pypi: Zen | Projects | Ecosyste.ms: Papers

10.1038/s41419-018-0396-1

Epigenetic modifiers promote mitochondrial biogenesis and oxidative metabolism leading to enhanced differentiation of neuroprogenitor cells
Cited by: 25
Author(s): Martine Uittenbogaard, Christine A. Brantner, Anne Chiaramello
Software Mentions: 2
Published: over 6 years ago

10.1038/s41421-020-00204-7

Light-sheet fluorescence imaging charts the gastrula origin of vascular endothelial cells in early zebrafish embryos
Cited by: 11
Author(s): Meijun Pang, Linlu Bai, Weijian Zong, Xu Wang, Ye Bu, Connie Xiong, Jiyuan Zheng, Jieyi Li, Weizheng Gao, Zhiheng Feng, Liangyi Chen, Jue Zhang, Heping Cheng, Xiaojun Zhu, Jing-Wei Xiong
Software Mentions: 2
Published: about 4 years ago

10.1186/s13578-021-00571-y

Cooperative treatment effectiveness of ATR and HSP90 inhibition in Ewing’s sarcoma cells
Cited by: 8
Author(s): Christian Marx, Marc U. Schaarschmidt, Joanna Kirkpatrick, Lisa Marx-Blümel, Melisa Halilovic, Martin Westermann, Doerte Hoelzer, Felix Meyer, Yibo Geng, Katrin Buder, Hauke M. Schadwinkel, Kanstantsin Siniuk, Sabine Becker, René Thierbach, James F. Beck, Jürgen Sonnemann, Zhaoqi Wang
Software Mentions: 2
Published: over 3 years ago

10.1016/j.cell.2017.10.020

Lysophosphatidylcholine Regulates Sexual Stage Differentiation in the Human Malaria Parasite Plasmodium falciparum
Cited by: 220
Author(s): Nicolas M. B. Brancucci, Joseph P. Gerdt, ChengQi Wang, Mariana De Niz, Nisha Philip, Swamy Rakesh Adapa, Min Zhang, Eva Hitz, Igor Niederwieser, Sylwia D. Boltryk, Marie-Claude N. Laffitte, Martha A. Clark, Christof Grüring, Deepali Ravel, Alexandra Blancke Soares, Allison Demas, Selina Bopp, Belén Rubio‐Ruíz, Ana Conejo‐García, Dyann F. Wirth, Edyta Gendaszewska‐Darmach, Manoj T. Duraisingh, John Adams, Till S. Voss, Andrew P. Waters, Rays H. Y. Jiang, Jon Clardy, Matthias Marti
Software Mentions: 2
Published: almost 7 years ago

10.1186/s12964-020-00635-5

Differential regulation of rho GTPases during lung adenocarcinoma migration and invasion reveals a novel role of the tumor suppressor StarD13 in invadopodia regulation
Cited by: 16
Author(s): Maria Al Haddad, Rayane El-Rif, Samer Hanna, Leila Jaafar, Rayane Dennaoui, Sandra Abdellatef, Veronika Miskolci, Dianne Cox, Louis Hodgson, Mirvat El‐Sibai
Software Mentions: 2
Published: about 4 years ago

10.1007/s00018-020-03750-1

HIF1α is a direct regulator of steroidogenesis in the adrenal gland
Cited by: 13
Author(s): Deepika Watts, Johanna Stein, Ana Meneses, Nicole Bechmann, Aleš Neuwirth, Denise Kaden, Anja Krüger, Anupam Sinha, Vasileia Ismini Alexaki, Luis Gustavo Pérez-Rivas, Stefan Kircher, Antoine Martinez, Marily Theodoropoulou, Graeme Eisenhofer, Mirko Peitzsch, Ali El‐Armouche, Triantafyllos Chavakis, Ben Wielockx
Software Mentions: 2
Published: almost 4 years ago

10.3390/cancers11091250

Immune Heterogeneity Between Primary Tumors and Corresponding Metastatic Lesions and Response to Platinum Therapy in Primary Ovarian Cancer
Cited by: 15
Author(s): Katharina Dötzer, Friederike Schlüter, Markus Bo Schoenberg, Alexandr V. Bazhin, Franz Edler von Koch, Andreas Schnelzer, S. Anthuber, Dieter Grab, Bastian Czogalla, Alexander Burges, Jens Werner, Sven Mahner, Barbara Mayer
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0066918

Effect of Cell Shape and Dimensionality on Spindle Orientation and Mitotic Timing
Cited by: 16
Author(s): Mirren Charnley, Fabian Anderegg, René Holtackers, Marcus Textor, Patrick Meraldi
Software Mentions: 2
Published: over 11 years ago

10.1016/j.cell.2021.01.034

Antidepressant drugs act by directly binding to TRKB neurotrophin receptors
Cited by: 275
Author(s): Plínio Casarotto, Mykhailo Girych, Senem Merve Fred, Vera Kovaleva, Rafael Moliner, Giray Enkavi, Caroline Biojone, Cecilia Cannarozzo, Madhusmita Priyadarshini Sahu, Katja Kaurinkoski, Cecilia A. Brunello, Anna Steinzeig, Frederike Winkel, Sudarshan Patil, Stefan Vestring, Tsvetan Serchov, Cassiano Ricardo Alves Faria Diniz, Liina Laukkanen, Iseline Cardon, Hanna Antila, Tomasz Róg, Petteri Piepponen, Clive R. Bramham, Claus Normann, Sari E. Lauri, Märt Saarma, Ilpo Vattulainen, Eero Ċastrén
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0180871

Can single molecule localization microscopy be used to map closely spaced RGD nanodomains?
Cited by: 9
Author(s): Mahdie Mollazade, Thibault Tabarin, Philip R. Nicovich, Alexander H. Soeriyadi, Daniel J. Nieves, J. Justin Gooding, Katharina Gaus
Software Mentions: 2
Published: over 7 years ago

10.1186/s40478-019-0871-7

Synapse alterations precede neuronal damage and storage pathology in a human cerebral organoid model of CLN3-juvenile neuronal ceroid lipofuscinosis
Cited by: 38
Author(s): Gemma Gomez-Giro, Jonathan Arias, Javier Jarazo, Dagmar Zeuschner, Muhammad Ali, Nina Possemis, Silvia Bolognin, Rashi Halder, Christian Jäger, Willemijn F. E. Kuper, Peter M. van Hasselt, Holm Zaehres, Antonio del Sol, Herman van der Putten, Hans R. Schöler, Jens Christian Schwamborn
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0082083

Dendritic Branch Intersections Are Structurally Regulated Targets for Efficient Axonal Wiring and Synaptic Clustering
Cited by: 3
Author(s): Monika Pinchas, Danny Baranes
Software Mentions: 2
Published: almost 11 years ago

10.1016/j.cell.2020.05.018

An Autonomous Oscillation Times and Executes Centriole Biogenesis
Cited by: 27
Author(s): Mustafa G. Aydogan, Thomas L. Steinacker, Mohammad Mofatteh, Zachary M. Wilmott, Felix Zhou, Lisa Gartenmann, Alan Wainman, Saroj Saurya, Zsofia A. Novak, Siu‐Shing Wong, Alain Goriely, Michael A. Boemo, Jordan W. Raff
Software Mentions: 2
Published: over 4 years ago

10.1007/s00018-020-03467-1

The Rab5 activator RME-6 is required for amyloid precursor protein endocytosis depending on the YTSI motif
Cited by: 7
Author(s): Simone Eggert, Tomas Gruebl, Ritu Rajender, Carsten Rupp, Bianca Sander, Amelie Heesch, Marius Zimmermann, Sebastian Hoepfner, Hanswalter Zentgraf, Stefan Kins
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0249068

Lymphatic endothelial-cell expressed ACKR3 is dispensable for postnatal lymphangiogenesis and lymphatic drainage function in mice
Cited by: 6
Author(s): Elena C. Sigmund, Lilian Baur, Philipp Schineis, Jorge Arasa, Víctor Collado-Díaz, Martina Vranova, Rolf A.K. Stahl, Marcus Thelen, Cornelia Halin
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0235691

A pilot study investigating the effects of voluntary exercise on capillary stalling and cerebral blood flow in the APP/PS1 mouse model of Alzheimer’s disease
Cited by: 15
Author(s): Kaja Falkenhain, Nancy E. Ruiz-Uribe, Mohammad Haft‐Javaherian, Muhammad Ali, Stall Catchers, Pietro Michelucci, Chris B. Schaffer, Oliver Bracko
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0235360

Sodium–calcium exchanger 1 is the key molecule for urinary potassium excretion against acute hyperkalemia
Cited by: 6
Author(s): Wakana Shoda, Naohiro Nomura, Fumiaki Ando, Hideaki Tagashira, Takahiro Iwamoto, Akihito Ohta, Kiyoshi Isobe, Takayasu Mori, Koichiro Susa, Eisei Sohara, Tatemitsu Rai, Shinichi Uchida
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0136396

Identification of a Cryptic Bacterial Promoter in Mouse (mdr1a) P-Glycoprotein cDNA
Cited by: 5
Author(s): Kristen M. Pluchino, Dominic Esposito, Janna K. Moen, Matthew D. Hall, James P. Madigan, Suneet Shukla, Lauren V. Procter, Vanessa Wall, Thomas D. Schneider, Ian A. Pringle, Suresh V. Ambudkar, Deborah R. Gill, Stephen C. Hyde, Michael M. Gottesman
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0150320

Streptococcus pneumoniae Cell-Wall-Localized Phosphoenolpyruvate Protein Phosphotransferase Can Function as an Adhesin: Identification of Its Host Target Molecules and Evaluation of Its Potential as a Vaccine
Cited by: 14
Author(s): Yaffa Mizrachi Nebenzahl, Karin Blau, Tatyana Kushnir, Marilou Shagan, Maxim Portnoi, Avraham Cohen, Shalhevet Azriel, Itai Malka, Asad Adawi, Daniel Kafka, Shahar Dotan, Gali Guterman, Shany Troib, Tali Fishilevich, Jonathan M. Gershoni, Alex Braiman, Andrea M. Mitchell, Timothy J. Mitchell, Nurith Porat, Inna Goliand, Vered Chalifa‐Caspi, Edwin Swiatlo, Michael Tal, R. John Ellis, Natalie Elia, Ron Dagan
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0251474

Analysis of blood parameters and molecular endometrial markers during early reperfusion in two ovine models of uterus transplantation
Cited by: 3
Author(s): Marie Carbonnel, Nathalie Cornet, Aurélie Revaux, Angéline Favre-Inhofer, Laurent Galio, Mariam Raliou, Anne Couturier-Tarrade, Corinne Giraud-Delville, Gilles Charpigny, Valérie Gelin, Olivier Dubois, Barbara Hersant, Romain Bosc, Raphaël Coscas, François Vialard, Pascale Chavatte‐Palmer, Christophe Richard, Olivier Sandra, Jean Marc Ayoubi
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0200789

Eyes shut homolog is important for the maintenance of photoreceptor morphology and visual function in zebrafish
Cited by: 35
Author(s): Muriël Messchaert, Margo Dona, Sanne Broekman, Theo Peters, Julio C. Corral-Serrano, Ralph Slijkerman, Erwin van Wijk, Rob W.J. Collin
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0138381

The Role of ARF6 in Biliary Atresia
Cited by: 51
Author(s): Mylarappa Ningappa, Juhoon So, Joseph T. Glessner, Chethan Ashokkumar, Sarangarajan Ranganathan, Jin‐Young Min, Brandon W. Higgs, Qing Sun, Kimberly Haberman, Lori Schmitt, Sílvia Vilarinho, Pramod K. Mistry, Gerard Vockley, Anil Dhawan, George K. Gittes, Hákon Hákonarson, Ronald Jaffe, Shankar Subramaniam, Donghun Shin, Rakesh Sindhi
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0239176

Apoptosis in idiopathic inflammatory myopathies with partial invasion; a role for CD8+ cytotoxic T cells?
Cited by: 8
Author(s): Olof Danielsson, Bo Häggqvist, Liv Gröntoft, Karin Öllinger, Jan Ernerudh
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0182407

Protective effects on the retina after ranibizumab treatment in an ischemia model
Cited by: 23
Author(s): Stephanie C. Joachim, Marina Renner, Jacqueline Reinhard, Carsten Theiß, Caroline May, Stephanie Lohmann, Sabrina Reinehr, Gesa Stute, Andréas Faissner, Katrin Marcus, H. Burkhard Dick
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0144572

Supervised Machine Learning for Classification of the Electrophysiological Effects of Chronotropic Drugs on Human Induced Pluripotent Stem Cell-Derived Cardiomyocytes
Cited by: 25
Author(s): Christopher M. Heylman, Rupsa Datta, Agua Sobrino, Steven C. George, Enrico Gratton
Software Mentions: 2
Published: almost 9 years ago

10.3390/microorganisms7090352

The Architecture of Monospecific Microalgae Biofilms
Cited by: 23
Author(s): Andrea Fanesi, Armelle Paule, Olivier Bernard, Romain Briandet, Filipa Lopes
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0220019

The use of mixed collagen-Matrigel matrices of increasing complexity recapitulates the biphasic role of cell adhesion in cancer cell migration: ECM sensing, remodeling and forces at the leading edge of cancer invasion
Cited by: 56
Author(s): María Anguiano, Xabier Morales, Carlos Castilla, Andrés de la Peña, Cristina Ederra, Martín Martínez, Mikel Ariz, Maider Esparza, H. Amaveda, M. Mora, Nieves Movilla, José Manuel García Aznar, Iván Cortés‐Domínguez, Carlos Ortiz‐de‐Solórzano
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0246244

EZH2 inhibition decreases neuroblastoma proliferation and in vivo tumor growth
Cited by: 11
Author(s): Laura V. Bownes, Arthur Robin Williams, Raoud Marayati, Laura L. Stafman, Hooper R. Markert, Colin H. Quinn, Nikita Wadhwani, Jamie M. Aye, Jerry E. Stewart, Karina J. Yoon, Elizabeth Mroczek‐Musulman, Elizabeth A. Beierle
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0251273

Catalysis of the electrochemical oxygen reduction reaction (ORR) by animal and human cells
Cited by: 3
Author(s): Simon Guette-Marquet, Christine Roques, Alain Bergel
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0119864

Differential Dependence on N-Glycosylation of Anthrax Toxin Receptors CMG2 and TEM8
Cited by: 3
Author(s): Sarah Friebe, Julie Deuquet, F. Gisou van der Goot
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0136362

Proteins with Intrinsically Disordered Domains Are Preferentially Recruited to Polyglutamine Aggregates
Cited by: 30
Author(s): Maggie P. Wear, Dmitry Kryndushkin, Robert N. O’Meally, Jason L. Sonnenberg, Robert N. Cole, Frank Shewmaker
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0215908

Wild-type and SAMP8 mice show age-dependent changes in distinct stem cell compartments of the interfollicular epidermis
Cited by: 8
Author(s): Gopakumar Changarathil, Karina Ramírez, Hiroko Isoda, Aiko Sada, Hiromi Yanagisawa
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0073962

The Human Minor Histocompatibility Antigen1 Is a RhoGAP
Cited by: 28
Author(s): Bart Jan de Kreuk, Antje Schaefer, Eloise C. Anthony, Simon Tol, Mar Fernandez‐Borja, Dirk Geerts, J. Pool, Lothar Hambach, Els Goulmy, Peter L. Hordijk
Software Mentions: 2
Published: about 11 years ago

10.3390/mi9120660

Separation and Characterization of Prostate Cancer Cell Subtype according to Their Motility Using a Multi-Layer CiGiP Culture
Cited by: 9
Author(s): Linxiang Wang, Ying Zhou, Jingjing Fu, Zhisong Lu
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0226049

Loss of family with sequence similarity 13, member A exacerbates pulmonary hypertension through accelerating endothelial-to-mesenchymal transition
Cited by: 10
Author(s): Pranindya Rinastiti, Koji Ikeda, Elda Putri Rahardini, Kazuya Miyagawa, Naoki Tamada, Yuko Kuribayashi, Ken‐ichi Hirata, Noriaki Emoto
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0095248

The Kinematics of Cytotoxic Lymphocytes Influence Their Ability to Kill Target Cells
Cited by: 20
Author(s): Purnima Bhat, Graham R. Leggatt, Klaus I. Matthaei, Ian H. Frazer
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0042563

Rho GTPase Expression in Human Myeloid Cells
Cited by: 20
Author(s): Suzanne F. G. van Helden, Eloise C. Anthony, Rob Dee, Peter L. Hordijk
Software Mentions: 2
Published: over 12 years ago

10.1371/journal.pone.0053918

Profilin 1 as a Target for Cathepsin X Activity in Tumor Cells
Cited by: 30
Author(s): Urša Pečar Fonović, Zala Jevnikar, Matija Rojnik, Bojan Doljak, Marko Fonović, Polona Jamnik, Janko Kos
Software Mentions: 2
Published: almost 12 years ago

10.1371/journal.pone.0257495

Guiding cell adhesion and motility by modulating cross-linking and topographic properties of microgel arrays
Cited by: 3
Author(s): Janine Riegert, Alexander Töpel, Jana Schieren, Renee Coryn, Stella Dibenedetto, Dominik L. Braunmiller, Kamil K Zajt, Carmen Schalla, Stephan Rütten, Martin Zenke, Andrij Pich, Antonio Sechi
Software Mentions: 2
Published: about 3 years ago

10.1371/journal.pone.0148379

BioSig3D: High Content Screening of Three-Dimensional Cell Culture Models
Cited by: 18
Author(s): Cemal Cagatay Bilgin, Gerald Fontenay, Qingsu Cheng, Hang Chang, Ju Han, Bahram Parvin
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0064426

Crystal Structure of Crataeva tapia Bark Protein (CrataBL) and Its Effect in Human Prostate Cancer Cell Lines
Cited by: 19
Author(s): Rodrigo S. Ferreira, Dongwen Zhou, Joana Gasperazzo Ferreira, Mariana Cristina Cabral Silva, Rosemeire A. Silva-Lucca, Reinhard Mentele, Edgar Julian Paredes‐Gamero, Thiago Carlos Bertolin, Maria Tereza dos Santos Correia, Patrícia Maria Guedes Paiva, Alla Gustchina, Alexander Wlodawer, Maria Luíza Vilela Oliva
Software Mentions: 2
Published: over 11 years ago

10.1242/bio.039115

Quantitative analysis of the ThrbCRM1-centered gene regulatory network
Cited by: 4
Author(s): Benjamin Souferi, Mark M. Emerson
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pgen.1009817

A unique cell wall synthetic response evoked by glucosamine determines pathogenicity-associated fungal cellular differentiation
Cited by: 11
Author(s): Pengjie Hu, Hao Ding, Ling Shen, Guang‐Jun He, Huimin Liu, Xiuyun Tian, Changyu Tao, Xiangzheng Bai, Jingnan Liang, Cheng Jin, Xinping Xu, Ence Yang, Linqi Wang
Software Mentions: 2
Published: about 3 years ago

10.1371/journal.pgen.1009700

Oligopaint DNA FISH reveals telomere-based meiotic pairing dynamics in the silkworm, Bombyx mori
Cited by: 8
Author(s): Leah F. Rosin, José Pedro Gil, Ines A. Drinnenberg, Elissa P. Lei
Software Mentions: 2
Published: over 3 years ago

10.1016/j.molcel.2021.03.020

Non-canonical autophagy drives alternative ATG8 conjugation to phosphatidylserine
Cited by: 84
Author(s): Joanne Durgan, Alf Håkon Lystad, Katherine E. Sloan, Sven R. Carlsson, Michael Wilson, Elena Marcassa, Rachel Ulferts, Judith Webster, Andrea F. Lopez-Clavijo, Michael J.O. Wakelam, Rupert Beale, Anne Simonsen, David Oxley, Oliver Florey
Software Mentions: 2
Published: over 3 years ago

10.1186/s12964-020-00630-w

Inhibition of αvβ3 integrin impairs adhesion and uptake of tumor-derived small extracellular vesicles
Cited by: 36
Author(s): Wanessa Fernanda Altei, Bianca Cruz Pachane, Patty Karina dos Santos, Lígia Nunes de Morais Ribeiro, Bong Hwan Sung, Alissa M. Weaver, Heloísa Sobreiro Selistre-de-Araújo
Software Mentions: 2
Published: about 4 years ago

10.1038/s41419-020-2556-3

Galectin-3 modulates epithelial cell adaptation to stress at the ER-mitochondria interface
Cited by: 19
Author(s): Lucie Coppin, Arnaud Jannin, Emilie Ait Yahya, C. Thuillier, Céline Villenet, Meryem Tardivel, Antonino Bongiovanni, Cécile Gaston, Simon de Beco, Nicolas Barois, Isabelle Van Seuningen, Emmanuelle Durand, Amélie Bonnefond, Jean-Claude Vienne, Jòseph Vamecq, Martin Figeac, Audrey Vincent, Delphine Delacour, Nicole Porchet, Pascal Pigny
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pgen.1007935

The nuclear hormone receptor NHR-86 controls anti-pathogen responses in C. elegans
Cited by: 38
Author(s): Nicholas Peterson, Hilary K. Cheesman, Liu P, Sarah M. Anderson, Kyle J. Foster, Richa Chhaya, Paola N. Perrat, Jose Thekkiniath, Qiyuan Yang, Cole M. Haynes, Read Pukkila-Worley
Software Mentions: 2
Published: almost 6 years ago

10.1128/MCB.00398-17

Creation of Stable Heterothallic Strains of <i>Komagataella phaffii</i> Enables Dissection of Mating Gene Regulation
Cited by: 19
Author(s): Lina Heistinger, Brigitte Gasser, Diethard Mattanovich
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pntd.0007675

Polarized lung inflammation and Tie2/angiopoietin-mediated endothelial dysfunction during severe Orientia tsutsugamushi infection
Cited by: 16
Author(s): Brandon Trent, Yuejin Liang, Yan Xing, Marisol Esqueda, Wenyan Yang, Nam Hyuk Cho, Hong Il Kim, So Hyun Kim, Thomas R. Shelite, Jiyang Cai, Jiaren Sun, Donald H. Bouyer, Jinjun Liu, Lynn Soong
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pgen.1009647

Tau, XMAP215/Msps and Eb1 co-operate interdependently to regulate microtubule polymerisation and bundle formation in axons
Cited by: 16
Author(s): Ines Hahn, André Voelzmann, Jill Parkin, Judith B. Fülle, Paula G. Slater, Laura Anne Lowery, Natalia Sánchez‐Soriano, Andreas Prokop
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pgen.1007567

Ras-ERK-ETS inhibition alleviates neuronal mitochondrial dysfunction by reprogramming mitochondrial retrograde signaling
Cited by: 14
Author(s): Olivia F. Duncan, Lucy Granat, Ramya Ranganathan, Vandana Singh, David Mazaud, Manolis Fanto, David Chambers, Clive Ballard, J.E. Bateman
Software Mentions: 2
Published: over 6 years ago

10.1161/ATVBAHA.119.313430

Novel Plaque Enriched Long Noncoding RNA in Atherosclerotic Macrophage Regulation (PELATON)
Cited by: 40
Author(s): John Hung, Jessica P. Scanlon, Amira D. Mahmoud, Julie Rodor, Margaret D. Ballantyne, M Fontaine, Lieve Temmerman, Jakub Kaczynski, Katie Connor, Raghu Bhushan, Erik A. L. Biessen, David E. Newby, Judith C. Sluimer, Andrew H. Baker
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pgen.1009184

Cyclin B3 activates the Anaphase-Promoting Complex/Cyclosome in meiosis and mitosis
Cited by: 10
Author(s): Damien Garrido, Mohammed Bourouh, Éric Bonneil, Pierre Thibault, Andrew Swan, Vincent Archambault
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pntd.0007352

The most abundant cyst wall proteins of Acanthamoeba castellanii are lectins that bind cellulose and localize to distinct structures in developing and mature cyst walls
Cited by: 17
Author(s): Pamela Magistrado-Coxen, Yousuf Aqeel, Angelo Lopez, John R. Haserick, Breeanna R. Urbanowicz, Catherine E. Costello, John Samuelson
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pgen.1004066

ComEA Is Essential for the Transfer of External DNA into the Periplasm in Naturally Transformable Vibrio cholerae Cells
Cited by: 96
Author(s): Patrick Seitz, Hassan Pezeshgi Modarres, Sandrine Borgeaud, Roman D. Bulushev, Lorenz J. Steinbock, Aleksandra Radenović, Matteo Dal Peraro, Melanie Blokesch
Software Mentions: 2
Published: almost 11 years ago

10.1038/s41422-018-0080-0

STAT3 associates with vacuolar H+-ATPase and regulates cytosolic and lysosomal pH
Cited by: 74
Author(s): Bin Liu, Johan Palmfeldt, Lin Lin, Alexandria Colaço, Kim Katrine Bjerring Clemmensen, Jinrong Huang, Fengping Xu, Xin Liu, Kenji Maeda, Yonglun Luo, Marja Jäättelä
Software Mentions: 2
Published: over 6 years ago

10.3390/metabo11090571

Unravelling the Puzzle of Anthranoid Metabolism in Living Plant Cells Using Spectral Imaging Coupled to Mass Spectrometry
Cited by: 1
Author(s): Quentin Chevalier, Jean-Baptiste Gallé, Nicolas Wasser, Valérie Mazan, Claire Villette, Jérôme Mutterer, Maria Mercedes Elustondo, Nicolas Girard, Mourad Elhabiri, Hubert Schaller, Andréa Hemmerlin, Catherine Vonthron-Sénécheau
Software Mentions: 2
Published: about 3 years ago

10.3390/cells8101146

Tubulin-Dependent Transport of Connexin-36 Potentiates the Size and Strength of Electrical Synapses
Cited by: 12
Author(s): Cherie Alicia Brown, Cristiane del Corsso, Christiane Zoidl, Logan W. Donaldson, David C. Spray, Georg Zoidl
Software Mentions: 2
Published: about 5 years ago

10.3390/molecules25071655

A Tryptophan Metabolite, 8-Hydroxyquinaldic Acid, Exerts Antiproliferative and Anti-Migratory Effects on Colorectal Cancer Cells
Cited by: 17
Author(s): Katarzyna Walczak, Ewa Langner, Karolina Szalast, Anna Makuch-Kocka, Piotr Pożarowski, Tomasz Plech
Software Mentions: 2
Published: over 4 years ago

10.1111/acel.12835

Targeting the phospholipase A2 receptor ameliorates premature aging phenotypes
Cited by: 28
Author(s): Audrey Griveau, Clotilde Wiel, Benjamin Le Calvé, Dorian V. Ziegler, Sophia Djebali, Marine Warnier, Nadine Martin, Jacqueline Marvel, David Vindrieux, Martin O. Bergö, David Bernard
Software Mentions: 2
Published: about 6 years ago

10.1186/1741-7007-12-24

Initiating a regenerative response; cellular and molecular features of wound healing in the cnidarian Nematostella vectensis
Cited by: 101
Author(s): Timothy Q. DuBuc, Nikki Traylor-Knowles, Mark Q. Martindale
Software Mentions: 2
Published: over 10 years ago

10.3390/cells9020355

Impaired Nuclear Export of the Ribonucleoprotein Complex and Virus-Induced Cytotoxicity Combine to Restrict Propagation of the A/Duck/Malaysia/02/2001 (H9N2) Virus in Human Airway Cells
Cited by: 2
Author(s): Sriram Kumar, David Yeo, Nisha Muralidharan, Soak Kuan Lai, Cathlyn Tong, Boon Huan Tan, Richard J. Sugrue
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pgen.1007795

A single class of ARF GTPase activated by several pathway-specific ARF-GEFs regulates essential membrane traffic in Arabidopsis
Cited by: 25
Author(s): Manoj K. Singh, Sandra Richter, Hauke Beckmann, Marika Kientz, York‐Dieter Stierhof, Nadine Anders, Florian Fäßler, Michael L. Nielsen, Christian Knöll, Alexis Thomann, Mirita Franz‐Wachtel, Boris Maček, Karen Skriver, Peter Pimpl, Gerd Jürgens
Software Mentions: 2
Published: about 6 years ago

10.1007/s00412-018-0671-z

Three-dimensional analysis of nuclear heterochromatin distribution during early development in the rabbit
Cited by: 6
Author(s): Amélie Bonnet-Garnier, Kiên Kiêu, Tiphaine Aguirre-Lavin, Krisztina Tar, Pierre Flores, Zichuan Liu, Nathalie Peynot, Martine Chebrout, András Dinnyés, Véronique Duranthon, Nathalie Beaujean
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pcbi.1002671

Sub-diffraction Limit Localization of Proteins in Volumetric Space Using Bayesian Restoration of Fluorescence Images from Ultrathin Specimens
Cited by: 22
Author(s): Gordon Wang, Stephen J. Smith
Software Mentions: 2
Published: about 12 years ago

10.1371/journal.pgen.1007851

Meiosis-specific prophase-like pathway controls cleavage-independent release of cohesin by Wapl phosphorylation
Cited by: 31
Author(s): Kiran Challa, Ghanim Fajish, Miki Shinohara, Franz Klein, Susan M. Gasser, Atsushi Shinohara
Software Mentions: 2
Published: almost 6 years ago

10.1186/s13007-019-0406-z

Multicolour three dimensional structured illumination microscopy of immunolabeled plant microtubules and associated proteins
Cited by: 18
Author(s): Tereza Vavrdová, Olga Šamajová, Pavel Křenek, Miroslav Ovečka, Pavlína Floková, R. Šnaurová, Jozef Šamaj, George Komis
Software Mentions: 2
Published: over 5 years ago

10.1007/s00401-017-1783-x

Changes in chromatin state reveal ARNT2 at a node of a tumorigenic transcription factor signature driving glioblastoma cell aggressiveness
Cited by: 19
Author(s): Alexandra Bogeas, Ghislaine Morvan-Dubois, Elias A. El-Habr, François Lejeune, Matthieu Defrance, Ashwin Narayanan, Klaudia Kuranda, Fanny Burel‐Vandenbos, Salwa Sayd, Virgile Delaunay, Luiz Gustavo Dubois, Hugues Parrinello, Stéphanie Rialle, Sylvie Fabrega, Ahmed Idbaïh, Jacques Haiech, Ivan Bièche, Thierry Virolle, Michèle Goodhardt, Hervé Chneiweiss, Marie Pierre Junier
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pbio.3001148

Molecular basis of F-actin regulation and sarcomere assembly via myotilin
Cited by: 9
Author(s): Július Košťan, Miha Pavšič, Vid Puž, Thomas C. Schwarz, Friedel Drepper, Sibylle Molt, Melissa A. Graewert, Claudia Schreiner, Sara Sajko, Peter F.M. van der Ven, Adekunle Onipe, Dmitri I. Svergun, Bettina Warscheid, Robert Konrat, Dieter O. Fürst, Brigita Lenarčič, Kristina Djinović-Carugo
Software Mentions: 2
Published: over 3 years ago

10.1016/j.devcel.2019.10.012

A Tug-of-War between Cell Shape and Polarity Controls Division Orientation to Ensure Robust Patterning in the Mouse Blastocyst
Cited by: 51
Author(s): Ritsuya Niwayama, Prachiti Moghe, Yanjun Liu, Dimitri Fabrèges, Frank Buchholz, Matthieu Piel, Takashi Hiiragi
Software Mentions: 2
Published: almost 5 years ago

10.3389/fcimb.2017.00475

Predictable, Tunable Protein Production in Salmonella for Studying Host-Pathogen Interactions
Cited by: 14
Author(s): Kendal G. Cooper, Audrey Chong, Tregei Starr, Ciaran E. Finn, Olivia Steele‐Mortimer
Software Mentions: 2
Published: about 7 years ago

10.3389/fcimb.2018.00145

The Loss of Expression of a Single Type 3 Effector (CT622) Strongly Reduces Chlamydia trachomatis Infectivity and Growth
Cited by: 14
Author(s): Mathilde M. Cossé, Michael L. Barta, Derek J. Fisher, Lena K. Oesterlin, Béatrice Niragire, Stéphanie Perrinet, Gaël A. Millot, P. Scott Hefty, Agathe Subtil
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pgen.1005998

Arabidopsis AtMORC4 and AtMORC7 Form Nuclear Bodies and Repress a Large Number of Protein-Coding Genes
Cited by: 37
Author(s): C. Jake Harris, Dylan Husmann, Wanlu Liu, Farid El Kasmi, Haifeng Wang, Ashot Papikian, William A. Pastor, Guillaume Moissiard, Ajay A. Vashisht, Jeffery L. Dangl, James A. Wohlschlegel, Steven E. Jacobsen
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0250262

Neonatal valproic acid exposure produces altered gyrification related to increased parvalbumin-immunopositive neuron density with thickened sulcal floors
Cited by: 6
Author(s): Kazuhiko Sawada, Shiori Kamiya, Ichio Aoki
Software Mentions: 2
Published: over 3 years ago

10.7150/thno.46078

Regulation of Hippo/YAP signaling and Esophageal Squamous Carcinoma progression by an E3 ubiquitin ligase PARK2
Cited by: 46
Author(s): Xiaofeng Zhou, Yajie Li, Weilong Wang, Sujie Wang, Jinghan Hou, Aijia Zhang, Benjie Lv, Can Gao, Zhe Yan, Dan Pang, Kui Lu, Nor Hazwani Ahmad, Lidong Wang, Jian Zhu, Lichen Zhang, Ting Zhuang, Xiumin Li
Software Mentions: 2
Published: almost 5 years ago

10.3389/fcell.2020.00700

Tubular ER Associates With Diacylglycerol-Rich Structures During Lipid Droplet Consumption
Cited by: 4
Author(s): Suriakarthiga Ganesan, Marjan Tavassoli, Brittney Shabits, Vanina Zaremberg
Software Mentions: 2
Published: over 4 years ago

10.1038/srep10564

A sensitised RNAi screen reveals a ch-TOG genetic interaction network required for spindle assembly
Cited by: 10
Author(s): Alexis R. Barr, Chris Bakal
Software Mentions: 2
Published: over 9 years ago

10.1038/s41598-021-82178-4

Submicron spatial resolution optical coherence tomography for visualising the 3D structures of cells cultivated in complex culture systems
Cited by: 8
Author(s): Chia‐Ying Tsai, Chia-Lung Shih, Hsiao-Sang Chu, Yi‐Ting Hsieh, Sheng‐Lung Huang, Wei-Li Chen
Software Mentions: 2
Published: almost 4 years ago

10.1038/s41598-017-09182-5

Inflammatory cytokine-induced changes in neural network activity measured by waveform analysis of high-content calcium imaging in murine cortical neurons
Cited by: 29
Author(s): Benjamin D. Clarkson, Robert J. Kahoud, Christina B. McCarthy, Charles L. Howe
Software Mentions: 2
Published: over 7 years ago

10.7554/eLife.48847

A single H/ACA small nucleolar RNA mediates tumor suppression downstream of oncogenic RAS
Cited by: 78
Author(s): Mary McMahon, Adrian Contreras, Mikael Holm, Tamayo Uechi, Craig M. Forester, Xiaming Pang, Cody B. Jackson, Meredith Calvert, Bin Chen, David A. Quigley, John M. Luk, R. K. Kelley, John D. Gordan, Ryan M. Gill, Scott C. Blanchard, Davide Ruggero
Software Mentions: 2
Published: about 5 years ago

10.3389/fcell.2021.660349

Coactosin Promotes F-Actin Protrusion in Growth Cones Under Cofilin-Related Signaling Pathway
Cited by: 3
Author(s): Xubin Hou, Motohiro Nozumi, Harukazu Nakamura, Michihiro Igarashi, Sayaka Sugiyama
Software Mentions: 2
Published: over 3 years ago

10.7554/eLife.35907

A Rho signaling network links microtubules to PKD controlled carrier transport to focal adhesions
Cited by: 29
Author(s): Stephan A. Eisler, Filipa Curado, Gisela Link, Sarah Schulz, Melanie Noack, Maren Steinke, Monilola A. Olayioye, Angelika Haußer
Software Mentions: 2
Published: over 6 years ago

10.3389/fncir.2017.00009

Mapping and Analysis of the Connectome of Sympathetic Premotor Neurons in the Rostral Ventrolateral Medulla of the Rat Using a Volumetric Brain Atlas
Cited by: 34
Author(s): Bowen Dempsey, Le Shen, Anita J. Turner, Phillip Bokiniec, Radhika Ramadas, Jan G. Bjaalie, Clément Menuet, Rachael L. Neve, Andrew M. Allen, Ann K. Goodchild, Simon McMullan
Software Mentions: 2
Published: over 7 years ago

10.7554/eLife.65762

A sustained type I IFN-neutrophil-IL-18 axis drives pathology during mucosal viral infection
Cited by: 13
Author(s): Tania Lebratti, Ying Shiang Lim, Adjoa Cofie, Prabhakar S. Andhey, Xiaoping Jiang, Jason Scott, Maria Rita Fabbrizi, Ayşe Naz Ozantürk, Christine Pham, Regina A. Clemens, Maxim N. Artyomov, Mary C. Dinauer, Haina Shin
Software Mentions: 2
Published: over 3 years ago

10.7554/eLife.48615

Local axonal morphology guides the topography of interneuron myelination in mouse and human neocortex
Cited by: 44
Author(s): Jeffrey Stedehouder, Demi Brizee, Johan A. Slotman, Maria Pascual-Garcia, Megan L. Leyrer, Bibi L. J. Bouwen, Clemens Dirven, Zhenyu Gao, David M. Berson, Adriaan B. Houtsmuller, Steven A. Kushner
Software Mentions: 2
Published: about 5 years ago

10.15252/emmm.201404077

Efficient transduction and optogenetic stimulation of retinal bipolar cells by a synthetic adeno‐associated virus capsid and promoter
Cited by: 142
Author(s): Thérèse Cronin, Luk Vandenberghe, Péter Hantz, Josephine Jüttner, Andreas Reimann, Ágota–Enikő Kacsó, Rachel M. Huckfeldt, Volker Busskamp, Hubertus Kohler, Pamela S. Lagali, Botond Roska, Jean Bennett
Software Mentions: 2
Published: over 10 years ago

10.3389/fnagi.2020.602688

Age-Dependent Activation and Neuronal Differentiation of Lgr5+ Basal Cells in Injured Olfactory Epithelium via Notch Signaling Pathway
Cited by: 4
Author(s): Xuewen Li, Meimei Tong, Li Wang, Yumei Qin, Hongmeng Yu, Yiqun Yu
Software Mentions: 2
Published: almost 4 years ago

10.3389/fncir.2018.00035

Parvalbumin and GABA Microcircuits in the Mouse Superior Colliculus
Cited by: 49
Author(s): Claudio Villalobos, Qiong Wu, Psyche H Lee, Paul J. May, Michele A. Basso
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-021-86133-1

Controlling T cells spreading, mechanics and activation by micropatterning
Cited by: 7
Author(s): Anaïs Sadoun, Martine Biarnes-Pelicot, Laura Ghesquiere-Dierickx, Ambroise Wu, Olivier Théodoly, Laurent Limozin, Yannick Hamon, Pierre-Henri Puech
Software Mentions: 2
Published: over 3 years ago

10.15252/emmm.201911248

A high‐affinity, bivalent <scp>PDZ</scp> domain inhibitor complexes <scp>PICK</scp> 1 to alleviate neuropathic pain
Cited by: 16
Author(s): Nikolaj Riis Christensen, Marta De Luca, Michael Brett Lever, Mette Richner, Astrid B Hansen, Gith Noes-Holt, Kathrine L. Jensen, Mette Rathje, Dennis Bo Jensen, Simon Erlendsson, Christian R. O. Bartling, Ina Ammendrup-Johnsen, Sofie Pedersen, Michèle Schönauer, Klaus B. Nissen, Søren Roi Midtgaard, Kaare Teilum, Andreas T. Sørensen, Anders Bach, Kristian Strømgaard, Claire Francesca Meehan, Christian Bjerggaard Vægter, Ulrik Gether, Kenneth L. Madsen
Software Mentions: 2
Published: over 4 years ago

10.15252/emmm.201910491

Macrophages induce malignant traits in mammary epithelium via IKKε/TBK1 kinases and the serine biosynthesis pathway
Cited by: 9
Author(s): Ewa Wilcz-Villega, Edward Carter, Alastair Ironside, Ruoyan Xu, Isabella Mataloni, Julie Holdsworth, William Edward Jones, Rocío Moreno Béjar, Lukas Uhlik, Robert Bentham, Susana A. Godinho, Jesmond Dalli, Richard Grose, György Szabadkai, Louise Jones, Kairbaan Hodivala‐Dilke, Katiuscia Bianchi
Software Mentions: 2
Published: almost 5 years ago

10.3389/fnbeh.2014.00053

Interactions with the young down-regulate adult olfactory neurogenesis and enhance the maturation of olfactory neuroblasts in sheep mothers
Cited by: 23
Author(s): Maïna Brus, Maryse Meurisse, Matthieu Keller, Frédéric Lévy
Software Mentions: 2
Published: almost 11 years ago

10.12688/f1000research.11577.2

Using spectral decomposition of the signals from laurdan-derived probes to evaluate the physical state of membranes in live cells
Cited by: 9
Author(s): Serge Mazères, Farzad Fereidouni, Etienne Joly
Software Mentions: 2
Published: over 7 years ago

10.3389/fbioe.2021.650289

Nanofiber-Based Delivery of Bioactive Lipids Promotes Pro-regenerative Inflammation and Enhances Muscle Fiber Growth After Volumetric Muscle Loss
Cited by: 6
Author(s): Cheryl L. San Emeterio, Lauren A. Hymel, Thomas C. Turner, Molly E. Ogle, Emily G. Pendleton, William Y. York, Claire Olingy, Alan Y. Liu, Hong Seo Lim, Todd Sulchek, Gordon L. Warren, Luke J. Mortensen, Peng Qiu, Young C. Jang, Nick J. Willett, Edward A. Botchwey
Software Mentions: 2
Published: over 3 years ago

10.1038/srep37643

Nucleoside-Diphosphate-Kinase of P. gingivalis is Secreted from Epithelial Cells In the Absence of a Leader Sequence Through a Pannexin-1 Interactome
Cited by: 25
Author(s): Kalina R. Atanasova, Jungnam Lee, JoAnn S. Roberts, Kyulim Lee, David M. Ojcius, Özlem Yılmaz
Software Mentions: 2
Published: almost 8 years ago

10.3389/fmicb.2020.01501

Influence of Catecholamines (Epinephrine/Norepinephrine) on Biofilm Formation and Adhesion in Pathogenic and Probiotic Strains of Enterococcus faecalis
Cited by: 26
Author(s): Mélyssa Cambronel, Flore Nilly, Ouiza Mesguida, Amine M. Boukerb, Pierre‐Jean Racine, Olfa Baccouri, Valérie Borrel, J Forga Martel, Florian Fécamp, Rikki Knowlton, Kurt Zimmermann, Eugen Domann, Sophie Rodrigues, Marc Feuilloley, Nathalie Connil
Software Mentions: 2
Published: over 4 years ago

10.12688/f1000research.16802.1

An in vitro model for studying CNS white matter: functional properties and experimental approaches
Cited by: 12
Author(s): Silvia Bijland, Gemma Thomson, Matthew Euston, Kyriakos Michail, Katja Thümmler, Steve Mücklisch, Colin L. Crawford, Susan C. Barnett, Marκ McLaughlin, Thomas Anderson, Christopher Linington, Euan R. Brown, Eric R. Kalkman, Julia M. Edgar
Software Mentions: 2
Published: almost 6 years ago

10.7554/eLife.54304

Progenitors oppositely polarize WNT activators and inhibitors to orchestrate tissue development
Cited by: 16
Author(s): Irina Matos, Amma Asare, John Levorse, Tamara Ouspenskaia, June de la Cruz-Racelis, Laura-Nadine Schuhmacher, Elaine Fuchs
Software Mentions: 2
Published: over 4 years ago

10.15252/emmm.202012651

Therapeutic development of group B <i>Streptococcus</i> meningitis by targeting a host cell signaling network involving EGFR
Cited by: 7
Author(s): Ning Zhu, Chengxian Zhang, Atish Prakash, Hangping Zheng, Wei Liu, Weifeng She, Andrew J. Morris, Kwang Sik Kim
Software Mentions: 2
Published: almost 4 years ago

Projects: pypi: Zen

Papers Mentioning Zen 2,767