Projects: pypi: amptk
https://packages.ecosyste.ms/registries/pypi.org/packages/amptk
AMPtk: amplicon tool kit
10 versions
Latest release: over 3 years ago
68 downloads last month
Enhanced Analysis
Educational Contributors:
jon@calvisitor-10-105-185-148.calvisitor.1918.berkeley.edu
jason.stajich@ucr.edu
Repository Activity:
Repository Owner:
Jon Palmer (user)
README Analysis:
DOI Found
Science Score: 100/100
Starting Score: 100 points
Bonuses:
-
+40
Educational commit emails
2 contributors with educational email addresses -
+10
DOI references
1 DOI references found in README
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem -
-10
No science terms in description
No scientific terms found in description
Very Likely Science (100)
Papers Mentioning amptk 4
10.7717/peerj.4925
Non-biological synthetic spike-in controls and the AMPtk software pipeline improve mycobiome dataCited by: 166
Author(s): Jonathan M. Palmer, Michelle A. Jusino, Mark T. Banik, Daniel L. Lindner
Software Mentions: 8
Published: about 8 years ago
10.1186/s40168-017-0347-6
Microbes and associated soluble and volatile chemicals on periodically wet household surfacesCited by: 43
Author(s): Rachel I. Adams, Despoina S. Lymperopoulou, Pawel K. Misztal, Rita de Cássia Pessotti, Scott W. Behie, Yilin Tian, Allen H. Goldstein, Steven E. Lindow, William W. Nazaroff, John W. Taylor, Matthew F. Traxler, Thomas D. Bruns
Software Mentions: 3
Published: almost 9 years ago
10.1371/journal.pntd.0006842
A single test approach for accurate and sensitive detection and taxonomic characterization of Trypanosomes by comprehensive analysis of internal transcribed spacer 1 ampliconsCited by: 25
Author(s): Alex Kiarie Gaithuma, Junya Yamagishi, Axel Martinelli, Kyoko Hayashida, Nobuyoshi Kawai, Megasari Marsela, Chihiro Sugimoto
Software Mentions: 1
Published: over 7 years ago
10.3389/fvets.2021.599815
Genetic Diversity of African Trypanosomes in Tsetse Flies and Cattle From the Kafue EcosystemCited by: 6
Author(s): Yoshinari Nakamura, Kentaro Hayashida, Victoire Delesalle, Yongjin Qiu, Ryosuke Omori, Martin Simuunza, Chihiro Sugimoto, Boniface Namangala, Junya Yamagishi
Software Mentions: 1
Published: over 5 years ago