10.1371/journal.pone.0067489

Fetal DNA Methylation Associates with Early Spontaneous Preterm Birth and Gestational Age
Cited by: 84
Author(s): Sasha Parets, Karen N. Conneely, Varun Kilaru, Stephen J. Fortunato, Tariq Ali Syed, George R. Saade, Alicia K. Smith, Ramkumar Menon
Software Mentions: 2
Published: over 12 years ago

10.1371/journal.pone.0118466

Ancestry Dependent DNA Methylation and Influence of Maternal Nutrition
Cited by: 40
Author(s): Khyobeni Mozhui, Alicia K. Smith, Frances A. Tylavsky
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0070412

Detection of Deregulated Modules Using Deregulatory Linked Path
Cited by: 5
Author(s): Yuxuan Hu, Lin Gao, Kai Shi, David Chiu
Software Mentions: 2
Published: over 12 years ago

10.1371/journal.pone.0094700

The Role of Wildfire, Prescribed Fire, and Mountain Pine Beetle Infestations on the Population Dynamics of Black-Backed Woodpeckers in the Black Hills, South Dakota
Cited by: 31
Author(s): Christopher T. Rota, Joshua J. Millspaugh, Mark A. Rumble, Chad P. Lehman, Dylan C. Kesler
Software Mentions: 2
Published: over 11 years ago

10.3390/cancers13123057

Distinct Responsiveness of Tumor-Associated Macrophages to Immunotherapy of Tumors with Different Mechanisms of Major Histocompatibility Complex Class I Downregulation
Cited by: 2
Author(s): Adrianna Piatakova, Ingrid Poláková, Jana Šmahelová, Shweta Dilip Johari, Jaroslav Nunvář, Michal Šmahel
Software Mentions: 2
Published: over 4 years ago

10.3390/cancers11121880

Delineation of Tumor Migration Paths by Using a Bayesian Biogeographic Approach
Cited by: 6
Author(s): Antonia Chroni, Tracy Vu, Sayaka Miura, Sudhir Kumar
Software Mentions: 2
Published: about 6 years ago

10.3390/cancers11081050

PD-L1 Blockade by Atezolizumab Downregulates Signaling Pathways Associated with Tumor Growth, Metastasis, and Hypoxia in Human Triple Negative Breast Cancer
Cited by: 46
Author(s): Reem Saleh, Rowaida Z. Taha, Varun Sasidharan Nair, Nehad M. Alajez, Eyad Elkord
Software Mentions: 2
Published: over 6 years ago

10.3390/cancers13143388

Extracellular Vesicle Transmission of Chemoresistance to Ovarian Cancer Cells Is Associated with Hypoxia-Induced Expression of Glycolytic Pathway Proteins, and Prediction of Epithelial Ovarian Cancer Disease Recurrence
Cited by: 32
Author(s): Mona Alharbi, Andrew Lai, Shayna Sharma, Priyakshi Kalita-de Croft, Nihar Godbole, América Campos, Dominic Guanzon, Alexis Salas-Burgos, Flavio Carrión, Felipe Zúñiga, Lewis Perrin, Yaowu He, Tanja Pejović, Carmen Winters, Terry K. Morgan, John D. Hooper, Gregory E. Rice, Carlos Salomón
Software Mentions: 2
Published: over 4 years ago

10.3390/cancers12020363

Integrin α7 and Extracellular Matrix Laminin 211 Interaction Promotes Proliferation of Acute Myeloid Leukemia Cells and Is Associated with Granulocytic Sarcoma
Cited by: 13
Author(s): Nobuhiko Kobayashi, Tsukasa Oda, Makiko Takizawa, Takuma Ishizaki, Norifumi Tsukamoto, Akihiko Yokohama, Hisashi Takei, Takayuki Saitoh, Hiroaki Shimizu, Kazuki Honma, Kei Kimura-Masuda, Yuko Kuroda, Rei Ishihara, Yuki Murakami, Hirokazu Murakami, Hiroshi Handa
Software Mentions: 2
Published: almost 6 years ago

10.1038/cddis.2014.542

The malignant phenotype in breast cancer is driven by eIF4A1-mediated changes in the translational landscape
Cited by: 124
Author(s): A. Modelska, Ernest Turro, Robert B. Russell, J Beaton, Thomas Sbarrato, Keith A. Spriggs, Jodi Miller, Stefan Gräf, Elena Provenzano, Fiona M. Blows, Paul D.P. Pharoah, Carlos Caldas, John Le Quesne
Software Mentions: 2
Published: almost 11 years ago

10.1038/s41419-020-2482-4

The H2B ubiquitin-protein ligase RNF40 is required for somatic cell reprogramming
Cited by: 11
Author(s): Wanhua Xie, Michaela Miehe, Sandra D. Laufer, Steven A. Johnsen
Software Mentions: 2
Published: over 5 years ago

10.1111/cpr.13049

Retinoic acid induces NELFA‐mediated 2C‐like state of mouse embryonic stem cells associates with epigenetic modifications and metabolic processes in chemically defined media
Cited by: 10
Author(s): Yanqiu Wang, Na Qin, Xihe Li, Wee-Wei Tee, Baojiang Wu, Siqin Bao
Software Mentions: 2
Published: over 4 years ago

10.1111/cei.13194

From stability to dynamics: understanding molecular mechanisms of regulatory T cells through <i>Foxp3</i> transcriptional dynamics
Cited by: 15
Author(s): David Bending, M. Ono
Software Mentions: 2
Published: about 7 years ago

10.1186/s12014-020-09290-x

Using phosphoproteomics data to understand cellular signaling: a comprehensive guide to bioinformatics resources
Cited by: 25
Author(s): Sara R. Savage, Bing Zhang
Software Mentions: 2
Published: over 5 years ago

10.1002/ctm2.187

Tumor microenvironment characterization in head and neck squamous carcinoma reveals distinct genomic alterations and clinical outcomes
Cited by: 2
Author(s): Run Shi, Xuanwen Bao, Jing Sun, Shun Lü, Claus Belka, Minglun Li
Software Mentions: 2
Published: about 5 years ago

10.1186/s40169-017-0174-1

Post‐zygotic genomic changes in glutamate and dopamine pathway genes may explain discordance of monozygotic twins for schizophrenia
Cited by: 11
Author(s): Christina A Castellani, M.G. Melka, Jane L. Gui, Anthony J. Gallo, Richard O’Reilly, Shiva M. Singh
Software Mentions: 2
Published: about 8 years ago

10.1002/ctm2.325

Integrative lncRNA–mRNA co‐expression network analysis identifies novel lncRNA E2F3‐IT1 for rheumatoid arthritis
Cited by: 6
Author(s): Long‐Fei Wu, Xing‐Bo Mo, Jin-Bo He, Pei He, Xin Lu, Hong‐Wen Deng, Fei‐Yan Deng, Shu‐Feng Lei
Software Mentions: 2
Published: almost 5 years ago

10.1038/s42003-020-0821-8

New insight into the molecular mechanism of colour differentiation among floral segments in orchids
Cited by: 60
Author(s): Bai Jun Li, Bao Qiang Zheng, Jie Yu Wang, Wen Chieh Tsai, Hsiao‐Chi Lu, Long−Hai Zou, Wei Xiao, Di Yang Zhang, Hong Juan Qiao, Zhong‐Jian Liu, Yan Wang
Software Mentions: 2
Published: almost 6 years ago

10.1038/s42003-019-0618-9

Single-cell RNA-sequencing analysis of estrogen- and endocrine-disrupting chemical-induced reorganization of mouse mammary gland
Cited by: 28
Author(s): Noriko Kanaya, Gregory Chang, Xiwei Wu, Kohei Saeki, Lauren Bernal, Hyun-Jeong Shim, Jinhui Wang, Charles Warden, Takuro Yamamoto, Jay Li, June-Soo Park, Timothy W. Synold, Steve Vonderfecht, Michele Rakoff, Susan L. Neuhausen, Shiuan Chen
Software Mentions: 2
Published: about 6 years ago

10.1038/s42003-020-1009-y

Population genomics of Staphylococcus pseudintermedius in companion animals in the United States
Cited by: 23
Author(s): Joshua T. Smith, Sharlene Amador, Colin J. McGonagle, David B. Needle, R. J. Gibson, Cheryl P. Andam
Software Mentions: 2
Published: over 5 years ago

10.1155/2007/58253

Canonical Decomposition of Ictal Scalp EEG and Accurate Source Localisation: Principles and Simulation Study
Cited by: 36
Author(s): Maarten De Vos, Lieven De Lathauwer, Bart Vanrumste, Sabine Van Huffel, Wim Van Paesschen
Software Mentions: 2
Published: almost 19 years ago

10.1155/2021/5511598

The Gene Coexpression Analysis Identifies Functional Modules Dynamically Changed After Traumatic Brain Injury
Cited by: 3
Author(s): Zhi-hui Zhao, Dong-po Wei, Ruizhe Zheng, Tinghua Peng, Xiang Xiao, Fusheng Li
Software Mentions: 2
Published: over 4 years ago

10.1186/s12962-018-0124-9

Combining A4R and MCDA in priority setting for health
Cited by: 4
Author(s): Norman Daniels
Software Mentions: 2
Published: about 7 years ago

10.1016/j.coisb.2019.04.002

Footprint-based functional analysis of multiomic data
Cited by: 32
Author(s): Aurélien Dugourd, Julio Sáez-Rodríguez
Software Mentions: 2
Published: over 6 years ago

10.1007/s11926-019-0810-4

New Attempts to Define and Clarify Lupus
Cited by: 18
Author(s): Marta E. Alarcón‐Riquelme
Software Mentions: 2
Published: almost 7 years ago

10.1093/database/bau030

'In silico expression analysis', a novel PathoPlant web tool to identify abiotic and biotic stress conditions associated with specific cis-regulatory sequences
Cited by: 18
Author(s): Julio C. Bolívar, Fabian Machens, Yuri Brill, Artyom Romanov, Lorenz Bülow, Reinhard Hehl
Software Mentions: 2
Published: over 11 years ago

10.1007/s00125-020-05107-6

Metabolic alterations in immune cells associate with progression to type 1 diabetes
Cited by: 37
Author(s): Partho Sen, Alex M. Dickens, M.A. López-Bascón, Tuomas Lindeman, Esko Kemppainen, Santosh Lamichhane, Tuukka Rönkkö, Jorma Ilonen, Jorma Toppari, Riitta Veijola, Heikki Hyöty, Tuulia Hyötyläinen, Mikael Knip, Matej Orešič
Software Mentions: 2
Published: almost 6 years ago

10.3390/diagnostics10080598

Somatostatin Receptor PET/CT Imaging for the Detection and Staging of Pancreatic NET: A Systematic Review and Meta-Analysis
Cited by: 25
Author(s): Matteo Bauckneht, Domenico Albano, Salvatore Annunziata, Giulia Santo, Priscilla Guglielmo, Viviana Frantellizzi, Alessia Branca, Cristina Ferrari, Alessandro Vento, Alessia Mirabile, Anna Nappi, Laura Evangelista, Pierpaolo Alongi, Riccardo Laudicella
Software Mentions: 2
Published: over 5 years ago

10.1155/2019/3491852

Metabolomics Analysis in Serum from Patients with Colorectal Polyp and Colorectal Cancer by ¹H-NMR Spectrometry
Cited by: 51
Author(s): Jinping Gu, Yaqing Xiao, Dan Shu, Xianrui Liang, Xiaomin Hu, Yuanyuan Xie, Donghai Lin, Hua Li
Software Mentions: 2
Published: over 6 years ago

10.1242/dmm.039578

Reversion of tumor hepatocytes to normal hepatocytes during liver tumor regression in an oncogene transgenic zebrafish model
Cited by: 12
Author(s): Yan Li, Ira Agrawal, Zhiyuan Gong
Software Mentions: 2
Published: almost 7 years ago

10.1242/dmm.033043

SIL1, the ER Hsp70 co-chaperone, plays a critical role in maintaining skeletal muscle proteostasis and physiology
Cited by: 13
Author(s): Viraj P. Ichhaporia, Jieun Kim, Kanisha Kavdia, Peter Vogel, Linda H. Horner, Sharon Frase, Linda M. Hendershot
Software Mentions: 2
Published: almost 8 years ago

10.1242/dmm.017889

Acute upregulation of hedgehog signaling in mice causes differential effects on cranial morphology
Cited by: 11
Author(s): Nandini Singh, Tara Dutka, Benjamin Devenney, Kazuhiko Kawasaki, Roger H. Reeves, Joan T. Richtsmeier
Software Mentions: 2
Published: almost 11 years ago

10.1002/emmm.201302558

Triple negative breast cancer initiating cell subsets differ in functional and molecular characteristics and in γ‐secretase inhibitor drug responses
Cited by: 58
Author(s): Diana J. Azzam, Dekuang Zhao, Junjun Sun, Andy J. Minn, Prathibha Ranganathan, Katherine Drews-Elger, Xiaoqing Han, Manuel Picón-Ruiz, Candace A. Gilbert, Seth A. Wander, Anthony J. Capobianco, Dorraya El-Ashry, Joyce M. Slingerland
Software Mentions: 2
Published: over 12 years ago

10.1002/embr.201337642

Extensive regulation of the non‐coding transcriptome by hypoxia: role of <scp>HIF</scp> in releasing paused <scp>RNA</scp> pol2
Cited by: 138
Author(s): Hani Choudhry, Johannes Schödel, Spyros Oikonomopoulos, Carme Camps, Steffen Grampp, Adrian L. Harris, Peter J. Ratcliffe, Jiannis Ragoussis, David R. Mole
Software Mentions: 2
Published: almost 12 years ago

10.1002/ece3.5381

Drift versus selection as drivers of phenotypic divergence at small spatial scales: The case of Belgjarskógur threespine stickleback
Cited by: 10
Author(s): Mathew Seymour, Katja Räsänen, Bjarni K. Kristjánsson
Software Mentions: 2
Published: over 6 years ago

10.1002/ece3.7107

The influence of nutrient enrichment on riverine food web function and stability
Cited by: 10
Author(s): Adam D. Canning, Russell G. Death
Software Mentions: 2
Published: almost 5 years ago

10.1002/ece3.2648

Morphological divergence of lake and stream<i>Phoxinus</i>of Northern Italy and the Danube basin based on geometric morphometric analysis
Cited by: 24
Author(s): David Ramler, Anja Palandačić, Giovanni B. Delmastro, Josef Wanzenböck, Harald Ahnelt
Software Mentions: 2
Published: almost 9 years ago

10.1002/ece3.6762

Genetic diversity, population structure, and gene flow analysis of lowland bamboo [<i>Oxytenanthera abyssinica</i> (A. Rich.) Munro] in Ethiopia
Cited by: 16
Author(s): Oumer Abdie Oumer, Kifle Dagne, Tileye Feyissa, Kassahun Tesfaye, Jayaraman Durai, Muhammad Zeeshan Hyder
Software Mentions: 2
Published: about 5 years ago

10.3390/e22091030

TMEA: A Thermodynamically Motivated Framework for Functional Characterization of Biological Responses to System Acclimation
Cited by: 5
Author(s): Kevin Schneider, Benedikt Venn, Timo Mühlhaus
Software Mentions: 2
Published: about 5 years ago

10.3390/e20080576

Optimal Placement of Pressure Gauges for Water Distribution Networks Using Entropy Theory Based on Pressure Dependent Hydraulic Simulation
Cited by: 6
Author(s): Do Guen Yoo, Dong Eil Chang, Song Yangho, Jung Ho Lee
Software Mentions: 2
Published: over 7 years ago

10.1289/ehp.10216

Nanosize Titanium Dioxide Stimulates Reactive Oxygen Species in Brain Microglia and Damages Neurons <i>in Vitro</i>
Cited by: 399
Author(s): Thomas Long, Julianne Tajuba, Preethi Sama, Navid B. Saleh, Carol D. Swartz, Joel Parker, Susan Hester, Gregory V. Lowry, Bellina Veronesi
Software Mentions: 2
Published: about 18 years ago

10.1186/s12199-021-00932-6

Replacing school and out-of-school sedentary behaviors with physical activity and its associations with adiposity in children and adolescents: a compositional isotemporal substitution analysis
Cited by: 15
Author(s): Aleš Gába, Jan Dygrýn, Nikola Štefelová, Lukáš Rubín, Karel Hron, Lukáš Jakubec
Software Mentions: 2
Published: almost 5 years ago

10.1021/acs.est.0c02387

Log Mean Divisia Index Decomposition Analysis of the Demand for Building Materials: Application to Concrete, Dwellings, and the U.K.
Cited by: 10
Author(s): He He, Rupert J. Myers
Software Mentions: 2
Published: almost 5 years ago

10.1186/s13072-019-0310-9

Virtual methylome dissection facilitated by single-cell analyses
Cited by: 3
Author(s): Liduo Yin, Ye Luo, Xiguang Xu, Shiyu Wen, Xiaowei Wu, Xuemei Lu, Hehuang Xie
Software Mentions: 2
Published: about 6 years ago

10.3390/epigenomes4040024

Simplified MethylRAD Sequencing to Detect Changes in DNA Methylation at Enhancer Elements in Differentiating Embryonic Stem Cells
Cited by: 3
Author(s): Debapriya Saha, Allison B Norvil, Nadia A. Lanman, Humaira Gowher
Software Mentions: 2
Published: about 5 years ago

10.1093/emph/eoaa003

Spondylolysis and spinal adaptations for bipedalism
Cited by: 8
Author(s): Kimberly A. Plomp, Keith Dobney, Mark Collard
Software Mentions: 2
Published: almost 6 years ago

10.3892/etm.2013.1392

A study exploring critical pathways in clear cell renal cell carcinoma
Cited by: 12
Author(s): Zisan Zeng, Tengcheng Que, Jiange Zhang, Yanling Hu
Software Mentions: 2
Published: about 12 years ago

10.3389/fbioe.2020.00239

Current Status and Future Prospects of Genome-Scale Metabolic Modeling to Optimize the Use of Mesenchymal Stem Cells in Regenerative Medicine
Cited by: 11
Author(s): Þóra Björg Sigmarsdóttir, Sarah McGarrity, Óttar Rolfsson, James T. Yurkovich, Ólafur E. Sigurjónsson
Software Mentions: 2
Published: over 5 years ago

10.3389/fcell.2020.604627

Identification of a Gene Signature for Renal Cell Carcinoma–Associated Fibroblasts Mediating Cancer Progression and Affecting Prognosis
Cited by: 24
Author(s): Bitian Liu, Xiaonan Chen, Yunhong Zhan, Bin Wu, Pan Shen
Software Mentions: 2
Published: almost 5 years ago

10.3389/fcell.2021.622519

Connecting the Dots: Resolving the Bone Marrow Niche Heterogeneity
Cited by: 41
Author(s): Igor Dolgalev, Anastasia Tikhonova
Software Mentions: 2
Published: over 4 years ago

10.3389/fcell.2020.581919

PAQR3 Inhibits Non-small Cell Lung Cancer Growth by Regulating the NF-κB/p53/Bax Axis
Cited by: 17
Author(s): Qiang Guo, Xixian Ke, Shixu Fang, Wen Gao, Yimin Song, Cheng Chen, Haojie Lu, Gang Xu
Software Mentions: 2
Published: about 5 years ago

10.3389/fcell.2020.626011

Effect of Metformin on Cardiac Metabolism and Longevity in Aged Female Mice
Cited by: 19
Author(s): Xudong Zhu, Wen Zen Shen, Zhu Liu, Shihao Sheng, Wei Xiong, Ruikun He, Xuguang Zhang, Likun Ma, Zhenyu Ju
Software Mentions: 2
Published: almost 5 years ago

10.3389/fcell.2020.608969

Age and Mutations as Predictors of the Response to Immunotherapy in Head and Neck Squamous Cell Cancer
Cited by: 24
Author(s): Yueming Zhang, Anqi Lin, Yonghe Li, Weimin Ding, Hua Meng, Peng Luo, Jian Zhang
Software Mentions: 2
Published: almost 5 years ago

10.3389/fcell.2021.606106

Identification of Biomarkers Related to CD8+ T Cell Infiltration With Gene Co-expression Network in Lung Squamous Cell Carcinoma
Cited by: 10
Author(s): Min Tang, Yukun Li, Xianyu Luo, Jianru Xiao, Juan Wang, Xiaofeng Zeng, Qi-hao Hu, Xiaoyan Chen, Sijie Tan, Jun Hu
Software Mentions: 2
Published: over 4 years ago

10.3389/fendo.2020.621944

Quinolinate Phosphoribosyltransferase Promotes Invasiveness of Breast Cancer Through Myosin Light Chain Phosphorylation
Cited by: 17
Author(s): Chien‐Liang Liu, Shih‐Ping Cheng, Ming‐Jen Chen, Chin-Ho Lin, Shan-Na Chen, Yi-Hue Kuo, Yuan‐Ching Chang
Software Mentions: 2
Published: almost 5 years ago

10.3389/fgene.2021.628041

Effects of Monochromatic Lighting During Incubation and Vaccination on the Splenic Transcriptome Profiles of Chicken
Cited by: 3
Author(s): Mohamed M. Ibrahim, Jill R. Nelson, Gregory S. Archer, Giridhar Athrey
Software Mentions: 2
Published: over 4 years ago

10.3389/fgene.2019.01187

Identification of Microenvironment-Related Prognostic Genes in Bladder Cancer Based on Gene Expression Profile
Cited by: 31
Author(s): Yongxiang Luo, Guohua Zeng, Song Wu
Software Mentions: 2
Published: about 6 years ago

10.3389/fgene.2020.590475

Identification and Expression Analysis of Long Non-coding RNA in Large Yellow Croaker (Larimichthys crocea) in Response to Cryptocaryon irritans Infection
Cited by: 12
Author(s): Xinyi Zhang, Tao Zhou, Baohua Chen, Haili Bai, Yulin Bai, Ji Zhao, Fei Pu, Yidi Wu, Chen Lin, You Shi, Qiaozhen Ke, Weiqiang Zheng, Jia Chen, Peng Xu
Software Mentions: 2
Published: about 5 years ago

10.3389/fgene.2019.00019

Systems Biology Approaches Toward Understanding Primary Mitochondrial Diseases
Cited by: 11
Author(s): Elaina M. Maldonado, F. Taha, Joyeeta Rahman, Shamima Rahman
Software Mentions: 2
Published: almost 7 years ago

10.3389/fgene.2021.577623

Gene Set Enrichment Analysis of Interaction Networks Weighted by Node Centrality
Cited by: 23
Author(s): Alessandra Zito, Marta Lualdi, Paola Granata, Dario Cocciadiferro, Antonio Novelli, Tiziana Alberio, Rosario Casalone, Mauro Fasano
Software Mentions: 2
Published: almost 5 years ago

10.3389/fgene.2021.647141

Multi-Omics Data Fusion via a Joint Kernel Learning Model for Cancer Subtype Discovery and Essential Gene Identification
Cited by: 10
Author(s): Jie Feng, Limin Jiang, Shuhao Li, Jijun Tang, Wen Li
Software Mentions: 2
Published: over 4 years ago

10.3389/fgene.2019.00633

FindTargetsWEB: A User-Friendly Tool for Identification of Potential Therapeutic Targets in Metabolic Networks of Bacteria
Cited by: 4
Author(s): Thiago Castanheira Merigueti, Marcia W. Carneiro, Ana Paula D'Allincourt Carvalho-Assef, Floriano Paes Silva, Fabrício Alves Barbosa Silva
Software Mentions: 2
Published: over 6 years ago

10.3389/fgene.2020.526309

Comparative Transcriptome Analyses of Longissimus thoracis Between Pig Breeds Differing in Muscle Characteristics
Cited by: 9
Author(s): Chunbo Cai, Meng Li, Yanwei Zhang, Shu Meng, Yang Yang, Pengfei Gao, Xiaohong Guo, Guoqing Cao
Software Mentions: 2
Published: about 5 years ago

10.3389/fgene.2021.701405

Cox-sMBPLS: An Algorithm for Disease Survival Prediction and Multi-Omics Module Discovery Incorporating Cis-Regulatory Quantitative Effects
Cited by: 0
Author(s): Nasim Vahabi, Caitrin W. McDonough, Ankit A. Desai, Larisa H. Cavallari, Julio D. Duarte, George Michailidis
Software Mentions: 2
Published: over 4 years ago

10.3389/fgene.2020.617136

Revealing the Interactions Between Diabetes, Diabetes-Related Diseases, and Cancers Based on the Network Connectivity of Their Related Genes
Cited by: 1
Author(s): Lijuan Zhu, Xu Ju, Qiuling Wang, Ailan Wang, Chao Li, Geng Tian, Huajun Zhang, Size Chen
Software Mentions: 2
Published: almost 5 years ago

10.3389/fgene.2021.640951

Explore the Underlying Mechanism Between Atopic Dermatitis and Major Depressive Disorder
Cited by: 2
Author(s): Tao Yang, Xuehua Huang, Jiajun Xu, Mingjing Situ, Qingqing Xiao, Kamil Can Kural, Yan Kang
Software Mentions: 2
Published: over 4 years ago

10.3389/fgene.2018.00590

PlantEAR: Functional Analysis Platform for Plant EAR Motif-Containing Proteins
Cited by: 34
Author(s): Jiaotong Yang, Yue Liu, Hengyu Yan, Tian Tian, Qi You, Liwei Zhang, Wenying Xu, Zhen Su
Software Mentions: 2
Published: almost 7 years ago

10.3389/fgene.2020.00070

Hippocampal DNA Methylation in a Mouse Model of Fetal Alcohol Spectrum Disorder That Includes Maternal Separation Stress Only Partially Explains Changes in Gene Expression
Cited by: 11
Author(s): Bonnie Alberry, Shiva M. Singh
Software Mentions: 2
Published: almost 6 years ago

10.3389/fnhum.2015.00421

Basal ganglia and cortical networks for sequential ordering and rhythm of complex movements
Cited by: 21
Author(s): Jeffery G. Bednark, Megan E. J. Campbell, Ross Cunnington
Software Mentions: 2
Published: over 10 years ago

10.3389/fnhum.2017.00650

Categorization for Faces and Tools—Two Classes of Objects Shaped by Different Experience—Differs in Processing Timing, Brain Areas Involved, and Repetition Effects
Cited by: 6
Author(s): Vladimir V. Kozunov, Anastasia Nikolaeva, Tatiana A. Stroganova
Software Mentions: 2
Published: almost 8 years ago

10.3389/fimmu.2021.701656

The Transcriptomic Profile of Monocytes from Patients With Sjögren’s Syndrome Is Associated With Inflammatory Parameters and Is Mimicked by Circulating Mediators
Cited by: 11
Author(s): Ana P Lopes, Cornelis P. J. Bekker, Maarten R Hillen, Sofie L M Blokland, Anneline C. Hinrichs, Aridaman Pandit, Aike A. Kruize, Timothy R D J Radstake, Joël A G van Roon
Software Mentions: 2
Published: over 4 years ago

10.3389/fimmu.2020.00816

EpitoCore: Mining Conserved Epitope Vaccine Candidates in the Core Proteome of Multiple Bacteria Strains
Cited by: 5
Author(s): Tayna S. Fiuza, J. A. S. Lima, Gustavo Souza
Software Mentions: 2
Published: over 5 years ago

10.3389/fimmu.2019.01087

Systems Immunology Characterization of Novel Vaccine Formulations for Mycoplasma hyopneumoniae Bacterins
Cited by: 28
Author(s): Anneleen Matthijs, Gaël Auray, Virginie Jakob, Obdulio García-Nicolás, Roman Othmar Braun, Irene Keller, Rémy Bruggman, Bert Devriendt, Filip Boyen, Carlos A. Guzmán, Annelies Michiels, Freddy Haesebrouck, Nicolas Collin, Christophe Barnier-Quer, Dominiek Maes, Artur Summerfield
Software Mentions: 2
Published: over 6 years ago

10.3389/fimmu.2017.00557

Predicting RTS,S Vaccine-Mediated Protection from Transcriptomes in a Malaria-Challenge Clinical Trial
Cited by: 49
Author(s): Robert A. van den Berg, Margherita Coccia, W. Ripley Ballou, Kent E. Kester, Christian F. Ockenhouse, Johan Vekemans, Erik Jongert, Arnaud M. Didierlaurent, Robbert G. van der Most
Software Mentions: 2
Published: over 8 years ago

10.3389/fmicb.2018.01496

Influenza Virus Segment Composition Influences Viral Stability in the Environment
Cited by: 14
Author(s): Thomas Labadie, Christophe Batéjat, Jean-Claude Manuguerra, India Leclercq
Software Mentions: 2
Published: over 7 years ago

10.3389/fmicb.2021.661798

Global Expansion of Linezolid-Resistant Coagulase-Negative Staphylococci
Cited by: 8
Author(s): Vladimir Gostev, Semen A. Leyn, Alexander Kruglov, Daria Likholetova, Olga Kalinogorskaya, Marina Baykina, Н. В. Дмитриева, Z. V. Grigorievskaya, Tatiana V. Priputnevich, L A Lyubasovskaya, Alexey B. Gordeev, С В Сидоренко
Software Mentions: 2
Published: about 4 years ago

10.3389/fmicb.2019.00440

Comparative Metabonomic Investigations of Schistosoma japonicum From SCID Mice and BALB/c Mice: Clues to Developmental Abnormality of Schistosome in the Immunodeficient Host
Cited by: 12
Author(s): Rong Liu, Wenjun Cheng, Hongliang Tang, Qian Zhong, Zhenping Ming, Hui-Fen Dong
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2020.577497

An Educational Bioinformatics Project to Improve Genome Annotation
Cited by: 5
Author(s): Zoie Amatore, Susan C. Gunn, Laura Harris
Software Mentions: 2
Published: almost 5 years ago

10.3389/fmicb.2014.00406

Spatial patterns and links between microbial community composition and function in cyanobacterial mats
Cited by: 15
Author(s): Mohammad A. A. Al-Najjar, Alban Ramette, Michael Kühl, Waleed Hamza, Judith M. Klatt, Lùbos Polerecký
Software Mentions: 2
Published: over 11 years ago

10.3389/fmicb.2021.623739

Probiotics Bacillus licheniformis Improves Intestinal Health of Subclinical Necrotic Enteritis-Challenged Broilers
Cited by: 29
Author(s): Liugang Kan, Fangshen Guo, Yan Liu, Van Hieu Pham, Yuming Guo, Weihong Zhong
Software Mentions: 2
Published: over 4 years ago

10.3389/fmicb.2021.626759

Phylogenetic Revision of the Genus Aliivibrio: Intra- and Inter-Species Variance Among Clusters Suggest a Wider Diversity of Species
Cited by: 6
Author(s): Terje Klemetsen, Christian Karlsen, Nils Peder Willassen
Software Mentions: 2
Published: almost 5 years ago

10.3389/fmolb.2021.727481

Characterization of METTL7B to Evaluate TME and Predict Prognosis by Integrative Analysis of Multi-Omics Data in Glioma
Cited by: 8
Author(s): Xiaochuan Chen, Chao Li, Ying Liu, Shihong Wu, Wei Liu, Ting Lin, Miaomiao Li, Youliang Weng, Wanzun Lin, Sufang Qiu
Software Mentions: 2
Published: about 4 years ago

10.3389/fmolb.2021.673044

Altered Glycosylation in the Aging Heart
Cited by: 6
Author(s): Patricia Franzka, Lynn Krüger, Mona K Schurig, Maja Olecka, Steve Hoffmann, Véronique Blanchard, Christian A. Hübner
Software Mentions: 2
Published: over 4 years ago

10.3389/fnins.2019.01033

Enzymatic Digestion of Hyaluronan-Based Brain Extracellular Matrix in vivo Can Induce Seizures in Neonatal Mice
Cited by: 12
Author(s): Alena Balashova, Vladimir Pershin, Olga Zaborskaya, Natalia Tkachenko, Andrey Mironov, Evgenii L. Guryev, Л. К. Курбатов, Murat R. Gainullin, И.В. Мухина
Software Mentions: 2
Published: about 6 years ago

10.3389/fnins.2020.00479

Birth Weight and Stroke in Adult Life: Genetic Correlation and Causal Inference With Genome-Wide Association Data Sets
Cited by: 11
Author(s): Ting Wang, Zaixiang Tang, Xinghao Yu, Yixing Gao, Fengjun Guan, Bai Wei, Shuiping Huang, Junnian Zheng, Ping Zeng
Software Mentions: 2
Published: over 5 years ago

10.3389/fonc.2021.697534

Multi-Omics Analysis of the Expression and Prognosis for FKBP Gene Family in Renal Cancer
Cited by: 9
Author(s): Zeqiang Sun, Qin Xin, Fang Juan-juan, Yongxin Tang, Yi‐Ming Fan
Software Mentions: 2
Published: over 4 years ago

10.3389/fonc.2019.00291

Identification of RE1-Silencing Transcription Factor as a Promoter of Metastasis in Pancreatic Cancer
Cited by: 6
Author(s): Haoyi Jin, Peng Liu, Lingming Kong, Xiang Fei, Yang Gao, Tianyu Wu, Defeng Sun
Software Mentions: 2
Published: over 6 years ago

10.3389/fonc.2019.01446

LDHA Promotes Oral Squamous Cell Carcinoma Progression Through Facilitating Glycolysis and Epithelial–Mesenchymal Transition
Cited by: 60
Author(s): Hao Cai, Jiaxin Li, Yadong Zhang, Yan Liao, Yue Zhu, Cheng Wang, Jinsong Hou
Software Mentions: 2
Published: almost 6 years ago

10.3389/fonc.2020.572919

Identification of a Transcriptional Prognostic Signature From Five Metabolic Pathways in Oral Squamous Cell Carcinoma
Cited by: 9
Author(s): Xiang Wu, Yuan Yao, Zhongwu Li, Huan Ge, Dongmiao Wang, Yanling Wang
Software Mentions: 2
Published: almost 5 years ago

10.3389/fonc.2021.668424

Selenite Induces Cell Cycle Arrest and Apoptosis via Reactive Oxygen Species-Dependent Inhibition of the AKT/mTOR Pathway in Thyroid Cancer
Cited by: 8
Author(s): Zhen Cheng, Shuang Yu, Weiman He, Jie Li, Tianyi Xu, Junyu Xue, Peijie Shi, Shuwei Chen, Yanbing Li, Shubin Hong, Haipeng Xiao
Software Mentions: 2
Published: over 4 years ago

10.3389/fonc.2021.619517

Establishment of a Macrophage Phenotypic Switch Related Prognostic Signature in Patients With Pancreatic Cancer
Cited by: 12
Author(s): Muxing Li, Hangyan Wang, Chunhui Yuan, Zhaolai Ma, Bin Jiang, Lei Li, Li Zhang, Dianrong Xiu
Software Mentions: 2
Published: over 4 years ago

10.3389/fonc.2019.01325

Novel Breast-Specific Long Non-coding RNA LINC00993 Acts as a Tumor Suppressor in Triple-Negative Breast Cancer
Cited by: 25
Author(s): Shipeng Guo, Jiang Lei, Kai Tao, Chen Chen, Haochen Yu, Shengchun Liu
Software Mentions: 2
Published: almost 6 years ago

10.3389/fonc.2020.575657

Translating Preclinical Research for Exercise Oncology: Take It to the VO2max
Cited by: 3
Author(s): Donald M. Lamkin, Theodore Garland
Software Mentions: 2
Published: about 5 years ago

10.3389/fonc.2019.00310

Overexpression of ASPM, CDC20, and TTK Confer a Poorer Prognosis in Breast Cancer Identified by Gene Co-expression Network Analysis
Cited by: 50
Author(s): Jianing Tang, Mengxin Lü, Qiuxia Cui, Dan Zhang, Deguang Kong, Xing Liao, Jiangbo Ren, Yan Gong
Software Mentions: 2
Published: over 6 years ago

10.3389/fonc.2021.631943

Hepatic Steatosis Predicts Higher Incidence of Recurrence in Colorectal Cancer Liver Metastasis Patients
Cited by: 7
Author(s): Haiyan Chen, Siqi Dai, Yunxia Fang, Liubo Chen, Kai Jiang, Qichun Wei, Kefeng Ding
Software Mentions: 2
Published: over 4 years ago

10.3389/fonc.2021.636591

Molecular Classification Based on Prognostic and Cell Cycle-Associated Genes in Patients With Colon Cancer
Cited by: 7
Author(s): Zhiyuan Zhang, Meiling Ji, Jie Li, Qi Wu, Yuesheng Huang, Guodong He, Jiacheng Xu
Software Mentions: 2
Published: over 4 years ago

10.3389/fonc.2020.584683

Multiple Myeloma Cells Alter Adipogenesis, Increase Senescence-Related and Inflammatory Gene Transcript Expression, and Alter Metabolism in Preadipocytes
Cited by: 19
Author(s): Heather Fairfield, Samantha Costa, Carolyne Falank, Mariah Farrell, Connor Murphy, Anastasia D’Amico, Heather Driscoll, Michaela R. Reagan
Software Mentions: 2
Published: almost 5 years ago

10.3389/fphar.2020.00952

Hypo-Osmotic Loading Induces Expression of IL-6 in Nucleus Pulposus Cells of the Intervertebral Disc Independent of TRPV4 and TRPM7
Cited by: 8
Author(s): Aleksandra Sadowska, Birsen Altinay, Wolfgang Hitzl, Stephen J. Ferguson, Karin Wuertz‐Kozak
Software Mentions: 2
Published: over 5 years ago

10.3389/fphar.2019.01310

Probing the Druggablility on the Interface of the Protein–Protein Interaction and Its Allosteric Regulation Mechanism on the Drug Screening for the CXCR4 Homodimer
Cited by: 5
Author(s): Liting Shen, Yuan Yuan, Yanzhi Guo, Menglong Li, Chuan Li, Xuemei Pu
Software Mentions: 2
Published: about 6 years ago

10.3389/fphar.2020.00357

Prospective Risk Assessment of Medicine Shortages in Europe and Israel: Findings and Implications
Cited by: 21
Author(s): Nenad Miljković, Brian Godman, Milena Kovačević, Piera Polidori, L Tzimis, Torsten Hoppe-Tichy, M. Saar, Ioan Antofie, L Horváth, Thomas De Rijdt, Róbert György Vida, Elena Kkolou, David Preece, Biljana Tubić, Joan Peppard, Alicia Martínez, Cristina García Yubero, Raymond N. Haddad, Dragana Rajinac, Pavle Zelić, Helena Jenzer, Franci Tartar, Gunda Gitler, Martina Jeske, M Davidescu, Guillaume Béraud, Darija Kuruc-Poje, Kristine Sakstrup Haag, Hanne Fischer, Inese Sviestiņa, Gordana Ljubojević, Anne Markestad, Vesna Vujić‐Aleksić, Lana Nežić, Anica Crkvenčić, Johanna Linnolahti, Bogdan Ašanin, Nataša Duborija-Kovačević, Tomasz Bochenek, Isabelle Huys, Branislava Miljković
Software Mentions: 2
Published: over 5 years ago