Lisa Westermair
Software Mentions: 1
Published: about 4 years ago
10.3390/brainsci11020167
Individual Alpha Peak Frequency, an Important Biomarker for Live Z-Score Training Neurofeedback in Adolescents with Learning Disabilities
Cited by: 19
Author(s): Rubén Pérez-Elvira, Javier Oltra-Cucarella, José Antonio Carrobles, Minodora Teodoru, Ciprian Bacilă, Bogdan Neamțu
Software Mentions: 1
Published: almost 4 years ago
10.1186/bcr2896
Epithelial to mesenchymal transition markers expressed in circulating tumour cells of early and metastatic breast cancer patients
Cited by: 324
Author(s): Galatea Kallergi, Maria A. Papadaki, Eleni Politaki, Dimitris Mavroudis, Vassilis Georgoulias, Sofia Agelaki
Software Mentions: 1
Published: over 13 years ago
10.1186/bcr3428
Serum microRNA expression as an early marker for breast cancer risk in prospectively collected samples from the Sister Study cohort
Cited by: 96
Author(s): Ashley C. Godfrey, Zongli Xu, Clarice R. Weinberg, Robert C. Getts, Paul A. Wade, Lisa A. DeRoo, Dale P. Sandler, Jack A. Taylor
Software Mentions: 1
Published: over 11 years ago
10.1007/s10549-017-4195-7
A comparison of the molecular subtypes of triple-negative breast cancer among non-Asian and Taiwanese women
Cited by: 20
Author(s): Ling‐Ming Tseng, Jen‐Hwey Chiu, Chunyu Liu, Yi‐Fang Tsai, Yunlin Wang, Chu‐Wen Yang, Yi‐Ming Shyr
Software Mentions: 1
Published: over 7 years ago
10.1093/bfgp/elt017
Functional genomics of Plasmodium falciparum using metabolic modelling and analysis
Cited by: 16
Author(s): Stepan Tymoshenko, Rebecca Oppenheim, Dominique Soldati‐Favre, Vassily Hatzimanikatis
Software Mentions: 1
Published: over 11 years ago
10.1186/s41038-019-0156-1
Severe burn injury alters intestinal microbiota composition and impairs intestinal barrier in mice
Cited by: 27
Author(s): Yang Feng, Yalan Huang, Yu Wang, Pei Wang, Fengjun Wang
Software Mentions: 1
Published: almost 6 years ago
10.1007/s00223-015-0081-7
Non-invasive Assessment of Lower Limb Geometry and Strength Using Hip Structural Analysis and Peripheral Quantitative Computed Tomography: A Population-Based Comparison
Cited by: 8
Author(s): Anna Litwic, Michael Clynes, Hayley Denison, Karen Jameson, M H Edwards, A A Sayer, P Taylor, Cyrus Cooper, Elaine Dennison
Software Mentions: 1
Published: about 9 years ago
10.20892/j.issn.2095-3941.2019.0164
Downregulation of SNRPG induces cell cycle arrest and sensitizes human glioblastoma cells to temozolomide by targeting Myc through a p53-dependent signaling pathway
Cited by: 30
Author(s): Yu‐Long Lan, Jiacheng Lou, Jiliang Hu, Zhikuan Yu, Wen Lyu, Bo Zhang
Software Mentions: 1
Published: almost 5 years ago
10.1186/s12935-020-01600-5
ZBTB7A, a potential biomarker for prognosis and immune infiltrates, inhibits progression of endometrial cancer based on bioinformatics analysis and experiments
Cited by: 10
Author(s): Rong Geng, Yuhua Zheng, Donghua H. Zhou, Qingdong Li, Ruiman Li, Xiaoling Guo
Software Mentions: 1
Published: about 4 years ago
10.1186/s12935-020-1136-z
TRIP6 enhances stemness property of breast cancer cells through activation of Wnt/β-catenin
Cited by: 13
Author(s): Xiaohui Zhao, Chao Jiang, Rui Xu, Qingnan Liu, Guanglin Liu, Yan Zhang
Software Mentions: 1
Published: almost 5 years ago