pypi: analysis | Projects | Ecosyste.ms: Papers

10.1038/s41598-018-26116-x

PCR-Stop analysis as a new tool for qPCR assay validation
Cited by: 5
Author(s): Anna Kristina Witte, Patrick Mester, Susanne Fister, Beate Süß, Martin Wagner, Peter Rossmanith
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-017-14296-x

Gelatinizing oil in water and its removal via bacteria inhabiting the gels
Cited by: 3
Author(s): S. S. Radwan, Dina M. Al-Mailem, Mayada K. Kansour
Software Mentions: 1
Published: about 7 years ago

10.1007/s13238-015-0242-5

Structural dynamics of the yeast Shwachman-Diamond syndrome protein (Sdo1) on the ribosome and its implication in the 60S subunit maturation
Cited by: 8
Author(s): Chunyang Ma, Kaige Yan, Dan Tan, Ningning Li, Yixiao Zhang, Yi Yuan, Zhifei Li, Meng‐Qiu Dong, Jianlin Lei, Ning Gao
Software Mentions: 1
Published: almost 9 years ago

10.1007/s13238-018-0591-y

Single senescent cell sequencing reveals heterogeneity in senescent cells induced by telomere erosion
Cited by: 27
Author(s): Herman Tang, Anke Geng, Tengjiao Zhang, Chen Wang, Ying Jiang, Zhiyong Mao
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0009913

The Role of NF-κB and H3K27me3 Demethylase, Jmjd3, on the Anthrax Lethal Toxin Tolerance of RAW 264.7 Cells
Cited by: 32
Author(s): Nando Dulal Das, Kyoung Hwa Jung, Young Gyu Chai
Software Mentions: 1
Published: over 14 years ago

10.1002/pmic.200900412

Pathway analysis of dilated cardiomyopathy using global proteomic profiling and enrichment maps
Cited by: 62
Author(s): Ruth Isserlin, Daniele Merico, Rasoul Alikhani-Koupaei, Anthony O. Gramolini, Gary D. Bader, Andrew Emili
Software Mentions: 1
Published: over 14 years ago

10.1016/j.psychres.2020.113243

Refining the resolution of craniofacial dysmorphology in bipolar disorder as an index of brain dysmorphogenesis
Cited by: 0
Author(s): Stanislav Katina, Brendan D. Kelly, Mario A. Rojas, Federico M. Sukno, Aoibhinn McDermott, Robin J. Hennessy, Abbie Lane, Paul F. Whelan, Adrian Bowman, John L. Waddington
Software Mentions: 1
Published: about 4 years ago

10.1017/S0033291719003374

Shared alterations in resting-state brain connectivity in adults with attention-deficit/hyperactivity disorder and their unaffected first-degree relatives
Cited by: 4
Author(s): Valentino Antonio Pironti, Deniz Vatansever, Barbara J. Sahakian
Software Mentions: 1
Published: almost 5 years ago

10.1007/s11136-015-1154-9

Interaction between the Kansas City Cardiomyopathy Questionnaire and the Pocock’s clinical score in predicting heart failure outcomes
Cited by: 2
Author(s): Kiswendsida Sawadogo, Jérôme Ambroise, Steven Vercauteren, Marc Castadot, Michel Vanhalewyn, Jacques Col, Annie Robert
Software Mentions: 1
Published: about 9 years ago

10.1098/rsos.181282

Effect of components on the curing of glycidyl azide polymer spherical propellant through rheological method
Cited by: 4
Author(s): Lihua He, Wei He, Zhongliang Ma
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0178819

Bioelectrical impedance vector analysis (BIVA) for measuring the hydration status in young elite synchronized swimmers
Cited by: 40
Author(s): Marta Carrasco-Marginet, Jorge Castizo-Olier, Lara Rodríguez-Zamora, Xavier Iglesias, Ferrán A. Rodríguez, Diego Chaverri, Daniel Brotons, Alfredo Irurtia
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0211373

Homology analysis of malware based on ensemble learning and multifeatures
Cited by: 11
Author(s): Di Xue, Jingmei Li, Weifei Wu, Qiao Tian, J. X. Wang
Software Mentions: 1
Published: about 5 years ago

10.1098/rsos.202104

Temporal discounting mediates the relationship between socio-economic status and social trust
Cited by: 2
Author(s): Léonard Guillou, Aurore Grandin, Coralie Chevallier
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0106735

Coordinate Based Meta-Analysis of Functional Neuroimaging Data Using Activation Likelihood Estimation; Full Width Half Max and Group Comparisons
Cited by: 18
Author(s): Christopher R. Tench, Radu Tanasescu, Dorothee P. Auer, William J. Cottam, Cris S. Constantinescu
Software Mentions: 1
Published: about 10 years ago

10.1038/s41598-017-14770-6

New insight for pharmacogenomics studies from the transcriptional analysis of two large-scale cancer cell line panels
Cited by: 8
Author(s): Benjamin Sadacca, Anne-Sophie Hamy, Cécile Laurent, Pierre Gestraud, Hélène Bonsang-Kitzis, Alice Pinheiro, J. Abecassis, Pierre Neuvial, Fabien Reyal
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0196667

Epiisopilosine alkaloid has activity against Schistosoma mansoni in mice without acute toxicity
Cited by: 30
Author(s): Maria Adelaide Guimarães, Rosimeire Nunes de Oliveira, Rafael Menck de Almeida, Ana Carolina Mafud, Ana L V Sarkis, Rayane Ganassin, Marcos Da Silva, Daniel B. Roquini, Leiz Maria Costa Véras, Tânia Cristina Higashi Sawada, Cristina Dislich Röpke, Luís Alexandre Muehlmann, Graziella Anselmo Joanitti, Selma Aparecida Souza Kückelhaus, Silmara Marques Allegretti, Yvonne P. Mascarenhas, Josué de Moraes, José Roberto S. A. Leite
Software Mentions: 1
Published: over 6 years ago

10.1186/1477-7827-6-9

Potential factors affecting semen quality in the Asian elephant (Elephas maximus)
Cited by: 42
Author(s): Nikorn Thongtip, Jumnian Saikhun, Sittidet Mahasawangkul, Kornchai Kornkaewrat, Pornsawan Pongsopavijitr, Nucharin Songsasen, Anuchai Pinyopummin
Software Mentions: 1
Published: over 16 years ago

10.1186/1477-7827-9-107

Comparative gene expression profiling of placentas from patients with severe pre-eclampsia and unexplained fetal growth restriction
Cited by: 119
Author(s): Haruki Nishizawa, Sayuri Ota, Manami Suzuki, Takema Kato, Takao Sekiya, Hiroki Kurahashi, Yasuhiro Udagawa
Software Mentions: 1
Published: almost 14 years ago

10.1186/1477-7827-12-53

Endometrial beta3 Integrin profile reflects endometrial receptivity defects in women with unexplained recurrent pregnancy loss
Cited by: 55
Author(s): Ariane Germeyer, Ricardo Francalacci Savaris, Julia Jauckus, Bruce A. Lessey
Software Mentions: 1
Published: almost 11 years ago

10.21203/rs.3.rs-33390/v1

SARS-CoV2 drives JAK1/2-dependent local and systemic complement hyper-activation
Cited by: 21
Author(s): Bingyu Yan, Tilo Freiwald, Daniel Chauss, Luopin Wang, Erin E. West, Jack Bibby, Matthew R. Olson, Shahram Kordasti, Didier Portilla, Arian Laurence, Michail S Lionakis, Claudia Kemper, Behdad Afzali, Majid Kazemian
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0099380

Evaluation of Bias-Variance Trade-Off for Commonly Used Post-Summarizing Normalization Procedures in Large-Scale Gene Expression Studies
Cited by: 14
Author(s): Xing Qiu, Rui Hu, Zhixin Wu
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0165899

Dynamical Model of Drug Accumulation in Bacteria: Sensitivity Analysis and Experimentally Testable Predictions
Cited by: 8
Author(s): Vesselinova Neda, Boian S. Alexandrov, Michael E. Wall
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-017-18456-x

Enzymes of the one-carbon folate metabolism as anticancer targets predicted by survival rate analysis
Cited by: 32
Author(s): Junichi Koseki, Masamitsu Konno, Ayumu Asai, Hugh Colvin, Kôichi Kikuchi, Naohiro Nishida, Daisuke Sakai, Toshihiro Kudo, Taroh Satoh, Yuichiro Doki, Masaki Mori, Hideshi Ishii
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0169253

Multiband multi-echo imaging of simultaneous oxygenation and flow timeseries for resting state connectivity
Cited by: 22
Author(s): Alexander D. Cohen, Andrew S. Nencka, R. Marc Lebel, Yan Wang
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0229458

How to improve users’ intentions to continued usage of shared bicycles: A mixed method approach
Cited by: 12
Author(s): Zhan-You Wang, Demin Han, Yaopei Zhao
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0167634

K-shuff: A Novel Algorithm for Characterizing Structural and Compositional Diversity in Gene Libraries
Cited by: 7
Author(s): Kamlesh Jangid, Ming‐Hung Kao, Aishwarya Lahamge, Mark A. Williams, Stephen L. Rathbun, William B. Whitman
Software Mentions: 1
Published: almost 8 years ago

10.1186/s12931-019-1165-0

Inhibition of lung cancer cells and Ras/Raf/MEK/ERK signal transduction by ectonucleoside triphosphate phosphohydrolase-7 (ENTPD7)
Cited by: 6
Author(s): Zhongwei Wen, Rongfang Jiang, Ying Huang, Zhineng Wen, Rui Dong, Xiaoxiao Liao, Zhougui Ling
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0209652

Transcriptomic and proteomic host response to Aspergillus fumigatus conidia in an air-liquid interface model of human bronchial epithelium
Cited by: 22
Author(s): Amreen Toor, Luka Culibrk, Gurpreet K. Singhera, Kyung‐Mee Moon, Anna Prudova, Leonard J. Foster, Margo M. Moore, Delbert R. Dorscheid, Scott J. Tebbutt
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12931-020-01489-8

Azithromycin ameliorates sulfur dioxide-induced airway epithelial damage and inflammatory responses
Cited by: 13
Author(s): Jon Pétur Joelsson, Jennifer A. Kricker, Ari Jón Arason, Snaevar Sigurðsson, Bryndís Valdimarsdóttir, Fridrik Runar Gardarsson, Clive Page, Fredrik Lehmann, Thorarinn Gudjonsson, Sævar Ingþórsson
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pone.0179758

Endothelial angiogenesis is directed by RUNX1T1-regulated VEGFA, BMP4 and TGF-β2 expression
Cited by: 21
Author(s): Ko Hsun Liao, Shing Jyh Chang, Hsin Chuan Chang, Chen Li Chien, Tsung Hui Huang, Te Chia Feng, Wen Wei Lin, Chuan Chi Shih, Muh Hwa Yang, Shung Haur Yang, Chi Lin, Wei Lun Hwang, Oscar K. Lee
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0073230

A Helicopter Perspective on TB Biomarkers: Pathway and Process Based Analysis of Gene Expression Data Provides New Insight into TB Pathogenesis
Cited by: 84
Author(s): Simone A. Joosten, Helen A. Fletcher, Tom H. M. Ottenhoff
Software Mentions: 1
Published: about 11 years ago

10.1186/s12977-016-0322-5

Mechanistic differences between HIV-1 and SIV nucleocapsid proteins and cross-species HIV-1 genomic RNA recognition
Cited by: 13
Author(s): Klara Post, Erik D. Olson, M. Nabuan Naufer, Robert J. Gorelick, Ioulia Rouzina, Mark C. Williams, Karin Musier‐Forsyth, Joseph Levin
Software Mentions: 1
Published: almost 8 years ago

10.1126/sciadv.aap9714

Phosphorylation decelerates conformational dynamics in bacterial translation elongation factors
Cited by: 30
Author(s): Ariel Talavera, Jelle Hendrix, Wim Versées, Dukas Jurėnas, Katleen Van Nerom, Niels Vandenberk, Ranjan K. Singh, Albert Konijnenberg, Steven De Gieter, Daniel Castro-Roa, Anders Barth, Henri De Greve, Frank Sobott, Johan Hofkens, Nikolay Zenkin, Remy Loris, Abel García-Pino
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0166422

Gasdermin C Is Upregulated by Inactivation of Transforming Growth Factor β Receptor Type II in the Presence of Mutated Apc, Promoting Colorectal Cancer Proliferation
Cited by: 141
Author(s): Masashi Miguchi, Takao Hinoi, Manabu Shimomura, Tomohiko Adachi, Yasufumi Saito, Hiroaki Niitsu, Mitsugu Kochi, Haruki Sada, Yusuke Sotomaru, Tsuneo Ikenoue, Kunitoshi Shigeyasu, Kohji Tanakaya, Yasuhiko Kitadai, Kazuhiro Sentani, Naohide Oue, Wataru Yasui, Hideki Ohdan
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-018-19695-2

Validation and Comparison of a Model of the Effect of Sea-Level Rise on Coastal Wetlands
Cited by: 45
Author(s): Laura A. Mogensen, Kerrylee Rogers
Software Mentions: 1
Published: almost 7 years ago

10.1038/srep03540

Early urban impact on Mediterranean coastal environments
Cited by: 44
Author(s): David Kaniewski, Elise Van Campo, Christophe Morhange, Joël Guiot, Dov Zviely, Idan Shaked, Thierry Otto, Michal Artzy
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0028206

Structural Position Correlation Analysis (SPCA) for Protein Family
Cited by: 1
Author(s): Qiang Du, Meng Ju, Chenghua Wang, Si-Yu Long, Ribo Huang
Software Mentions: 1
Published: almost 13 years ago

10.1371/journal.pone.0146931

A Novel High Content Imaging-Based Screen Identifies the Anti-Helminthic Niclosamide as an Inhibitor of Lysosome Anterograde Trafficking and Prostate Cancer Cell Invasion
Cited by: 28
Author(s): Magdalena L. Circu, Samantha S. Dykes, Jennifer L. Carroll, Kinsey Kelly, Floyd Galiano, Adam H. Greer, James A. Cardelli, Hazem El-Osta
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0126759

A Systematic Review and Meta-Analysis of the Effect of Short Birth Interval on Infant Mortality in Ethiopia
Cited by: 35
Author(s): Abel Fekadu Dadi
Software Mentions: 1
Published: over 9 years ago

10.1038/srep15236

An in vitro assessment of liposomal topotecan simulating metronomic chemotherapy in combination with radiation in tumor-endothelial spheroids
Cited by: 15
Author(s): Amar Jyoti, Kyle D. Fugit, Pallavi Sethi, Ronald C. McGarry, Bradley D. Anderson, Meenakshi Upreti
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0123737

Is Strain Elastography (IO-SE) Sufficient for Characterization of Liver Lesions before Surgical Resection—Or Is Contrast Enhanced Ultrasound (CEUS) Necessary?
Cited by: 9
Author(s): Ernst Michael Jung, Natascha Platz Batista da Silva, Woo Kyung Jung, S. Farkas, Christian Stroszczynski, Janine Rennert
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-018-27881-5

Fibrin Glue-aided, Instant Epicardial Placement Enhances the Efficacy of Mesenchymal Stromal Cell-Based Therapy for Heart Failure
Cited by: 17
Author(s): Kosaku Kobayashi, Yuki Ichihara, Nobuko Tano, Laura Fields, Nilaani Murugesu, Tomoya Ito, Chiho Ikebe, Fiona Lewis, Kenta Yashiro, Yasunori Shintani, Rakesh Uppal, Ken Suzuki
Software Mentions: 1
Published: over 6 years ago

10.1038/srep16945

Increased cytotoxicity and streptolysin O activity in group G streptococcal strains causing invasive tissue infections
Cited by: 27
Author(s): Nikolai Siemens, Bård Reiakvam Kittang, Bhavya Chakrakodi, Oddvar Oppegaard, Linda Johansson, Trond Bruun, Haima Mylvaganam, Mattias Svensson, Steinar Skrede, Anna Norrby‐Teglund
Software Mentions: 1
Published: almost 9 years ago

10.1038/srep20065

Differentially Expressed miRNAs in Hepatocellular Carcinoma Target Genes in the Genetic Information Processing and Metabolism Pathways
Cited by: 51
Author(s): Thomas Thurnherr, Way-Champ Mah, Zhengdeng Lei, Yu Jin, Steven G. Rozen, Caroline Lee
Software Mentions: 1
Published: almost 9 years ago

10.1038/srep20223

Notch-regulated miR-223 targets the aryl hydrocarbon receptor pathway and increases cytokine production in macrophages from rheumatoid arthritis patients
Cited by: 56
Author(s): Jesús Ogando, Manuel Tardáguila, Andrea Díaz-Alderete, Alicia Usategui, Vanessa Miranda-Ramos, Dannys Jorge Martínez-Herrera, Lorena de la Fuente, María J. García-León, María C. Moreno, Sara Silvestre Escudero, Juan D. Cañete, Marı́a L. Toribio, Ildefonso Cases, Alberto Pascual-Montano, José L. Pablos, Santos Mañes
Software Mentions: 1
Published: almost 9 years ago

10.1038/srep24014

Somatic Mutations and Genetic Variants of NOTCH1 in Head and Neck Squamous Cell Carcinoma Occurrence and Development
Cited by: 29
Author(s): Yu Fan Liu, Shang Lun Chiang, Chien Yu Lin, Jui‐Hsing Chang, Chia Min Chung, Albert Min Shan Ko, You Zhe Lin, Chien-Hung Lee, Ka Wo Lee, Mu Kuan Chen, Chun Hung Hua, Ming Hsui Tsai, Yuan Chien Chen, Ying Chin Ko
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0226993

A quantitative engineering study of ecosystem robustness using thermodynamic power cycles as case studies
Cited by: 4
Author(s): Varuneswara Panyam
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pone.0043339

Increased Microglia/Macrophage Gene Expression in a Subset of Adult and Pediatric Astrocytomas
Cited by: 134
Author(s): Jane R. Engler, Aaron E. Robinson, Иван Смирнов, J. Graeme Hodgson, Mitchel S. Berger, Nalin Gupta, C. David James, Annette M. Molinaro, Joanna J. Phillips
Software Mentions: 1
Published: over 12 years ago

10.1038/srep27753

Cbx7 is epigenetically silenced in glioblastoma and inhibits cell migration by targeting YAP/TAZ-dependent transcription
Cited by: 27
Author(s): Zahid Nawaz, Vikas Patil, Anjali Arora, Anupama Hegde, Arimappamagan Arivazhagan, Vani Santosh, Kumaravel Somasundaram
Software Mentions: 1
Published: over 8 years ago

10.1038/srep30864

Nuclear myosin I regulates cell membrane tension
Cited by: 25
Author(s): Tomáš Venit, Alžběta Kalendová, Martin Petr, Rastislav Dzijak, Lukáš Pastorek, Jana Rohožková, Jakub Malohlava, Pavel Hozák
Software Mentions: 1
Published: over 8 years ago

10.1038/srep32397

Curved Beam Computed Tomography based Structural Rigidity Analysis of Bones with Simulated Lytic Defect: A Comparative Study with Finite Element Analysis
Cited by: 14
Author(s): Ramin Oftadeh, Zahra Karimi, Juan C. Villa-Camacho, E. Tanck, Nico Verdonschot, Ruben Goebel, Brian D. Snyder, Hamid Hashemi, Ashkan Vaziri, Ara Nazarian
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-018-21024-6

Functional Variants Identified Efficiently through an Integrated Transcriptome and Epigenome Analysis
Cited by: 9
Author(s): Fengyan Meng, Gang Yuan, Xiurui Zhu, Yiming Zhou, Dong Wang, Yuanbo Guo
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0143184

Work Disability among Employees with Diabetes: Latent Class Analysis of Risk Factors in Three Prospective Cohort Studies
Cited by: 14
Author(s): Marianna Virtanen, Jussi Vahtera, Jenny Head, Rosemary Dray‐Spira, Annaleena Okuloff, Ádám G. Tabák, Marcel Goldberg, Jenni Ervasti, Markus Jokela, Archana Singh‐Manoux, Jaana Pentti, Marie Zins, Mika Kivimäki
Software Mentions: 1
Published: about 9 years ago

10.1038/srep36507

The endotracheal tube microbiome associated with Pseudomonas aeruginosa or Staphylococcus epidermidis
Cited by: 43
Author(s): An Hotterbeekx, Basil Britto Xavier, Kenny Bielen, Christine Lammens, Pieter Moons, Tom Schepens, Margareta Ieven, Philippe G. Jorens, Herman Goossens, Samir Kumar‐Singh, Surbhi Malhotra-Kumar
Software Mentions: 1
Published: about 8 years ago

10.1038/srep36603

Transcriptome assists prognosis of disease severity in respiratory syncytial virus infected infants
Cited by: 30
Author(s): Victor L. Jong, Inge M. L. Ahout, Henk-Jan van den Ham, Jop Jans, Fatiha Zaaraoui-Boutahar, Aldert Zomer, Elles Simonetti, M Bijl, H. Kim Brand, Wilfred F. J. van IJcken, Marien I. de Jonge, Pieter L. A. Fraaij, Ronald de Groot, Albert D. M. E. Osterhaus, Marinus J.C. Eijkemans, Gerben Ferwerda, Arno C. Andeweg
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0240986

Prediction of severity and subtype of fibrosing disease using model informed by inflammation and extracellular matrix gene index
Cited by: 0
Author(s): Amin Cheikhi, Zariel I. Johnson, Dana R. Julian, Sarah Wheeler, Carol Feghali‐Bostwick, Yvette P. Conley, James Lyons‐Weiler, Cecelia C. Yates
Software Mentions: 1
Published: about 4 years ago

10.1038/srep38240

Bordetella pertussis outer membrane vesicle vaccine confers equal efficacy in mice with milder inflammatory responses compared to a whole-cell vaccine
Cited by: 41
Author(s): René H. M. Raeven, Jolanda Brummelman, Jeroen L. A. Pennings, Larissa van der Maas, Wichard Tilstra, Kina Helm, Elly van Riet, Wim Jiskoot, Cécile A. C. M. van, Wanda G. H. Han, Gideon Kersten, Bernard Metz
Software Mentions: 1
Published: almost 8 years ago

10.1038/srep38611

Foxa1 is essential for development and functional integrity of the subthalamic nucleus
Cited by: 16
Author(s): Emanuel Gasser, Helge C. Johannssen, Thomas Rülicke, Hanns Ulrich Zeilhofer, Markus Stoffel
Software Mentions: 1
Published: almost 8 years ago

10.1038/srep39238

Microcystin-Leucine Arginine Causes Cytotoxic Effects in Sertoli Cells Resulting in Reproductive Dysfunction in Male Mice
Cited by: 33
Author(s): Yabing Chen, Yuan Zhou, Jing Wang, Lihui Wang, Xiang Zou, Dongmei Li, Xiaodong Han
Software Mentions: 1
Published: almost 8 years ago

10.1038/srep40257

HCN1 channels reduce the rate of exocytosis from a subset of cortical synaptic terminals
Cited by: 18
Author(s): Zhuo Huang, Gengyu Li, Carolina Aguado, Rafael Luján, Maulik Shah
Software Mentions: 1
Published: almost 8 years ago

10.1038/srep41569

Identifying the Metabolic Differences of a Fast-Growth Phenotype in Synechococcus UTEX 2973
Cited by: 50
Author(s): Thomas Mueller, Justin Ungerer, Himadri B. Pakrasi, Costas D. Maranas
Software Mentions: 1
Published: almost 8 years ago

10.1038/srep43587

Pneumococcal galactose catabolism is controlled by multiple regulators acting on pyruvate formate lyase
Cited by: 30
Author(s): Firas A. Al-Bayati, Hasan Faisal Hussein Kahya, Andreas Damianou, Sulman Shafeeq, Oscar P. Kuipers, Peter W. Andrew, Hasan Yeşilkaya
Software Mentions: 1
Published: over 7 years ago

10.3389/fgene.2018.00320

Bioinformatics Analysis Identifies p53 as a Candidate Prognostic Biomarker for Neuropathic Pain
Cited by: 22
Author(s): Yibo Gao, Na Sun, Lieju Wang, Ying Wu, Longfei Ma, Juncong Hong, Jinxuan Ren, Binhai Zhu, Yu Lu, Min Yan
Software Mentions: 1
Published: about 6 years ago

10.3389/fgene.2020.00847

Systemic Expression Analysis Reveals Prognostic Significance of WIPI3 in Hepatocellular Carcinoma
Cited by: 5
Author(s): Taotao Liang, Qi Shao, Zhichao Deng, Ting Wang, Qiaozhen Kang
Software Mentions: 1
Published: over 4 years ago

10.3389/fgene.2018.00528

Dissecting the Genomic Architecture of Resistance to Eimeria maxima Parasitism in the Chicken
Cited by: 21
Author(s): Kay Boulton, Matthew J. Nolan, Wu Z, Valentina Riggio, Oswald Matika, Kimberley Harman, Paul Hocking, Nat Bumstead, Pat Hesketh, Andrew Archer, Stephen Bishop, Pete Kaiser, Fiona M. Tomley, David Hume, Adrian L. Smith, Damer P. Blake, Androniki Psifidi
Software Mentions: 1
Published: almost 6 years ago

10.3389/fgene.2021.625583

Autophagy-Related Long Non-coding RNA Signature as Indicators for the Prognosis of Uveal Melanoma
Cited by: 10
Author(s): Yi Cui, Zheng Mi, Jing Chen, Nuo Xu
Software Mentions: 1
Published: over 3 years ago

10.3389/fendo.2014.00148

Podocyte Dedifferentiation: A Specialized Process for a Specialized Cell
Cited by: 51
Author(s): Carl J. May, Moin A. Saleem, Gavin I. Welsh
Software Mentions: 1
Published: about 10 years ago

10.1038/srep43765

Gene networks activated by specific patterns of action potentials in dorsal root ganglia neurons
Cited by: 42
Author(s): Philip R. Lee, Jeffrey K. Cohen, Dumitru A. Iacobaş, Sanda Iacobaş, R. Douglas Fields
Software Mentions: 1
Published: over 7 years ago

10.3389/fchem.2018.00314

Brasilianoids A–F, New Meroterpenoids From the Sponge-Associated Fungus Penicillium brasilianum
Cited by: 32
Author(s): Jianping Zhang, Bochuan Yuan, Dong Liu, Shuang Gao, Peter Proksch, Wenhan Lin
Software Mentions: 1
Published: over 6 years ago

10.1038/srep44780

Altered microstructure rather than morphology in the corpus callosum after lower limb amputation
Cited by: 14
Author(s): Zhichao Li, Chuanming Li, Lingzhong Fan, Guangyao Jiang, Jixiang Wu, Tianzi Jiang, Xuntao Yin, Jian Wang
Software Mentions: 1
Published: over 7 years ago

10.3389/fchem.2019.00556

Quantitative Structure Activity Relationship Studies and Molecular Dynamics Simulations of 2-(Aryloxyacetyl)cyclohexane-1,3-Diones Derivatives as 4-Hydroxyphenylpyruvate Dioxygenase Inhibitors
Cited by: 28
Author(s): Ying Fu, Yongxuan Liu, Ke‐Han Yi, Mingqiang Li, Jiazhong Li, Fei Ye
Software Mentions: 1
Published: over 5 years ago

10.3389/fcimb.2017.00238

Translational Rodent Models for Research on Parasitic Protozoa—A Review of Confounders and Possibilities
Cited by: 24
Author(s): Totta Ehret, Francesca Torelli, Christian Klotz, Amy B. Pedersen, Frank Seeber
Software Mentions: 1
Published: over 7 years ago

10.3389/fcell.2021.619396

Comprehensive Analysis of the Clinical and Biological Significances of Endoplasmic Reticulum Stress in Diffuse Gliomas
Cited by: 13
Author(s): Ruoyu Huang, Guanzhang Li, Kuanyu Wang, Zhiliang Wang, Fan Zeng, Huimin Hu, Tao Jiang
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0029804

Functional Relationship between Skull Form and Feeding Mechanics in Sphenodon, and Implications for Diapsid Skull Development
Cited by: 29
Author(s): Neil Curtis, Marc E. H. Jones, Jian Shi, Paul O’Higgins, SE Evans, Michael J. Fagan
Software Mentions: 1
Published: almost 13 years ago

10.1371/journal.pone.0110299

Gene Profiling of Postnatal Mfrprd6 Mutant Eyes Reveals Differential Accumulation of Prss56, Visual Cycle and Phototransduction mRNAs
Cited by: 26
Author(s): Ramani Soundararajan, Won Seok Jung, Timothy M. Stearns, Jeremy R. Charette, Wanda L. Hicks, Gayle B. Collin, Jürgen Κ. Naggert, Mark P. Krebs, Patsy M. Nishina
Software Mentions: 1
Published: about 10 years ago

10.3389/fgene.2021.732432

Comparative Analysis of Genomic and Transcriptome Sequences Reveals Divergent Patterns of Codon Bias in Wheat and Its Ancestor Species
Cited by: 7
Author(s): Chenkang Yang, Qi Zhao, Ying Wang, Jiajia Zhao, Qiao Liao, Bangbang Wu, Suxian Yan, Jun Zheng, Xingwei Zheng
Software Mentions: 1
Published: over 3 years ago

10.3389/fcell.2021.633937

Urothelial Cancer Associated 1 (UCA1) and miR-193 Are Two Non-coding RNAs Involved in Trophoblast Fusion and Placental Diseases
Cited by: 5
Author(s): Clara Apicella, Camino S. M. Ruano, Sébastien Jacques, Géraldine Gascoin, Céline Méhats, Daniel Vaiman, Francisco Miralles
Software Mentions: 1
Published: over 3 years ago

10.3389/fcell.2021.607628

Insights on the Control of Yeast Single-Cell Growth Variability by Members of the Trehalose Phosphate Synthase (TPS) Complex
Cited by: 2
Author(s): Sevan Arabaciyan, Michael Saint-Antoine, Cathy Maugis-Rabusseau, Jean-Marie François, Abhyudai Singh, Jean-Luc Parrou, Jean‐Pascal Capp
Software Mentions: 1
Published: almost 4 years ago

10.3389/fgene.2021.666607

SLC15A4 Serves as a Novel Prognostic Biomarker and Target for Lung Adenocarcinoma
Cited by: 3
Author(s): Hui Huang, Junwei Wang, Shibin Chen, Hongchao He, Yu Shang, Xiaorong Guo, Ge Lou, Jingjing Ji, Mian Guo, Hong Chen, Shan Yu
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-017-00909-y

High Throughput Analysis of Golgi Structure by Imaging Flow Cytometry
Cited by: 21
Author(s): Inbal Wortzel, Gabriela Koifman, Varda Rotter, Rony Seger, Ziv Porat
Software Mentions: 1
Published: over 7 years ago

10.3389/fcell.2019.00145

Monensin Sensitive 1 Regulates Dendritic Arborization in Drosophila by Modulating Endocytic Flux
Cited by: 1
Author(s): Rohit Krishnan Harish, Shweta Tendulkar, Senthilkumar Deivasigamani, Anuradha Ratnaparkhi, Girish S. Ratnaparkhi
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0154834

Feasibility, Reliability and Predictive Value Of In-Ambulance Heart Rate Variability Registration
Cited by: 8
Author(s): Laetitia Yperzeele, Robbert-Jan Van Hooff, Ann De Smedt, Guy Nagels, Ives Hubloue, Jacques De Keyser, Raf Brouns
Software Mentions: 1
Published: over 8 years ago

10.3389/fcell.2019.00187

Coupling Phase Behavior of Fatty Acid Containing Membranes to Membrane Bio-Mechanics
Cited by: 25
Author(s): Arwen I. I. Tyler, Jake L. Greenfield, John M. Seddon, Nicholas J. Brooks, Sowmya Purushothaman
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0026514

The Transcription Factors Snail and Slug Activate the Transforming Growth Factor-Beta Signaling Pathway in Breast Cancer
Cited by: 138
Author(s): Archana Dhasarathy, Dhiral Phadke, Deepak Mav, Ruchir Shah, Paul A. Wade
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0039903

Design Constraints on a Synthetic Metabolism
Cited by: 9
Author(s): Tugce Bilgin, Andreas Wagner
Software Mentions: 1
Published: over 12 years ago

10.1038/s41598-018-22554-9

Prolonged life of human acute hippocampal slices from temporal lobe epilepsy surgery
Cited by: 25
Author(s): Jenny Wickham, N G Brödjegård, Rasmus Vighagen, Lars H. Pinborg, Johan Bengzon, David P. D. Woldbye, Mérab Kokaia, My Andersson
Software Mentions: 1
Published: over 6 years ago

10.3389/fnhum.2013.00794

BrainCAT – a tool for automated and combined functional magnetic resonance imaging and diffusion tensor imaging brain connectivity analysis
Cited by: 13
Author(s): Paulo Marques, José Miguel Soares, Victor Alves, Nuno Sousa
Software Mentions: 1
Published: almost 12 years ago

10.3389/fnhum.2017.00607

Structural Brain Damage and Upper Limb Kinematics in Children with Unilateral Cerebral Palsy
Cited by: 9
Author(s): Lisa Mailleux, Cristina Simon-Martinez, Katrijn Klingels, Ellen Jaspers, Kaat Desloovere, Philippe Demaerel, Simona Fiori, Andrea Guzzetta, Els Ortibus, Hilde Feys
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0142806

SWI/SNF Subunits SMARCA4, SMARCD2 and DPF2 Collaborate in MLL-Rearranged Leukaemia Maintenance
Cited by: 19
Author(s): V. Adam Cruickshank, Patrycja Sroczyńska, Aditya Sankar, Satoru Miyagi, Carsten Friis Rundsten, Jens Vilstrup Johansen, Kristian Helin
Software Mentions: 1
Published: about 9 years ago

10.3389/fnhum.2014.00776

The neural basis of audiomotor entrainment: an ALE meta-analysis
Cited by: 30
Author(s): Léa A. S. Chauvigné, Kevin Gitau, Steven Brown
Software Mentions: 1
Published: about 10 years ago

10.3389/fnhum.2019.00162

Impact of Hunger, Satiety, and Oral Glucose on the Association Between Insulin and Resting-State Human Brain Activity
Cited by: 17
Author(s): Arkan Al-Zubaidi, Marcus Heldmann, Alfred Mertins, Georg Brabant, Janis M. Nolde, Kamila Jauch‐Chara, Thomas F. Münte
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0079195

Systematic Construction of Kinetic Models from Genome-Scale Metabolic Networks
Cited by: 108
Author(s): Natalie J. Stanford, Timo Lubitz, Kieran Smallbone, Edda Klipp, Pedro Mendes, Wolfram Liebermeister
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0073185

Association between Body Water Status and Acute Mountain Sickness
Cited by: 29
Author(s): Hannes Gatterer, Maria Wille, Martin Faulhaber, Henry C. Lukaski, Andreas Melmer, Christoph Ebenbichler, Martin Burtscher
Software Mentions: 1
Published: about 11 years ago

10.3389/fimmu.2015.00342

The Evolution of the Scavenger Receptor Cysteine-Rich Domain of the Class A Scavenger Receptors
Cited by: 30
Author(s): Nicholas V. L. Yap, Fiona Whelan, Dawn M. E. Bowdish, G. Brian Golding
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0148969

Inhibition of Plasminogen Activator Inhibitor-1 Attenuates Transforming Growth Factor-β-Dependent Epithelial Mesenchymal Transition and Differentiation of Fibroblasts to Myofibroblasts
Cited by: 54
Author(s): Keitaro Omori, Noboru Hattori, Tadashi Senoo, Yusuke Takayama, Takeshi Masuda, Toshikatsu Nakashima, Hiroshi Iwamoto, Kazunori Fujitaka, Hironobu Hamada, Nobuoki Kohno
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0172430

Mesenchymal stromal cells (MSCs) induce ex vivo proliferation and erythroid commitment of cord blood haematopoietic stem cells (CB-CD34+ cells)
Cited by: 27
Author(s): Simone Perucca, Andrea Di Palma, Pier Paolo Piccaluga, Claudia Gemelli, Elisa Zoratti, Giulio Bassi, Edoardo Giacopuzzi, Andrea Lojacono, Giuseppe Borsani, Enrico Tagliafico, Maria Teresa Scupoli, Simona Bernardi, Camilla Zanaglio, Federica Cattina, Valeria Cancelli, Michele Malagola, Mauro Krampera, Mirella Marini, Camillo Almici, Sérgio Ferrari, Domenico Russo
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0110380

Diagnostics for Stochastic Genome-Scale Modeling via Model Slicing and Debugging
Cited by: 0
Author(s): Kevin Tsai, Chia Hui Chang
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0138336

ERBB3 Positively Correlates with Intestinal Stem Cell Markers but Marks a Distinct Non Proliferative Cell Population in Colorectal Cancer
Cited by: 16
Author(s): Thierry Jardé, Lisa Kass, Margaret Staples, Helen E Lescesen, Peter Carne, Karen Oliva, Paul McMurrick, Helen E. Abud
Software Mentions: 1
Published: about 9 years ago

10.3389/fimmu.2021.702615

Identification and Validation of the Immune Regulator CXCR4 as a Novel Promising Target for Gastric Cancer
Cited by: 10
Author(s): Shuai Xue, Ming Ma, Songhua Bei, Fan Li, Chenqu Wu, Huanqing Li, Yanling Hu, Xiaohong Zhang, Yanqing Qian, Zhe Qin, Jun Jiang, Feng Li
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0115791

A Minimal Dose of Electrically Induced Muscle Activity Regulates Distinct Gene Signaling Pathways in Humans with Spinal Cord Injury
Cited by: 24
Author(s): Michael A. Petrie, Manish Suneja, Elizabeth A. Faidley, Richard K. Shields
Software Mentions: 1
Published: almost 10 years ago

Projects: pypi: analysis

Papers Mentioning analysis 2,036