pypi: Zen | Projects | Ecosyste.ms: Papers

10.1016/j.cell.2021.01.034

Antidepressant drugs act by directly binding to TRKB neurotrophin receptors
Cited by: 275
Author(s): Plínio Casarotto, Mykhailo Girych, Senem Merve Fred, Vera Kovaleva, Rafael Moliner, Giray Enkavi, Caroline Biojone, Cecilia Cannarozzo, Madhusmita Priyadarshini Sahu, Katja Kaurinkoski, Cecilia A. Brunello, Anna Steinzeig, Frederike Winkel, Sudarshan Patil, Stefan Vestring, Tsvetan Serchov, Cassiano Ricardo Alves Faria Diniz, Liina Laukkanen, Iseline Cardon, Hanna Antila, Tomasz Róg, Petteri Piepponen, Clive R. Bramham, Claus Normann, Sari E. Lauri, Märt Saarma, Ilpo Vattulainen, Eero Ċastrén
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0180871

Can single molecule localization microscopy be used to map closely spaced RGD nanodomains?
Cited by: 9
Author(s): Mahdie Mollazade, Thibault Tabarin, Philip R. Nicovich, Alexander H. Soeriyadi, Daniel J. Nieves, J. Justin Gooding, Katharina Gaus
Software Mentions: 2
Published: over 8 years ago

10.1186/s40478-019-0871-7

Synapse alterations precede neuronal damage and storage pathology in a human cerebral organoid model of CLN3-juvenile neuronal ceroid lipofuscinosis
Cited by: 38
Author(s): Gemma Gomez-Giro, Jonathan Arias, Javier Jarazo, Dagmar Zeuschner, Muhammad Ali, Nina Possemis, Silvia Bolognin, Rashi Halder, Christian Jäger, Willemijn F. E. Kuper, Peter M. van Hasselt, Holm Zaehres, Antonio del Sol, Herman van der Putten, Hans R. Schöler, Jens Christian Schwamborn
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0082083

Dendritic Branch Intersections Are Structurally Regulated Targets for Efficient Axonal Wiring and Synaptic Clustering
Cited by: 3
Author(s): Monika Pinchas, Danny Baranes
Software Mentions: 2
Published: almost 12 years ago

10.1016/j.cell.2020.05.018

An Autonomous Oscillation Times and Executes Centriole Biogenesis
Cited by: 27
Author(s): Mustafa G. Aydogan, Thomas L. Steinacker, Mohammad Mofatteh, Zachary M. Wilmott, Felix Zhou, Lisa Gartenmann, Alan Wainman, Saroj Saurya, Zsofia A. Novak, Siu‐Shing Wong, Alain Goriely, Michael A. Boemo, Jordan W. Raff
Software Mentions: 2
Published: over 5 years ago

10.1007/s00018-020-03467-1

The Rab5 activator RME-6 is required for amyloid precursor protein endocytosis depending on the YTSI motif
Cited by: 7
Author(s): Simone Eggert, Tomas Gruebl, Ritu Rajender, Carsten Rupp, Bianca Sander, Amelie Heesch, Marius Zimmermann, Sebastian Hoepfner, Hanswalter Zentgraf, Stefan Kins
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0249068

Lymphatic endothelial-cell expressed ACKR3 is dispensable for postnatal lymphangiogenesis and lymphatic drainage function in mice
Cited by: 6
Author(s): Elena C. Sigmund, Lilian Baur, Philipp Schineis, Jorge Arasa, Víctor Collado-Díaz, Martina Vranova, Rolf A.K. Stahl, Marcus Thelen, Cornelia Halin
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0235691

A pilot study investigating the effects of voluntary exercise on capillary stalling and cerebral blood flow in the APP/PS1 mouse model of Alzheimer’s disease
Cited by: 15
Author(s): Kaja Falkenhain, Nancy E. Ruiz-Uribe, Mohammad Haft‐Javaherian, Muhammad Ali, Stall Catchers, Pietro Michelucci, Chris B. Schaffer, Oliver Bracko
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0235360

Sodium–calcium exchanger 1 is the key molecule for urinary potassium excretion against acute hyperkalemia
Cited by: 6
Author(s): Wakana Shoda, Naohiro Nomura, Fumiaki Ando, Hideaki Tagashira, Takahiro Iwamoto, Akihito Ohta, Kiyoshi Isobe, Takayasu Mori, Koichiro Susa, Eisei Sohara, Tatemitsu Rai, Shinichi Uchida
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0136396

Identification of a Cryptic Bacterial Promoter in Mouse (mdr1a) P-Glycoprotein cDNA
Cited by: 5
Author(s): Kristen M. Pluchino, Dominic Esposito, Janna K. Moen, Matthew D. Hall, James P. Madigan, Suneet Shukla, Lauren V. Procter, Vanessa Wall, Thomas D. Schneider, Ian A. Pringle, Suresh V. Ambudkar, Deborah R. Gill, Stephen C. Hyde, Michael M. Gottesman
Software Mentions: 2
Published: about 10 years ago

10.1371/journal.pone.0150320

Streptococcus pneumoniae Cell-Wall-Localized Phosphoenolpyruvate Protein Phosphotransferase Can Function as an Adhesin: Identification of Its Host Target Molecules and Evaluation of Its Potential as a Vaccine
Cited by: 14
Author(s): Yaffa Mizrachi Nebenzahl, Karin Blau, Tatyana Kushnir, Marilou Shagan, Maxim Portnoi, Avraham Cohen, Shalhevet Azriel, Itai Malka, Asad Adawi, Daniel Kafka, Shahar Dotan, Gali Guterman, Shany Troib, Tali Fishilevich, Jonathan M. Gershoni, Alex Braiman, Andrea M. Mitchell, Timothy J. Mitchell, Nurith Porat, Inna Goliand, Vered Chalifa‐Caspi, Edwin Swiatlo, Michael Tal, R. John Ellis, Natalie Elia, Ron Dagan
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0251474

Analysis of blood parameters and molecular endometrial markers during early reperfusion in two ovine models of uterus transplantation
Cited by: 3
Author(s): Marie Carbonnel, Nathalie Cornet, Aurélie Revaux, Angéline Favre-Inhofer, Laurent Galio, Mariam Raliou, Anne Couturier-Tarrade, Corinne Giraud-Delville, Gilles Charpigny, Valérie Gelin, Olivier Dubois, Barbara Hersant, Romain Bosc, Raphaël Coscas, François Vialard, Pascale Chavatte‐Palmer, Christophe Richard, Olivier Sandra, Jean Marc Ayoubi
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0200789

Eyes shut homolog is important for the maintenance of photoreceptor morphology and visual function in zebrafish
Cited by: 35
Author(s): Muriël Messchaert, Margo Dona, Sanne Broekman, Theo Peters, Julio C. Corral-Serrano, Ralph Slijkerman, Erwin van Wijk, Rob W.J. Collin
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0182407

Protective effects on the retina after ranibizumab treatment in an ischemia model
Cited by: 23
Author(s): Stephanie C. Joachim, Marina Renner, Jacqueline Reinhard, Carsten Theiß, Caroline May, Stephanie Lohmann, Sabrina Reinehr, Gesa Stute, Andréas Faissner, Katrin Marcus, H. Burkhard Dick
Software Mentions: 2
Published: about 8 years ago

10.1371/journal.pone.0220019

The use of mixed collagen-Matrigel matrices of increasing complexity recapitulates the biphasic role of cell adhesion in cancer cell migration: ECM sensing, remodeling and forces at the leading edge of cancer invasion
Cited by: 56
Author(s): María Anguiano, Xabier Morales, Carlos Castilla, Andrés de la Peña, Cristina Ederra, Martín Martínez, Mikel Ariz, Maider Esparza, H. Amaveda, M. Mora, Nieves Movilla, José Manuel García Aznar, Iván Cortés‐Domínguez, Carlos Ortiz‐de‐Solórzano
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0073962

The Human Minor Histocompatibility Antigen1 Is a RhoGAP
Cited by: 28
Author(s): Bart Jan de Kreuk, Antje Schaefer, Eloise C. Anthony, Simon Tol, Mar Fernandez‐Borja, Dirk Geerts, J. Pool, Lothar Hambach, Els Goulmy, Peter L. Hordijk
Software Mentions: 2
Published: about 12 years ago

10.3390/mi9120660

Separation and Characterization of Prostate Cancer Cell Subtype according to Their Motility Using a Multi-Layer CiGiP Culture
Cited by: 9
Author(s): Linxiang Wang, Ying Zhou, Jingjing Fu, Zhisong Lu
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0226049

Loss of family with sequence similarity 13, member A exacerbates pulmonary hypertension through accelerating endothelial-to-mesenchymal transition
Cited by: 10
Author(s): Pranindya Rinastiti, Koji Ikeda, Elda Putri Rahardini, Kazuya Miyagawa, Naoki Tamada, Yuko Kuribayashi, Ken‐ichi Hirata, Noriaki Emoto
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0042563

Rho GTPase Expression in Human Myeloid Cells
Cited by: 20
Author(s): Suzanne F. G. van Helden, Eloise C. Anthony, Rob Dee, Peter L. Hordijk
Software Mentions: 2
Published: about 13 years ago

10.1371/journal.pone.0053918

Profilin 1 as a Target for Cathepsin X Activity in Tumor Cells
Cited by: 30
Author(s): Urša Pečar Fonović, Zala Jevnikar, Matija Rojnik, Bojan Doljak, Marko Fonović, Polona Jamnik, Janko Kos
Software Mentions: 2
Published: almost 13 years ago

10.1371/journal.pone.0148379

BioSig3D: High Content Screening of Three-Dimensional Cell Culture Models
Cited by: 18
Author(s): Cemal Cagatay Bilgin, Gerald Fontenay, Qingsu Cheng, Hang Chang, Ju Han, Bahram Parvin
Software Mentions: 2
Published: over 9 years ago

10.3390/microorganisms7090352

The Architecture of Monospecific Microalgae Biofilms
Cited by: 23
Author(s): Andrea Fanesi, Armelle Paule, Olivier Bernard, Romain Briandet, Filipa Lopes
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0144572

Supervised Machine Learning for Classification of the Electrophysiological Effects of Chronotropic Drugs on Human Induced Pluripotent Stem Cell-Derived Cardiomyocytes
Cited by: 25
Author(s): Christopher M. Heylman, Rupsa Datta, Agua Sobrino, Steven C. George, Enrico Gratton
Software Mentions: 2
Published: almost 10 years ago

10.1371/journal.pone.0239176

Apoptosis in idiopathic inflammatory myopathies with partial invasion; a role for CD8+ cytotoxic T cells?
Cited by: 8
Author(s): Olof Danielsson, Bo Häggqvist, Liv Gröntoft, Karin Öllinger, Jan Ernerudh
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0138381

The Role of ARF6 in Biliary Atresia
Cited by: 51
Author(s): Mylarappa Ningappa, Juhoon So, Joseph T. Glessner, Chethan Ashokkumar, Sarangarajan Ranganathan, Jin‐Young Min, Brandon W. Higgs, Qing Sun, Kimberly Haberman, Lori Schmitt, Sílvia Vilarinho, Pramod K. Mistry, Gerard Vockley, Anil Dhawan, George K. Gittes, Hákon Hákonarson, Ronald Jaffe, Shankar Subramaniam, Donghun Shin, Rakesh Sindhi
Software Mentions: 2
Published: about 10 years ago

10.1371/journal.pone.0064426

Crystal Structure of Crataeva tapia Bark Protein (CrataBL) and Its Effect in Human Prostate Cancer Cell Lines
Cited by: 19
Author(s): Rodrigo S. Ferreira, Dongwen Zhou, Joana Gasperazzo Ferreira, Mariana Cristina Cabral Silva, Rosemeire A. Silva-Lucca, Reinhard Mentele, Edgar Julian Paredes‐Gamero, Thiago Carlos Bertolin, Maria Tereza dos Santos Correia, Patrícia Maria Guedes Paiva, Alla Gustchina, Alexander Wlodawer, Maria Luíza Vilela Oliva
Software Mentions: 2
Published: over 12 years ago

10.1371/journal.pgen.1009817

A unique cell wall synthetic response evoked by glucosamine determines pathogenicity-associated fungal cellular differentiation
Cited by: 11
Author(s): Pengjie Hu, Hao Ding, Ling Shen, Guang‐Jun He, Huimin Liu, Xiuyun Tian, Changyu Tao, Xiangzheng Bai, Jingnan Liang, Cheng Jin, Xinping Xu, Ence Yang, Linqi Wang
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0246244

EZH2 inhibition decreases neuroblastoma proliferation and in vivo tumor growth
Cited by: 11
Author(s): Laura V. Bownes, Arthur Robin Williams, Raoud Marayati, Laura L. Stafman, Hooper R. Markert, Colin H. Quinn, Nikita Wadhwani, Jamie M. Aye, Jerry E. Stewart, Karina J. Yoon, Elizabeth Mroczek‐Musulman, Elizabeth A. Beierle
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0251273

Catalysis of the electrochemical oxygen reduction reaction (ORR) by animal and human cells
Cited by: 3
Author(s): Simon Guette-Marquet, Christine Roques, Alain Bergel
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0119864

Differential Dependence on N-Glycosylation of Anthrax Toxin Receptors CMG2 and TEM8
Cited by: 3
Author(s): Sarah Friebe, Julie Deuquet, F. Gisou van der Goot
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0136362

Proteins with Intrinsically Disordered Domains Are Preferentially Recruited to Polyglutamine Aggregates
Cited by: 30
Author(s): Maggie P. Wear, Dmitry Kryndushkin, Robert N. O’Meally, Jason L. Sonnenberg, Robert N. Cole, Frank Shewmaker
Software Mentions: 2
Published: about 10 years ago

10.1371/journal.pone.0215908

Wild-type and SAMP8 mice show age-dependent changes in distinct stem cell compartments of the interfollicular epidermis
Cited by: 8
Author(s): Gopakumar Changarathil, Karina Ramírez, Hiroko Isoda, Aiko Sada, Hiromi Yanagisawa
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pgen.1009700

Oligopaint DNA FISH reveals telomere-based meiotic pairing dynamics in the silkworm, Bombyx mori
Cited by: 8
Author(s): Leah F. Rosin, José Pedro Gil, Ines A. Drinnenberg, Elissa P. Lei
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pgen.1007935

The nuclear hormone receptor NHR-86 controls anti-pathogen responses in C. elegans
Cited by: 38
Author(s): Nicholas Peterson, Hilary K. Cheesman, Liu P, Sarah M. Anderson, Kyle J. Foster, Richa Chhaya, Paola N. Perrat, Jose Thekkiniath, Qiyuan Yang, Cole M. Haynes, Read Pukkila-Worley
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pntd.0007675

Polarized lung inflammation and Tie2/angiopoietin-mediated endothelial dysfunction during severe Orientia tsutsugamushi infection
Cited by: 16
Author(s): Brandon Trent, Yuejin Liang, Yan Xing, Marisol Esqueda, Wenyan Yang, Nam Hyuk Cho, Hong Il Kim, So Hyun Kim, Thomas R. Shelite, Jiyang Cai, Jiaren Sun, Donald H. Bouyer, Jinjun Liu, Lynn Soong
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0095248

The Kinematics of Cytotoxic Lymphocytes Influence Their Ability to Kill Target Cells
Cited by: 20
Author(s): Purnima Bhat, Graham R. Leggatt, Klaus I. Matthaei, Ian H. Frazer
Software Mentions: 2
Published: over 11 years ago

10.1371/journal.pgen.1009647

Tau, XMAP215/Msps and Eb1 co-operate interdependently to regulate microtubule polymerisation and bundle formation in axons
Cited by: 16
Author(s): Ines Hahn, André Voelzmann, Jill Parkin, Judith B. Fülle, Paula G. Slater, Laura Anne Lowery, Natalia Sánchez‐Soriano, Andreas Prokop
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pgen.1007567

Ras-ERK-ETS inhibition alleviates neuronal mitochondrial dysfunction by reprogramming mitochondrial retrograde signaling
Cited by: 14
Author(s): Olivia F. Duncan, Lucy Granat, Ramya Ranganathan, Vandana Singh, David Mazaud, Manolis Fanto, David Chambers, Clive Ballard, J.E. Bateman
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0257495

Guiding cell adhesion and motility by modulating cross-linking and topographic properties of microgel arrays
Cited by: 3
Author(s): Janine Riegert, Alexander Töpel, Jana Schieren, Renee Coryn, Stella Dibenedetto, Dominik L. Braunmiller, Kamil K Zajt, Carmen Schalla, Stephan Rütten, Martin Zenke, Andrij Pich, Antonio Sechi
Software Mentions: 2
Published: about 4 years ago

10.1161/ATVBAHA.119.313430

Novel Plaque Enriched Long Noncoding RNA in Atherosclerotic Macrophage Regulation (PELATON)
Cited by: 40
Author(s): John Hung, Jessica P. Scanlon, Amira D. Mahmoud, Julie Rodor, Margaret D. Ballantyne, M Fontaine, Lieve Temmerman, Jakub Kaczynski, Katie Connor, Raghu Bhushan, Erik A. L. Biessen, David E. Newby, Judith C. Sluimer, Andrew H. Baker
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pgen.1009184

Cyclin B3 activates the Anaphase-Promoting Complex/Cyclosome in meiosis and mitosis
Cited by: 10
Author(s): Damien Garrido, Mohammed Bourouh, Éric Bonneil, Pierre Thibault, Andrew Swan, Vincent Archambault
Software Mentions: 2
Published: about 5 years ago

10.1242/bio.039115

Quantitative analysis of the ThrbCRM1-centered gene regulatory network
Cited by: 4
Author(s): Benjamin Souferi, Mark M. Emerson
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pntd.0007352

The most abundant cyst wall proteins of Acanthamoeba castellanii are lectins that bind cellulose and localize to distinct structures in developing and mature cyst walls
Cited by: 17
Author(s): Pamela Magistrado-Coxen, Yousuf Aqeel, Angelo Lopez, John R. Haserick, Breeanna R. Urbanowicz, Catherine E. Costello, John Samuelson
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pgen.1004066

ComEA Is Essential for the Transfer of External DNA into the Periplasm in Naturally Transformable Vibrio cholerae Cells
Cited by: 96
Author(s): Patrick Seitz, Hassan Pezeshgi Modarres, Sandrine Borgeaud, Roman D. Bulushev, Lorenz J. Steinbock, Aleksandra Radenović, Matteo Dal Peraro, Melanie Blokesch
Software Mentions: 2
Published: almost 12 years ago

10.1016/j.molcel.2021.03.020

Non-canonical autophagy drives alternative ATG8 conjugation to phosphatidylserine
Cited by: 84
Author(s): Joanne Durgan, Alf Håkon Lystad, Katherine E. Sloan, Sven R. Carlsson, Michael Wilson, Elena Marcassa, Rachel Ulferts, Judith Webster, Andrea F. Lopez-Clavijo, Michael J.O. Wakelam, Rupert Beale, Anne Simonsen, David Oxley, Oliver Florey
Software Mentions: 2
Published: over 4 years ago

10.1186/s12964-020-00630-w

Inhibition of αvβ3 integrin impairs adhesion and uptake of tumor-derived small extracellular vesicles
Cited by: 36
Author(s): Wanessa Fernanda Altei, Bianca Cruz Pachane, Patty Karina dos Santos, Lígia Nunes de Morais Ribeiro, Bong Hwan Sung, Alissa M. Weaver, Heloísa Sobreiro Selistre-de-Araújo
Software Mentions: 2
Published: about 5 years ago

10.1038/s41419-020-2556-3

Galectin-3 modulates epithelial cell adaptation to stress at the ER-mitochondria interface
Cited by: 19
Author(s): Lucie Coppin, Arnaud Jannin, Emilie Ait Yahya, C. Thuillier, Céline Villenet, Meryem Tardivel, Antonino Bongiovanni, Cécile Gaston, Simon de Beco, Nicolas Barois, Isabelle Van Seuningen, Emmanuelle Durand, Amélie Bonnefond, Jean-Claude Vienne, Jòseph Vamecq, Martin Figeac, Audrey Vincent, Delphine Delacour, Nicole Porchet, Pascal Pigny
Software Mentions: 2
Published: over 5 years ago

10.3390/metabo11090571

Unravelling the Puzzle of Anthranoid Metabolism in Living Plant Cells Using Spectral Imaging Coupled to Mass Spectrometry
Cited by: 1
Author(s): Quentin Chevalier, Jean-Baptiste Gallé, Nicolas Wasser, Valérie Mazan, Claire Villette, Jérôme Mutterer, Maria Mercedes Elustondo, Nicolas Girard, Mourad Elhabiri, Hubert Schaller, Andréa Hemmerlin, Catherine Vonthron-Sénécheau
Software Mentions: 2
Published: about 4 years ago

10.1128/MCB.00398-17

Creation of Stable Heterothallic Strains of Komagataella phaffii Enables Dissection of Mating Gene Regulation
Cited by: 19
Author(s): Lina Heistinger, Brigitte Gasser, Diethard Mattanovich
Software Mentions: 2
Published: almost 8 years ago

10.1371/journal.pgen.1007795

A single class of ARF GTPase activated by several pathway-specific ARF-GEFs regulates essential membrane traffic in Arabidopsis
Cited by: 25
Author(s): Manoj K. Singh, Sandra Richter, Hauke Beckmann, Marika Kientz, York‐Dieter Stierhof, Nadine Anders, Florian Fäßler, Michael L. Nielsen, Christian Knöll, Alexis Thomann, Mirita Franz‐Wachtel, Boris Maček, Karen Skriver, Peter Pimpl, Gerd Jürgens
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pcbi.1002671

Sub-diffraction Limit Localization of Proteins in Volumetric Space Using Bayesian Restoration of Fluorescence Images from Ultrathin Specimens
Cited by: 22
Author(s): Gordon Wang, Stephen J. Smith
Software Mentions: 2
Published: about 13 years ago

10.1371/journal.pgen.1007851

Meiosis-specific prophase-like pathway controls cleavage-independent release of cohesin by Wapl phosphorylation
Cited by: 31
Author(s): Kiran Challa, Ghanim Fajish, Miki Shinohara, Franz Klein, Susan M. Gasser, Atsushi Shinohara
Software Mentions: 2
Published: almost 7 years ago

10.1186/s13007-019-0406-z

Multicolour three dimensional structured illumination microscopy of immunolabeled plant microtubules and associated proteins
Cited by: 18
Author(s): Tereza Vavrdová, Olga Šamajová, Pavel Křenek, Miroslav Ovečka, Pavlína Floková, R. Šnaurová, Jozef Šamaj, George Komis
Software Mentions: 2
Published: over 6 years ago

10.1007/s00401-017-1783-x

Changes in chromatin state reveal ARNT2 at a node of a tumorigenic transcription factor signature driving glioblastoma cell aggressiveness
Cited by: 19
Author(s): Alexandra Bogeas, Ghislaine Morvan-Dubois, Elias A. El-Habr, François Lejeune, Matthieu Defrance, Ashwin Narayanan, Klaudia Kuranda, Fanny Burel‐Vandenbos, Salwa Sayd, Virgile Delaunay, Luiz Gustavo Dubois, Hugues Parrinello, Stéphanie Rialle, Sylvie Fabrega, Ahmed Idbaïh, Jacques Haiech, Ivan Bièche, Thierry Virolle, Michèle Goodhardt, Hervé Chneiweiss, Marie Pierre Junier
Software Mentions: 2
Published: almost 8 years ago

10.1371/journal.pbio.3001148

Molecular basis of F-actin regulation and sarcomere assembly via myotilin
Cited by: 9
Author(s): Július Košťan, Miha Pavšič, Vid Puž, Thomas C. Schwarz, Friedel Drepper, Sibylle Molt, Melissa A. Graewert, Claudia Schreiner, Sara Sajko, Peter F.M. van der Ven, Adekunle Onipe, Dmitri I. Svergun, Bettina Warscheid, Robert Konrat, Dieter O. Fürst, Brigita Lenarčič, Kristina Djinović-Carugo
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pgen.1005998

Arabidopsis AtMORC4 and AtMORC7 Form Nuclear Bodies and Repress a Large Number of Protein-Coding Genes
Cited by: 37
Author(s): C. Jake Harris, Dylan Husmann, Wanlu Liu, Farid El Kasmi, Haifeng Wang, Ashot Papikian, William A. Pastor, Guillaume Moissiard, Ajay A. Vashisht, Jeffery L. Dangl, James A. Wohlschlegel, Steven E. Jacobsen
Software Mentions: 2
Published: over 9 years ago

10.1038/s41422-018-0080-0

STAT3 associates with vacuolar H+-ATPase and regulates cytosolic and lysosomal pH
Cited by: 74
Author(s): Bin Liu, Johan Palmfeldt, Lin Lin, Alexandria Colaço, Kim Katrine Bjerring Clemmensen, Jinrong Huang, Fengping Xu, Xin Liu, Kenji Maeda, Yonglun Luo, Marja Jäättelä
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0250262

Neonatal valproic acid exposure produces altered gyrification related to increased parvalbumin-immunopositive neuron density with thickened sulcal floors
Cited by: 6
Author(s): Kazuhiko Sawada, Shiori Kamiya, Ichio Aoki
Software Mentions: 2
Published: over 4 years ago

10.3390/cells8101146

Tubulin-Dependent Transport of Connexin-36 Potentiates the Size and Strength of Electrical Synapses
Cited by: 12
Author(s): Cherie Alicia Brown, Cristiane del Corsso, Christiane Zoidl, Logan W. Donaldson, David C. Spray, Georg Zoidl
Software Mentions: 2
Published: about 6 years ago

10.3390/molecules25071655

A Tryptophan Metabolite, 8-Hydroxyquinaldic Acid, Exerts Antiproliferative and Anti-Migratory Effects on Colorectal Cancer Cells
Cited by: 17
Author(s): Katarzyna Walczak, Ewa Langner, Karolina Szalast, Anna Makuch-Kocka, Piotr Pożarowski, Tomasz Plech
Software Mentions: 2
Published: over 5 years ago

10.12688/f1000research.16802.1

An in vitro model for studying CNS white matter: functional properties and experimental approaches
Cited by: 12
Author(s): Silvia Bijland, Gemma Thomson, Matthew Euston, Kyriakos Michail, Katja Thümmler, Steve Mücklisch, Colin L. Crawford, Susan C. Barnett, Marκ McLaughlin, Thomas Anderson, Christopher Linington, Euan R. Brown, Eric R. Kalkman, Julia M. Edgar
Software Mentions: 2
Published: almost 7 years ago

10.1083/jcb.201903125

CDK2 regulates the NRF1/Ehmt1 axis during meiotic prophase I
Cited by: 9
Author(s): Nathan Palmer, S. Zakiah A. Talib, Chandrahas Koumar Ratnacaram, Diana Low, Xavier Bisteau, Joanna H.S. Lee, Elisabeth Pfeiffenberger, Heike Wollmann, Joel Heng Loong Tan, Sheena Wee, Radoslaw M. Sobota, Jayantha Gunaratne, Daniel M. Messerschmidt, Ernesto Guccione, Philipp Kaldis
Software Mentions: 2
Published: over 6 years ago

10.15252/emmm.202012651

Therapeutic development of group B Streptococcus meningitis by targeting a host cell signaling network involving EGFR
Cited by: 7
Author(s): Ning Zhu, Chengxian Zhang, Atish Prakash, Hangping Zheng, Wei Liu, Weifeng She, Andrew J. Morris, Kwang Sik Kim
Software Mentions: 2
Published: almost 5 years ago

10.1128/IAI.00537-19

Proximity Labeling To Map Host-Pathogen Interactions at the Membrane of a Bacterium-Containing Vacuole in Chlamydia trachomatis-Infected Human Cells
Cited by: 21
Author(s): Macy G. Olson, Ray E. Widner, Lisa M. Jorgenson, Alyssa Lawrence, Dragana Lagundžin, Nicholas T. Woods, Scot P. Ouellette, Elizabeth A. Rucks
Software Mentions: 2
Published: about 6 years ago

10.1167/iovs.62.6.20

The Predictive Role of Thyroid Hormone Levels for Early Diabetic Retinal Changes in Experimental Rat and Human Diabetes
Cited by: 2
Author(s): Anna Énzsöly, Rozina Ida Hajdú, Zsolt Turóczi, Irén Szalai, Erika Tátrai, Fanni Pálya, Zoltán Zsolt Nagy, Csaba Mátyás, Attila Oláh, Tamás Radovits, Klaudia Szabó, Bulcsú Dékány, Arnold Szabó, Ákos Kusnyerik, Petra Soltész, Dániel Sándor Veres, Anikó Somogyi, Gábor Márk Somfai, Ákos Lukáts
Software Mentions: 2
Published: over 4 years ago

10.1083/jcb.201904113

ALIX- and ESCRT-III–dependent sorting of tetraspanins to exosomes
Cited by: 188
Author(s): Jorge Larios, Vincent Mercier, Aurélien Roux, Jean Grüenberg
Software Mentions: 2
Published: over 5 years ago

10.1186/s40425-019-0673-2

Diverse immunotherapies can effectively treat syngeneic brainstem tumors in the absence of overt toxicity
Cited by: 10
Author(s): Matthew Schuelke, Phonphimon Wongthida, Jill Thompson, Timothy Kottke, Christopher B. Driscoll, Amanda L. Huff, Kevin G. Shim, Matt Coffey, José S. Pulido, Laura Evgin, Richard G. Vile
Software Mentions: 2
Published: over 6 years ago

10.12688/f1000research.10336.2

Validation of commercially available sphingosine kinase 2 antibodies for use in immunoblotting, immunoprecipitation and immunofluorescence
Cited by: 1
Author(s): Heidi A. Neubauer, Stuart M. Pitson
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-018-27548-1

Cell wall associated protein TasA provides an initial binding component to extracellular polysaccharides in dual-species biofilm
Cited by: 22
Author(s): Danielle Duanis-Assaf, Tal Duanis‐Assaf, Gang Zeng, Rikke Louise Meyer, Meital Reches, Doron Steinberg, Moshe Shemesh
Software Mentions: 2
Published: over 7 years ago

10.1155/2021/5511841

Robust Plasma Cell Response to Skin-Inoculated Dengue Virus in Mice
Cited by: 0
Author(s): Raúl Antonio Maqueda-Alfaro, Edith Marcial‐Juárez, Juana Calderón‐Amador, Julio García‐Cordero, Mariana C Orozco-Uribe, Felipe Hernández-Cázares, Uziel Medina-Pérez, Luvia Enid Sánchez-Torres, Adriana Flores‐Langarica, Leticia Cedillo‐Barrón, Juan Carlos Yam‐Puc, Leopoldo Flores‐Romo
Software Mentions: 2
Published: over 4 years ago

10.7150/thno.49121

Neutrophils infiltrate into the spiral ligament but not the stria vascularis in the cochlea during lipopolysaccharide-induced inflammation
Cited by: 14
Author(s): Seong Hoon Bae, Jee Eun Yoo, Young Ho Choe, Sang Hyun Kwak, Jae Young Choi, Jinsei Jung, Young Youl Hyun
Software Mentions: 2
Published: almost 5 years ago

10.1098/rsif.2014.1111

Micro- and nano-structural details of a spider's filter for substrate vibrations: relevance for low-frequency signal transmission
Cited by: 32
Author(s): Maxim Erko, Osnat Younes‐Metzler, Alexander Rack, Paul Zaslansky, Seth L. Young, Garrett Milliron, Marius Chyasnavichyus, Friedrich G. Barth, Peter Fratzl, Vladimir V. Tsukruk, Igor Zlotnikov, Yael Politi
Software Mentions: 2
Published: over 10 years ago

10.3389/fnsyn.2017.00013

Activity-Dependent Phosphorylation by CaMKIIδ Alters the Ca2+ Affinity of the Multi-C2-Domain Protein Otoferlin
Cited by: 12
Author(s): Sandra Meese, A. Cepeda, Felix Gahlen, Christopher M. Adams, Ralf Ficner, Anthony J. Ricci, Stefan Heller, Ellen Reisinger, Meike Herget
Software Mentions: 2
Published: about 8 years ago

10.1242/dmm.023366

Deregulated expression of HDAC9 in B-cells promotes development of lymphoproliferative disease and lymphoma
Cited by: 34
Author(s): Veronica Gil, Govind Bhagat, Louise Howell, Jiyuan Zhang, Chae Hwa Kim, Sven Stengel, Francisco Vega, Arthur Zelent, Kevin Petrie
Software Mentions: 2
Published: almost 10 years ago

10.1038/s41598-018-27657-x

Zebrafish mutants and TEAD reporters reveal essential functions for Yap and Taz in posterior cardinal vein development
Cited by: 37
Author(s): Matteo Astone, Jason Kuan Han Lai, Sirio Dupont, Didier Y. R. Stainier, Francesco Argenton, Andrea Vettori
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-018-29240-w

Urine-derived cells: a promising diagnostic tool in Fabry disease patients
Cited by: 22
Author(s): Gisela G. Slaats, Fabian Braun, Martin Hoehne, Laura E. Frech, Linda Blomberg, Thomas Benzing, Bernhard Schermer, Markus M. Rinschen, Christine Kurschat
Software Mentions: 2
Published: over 7 years ago

10.1172/jci.insight.97228

PTEN deficiency promotes pathological vascular remodeling of human coronary arteries
Cited by: 25
Author(s): Karen S. Moulton, Marcella Li, Keith A. Strand, Shawna Burgett, Penn McClatchey, Rebecca M. Tucker, Seth B. Furgeson, Sizhao Lu, Bruce E. Kirkpatrick, Joseph C. Cleveland, Raphael A. Nemenoff, Amrut V. Ambardekar, Mary C.M. Weiser‐Evans
Software Mentions: 2
Published: over 7 years ago

10.1128/JVI.01251-18

In Vivo Persistence of Chimeric Virus after Substitution of the Kaposi's Sarcoma-Associated Herpesvirus LANA DNA Binding Domain with That of Murid Herpesvirus 4
Cited by: 8
Author(s): Marta Pires de Miranda, Ana Patrícia Quendera, Colin E. McVey, Kenneth M. Kaye, J. Pedro Simas
Software Mentions: 2
Published: about 7 years ago

10.1096/fj.14-255729

Autocrine androgen action is essential for Leydig cell maturation and function, and protects against late‐onset Leydig cell apoptosis in both mice and men
Cited by: 72
Author(s): Laura O’Hara, Kerry J. McInnes, Ioannis Simitsidellis, Stephanie Morgan, Nina Atanassova, Jolanta Słowikowska-Hilczer, Krzysztof Kula, Maria Szarras‐Czapnik, Louise Milne, Rod T Mitchell, Lee B. Smith
Software Mentions: 2
Published: almost 11 years ago

10.1128/JVI.00477-18

Persistent Replication of a Chikungunya Virus Replicon in Human Cells Is Associated with Presence of Stable Cytoplasmic Granules Containing Nonstructural Protein 3
Cited by: 25
Author(s): Roland Remenyi, Yanni Gao, Ruth E Hughes, Alistair Curd, Carsten Zothner, Michelle Peckham, Andres Merits, Mark Harris
Software Mentions: 2
Published: about 7 years ago

10.3389/fvets.2020.584948

Protein Cargo of Extracellular Vesicles From Bovine Follicular Fluid and Analysis of Their Origin From Different Ovarian Cells
Cited by: 19
Author(s): Svetlana Uzbekova, Carmen Almiñana, Valérie Labas, Ana-Paula Teixeira-Gomes, Lucie Combes‐Soia, Guillaume Tsikis, Anaïs Vitorino Carvalho, Rustem Uzbekov, Г. Н. Сингина
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41398-019-0590-7

Precocious myelination in a mouse model of autism
Cited by: 20
Author(s): Maryam Khanbabaei, Elizabeth D. Hughes, Jacob Ellegood, Lily R. Qiu, Raven Yip, Jenna Dobry, Kartikeya Murari, Jason P. Lerch, Jong M. Rho, Ning Cheng
Software Mentions: 2
Published: about 6 years ago

10.1172/jci.insight.140669

Tristetraprolin expression by keratinocytes protects against skin carcinogenesis
Cited by: 8
Author(s): Assiya Assabban, Ingrid Dubois-Vedrenne, Laurye Van Maele, Rosalba Salcedo, Brittany L. Snyder, Long Zhou, Abdulkader Azouz, Bérengère de Toeuf, Gaëlle Lapouge, Caroline La, Maxime Melchior, Muriel Nguyen, Séverine Thomas, Shu Fen Wu, Wenqian Hu, Véronique Kruys, Cédric Blanpain, Giorgio Trinchieri, Cyril Gueydan, Perry J. Blackshear, Stanislas Goriely
Software Mentions: 2
Published: over 4 years ago

10.7554/eLife.13964

ERG signaling in prostate cancer is driven through PRMT5-dependent methylation of the Androgen Receptor
Cited by: 57
Author(s): Zineb Mounir, Joshua M. Korn, Thomas Westerling, Fallon Lin, C.A. Kirby, Markus Schirle, Gregg McAllister, Greg Hoffman, Nadire Ramadan, Anke Hartung, Feng Yuan, D. Randal Kipp, Christopher Quinn, Michelle Fodor, Jason R. Baird, Marie Schoumacher, Ronald A. Meyer, James Deeds, Gilles Buchwalter, Travis Stams, Nicholas Keen, William R. Sellers, Myles Brown, Raymond Pagliarini
Software Mentions: 2
Published: over 9 years ago

10.7554/eLife.59384

Toxoplasma TgATG9 is critical for autophagy and long-term persistence in tissue cysts
Cited by: 21
Author(s): David W. Smith, Geetha Kannan, Isabelle Coppens, Feng-Rong Wang, Hoa Mai Nguyen, Aude Cerutti, Einar B. Ólafsson, Patrick A Rimple, Tracey L. Schultz, Nayanna M Mercado Soto, Manlio Di Cristina, Sébastien Besteiro, Vern B. Carruthers
Software Mentions: 2
Published: over 4 years ago

10.1186/s13072-019-0300-y

TH2BS11ph histone mark is enriched in the unsynapsed axes of the XY body and predominantly associates with H3K4me3-containing genomic regions in mammalian spermatocytes
Cited by: 4
Author(s): Iyer Aditya Mahadevan, Satyakrishna Pentakota, Raktim Roy, Utsa Bhaduri, Rao M
Software Mentions: 2
Published: about 6 years ago

10.7554/eLife.38433

Structural relationship between the putative hair cell mechanotransduction channel TMC1 and TMEM16 proteins
Cited by: 80
Author(s): Ángela Ballesteros, Cristina Fenollar–Ferrer, Kenton J. Swartz
Software Mentions: 2
Published: over 7 years ago

10.15252/emmm.201607461

<scp>SPINK</scp>2 deficiency causes infertility by inducing sperm defects in heterozygotes and azoospermia in homozygotes
Cited by: 92
Author(s): Zine‐Eddine Kherraf, Marie Christou‐Kent, Thomas Karaouzène, Amir Amiri‐Yekta, Guillaume Martinez, Alexandra Vargas, Emeline Lambert, Christelle Borel, Béatrice Dorphin, Isabelle Aknin‐Seifer, Michael J. Mitchell, Catherine Metzler‐Guillemain, Jessica Escoffier, Serge Nef, Mariane Grepillat, Nicolas Thierry‐Mieg, Véronique Satre, M. Bailly, Florence Boitrelle, Karin Pernet‐Gallay, Sylviane Hennebicq, Julien Fauré, Serge P. Bottari, Charles Coutton, Pierre F. Ray, Christophe Arnoult
Software Mentions: 2
Published: over 8 years ago

10.1172/jci.insight.145360

Imaging alloreactive T cells provides early warning of organ transplant rejection
Cited by: 2
Author(s): Toshihito Hirai, Aaron T. Mayer, Tomomi W. Nobashi, Po‐Chun Lin, Zunyu Xiao, Tomokatsu Udagawa, Kinya Seo, Federico Simonetta, Jeanette Baker, Alan G. Cheng, Robert S. Negrin, Sanjiv S. Gambhir
Software Mentions: 2
Published: over 4 years ago

10.1038/s41598-018-32530-y

The Cytotoxic Necrotizing Factor of Yersinia pseudotuberculosis (CNFy) is Carried on Extracellular Membrane Vesicles to Host Cells
Cited by: 14
Author(s): Ajay K. Monnappa, Wasimul Bari, Jeong Kon Seo, Robert J. Mitchell
Software Mentions: 2
Published: about 7 years ago

10.7554/eLife.57656

Aberrant subchondral osteoblastic metabolism modifies NaV1.8 for osteoarthritis
Cited by: 29
Author(s): Jianxi Zhu, Gehua Zhen, Shuai An, Xiao Wang, Mei Wan, Yusheng Li, Zhiyong Chen, Yun Guan, Xinzhong Dong, Yihe Hu, Xu Cao
Software Mentions: 2
Published: over 5 years ago

10.1523/ENEURO.0103-18.2018

Estradiol Drives the Anorexigenic Activity of Proopiomelanocortin Neurons in Female Mice
Cited by: 34
Author(s): Todd L. Stincic, Pasha Grachev, Martha A. Bosch, Oline K. Rønnekleiv, Martin J. Kelly
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-018-32795-3

Dysregulation of the endothelin pathway in lymphangioleiomyomatosis with no direct effect on cell proliferation and migration
Cited by: 3
Author(s): Nader Chebib, Fabienne Archer, Alexandra Bobet-Erny, Caroline Leroux, Vincent Cottin
Software Mentions: 2
Published: about 7 years ago

10.1523/ENEURO.0171-21.2021

Glycogen Synthase Kinase 3 Regulates the Genesis of Displaced Retinal Ganglion Cells3
Cited by: 5
Author(s): Elena Kisseleff, Robin Vigouroux, Catherine Hottin, Sophie Lourdel, Leah Thomas, Palak Shah, Alain Chédotal, Muriel Perron, Anand Swaroop, Jérôme E. Roger
Software Mentions: 2
Published: about 4 years ago

10.1038/s41598-018-33475-y

Mechanisms Underlying the Regulation of HP1γ by the NGF-PKA Signaling Pathway
Cited by: 3
Author(s): Seungmae Seo, Angela Mathison, Adrienne Grzenda, Jewel L. Podratz, Ézéquiel Calvo, Stephen Brimijoin, Anthony J. Windebank, Juan Iovanna, Gwen Lomberk, Raúl Urrutia
Software Mentions: 2
Published: about 7 years ago

10.1111/jcmm.15011

Down‐regulation of endothelial protein C receptor promotes preeclampsia by affecting actin polymerization
Cited by: 6
Author(s): Hao Wang, Pan Wang, Xiaoling Liang, Wenjing Li, Mei Yang, Jinlong Ma, Yunrong Wei, Shangrong Fan
Software Mentions: 2
Published: almost 6 years ago

10.1523/ENEURO.0020-14.2015

A Neuronal Activity-Dependent Dual Function Chromatin-Modifying Complex RegulatesArcExpression
Cited by: 26
Author(s): Nicodemus Edrick Oey, How Wing Leung, Rajaram Ezhilarasan, Lanlan Zhou, Roger W. Beuerman, Hendrika M.A. VanDongen, Antonius M.J. VanDongen
Software Mentions: 2
Published: almost 11 years ago

10.15252/emmm.202013549

Flow cytometry multiplexed method for the detection of neutralizing human antibodies to the native SARS‐CoV‐2 spike protein
Cited by: 26
Author(s): Lydia Horndler, Pilar Delgado, David Abia, Ivaylo Balabanov, Pedro Martínez‐Fleta, Georgina H. Cornish, Miguel Ángel Llamas, Sergio Serrano‐Villar, Francisco Sánchez-Madrid, Manuel Fresno, Hisse M. van Santen, Balbino Alarcón
Software Mentions: 2
Published: over 4 years ago

10.1128/mBio.02135-18

PAS Domain Protein Pas3 Interacts with the Chromatin Modifier Bre1 in Regulating Cryptococcal Morphogenesis
Cited by: 16
Author(s): Youbao Zhao, Srijana Upadhyay, Xiaorong Lin
Software Mentions: 2
Published: almost 7 years ago

10.1186/s12974-019-1447-y

Systemic administration of orexin A ameliorates established experimental autoimmune encephalomyelitis by diminishing neuroinflammation
Cited by: 29
Author(s): Laurine Becquet, Catalina Abad, M. Leclercq, Camille Miel, Jean Lesné, Gaétan Riou, Alain Couvineau, Olivier Boyer, Yossan‐Var Tan
Software Mentions: 2
Published: over 6 years ago

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