Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: analysis

https://packages.ecosyste.ms/registries/pypi.org/packages/analysis

Source code analysis of Python programs
8 versions
Latest release: over 18 years ago
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Papers Mentioning analysis 2,036

10.3892/ijmm.2014.1843
Comprehensive identification of essential pathways and transcription factors related to epilepsy by gene set enrichment analysis on microarray datasets
Cited by: 8
Author(s): Kan He, Weizhong Xiao, Wen Lv
Software Mentions: 2
Published: over 10 years ago
10.1186/s13045-018-0663-8
Long non-coding RNAs in esophageal cancer: molecular mechanisms, functions, and potential applications
Cited by: 48
Author(s): Min Su, Yuhang Xiao, Junliang Ma, Deliang Cao, Yong Zhou, Hui Wang, Qianjin Liao, Wenxiang Wang
Software Mentions: 2
Published: about 6 years ago
10.1038/s41388-018-0326-9
Transcription factor activating protein 4 is synthetically lethal and a master regulator of MYCN-amplified neuroblastoma
Cited by: 21
Author(s): Shuobo Boboila, Gonzalo Lopez, Jiyang Yu, Debarshi Banerjee, Angela Kadenhe-Chiweshe, Eileen Connolly, Jessica J. Kandel, Presha Rajbhandari, José M. Silva, Andrea Califano, Darrell J. Yamashiro
Software Mentions: 2
Published: over 6 years ago
10.1038/s41389-020-0209-0
PDK1 promotes ovarian cancer metastasis by modulating tumor-mesothelial adhesion, invasion, and angiogenesis via α5β1 integrin and JNK/IL-8 signaling
Cited by: 37
Author(s): Michelle K.Y. Siu, Yuxin Jiang, Jingjing Wang, Thomas Leung, Siew‐Fei Ngu, Annie Nga‐Yin Cheung, Hextan Y.S. Ngan, Ki Chan
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41389-020-0239-7
MeCP2 facilitates breast cancer growth via promoting ubiquitination-mediated P53 degradation by inhibiting RPL5/RPL11 transcription
Cited by: 25
Author(s): Dongdong Tong, Jing Zhang, Xiaofei Wang, Qian Li, Li Ying Liu, Juan Yang, Bo Guo, Lei Ni, Lingyu Zhao, Chen Huang
Software Mentions: 2
Published: over 4 years ago
10.1093/jmcb/mjz092
Isoform-specific involvement of Brpf1 in expansion of adult hematopoietic stem and progenitor cells
Cited by: 4
Author(s): Qiuping He, Ming Hong, Jincan He, Weixin Chen, Meng Zhao, Wei Zhao
Software Mentions: 2
Published: about 5 years ago
10.1007/s00894-015-2635-z
Pressure-imposed changes of benzoic acid crystals
Cited by: 8
Author(s): Piotr Cysewski
Software Mentions: 2
Published: over 9 years ago
10.1007/s12031-018-1206-z
Biomarker and Drug Target Discovery Using Quantitative Proteomics Post-Intracerebral Hemorrhage Stroke in the Rat Brain
Cited by: 16
Author(s): Shuixiang Deng, Sheng-Ya Feng, Wei Wang, Feng Zhao, Yi Gong
Software Mentions: 2
Published: about 6 years ago
10.7554/eLife.47430
TLE3 loss confers AR inhibitor resistance by facilitating GR-mediated human prostate cancer cell growth
Cited by: 21
Author(s): Sander Palit, Daniël J. Vis, Suzan Stelloo, Cor Lieftink, Stefan Prekovic, Elise M. Bekers, Ingrid Hofland, Tonći Šuštić, Liesanne Wolters, Roderick L. Beijersbergen, Andries M. Bergman, Balázs Győrffy, Lodewyk F.A. Wessels, Wilbert Zwart, Michiel S. van der Heijden
Software Mentions: 2
Published: almost 5 years ago
10.7554/eLife.59980
Integration of genomics and transcriptomics predicts diabetic retinopathy susceptibility genes
Cited by: 15
Author(s): Andrew D. Skol, Su-Young Jung, Ana Marija Sokovic, Siquan Chen, Sarah Fazal, Olukayode Sosina, Poulami P Borkar, Amy Lin, Maria Sverdlov, Dingcai Cao, Anand Swaroop, Ionut Bebu, Dcct, Barbara Elaine Stranger, Michael A. Grassi
Software Mentions: 2
Published: about 4 years ago
10.7554/eLife.06011
The Rho-guanine nucleotide exchange factor PDZ-RhoGEF governs susceptibility to diet-induced obesity and type 2 diabetes
Cited by: 18
Author(s): Ying-Ju Chang, Scott Pownall, Thomas E. Jensen, Samar Mouaaz, Warren D. Foltz, Lily Zhou, Nicole Liadis, Min-A Woo, Hao Zhou, Previn Dutt, Philip J. Bilan, Amira Klip, Tak W. Mak, Vuk Stambolic
Software Mentions: 2
Published: about 9 years ago
10.7554/eLife.38986
Abnormal oxidative metabolism in a quiet genomic background underlies clear cell papillary renal cell carcinoma
Cited by: 34
Author(s): Jianing Xu, Ed Reznik, Ho‐Joon Lee, Gunes Gundem, Philip Jonsson, Judy Sarungbam, Anna Bialik, Francisco Sanchez‐Vega, Chad J. Creighton, Jake G. Hoekstra, Li Zhang, Peter Sajjakulnukit, Daniel M. Kremer, Zachary P. Tolstyka, Jozefina Casuscelli, Steve Stirdivant, Jie Tang, Nikolaus Schultz, Paul S Jeng, Yiyu Dong, Wenjing Su, Emily H. Cheng, Paul Russo, Jonathan Coleman, Elli Papaemmanuil, Ying-Bei Chen, Victor E. Reuter, Chris Sander, Scott R. Kennedy, James J. Hsieh, Costas A. Lyssiotis, Satish K. Tickoo, A. Ari Hakimi
Software Mentions: 2
Published: over 5 years ago
10.3390/ijms16036496
Favourable IFNL3 Genotypes Are Associated with Spontaneous Clearance and Are Differentially Distributed in Aboriginals in Canadian HIV-Hepatitis C Co-Infected Individuals
Cited by: 5
Author(s): Nasheed Moqueet, Claire Infante–Rivard, Robert W. Platt, Jim Young, Curtis Cooper, Mark Hull, Sharon Walmsley, Marina B. Klein
Software Mentions: 2
Published: over 9 years ago
10.3390/ijms20030602
Human Brain Endothelial CXCR2 is Inflammation-Inducible and Mediates CXCL5- and CXCL8-Triggered Paraendothelial Barrier Breakdown
Cited by: 24
Author(s): Axel Haarmann, Michael K. Schuhmann, Christine Silwedel, Camelia‐Maria Monoranu, Guido Stoll, Mathias Buttmann
Software Mentions: 2
Published: almost 6 years ago
10.3390/ijms20174267
Ceritinib-Induced Regression of an Insulin-Like Growth Factor-Driven Neuroepithelial Brain Tumor
Cited by: 10
Author(s): Alexandra Russo, Claudia Paret, Francesca Alt, Jürgen Burhenne, Margaux Fresnais, Wolfgang Wagner, Martin Gläser, Hannah Bender, Sabrina Huprich, Patrick N. Harter, Katharina Filipski, Nadine Lehmann, Nora Backes, Lea Roth, Larissa Seidmann, Clemens Sommer, Marc A. Brockmann, Torsten Pietsch, Marie A. Neu, Arthur Wingerter, Jörg Faber
Software Mentions: 2
Published: about 5 years ago
10.3390/ijms20246252
The Major Factors Causing the Microspore Abortion of Genic Male Sterile Mutant NWMS1 in Wheat (Triticum aestivum L.)
Cited by: 17
Author(s): Junchang Li, Jing Zhang, Huijuan Li, Hao Niu, Qiaoqiao Xu, Zhixin Jiao, Junhang An, Yumei Jiang, Qiaoyun Li, Jishan Niu
Software Mentions: 2
Published: almost 5 years ago
10.3390/ijms21113783
Genome-Wide Identification of Epigenetic Regulators in Quercus suber L.
Cited by: 6
Author(s): Helena G. Silva, Rómulo Sacramento Sobral, Alexandre Papadopoulos Magalhães, Leonor Morais-Cecílio, Maria Manuela Ribeiro Costa
Software Mentions: 2
Published: over 4 years ago
10.3390/ijms21228730
Network Analysis of Gut Microbiome and Metabolome to Discover Microbiota-Linked Biomarkers in Patients Affected by Non-Small Cell Lung Cancer
Cited by: 60
Author(s): Pamela Vernocchi, Tommaso Gili, Federica Conte, Federica Del Chierico, Giorgia Conta, Alfredo Miccheli, Andrea Botticelli, Paola Paci, Guido Caldarelli, Marianna Nuti, Paolo Marchetti, Lorenza Putignani
Software Mentions: 2
Published: about 4 years ago
10.3390/ijms22020712
An Integrative Transcriptomic Analysis of Systemic Juvenile Idiopathic Arthritis for Identifying Potential Genetic Markers and Drug Candidates
Cited by: 3
Author(s): Daeun Kim, Jaeseung Song, Sora Lee, Junghyun Jung, Wonhee Jang
Software Mentions: 2
Published: almost 4 years ago
10.3390/ijms22052452
A Systems Biology Approach to Investigating the Interaction between Serotonin Synthesis by Tryptophan Hydroxylase and the Metabolic Homeostasis
Cited by: 11
Author(s): Suhyeon Park, Yumin Kim, Jibeom Lee, Jeong Yun Lee, Hail Kim, Sunjae Lee, Chang‐Myung Oh
Software Mentions: 2
Published: over 3 years ago
10.3390/ijms22073489
CRISPR-Cas9–Mediated TIM3 Knockout in Human Natural Killer Cells Enhances Growth Inhibitory Effects on Human Glioma Cells
Cited by: 30
Author(s): Takayuki Morimoto, Tsutomu Nakazawa, Ryosuke Matsuda, Fusanori Nishimura, Mitsutoshi Nakamura, Shuichi Yamada, Ichiro Nakagawa, Young-Soo Park, Takahiro Tsujimura, Hiroyuki Nakase
Software Mentions: 2
Published: over 3 years ago
10.3390/ijms22189957
Genome-Wide Identification and Analyses of Drought/Salt-Responsive Cytochrome P450 Genes in Medicago truncatula
Cited by: 8
Author(s): Xia Yin, Yang Jiao, Lin Ma, Yan Su, Yongzhen Pang
Software Mentions: 2
Published: about 3 years ago
10.1016/j.isci.2020.101497
Genome of Tetraploid Fish Schizothorax o'connori Provides Insights into Early Re-diploidization and High-Altitude Adaptation
Cited by: 23
Author(s): Shijun Xiao, Zhenbo Mou, Dingding Fan, Zhou He, Ming Zou, Yu Zeng, Chaowei Zhou, Ruibin Yang, Jiaqi Liu, Shilin Zhu, Yajuan Li, Yanchao Liu, Fei Liu, Wanliang Wang, Benhe Zeng, Hong Li, Di Wang, Haiping Li
Software Mentions: 2
Published: about 4 years ago
10.18632/oncotarget.9626
Transcriptomic and proteomic analysis of mouse radiation-induced acute myeloid leukaemia (AML)
Cited by: 6
Author(s): Christophe Badie, Agnieszka Blachowicz, Žarko Barjaktarović, Rosemary Finnon, Arlette Michaux, Hakan Sarioglu, Natalie Brown, Grainne Manning, Mohammed Abderrafi Benotmane, Soile Tapio, Joanna Polańska, Simon Bouffler
Software Mentions: 2
Published: over 8 years ago
10.18632/oncotarget.18978
EB1 protein alteration characterizes sporadic but not ulcerative colitis associated colorectal cancer
Cited by: 6
Author(s): Timo Gemoll, Sophie L. Kollbeck, Karl Karstens, Gia G. Hò, Sonja Hartwig, Sarah Strohkamp, Katharina Schillo, Christoph Thorns, Martina Oberländer, Kathrin Kalies, Stefan Lehr, Jens K. Habermann
Software Mentions: 2
Published: over 7 years ago
10.18632/oncotarget.20537
Identification of candidate genes related to pancreatic cancer based on analysis of gene co-expression and protein-protein interaction network
Cited by: 10
Author(s): Tiejun Zhang, Xiaojuan Wang, Z.Q. Yue
Software Mentions: 2
Published: over 7 years ago
10.18632/oncotarget.21546
Identification of hub genes related to silicone-induced immune response in rats
Cited by: 5
Author(s): Xiaolu Huang, Yiwen Zhou, Wenhui Liu, Haizhou Li, Xiao Liang, Rui Jin, Hengyu Du, Jianjun He, Bangda Chai, Ran Duan, Qingfeng Li
Software Mentions: 2
Published: about 7 years ago
10.18632/oncotarget.22009
The WAVE3-YB1 interaction regulates cancer stem cells activity in breast cancer
Cited by: 21
Author(s): Kamila Błędzka, Barbara J. Schiemann, William P. Schiemann, Paul L. Fox, Edward F. Plow, Khalid Sossey‐Alaoui
Software Mentions: 2
Published: about 7 years ago
10.18632/oncotarget.22402
NMR-based metabolomic techniques identify potential urinary biomarkers for early colorectal cancer detection
Cited by: 41
Author(s): Zhening Wang, Yan Lin, Jiahao Liang, Yao Huang, Changchun Ma, Xingmu Liu, Ju-Rong Yang
Software Mentions: 2
Published: about 7 years ago
10.18632/oncotarget.23254
Long non-coding RNA <i>GAS5</i> and <i>ZFAS1</i> are prognostic markers involved in translation targeted by <i>miR-940</i> in prostate cancer
Cited by: 30
Author(s): Xin Chen, Chao Yang, Shengli Xie, Edwin Cheung
Software Mentions: 2
Published: almost 7 years ago
10.18632/oncotarget.24047
Molecular characterization of breast cancer cell response to metabolic drugs
Cited by: 22
Author(s): Lucía Trilla-Fuertes, Angelo Gámez‐Pozo, Jorge M. Arevalillo, Mariana Díaz-Almirón, Guillermo Prado-Vázquez, Andrea Zapater-Moros, Hilario Navarro, Rosa Aras-López, Irene Dapía, Rocío López-Vacas, Paolo Nanni, Sara Llorente-Armijo, Pedro Arias, Alberto M. Borobia, Paloma Maı́n, Jaime Feliú, Enrique Espinosa, Juan Ángel Fresno Vara
Software Mentions: 2
Published: almost 7 years ago
10.1002/cjp2.191
Overactivation of the <scp>IGF</scp> signalling pathway in osteosarcoma: a potential therapeutic target?
Cited by: 5
Author(s): Baptiste Ameline, Michal Kováč, Michaela Nathrath, Maxim Barenboim, Olaf Witt, Andreas H. Krieg, Daniel Baumhoer
Software Mentions: 2
Published: almost 4 years ago
10.3390/jpm10040282
Digital Phenotyping and Patient-Generated Health Data for Outcome Measurement in Surgical Care: A Scoping Review
Cited by: 16
Author(s): Prakash Jayakumar, Eugenia Lin, Vincent P Galea, Abraham J Mathew, Nikhil Panda, Imelda Vetter, Alex B. Haynes
Software Mentions: 2
Published: almost 4 years ago
10.4103/0975-7406.76463
Differential scanning calorimetry: An invaluable tool for a detailed thermodynamic characterization of macromolecules and their interactions
Cited by: 278
Author(s): Michael Chiu, Elmar J. Prenner
Software Mentions: 2
Published: almost 14 years ago
10.1262/jrd.2018-136
Glycerol kinase 2 is essential for proper arrangement of crescent-like mitochondria to form the mitochondrial sheath during mouse spermatogenesis
Cited by: 27
Author(s): Keisuke Shimada, Hirotaka Kato, Haruhiko Miyata, Masahito Ikawa
Software Mentions: 2
Published: almost 6 years ago
10.1186/s12967-020-02630-3
A machine learning-based clinical tool for diagnosing myopathy using multi-cohort microarray expression profiles
Cited by: 6
Author(s): Andrew Tran, Chris J. Walsh, Jane Batt, Claudia C. dos Santos, Pingzhao Hu
Software Mentions: 2
Published: almost 4 years ago
10.1186/1479-5876-4-29
Gene expression in acute Stanford type A dissection: a comparative microarray study
Cited by: 44
Author(s): Barbara Theresia Weis-Müller, Olga Modlich, Irina Drobinskaya, Derya Unay, Rita Huber, Hans Bojar, Jochen D. Schipke, P. Feindt, E. Gams, Wolfram Müller, Timm O. Goecke, W. Sandmann
Software Mentions: 2
Published: over 18 years ago
10.3390/nu10091255
Lactobacillus acidophilus DDS-1 Modulates the Gut Microbiota and Improves Metabolic Profiles in Aging Mice
Cited by: 57
Author(s): Ravichandra Vemuri, Rajaraman Eri, Rohit Gundamaraju, Shakuntla Gondalia, Avinash V. Karpe, David J. Beale, Christopher Martoni, Rajaraman Eri
Software Mentions: 2
Published: about 6 years ago
10.3390/nu12103140
Statistical and Machine-Learning Analyses in Nutritional Genomics Studies
Cited by: 14
Author(s): Leila Khorraminezhad, Mickaël Leclercq, Arnaud Droit, Jean‐François Bilodeau, Iwona Rudkowska
Software Mentions: 2
Published: about 4 years ago
10.3390/nu13061788
Hepatic Nfe2l2 Is Not an Essential Mediator of the Metabolic Phenotype Produced by Dietary Methionine Restriction
Cited by: 4
Author(s): Fei Han, Kirsten P. Stone, Sujoy Ghosh, Laura A. Forney, Landon C. Sims, Leighann Y Vincik, Thomas W. Gettys
Software Mentions: 2
Published: over 3 years ago
10.3390/e21020102
Using High-Frequency Entropy to Forecast Bitcoin’s Daily Value at Risk
Cited by: 17
Author(s): Daniel Traian Pele, Miruna Mazurencu-Marinescu-Pele
Software Mentions: 1
Published: almost 6 years ago
10.3390/e21050525
Evaluating Approximations and Heuristic Measures of Integrated Information
Cited by: 13
Author(s): André Sevenius Nilsen, Bjørn Erik Juel, William Marshall
Software Mentions: 1
Published: over 5 years ago
10.3390/ijms11114326
3D-QSAR and Molecular Docking Studies on Derivatives of MK-0457, GSK1070916 and SNS-314 as Inhibitors against Aurora B Kinase
Cited by: 12
Author(s): Baidong Zhang, Yan Li, Huixiao Zhang, Chun-Zhi Ai
Software Mentions: 1
Published: about 14 years ago
10.3390/ijms12021196
Studies of New Fused Benzazepine as Selective Dopamine D3 Receptor Antagonists Using 3D-QSAR, Molecular Docking and Molecular Dynamics
Cited by: 9
Author(s): Jing Liu, Yanyan Li, Shuwei Zhang, Zhengtao Xiao, Chun-Zhi Ai
Software Mentions: 1
Published: almost 14 years ago
10.3390/ijms12107022
Comparative Molecular Field Analysis (CoMFA) and Comparative Molecular Similarity Indices Analysis (CoMSIA) Studies on α1A-Adrenergic Receptor Antagonists Based on Pharmacophore Molecular Alignment
Cited by: 29
Author(s): Xin Zhao, Minsheng Chen, Biyun Huang, Hong Ji, Ming Yuan
Software Mentions: 1
Published: about 13 years ago
10.1289/ehp.1205552
Toxicokinetic Modeling of Persistent Organic Pollutant Levels in Blood from Birth to 45 Months of Age in Longitudinal Birth Cohort Studies
Cited by: 55
Author(s): Marc-André Verner, Dean Sonneborn, Kinga Lancz, Gina Muckle, Pierre Ayotte, Éric Dewailly, Anton Kočan, Ľubica Palkovičová, T. Trnovec, Sami Haddad, Irva Hertz‐Picciotto, Merete Eggesbø
Software Mentions: 1
Published: almost 12 years ago
10.3390/ijms13010840
MiRNAs and LincRNAs: Could They Be Considered as Biomarkers in Colorectal Cancer?
Cited by: 27
Author(s): Ruth Zárate, Valentina Boni, Eva Bandrés, Jesús Garcı́a-Foncillas
Software Mentions: 1
Published: almost 13 years ago
10.1007/s11356-020-09563-w
Uranium and neptunium retention mechanisms in Gallionella ferruginea/ferrihydrite systems for remediation purposes
Cited by: 7
Author(s): Evelyn Krawczyk-Bärsch, Andreas C. Scheinost, André Roßberg, K. Müller, Frank Bok, Lotta Hallbeck, Jana Lehrich, Katja Schmeide
Software Mentions: 1
Published: over 4 years ago
10.3390/ijms13066620
Pharmacophore and Molecular Docking Guided 3D-QSAR Study of Bacterial Enoyl-ACP Reductase (FabI) Inhibitors
Cited by: 12
Author(s): Xiaoyun Lu, Man Lv, Kun Huang, Ke Ding, You Qin
Software Mentions: 1
Published: over 12 years ago
10.3390/ijms140816970
Structural Properties of Polyphenols Causing Cell Cycle Arrest at G1 Phase in HCT116 Human Colorectal Cancer Cell Lines
Cited by: 30
Author(s): Soon Young Shin, Hyuk Yoon, Seunghyun Ahn, Dong-Wook Kim, Dong-Ho Bae, Dongsoo Koh, Young Han Lee, Yoongho Lim
Software Mentions: 1
Published: over 11 years ago
10.14202/vetworld.2019.1840-1848
Virulence and antibiotic resistance profile of avian Escherichia coli strains isolated from colibacillosis lesions in central of Algeria
Cited by: 7
Author(s): Nacima Meguenni, Nathalie Chanteloup, Angelina Tourtereau, Chafika Ali Ahmed, Saliha Bounar-Kechih, Catherine Schouler
Software Mentions: 1
Published: about 5 years ago
10.3390/ijms151018856
Computer-Aided Targeting of the PI3K/Akt/mTOR Pathway: Toxicity Reduction and Therapeutic Opportunities
Cited by: 52
Author(s): Li Tan, Guanyu Wang
Software Mentions: 1
Published: about 10 years ago
10.1007/s10096-017-3024-6
Bacterial genome sequencing in clinical microbiology: a pathogen-oriented review
Cited by: 78
Author(s): Florian Tagini, Gilbert Greub
Software Mentions: 1
Published: over 7 years ago
10.1007/s00259-020-04880-1
Clinical evaluation of [18F] JNJ-64326067, a novel candidate PET tracer for the detection of tau pathology in Alzheimer’s disease
Cited by: 17
Author(s): Mark E. Schmidt, Luc Janssens, Diederik Moechars, Frederik Rombouts, Maarten Timmers, Olivier Barret, Cristian Constantinescu, Jennifer Madonia, David Russell, Christine Sandiego, Hartmuth C. Kolb
Software Mentions: 1
Published: over 4 years ago
10.1002/ejp.1534
Blockade of BDNF signalling attenuates chronic visceral hypersensitivity in an IBS‐like rat model
Cited by: 25
Author(s): Fudong Fan, Ying Tang, Hengfen Dai, Yang Cao, Pei Sun, Yu Chen, Aiqin Chen, Chun Lin
Software Mentions: 1
Published: almost 5 years ago
10.1186/2045-824X-3-22
Inhibition of cyclo-oxygenase 2 reduces tumor metastasis and inflammatory signaling during blockade of vascular endothelial growth factor
Cited by: 12
Author(s): Jason C. Fisher, Jeffrey W. Gander, Mary Jo Haley, Sonia L. Hernandez, Jianzhong Huang, Yan-Jung Chang, Tessa Johung, Paolo Guarnieri, Kathleen O’Toole, Darrell J. Yamashiro, Jessica J. Kandel
Software Mentions: 1
Published: almost 14 years ago
10.1016/j.vaccine.2018.12.040
Demonstrating vaccine effectiveness during a waning epidemic: A WHO/NIH meeting report on approaches to development and licensure of Zika vaccine candidates
Cited by: 51
Author(s): Kirsten Vannice, M. Cristina Cassetti, Robert W. Eisinger, Joachim Hombach, Ivana Knežević, Hilary D. Marston, Annelies Wilder‐Smith, Marco Cavaleri, Philip R. Krause
Software Mentions: 1
Published: almost 6 years ago
10.1007/s00330-018-5984-z
Multi-parametric and multi-regional histogram analysis of MRI: modality integration reveals imaging phenotypes of glioblastoma
Cited by: 16
Author(s): Chao Li, Shuo Wang, Angela Serra, Turid Torheim, Jiun-Lin Yan, Natalie R. Boonzaier, Yuan Huang, Tomasz Matys, Mary A. McLean, Florian Markowetz, Stephen J. Price
Software Mentions: 1
Published: almost 6 years ago
10.1155/2013/818709
Integration of Different “-omics” Technologies Identifies Inhibition of the IGF1R-Akt-mTOR Signaling Cascade Involved in the Cytotoxic Effect of Shikonin against Leukemia Cells
Cited by: 23
Author(s): Benjamin Wiench, Yet-Ran Chen, Malte Paulsen, Rebecca Hamm, Sven Schröder, Ning‐Sun Yang, Thomas Efferth
Software Mentions: 1
Published: almost 12 years ago
10.1155/2017/6037037
The Effects of Modified Simiao Decoction in the Treatment of Gouty Arthritis: A Systematic Review and Meta-Analysis
Cited by: 19
Author(s): Ya‐Fei Liu, Ying Huang, Cai-Yu-Zhu Wen, Junjun Zhang, Guolan Xing, Shenghao Tu, Zhe Chen
Software Mentions: 1
Published: almost 8 years ago
10.1016/j.vaccine.2015.05.025
Understanding immune protection against tuberculosis using RNA expression profiling
Cited by: 8
Author(s): Ulrich von Both, Myrsini Kaforou, Michael Levin, Sandra M. Newton
Software Mentions: 1
Published: about 9 years ago
10.1155/2013/410793
Extracts of<i>Tripterygium wilfordii</i>Hook F in the Treatment of Rheumatoid Arthritis: A Systemic Review and Meta-Analysis of Randomised Controlled Trials
Cited by: 33
Author(s): Yafei Liu, Shenghao Tu, Weina Gao, Yu Wang, Peilin Liu, Yonghong Hu, Hui Dong
Software Mentions: 1
Published: almost 12 years ago
10.1155/2021/5526778
Combined Lipidomics and Network Pharmacology Study of Protective Effects of Salvia miltiorrhiza against Blood Stasis Syndrome
Cited by: 6
Author(s): Yidian Jin, Zheng Xie, Shasha Li, Xiangyu Zeng, Leqi Wang, Ping Hu, Hongyang Zhang, Xiao Xue
Software Mentions: 1
Published: over 3 years ago
10.1111/eva.12846
Recent insights into the genotype–phenotype relationship from massively parallel genetic assays
Cited by: 49
Author(s): Harry Kemble, Philippe Nghe, Olivier Tenaillon
Software Mentions: 1
Published: over 5 years ago
10.3390/ijms151018919
Protective Effects of a New Phloretin Derivative against UVB-Induced Damage in Skin Cell Model and Human Volunteers
Cited by: 32
Author(s): Seoungwoo Shin, Hyunwoo Kum, Dehun Ryu, Minkyung Kim, Eunsun Jung, Deokhoon Park
Software Mentions: 1
Published: about 10 years ago
10.1186/s13024-016-0129-9
A Christianson syndrome-linked deletion mutation (∆287ES288) in SLC9A6 disrupts recycling endosomal function and elicits neurodegeneration and cell death
Cited by: 22
Author(s): Alina Ilie, Andy Gao, Jonathan P. Reid, Annie Boucher, Cassandra McEwan, Hervé Barrière, Gergely L. Lukacs, R. Anne McKinney, John Orlowski
Software Mentions: 1
Published: about 8 years ago
10.1186/s13024-017-0234-4
Molecular and functional signatures in a novel Alzheimer’s disease mouse model assessed by quantitative proteomics
Cited by: 57
Author(s): Dong Kyu Kim, Joonho Park, Dohyun Han, Jinhee Yang, Ahbin Kim, Jongmin Jacob Woo, Youngsoo Kim, Inhee Mook‐Jung
Software Mentions: 1
Published: almost 7 years ago
10.1186/s40164-016-0036-3
New CD20 alternative splice variants: molecular identification and differential expression within hematological B cell malignancies
Cited by: 15
Author(s): Clémentine Gamonet, Elodie Bôle‐Richard, Aurélia Delherme, F. Aubin, Éric Toussirot, Francine Garnache‐Ottou, Yann Godet, Loïc Ysebaert, Olivier Tournilhac, Caroline Dartigeas, Fabrice Larosa, Eric Deconinck, Philippe Saas, Christophe Borg, Marina Deschamps, Christophe Ferrand
Software Mentions: 1
Published: almost 9 years ago
10.1186/1471-2105-14-S17-A11
Differential coexpression network modules observed in human hepatocellular carcinoma progression
Cited by: 0
Author(s): Hui Yu, Zhongming Zhao
Software Mentions: 1
Published: about 11 years ago
10.3892/etm.2015.2239
Impact of ankylosing spondylitis on sexual function: A systematic review and meta-analysis
Cited by: 15
Author(s): Ya‐Fei Liu, Hui Dong, Zhe Chen, Yu Wang, Shenghao Tu
Software Mentions: 1
Published: almost 10 years ago
10.1517/21678707.2015.1083853
New therapeutic targets in rare genetic skeletal diseases
Cited by: 31
Author(s): Michael D. Briggs, Peter A. Bell, Michael J. Wright, Katarzyna A. Piróg
Software Mentions: 1
Published: about 9 years ago
10.12688/f1000research.2-68.v1
The Focal Adhesion Analysis Server: a web tool for analyzing focal adhesion dynamics
Cited by: 126
Author(s): Matthew E. Berginski, Shawn M. Gomez
Software Mentions: 1
Published: over 11 years ago
10.1093/molehr/gaz034
Continuous behavioural ‘switching’ in human spermatozoa and its regulation by Ca2+-mobilising stimuli
Cited by: 10
Author(s): Cosmas Ezekaibeya Achikanu, Joao Correia, Héctor Alejandro Guidobaldi, Laura Cecilia Giojalas, Christopher L.R. Barratt, Sarah Martins da Silva, Stephen J. Publicover
Software Mentions: 1
Published: over 5 years ago
10.3390/molecules25163738
NMR Metabolomics Applied on the Discrimination of Variables Influencing Tomato (Solanum lycopersicum)
Cited by: 17
Author(s): Ana Cristina Abreu, Ignacio Fernández
Software Mentions: 1
Published: over 4 years ago
10.3390/foods9121907
Impact of Processing and Extraction on the Minor Components of Green Spanish-Style Gordal Table Olive Fat, as Assessed by Innovative Approaches
Cited by: 2
Author(s): Antonio López‐López, Amparo Cortés-Delgado, Antonio Garrido‐Fernández
Software Mentions: 1
Published: almost 4 years ago
10.3390/foods10050990
Consumer Acceptability and Sensory Profile of Sustainable Paper-Based Packaging
Cited by: 12
Author(s): Stella Lignou, Omobolanle O. Oloyede
Software Mentions: 1
Published: over 3 years ago
10.3390/molecules23010148
Current NMR Techniques for Structure-Based Drug Discovery
Cited by: 84
Author(s): Toshihiko Sugiki, Kyoko Furuita, Toshimichi Fujiwara, Chojiro Kojima
Software Mentions: 1
Published: almost 7 years ago
10.3389/fnagi.2021.625874
Fixel-Based Analysis of White Matter Degeneration in Patients With Progressive Supranuclear Palsy or Multiple System Atrophy, as Compared to Parkinson's Disease
Cited by: 9
Author(s): Thanh-Thao Nguyen, Jur–Shan Cheng, Yao-Liang Chen, Yu-Chun Lin, Ching‐Chou Tsai, Chin‐Song Lu, Yi-Hsin Weng, Yi-Ming Wu, Ngoc-Thanh Hoang, Jiun‐Jie Wang
Software Mentions: 1
Published: over 3 years ago
10.3389/fnbeh.2016.00194
Attention Performance Measured by Attention Network Test Is Correlated with Global and Regional Efficiency of Structural Brain Networks
Cited by: 32
Author(s): Min Xiao, Haitao Ge, Budhachandra Khundrakpam, Junhai Xu, Gleb Bezgin, Yuan Leng, Lu Zhao, Yuchun Tang, Xinting Ge, Sohee Jeon, Wenjian Xu, Alan C. Evans, Shuwei Liu
Software Mentions: 1
Published: about 8 years ago
10.3390/molecules22071033
Total Flavonoids of Drynariae Rhizoma Prevent Bone Loss Induced by Hindlimb Unloading in Rats
Cited by: 32
Author(s): Shuanghong Song, Ziyang Gao, Xujun Lei, Youguo Niu, Yuan Zhang, Cuiqin Li, Yi Lu, Wenna Li, Peng Shang
Software Mentions: 1
Published: over 7 years ago
10.3389/fbioe.2015.00001
Systems and Photosystems: Cellular Limits of Autotrophic Productivity in Cyanobacteria
Cited by: 56
Author(s): Robert L. Burnap
Software Mentions: 1
Published: almost 10 years ago
10.1515/med-2020-0128
GABRD promotes progression and predicts poor prognosis in colorectal cancer
Cited by: 17
Author(s): Gengming Niu, Li Deng, Xiaotian Zhang, Zhiqing Hu, Shanliang Han, Ke Xu, Runqi Hong, He Meng, Chongwei Ke
Software Mentions: 1
Published: almost 5 years ago
10.3389/fbioe.2020.584178
Modeling Cell-Free Protein Synthesis Systems—Approaches and Applications
Cited by: 6
Author(s): Jan Müller, Martin Siemann‐Herzberg, Ralf Takors
Software Mentions: 1
Published: about 4 years ago
10.3390/molecules24162978
Characterization of the Key Aroma Compounds in Marselan Wine by Gas Chromatography-Olfactometry, Quantitative Measurements, Aroma Recombination, and Omission Tests
Cited by: 30
Author(s): Jiaheng Lyu, Yue Ma, Yan Xu, Yao Nie, Ke Tang
Software Mentions: 1
Published: over 5 years ago
10.3389/fcvm.2021.735118
A Novel Computed Tomography-Based Imaging Approach for Etiology Evaluation in Patients With Acute Coronary Syndrome and Non-obstructive Coronary Angiography
Cited by: 1
Author(s): Runjianya Ling, Li Yu, Zhigang Lu, Yuehua Li, Jiayin Zhang
Software Mentions: 1
Published: over 3 years ago
10.3390/ijms160715578
DDX3X Biomarker Correlates with Poor Survival in Human Gliomas
Cited by: 29
Author(s): Dueng‐Yuan Hueng, Wen‐Chiuan Tsai, Hung Yi Chiou, Shao-Wei Feng, Chin Lin, Yao‐Feng Li, Li‐Chun Huang, Ming‐Hong Lin
Software Mentions: 1
Published: over 9 years ago
10.3390/molecules21020186
Peltomexicanin, a Peltogynoid Quinone Methide from Peltogyne Mexicana Martínez Purple Heartwood
Cited by: 5
Author(s): Paulina Gutiérrez-Macías, Javier Peralta‐Cruz, Amparo Borja-de la Rosa, Blanca E. Barragán-Huerta
Software Mentions: 1
Published: almost 9 years ago
10.3390/ijms160818348
Overview of Nrf2 as Therapeutic Target in Epilepsy
Cited by: 45
Author(s): Liliana Carmona-Aparicio, Claudia Pérez-Cruz, Cecilia Zavala-Tecuapetla, Leticia Granados-Rojas, Liliana Rivera-Espinosa, Hortencia Montesinos-Correa, Jacqueline Hernández-Damián, José Pedraza-Chaverrı́, Alicia Sampieri, Elvia Coballase-Urrutía, Noemí Cárdenas-Rodríguez
Software Mentions: 1
Published: over 9 years ago
10.3390/molecules23061297
Beneficial Effects of Green Tea Catechins on Neurodegenerative Diseases
Cited by: 152
Author(s): Monira Pervin, Keiko Unno, Tomokazu Ohishi, Hiroki Tanabe, Noriyuki Miyoshi, Yoriyuki Nakamura
Software Mentions: 1
Published: over 6 years ago
10.3390/molecules25020406
Profiling the Structural Determinants of Aryl Benzamide Derivatives as Negative Allosteric Modulators of mGluR5 by In Silico Study
Cited by: 7
Author(s): Yujing Zhao, Jiabin Chen, Qilei Liu, Yan Li
Software Mentions: 1
Published: almost 5 years ago
10.3389/fcell.2019.00187
Coupling Phase Behavior of Fatty Acid Containing Membranes to Membrane Bio-Mechanics
Cited by: 25
Author(s): Arwen I. I. Tyler, Jake L. Greenfield, John M. Seddon, Nicholas J. Brooks, Sowmya Purushothaman
Software Mentions: 1
Published: about 5 years ago
10.3389/fcell.2019.00145
Monensin Sensitive 1 Regulates Dendritic Arborization in Drosophila by Modulating Endocytic Flux
Cited by: 1
Author(s): Rohit Krishnan Harish, Shweta Tendulkar, Senthilkumar Deivasigamani, Anuradha Ratnaparkhi, Girish S. Ratnaparkhi
Software Mentions: 1
Published: over 5 years ago
10.3389/fcell.2021.607628
Insights on the Control of Yeast Single-Cell Growth Variability by Members of the Trehalose Phosphate Synthase (TPS) Complex
Cited by: 2
Author(s): Sevan Arabaciyan, Michael Saint-Antoine, Cathy Maugis-Rabusseau, Jean-Marie François, Abhyudai Singh, Jean-Luc Parrou, Jean‐Pascal Capp
Software Mentions: 1
Published: almost 4 years ago
10.3390/ijms160920118
Insight into the Structural Determinants of Imidazole Scaffold-Based Derivatives as TNF-α Release Inhibitors by in Silico Explorations
Cited by: 4
Author(s): Yuan Wang, Mingwei Wu, Chun-Zhi Ai, Yonghua Wang
Software Mentions: 1
Published: over 9 years ago
10.3390/molecules25204606
Significance of Targeting VEGFR-2 and Cyclin D1 in Luminal-A Breast Cancer
Cited by: 16
Author(s): Ashraf N. Abdalla, Amal Qattan, Waleed H. Malki, Imran Shahid, Mohammad Akbar Hossain, Muhammad Ahmed
Software Mentions: 1
Published: about 4 years ago
10.3390/ijms161024451
Studies on [5,6]-Fused Bicyclic Scaffolds Derivatives as Potent Dual B-RafV600E/KDR Inhibitors Using Docking and 3D-QSAR Approaches
Cited by: 9
Author(s): Haichun Liu, San-Zhi Tang, Shan Lü, Ting Ran, Jian Wang, Yanmin Zhang, Alan Xu, Tao Lü, Yadong Chen
Software Mentions: 1
Published: about 9 years ago
10.3389/fcell.2021.633937
Urothelial Cancer Associated 1 (UCA1) and miR-193 Are Two Non-coding RNAs Involved in Trophoblast Fusion and Placental Diseases
Cited by: 5
Author(s): Clara Apicella, Camino S. M. Ruano, Sébastien Jacques, Géraldine Gascoin, Céline Méhats, Daniel Vaiman, Francisco Miralles
Software Mentions: 1
Published: over 3 years ago
10.1186/1471-2105-15-45
DFLAT: functional annotation for human development
Cited by: 19
Author(s): Heather C. Wick, Harold J. Drabkin, Huy Ngu, Michael Sackman, Craig Fournier, Jessica Haggett, Judith A. Blake, Diana W. Bianchi, Donna K. Slonim
Software Mentions: 1
Published: almost 11 years ago
10.3390/molecules20034071
Synthesis, Antifungal Activity and QSAR of Some Novel Carboxylic Acid Amides
Cited by: 20
Author(s): Shaowu Du, Huizhe Lu, Dongyan Yang, Hong Li, Xilin Gu, Chuan Wan, Changqing Jia, Mian Wang, Xiuyun Liu, Zhaohai Qin
Software Mentions: 1
Published: over 9 years ago
10.3389/fcell.2021.619396
Comprehensive Analysis of the Clinical and Biological Significances of Endoplasmic Reticulum Stress in Diffuse Gliomas
Cited by: 13
Author(s): Ruoyu Huang, Guanzhang Li, Kuanyu Wang, Zhiliang Wang, Fan Zeng, Huimin Hu, Tao Jiang
Software Mentions: 1
Published: over 3 years ago