pypi: STAMP | Projects | Ecosyste.ms: Papers

10.1186/s13099-016-0099-z

Global investigation of composition and interaction networks in gut microbiomes of individuals belonging to diverse geographies and age-groups
Cited by: 28
Author(s): Deepak Yadav, Tarini Shankar Ghosh, Sharmila S. Mande
Software Mentions: 1
Published: over 8 years ago

10.3390/ijerph14060555

Ephedra-Treated Donor-Derived Gut Microbiota Transplantation Ameliorates High Fat Diet-Induced Obesity in Rats
Cited by: 27
Author(s): Jing-Hua Wang, Bongsoo Kim, Kyungsun Han, Hojun Kim
Software Mentions: 1
Published: over 7 years ago

10.1016/j.heliyon.2019.e02480

Are the gut microbial systems of giant pandas unstable?
Cited by: 15
Author(s): Ru Yao, Yang Zhang, Zheng Zhang, Ting Hu, Hua Chen, Feng Huang, Xun Gu, Xiangdong Yang, Guoqing Lu, Lifeng Zhu
Software Mentions: 1
Published: about 5 years ago

10.1016/j.heliyon.2019.e03089

Diversity of Betaproteobacteria revealed by novel primers suggests their role in arsenic cycling
Cited by: 12
Author(s): Anirban Chakraborty, Chandan Dasgupta, Punyasloke Bhadury
Software Mentions: 1
Published: almost 5 years ago

10.1002/hep.30661

Enhanced Microbial Bile Acid Deconjugation and Impaired Ileal Uptake in Pregnancy Repress Intestinal Regulation of Bile Acid Synthesis
Cited by: 32
Author(s): Caroline Ovadia, Alvaro Perdones‐Montero, Konstantina Spagou, Ann Smith, Magali Sarafian, María José Gómez-Romero, Elena Bellafante, Louise C. Clarke, Fouzia Sadiq, Vanya Nikolova, Alice Mitchell, Peter H. Dixon, Natalie Santa‐Pinter, Annika Wahlström, Shadi Abu‐Hayyeh, Julian R.F. Walters, Hanns‐Ulrich Marschall, Elaine Holmes, Julian R. Marchesi, Catherine Williamson
Software Mentions: 1
Published: over 5 years ago

10.3390/ijerph15040714

A Socio-Technical Exploration for Reducing & Mitigating the Risk of Retained Foreign Objects
Cited by: 9
Author(s): Siobhán Corrigan, Alison Kay, Katie O’Byrne, Dubhfeasa Slattery, Sharon R. Sheehan, Nick McDonald, David Smyth, K. Mealy, Sam Cromie
Software Mentions: 1
Published: over 6 years ago

10.3390/ijerph15092017

The Early Recognition and Management of Sepsis in Sub-Saharan African Adults: A Systematic Review and Meta-Analysis
Cited by: 19
Author(s): Ben Morton, Marie Stolbrink, Wanjiku Kagima, Jamie Rylance, Kevin Mortimer
Software Mentions: 1
Published: about 6 years ago

10.1002/mbo3.429

Metagenomic profiling of gut microbial communities in both wild and artificially reared Bar‐headed goose (Anser indicus)
Cited by: 28
Author(s): Wen Wang, Sisi Zheng, Kirill Sharshov, Hao Sun, Yang Fang, Xuelian Wang, Laixing Li, Zhi‐Xiong Jim Xiao
Software Mentions: 1
Published: almost 8 years ago

10.3390/ijerph16020221

Impacts of Lean Construction on Safety Systems: A System Dynamics Approach
Cited by: 25
Author(s): Xiuyu Wu, Hongping Yuan, Ge Wang, Shuquan Li, Guangdong Wu
Software Mentions: 1
Published: almost 6 years ago

10.3390/nu11020236

Prevalence of Malnutrition in Pediatric Hospitals in Developed and In-Transition Countries: The Impact of Hospital Practices
Cited by: 44
Author(s): Andréa McCarthy, Edgar Delvin, Valérie Marcil, Véronique Bélanger, Valérie Marchand, Dana Boctor, Mohsin Rashid, Angela Noble, Bridget Davidson, Véronique Groleau, Schohraya Spahis, Claude Roy, Émile Lévy
Software Mentions: 1
Published: almost 6 years ago

10.1186/s40104-020-00490-x

Intrauterine growth restriction alters growth performance, plasma hormones, and small intestinal microbial communities in growing-finishing pigs
Cited by: 20
Author(s): Xiong Li, Jinming You, Wanghong Zhang, Qian Zhu, François Blachier, Yulong Yin, Xiangfeng Kong
Software Mentions: 1
Published: over 4 years ago

10.3390/ijerph17010011

Cause Analysis of Unsafe Behaviors in Hazardous Chemical Accidents: Combined with HFACs and Bayesian Network
Cited by: 22
Author(s): Xiaowei Li, Tiezhong Liu, Yongkui Liu
Software Mentions: 1
Published: almost 5 years ago

10.1002/mbo3.169

Taxonomic and functional profiles of soil samples from Atlantic forest and Caatinga biomes in northeastern Brazil
Cited by: 46
Author(s): Ralfo G. Pacchioni, Fabíola Marques de Carvalho, Claudia Elizabeth Thompson, André Luís Fonseca Faustino, Fernanda Nicolini, Tatiana da Silva Pereira, Rita C. B. Silva, Maurício Egídio Cantão, Alexandra Lehmkuhl Gerber, Ana Tereza Ribeiro de Vasconcelos, Lucymara Fassarella Agnez-Lima
Software Mentions: 1
Published: over 10 years ago

10.1007/s13353-017-0418-1

The metagenomic approach to characterization of the microbial community shift during the long-term cultivation of anammox-enriched granular sludge
Cited by: 14
Author(s): Sławomir Ciesielski, Krzysztof Czerwionka, Dominika Sobotka, Tomasz Dulski, Jacek Mąkinia
Software Mentions: 1
Published: almost 7 years ago

10.1264/jsme2.ME16067

Effects of Predation by Protists on Prokaryotic Community Function, Structure, and Diversity in Anaerobic Granular Sludge
Cited by: 20
Author(s): Yuga Hirakata, Mamoru Oshiki, Kyohei Kuroda, Masashi Hatamoto, Kengo Kubota, Takashi Yamaguchi, Hideki Harada, Nobuo Araki
Software Mentions: 1
Published: almost 9 years ago

10.3390/ijerph17041266

Rhizosphere Bacterial Community Structure and Predicted Functional Analysis in the Water-Level Fluctuation Zone of the Danjiangkou Reservoir in China During the Dry Period
Cited by: 6
Author(s): Zhaojin Chen, Yang Shao, Yingjun Li, Longshan Lin, Yan Chen, Wei Tian, Bai-Lian Li, Yuying Li
Software Mentions: 1
Published: almost 5 years ago

10.3164/jcbn.17-44

Prediction of functional profiles of gut microbiota from 16S rRNA metagenomic data provides a more robust evaluation of gut dysbiosis occurring in Japanese type 2 diabetic patients
Cited by: 81
Author(s): Ryo Inoüe, Ryuji Ohue‐Kitano, Takamitsu Tsukahara, Masashi Tanaka, Shinji Masuda, Takayuki Inoue, Hajime Yamakage, Toru Kusakabe, Koji Hasegawa, Akira Shimatsu, Noriko Satoh‐Asahara
Software Mentions: 1
Published: almost 8 years ago

10.1264/jsme2.ME14028

The Bacterial Community Structure of Hydrocarbon-Polluted Marine Environments as the Basis for the Definition of an Ecological Index of Hydrocarbon Exposure
Cited by: 26
Author(s): Mariana Lozada, Magalí S. Marcos, Marta Commendatore, Mónica N. Gil, Hebe M. Dionisi
Software Mentions: 1
Published: almost 11 years ago

10.1186/s12934-021-01548-9

The role of the gut microbiota on the metabolic status of obese children
Cited by: 23
Author(s): Xin Yuan, Ruimin Chen, Kenneth McCormick, Ying Zhang, Xiaoqin Lin, Xiaohong Yang
Software Mentions: 1
Published: over 3 years ago

10.3390/ijerph17114114

Exploring the Underlying Causes of Chinese Eastern Star, Korean Sewol, and Thai Phoenix Ferry Accidents by Employing the HFACS-MA
Cited by: 8
Author(s): Xiaolong Wang, Boling Zhang, Xu Zhao, Lulu Wang, Ruipeng Tong
Software Mentions: 1
Published: over 4 years ago

10.3390/jcm8040451

H. pylori Eradication Treatment Alters Gut Microbiota and GLP-1 Secretion in Humans
Cited by: 41
Author(s): Isabel Cornejo‐Pareja, Gracia María Martín‐Núñez, M. M. Roca-Rodríguez, Fernando Cardona, Leticia Coín‐Aragüez, Lidia Sánchez-Alcoholado, Carolina Gutiérrez-Repiso, Araceli Muñoz-Garach, José Carlos Fernández‐García, Isabel Moreno-Indias, Francisco J. Tinahones
Software Mentions: 1
Published: over 5 years ago

10.3390/ijerph17145120

Evaluation of Changes in Gut Microbiota in Patients with Crohn’s Disease after Anti-Tnfα Treatment: Prospective Multicenter Observational Study
Cited by: 5
Author(s): Laura Sanchis-Artero, Juan F. Martínez-Blanch, Sergio Manresa-Vera, Ernesto Cortés‐Castell, Josefa Rodríguez-Morales, Xavier Cortés-Rizo
Software Mentions: 1
Published: over 4 years ago

10.3390/ijerph17176217

Analysis of Human Factors Relationship in Hazardous Chemical Storage Accidents
Cited by: 8
Author(s): Wei Jiang, Wei Han, Jiankai Zhou, Zhishun Huang
Software Mentions: 1
Published: about 4 years ago

10.1111/1751-7915.13876

A microbial consortium‐based product promotes potato yield by recruiting rhizosphere bacteria involved in nitrogen and carbon metabolisms
Cited by: 5
Author(s): Zhenshuo Wang, Yan Li, Yu Zhao, Lubo Zhuang, Yue Yu, Mengyao Wang, Jia Liu, Qi Wang
Software Mentions: 1
Published: over 3 years ago

10.3390/ijerph18094841

Study Protocol of a Multicenter Randomized Controlled Trial to Tackle Obesity through a Mediterranean Diet vs. a Traditional Low-Fat Diet in Adolescents: The MED4Youth Study
Cited by: 1
Author(s): Noemí Boqué, Lucía Tarro, Alice Rosi, Helena Torrell, Guillermo Saldaña, Elisa Luengo, Zeev Rachman, António Pires, Nuno Tiago Tavares, António Pires, Maria Filomena Botelho, Pedro Mena, Francesca Scazzina, Daniele Del Rio, Antoni Caimari
Software Mentions: 1
Published: over 3 years ago

10.1111/1751-7915.13261

Yeast culture dietary supplementation modulates gut microbiota, growth and biochemical parameters of grass carp
Cited by: 30
Author(s): Lirong Han, Juntao Li, Xianwu Guo, Yunxiang Liang, Weimin Wang
Software Mentions: 1
Published: over 6 years ago

10.3390/ani10030522

Effects of Alternative Administration Programs of a Synbiotic Supplement on Broiler Performance, Foot Pad Dermatitis, Caecal Microbiota, and Blood Metabolites
Cited by: 6
Author(s): Giorgio Brugaletta, Alessandra De Cesare, Marco Zampiga, Luca Laghi, Chiara Oliveri, Chenglin Zhu, Gerardo Manfreda, Basharat Syed, Luis Valenzuela, Federico Sirri
Software Mentions: 1
Published: over 4 years ago

10.1093/jxb/erw275

Systems analysis ofcis-regulatory motifs in C4photosynthesis genes using maize and rice leaf transcriptomic data during a process of de-etiolation
Cited by: 16
Author(s): Jiajia Xu, Andrea Bräutigam, Andreas P.M. Weber, Xin‐Guang Zhu
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.ppat.1001165

Identification and Genome-Wide Prediction of DNA Binding Specificities for the ApiAP2 Family of Regulators from the Malaria Parasite
Cited by: 218
Author(s): Tracey L. Campbell, Erandi K. De Silva, Kellen L. Olszewski, Olivier Elemento, Manuel Llinás
Software Mentions: 1
Published: about 14 years ago

10.1111/1751-7915.13672

Bacillus subtilis and Enterococcus faecium co‐fermented feed regulates lactating sow's performance, immune status and gut microbiota
Cited by: 17
Author(s): Cheng Wang, Siyu Wei, Bocheng Xu, Lihong Hao, Weixu Su, Mingliang Jin, Yizhen Wang
Software Mentions: 1
Published: about 4 years ago

10.4317/medoral.23766

Bacteria associated with periodontal disease are also increased in health
Cited by: 6
Author(s): Jesús López-Martínez, Natalia Chueca, Miguel Padial‐Molina, J-A Fernandez-Caballero, Fredy Gamboa Luis Garcia Mayra Martinez Alveiro Erira DabeibaAdriana Garcia, Francisco O’Valle, Pablo Galindo‐Moreno
Software Mentions: 1
Published: almost 5 years ago

10.1039/c6ra21040f

Effect of the chemical composition of filter media on the microbial community in wastewater biofilms at different temperatures
Cited by: 19
Author(s): Iffat Naz, Douglas Hodgson, Ann Smith, Julian R. Marchesi, Safia Ahmed, Claudio Avignone–Rossa, Devendra Saroj
Software Mentions: 1
Published: almost 9 years ago

10.3390/md16120498

Effect of Marine Microalga Chlorella pyrenoidosa Ethanol Extract on Lipid Metabolism and Gut Microbiota Composition in High-Fat Diet-Fed Rats
Cited by: 47
Author(s): Xuzhi Wan, Tiantian Li, Dan Liú, Yihan Chen, Yuanyuan Liu, Bin Liu, Huiying Zhang, Chao Zhao
Software Mentions: 1
Published: almost 6 years ago

10.3390/ani10020329

Effects of Thymol and Thymol α-D-Glucopyranoside on Intestinal Function and Microbiota of Weaned Pigs
Cited by: 12
Author(s): Noémie Van Noten, Jeroen Degroote, Elout Van Liefferinge, Bernard Taminiau, Stefaan De Smet, Tom Desmet, Joris Michiels
Software Mentions: 1
Published: almost 5 years ago

10.1186/s12931-018-0959-9

Effects of smoking on the lower respiratory tract microbiome in mice
Cited by: 39
Author(s): Rui Zhang, Ling Chen, Lei Cao, Kangjie Li, Yao Huang, Xiaoqian Luan, Ge Li
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12931-019-1246-0

Dysbiosis of lower respiratory tract microbiome are associated with inflammation and microbial function variety
Cited by: 53
Author(s): Kangjie Li, Zilong Chen, Yao Huang, Rui Zhang, Xiaoqian Luan, Tingting Lei, Ling Chen
Software Mentions: 1
Published: almost 5 years ago

10.1186/s13568-020-01080-w

Microbiome and metabolic changes in milk in response to artemisinin supplementation in dairy cows
Cited by: 11
Author(s): Kun Hou, Jinjin Tong, Hua Zhang, Shan Gao, Guo Yu-qin, Hongyu Niu, Benhai Xiong, Linshu Jiang
Software Mentions: 1
Published: over 4 years ago

10.1038/srep13845

Unveiling the metabolic potential of two soil-derived microbial consortia selected on wheat straw
Cited by: 53
Author(s): Diego Javier Jiménez, Diego Chaves‐Moreno, Jan Dirk van Elsas
Software Mentions: 1
Published: about 9 years ago

10.1080/20016689.2017.1299833

Filling the gap in CNS drug development: evaluation of the role of drug repurposing
Cited by: 27
Author(s): Aleksandra Caban, K. Pisarczyk, Kenneth Kopacz, Anna Kapuśniak, Mondher Toumi, C. Rémuzat, A. Kornfeld
Software Mentions: 1
Published: almost 8 years ago

10.3390/md19030127

Protective Effect of Tuna Bioactive Peptide on Dextran Sulfate Sodium-Induced Colitis in Mice
Cited by: 18
Author(s): Xingwei Xiang, Xiaoling Zhou, Rui Wang, Cong-Han Shu, Yufang Zhou, Xiaoguo Ying, Bin Zheng
Software Mentions: 1
Published: over 3 years ago

10.1007/s41114-017-0004-1

Detection methods for stochastic gravitational-wave backgrounds: a unified treatment
Cited by: 271
Author(s): Joseph D. Romano, N. Cornish
Software Mentions: 1
Published: over 7 years ago

10.1038/srep17997

Energetics of Endotoxin Recognition in the Toll-Like Receptor 4 Innate Immune Response
Cited by: 25
Author(s): Teresa Páramo, Susana Tomasio, Katherine L. Irvine, Clare E. Bryant, Peter J. Bond
Software Mentions: 1
Published: almost 9 years ago

10.3390/life8030029

Metagenomic Analysis of Microbial Community Compositions and Cold-Responsive Stress Genes in Selected Antarctic Lacustrine and Soil Ecosystems
Cited by: 24
Author(s): Hyunmin Koo, Joseph A. Hakim, Casey D. Morrow, Michael R. Crowley, Dale T. Andersen, Asim K. Bej
Software Mentions: 1
Published: over 6 years ago

10.1038/srep19160

Characterizing the Conformational Landscape of Flavivirus Fusion Peptides via Simulation and Experiment
Cited by: 16
Author(s): Jan K. Marzinek, Rajamani Lakshminarayanan, Eunice Tze Leng Goh, Roland G. Huber, Sadhana Panzade, Chandra Verma, Peter J. Bond
Software Mentions: 1
Published: almost 9 years ago

10.1038/srep20111

Enhanced waste activated sludge digestion using a submerged anaerobic dynamic membrane bioreactor: performance, sludge characteristics and microbial community
Cited by: 37
Author(s): Hai‐Sui Yu, Zhiwei Wang, Zhichao Wu, Chaowei Zhu
Software Mentions: 1
Published: almost 9 years ago

10.3390/life11020099

The Alteration of Intestinal Microbiota Profile and Immune Response in Epinephelus coioides during Pathogen Infection
Cited by: 13
Author(s): Joan Tang Xiao Joe, Yung‐Che Tseng, Jen Leih Wu, Ming Lu
Software Mentions: 1
Published: almost 4 years ago

10.1038/srep23012

Metagenomic and functional analyses of the consequences of reduction of bacterial diversity on soil functions and bioremediation in diesel-contaminated microcosms
Cited by: 82
Author(s): Jaejoon Jung, Laurent Philippot, Woojun Park
Software Mentions: 1
Published: over 8 years ago

10.1038/srep23129

Human gut colonisation may be initiated in utero by distinct microbial communities in the placenta and amniotic fluid
Cited by: 768
Author(s): María Carmen Collado, Samuli Rautava, Juhani Aakko, Erika Isolauri, Seppo Salminen
Software Mentions: 1
Published: over 8 years ago

10.1038/srep24723

Gene expression of Lactobacillus plantarum and the commensal microbiota in the ileum of healthy and early SIV-infected rhesus macaques
Cited by: 15
Author(s): Benjamin L. Golomb, Lauren A. Hirao, Satya Dandekar, Maria L. Marco
Software Mentions: 1
Published: over 8 years ago

10.1016/S0140-6736(18)31267-4

Rapid urine-based screening for tuberculosis in HIV-positive patients admitted to hospital in Africa (STAMP): a pragmatic, multicentre, parallel-group, double-blind, randomised controlled trial
Cited by: 147
Author(s): Ankur Gupta-Wright, Elizabeth L. Corbett, Joep J. van Oosterhout, Douglas P. Wilson, Daniel Grint, Melanie Alufandika-Moyo, J Peters, Lingstone Chiume, Clare Flach, Stephen D. Lawn, Katherine Fielding
Software Mentions: 1
Published: over 6 years ago

10.1038/srep27427

Uncovering the composition of microbial community structure and metagenomics among three gut locations in pigs with distinct fatness
Cited by: 116
Author(s): Hui Yang, Xiaowan Huang, Shouguo Fang, Wenshui Xin, Lusheng Huang, Congying Chen
Software Mentions: 1
Published: over 8 years ago

10.1038/srep28211

Genome-wide discovery of G-quadruplex forming sequences and their functional relevance in plants
Cited by: 43
Author(s): Rohini Garg, Jyoti Aggarwal, Bijal Thakkar
Software Mentions: 1
Published: over 8 years ago

10.1080/20016689.2017.1264717

Value added medicines: what value repurposed medicines might bring to society?
Cited by: 16
Author(s): Mondher Toumi, C. Rémuzat
Software Mentions: 1
Published: almost 8 years ago

10.2471/BLT.16.174425

Drowning deaths between 1861 and 2000 in Victoria, Australia
Cited by: 12
Author(s): Carolyn Staines, Joan Ozanne–Smith
Software Mentions: 1
Published: about 8 years ago

10.3390/nu13041279

Malnutrition in Hospitalised Children—An Evaluation of the Efficacy of Two Nutritional Screening Tools
Cited by: 8
Author(s): Christina N. Katsagoni, Olga Cheirakaki, Anastasia Hatzoglou, Ourania Zerva, Alexandra Koulieri, Konstantina Loizou, Emmanouela Vasileiadi, Maria Toilou, Kalliopi-Anna Poulia, Meropi D. Kontogianni
Software Mentions: 1
Published: over 3 years ago

10.1038/srep32467

Specialized Microbiome of a Halophyte and its Role in Helping Non-Host Plants to Withstand Salinity
Cited by: 137
Author(s): Zhuang Youxiang, Irina S. Druzhinina, Jessy Labbé, Regina S. Redman, Yuan Qin, Russell J. Rodriguez, Chulong Zhang, Gerald A. Tuskan, Fu‐Cheng Lin
Software Mentions: 1
Published: about 8 years ago

10.3390/ani11092685

Seasonal Changes in the Distinct Taxonomy and Function of the Gut Microbiota in the Wild Ground Squirrel (Spermophilus dauricus)
Cited by: 5
Author(s): Xiaoying Yang, Yuchen Yao, Xueying Zhang, Jiahui Zhong, Feng Gao, Haolin Zhang, Yingying Han, Qiang Wang, Zhengrong Yuan
Software Mentions: 1
Published: about 3 years ago

10.1038/srep40455

Unraveling the microbial processes of black band disease in corals through integrated genomics
Cited by: 33
Author(s): Yui Sato, Edmund Y. S. Ling, Dmitrij Turaev, Patrick W. Laffy, Karen D. Weynberg, Thomas Rattei, Bette L. Willis, David G. Bourne
Software Mentions: 1
Published: almost 8 years ago

10.1038/srep46160

Dynamics of archaea at fine spatial scales in Shark Bay mat microbiomes
Cited by: 58
Author(s): Hon Lun Wong, Pieter T. Visscher, Richard Allen White, Daniela Lee Smith, Molly M. Patterson, Brendan P. Burns
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-00580-3

Microbial community and metabolic pathway succession driven by changed nutrient inputs in tailings: effects of different nutrients on tailing remediation
Cited by: 22
Author(s): Mingjiang Zhang, Xingyu Liu, Yibin Li, Guangyuan Wang, Zining Wang, Jiankang Wen
Software Mentions: 1
Published: over 7 years ago

10.1093/brain/awx326

A novel human pain insensitivity disorder caused by a point mutation in ZFHX2
Cited by: 31
Author(s): Abdella M. Habib, Ayako Matsuyama, Andrei L. Okorokov, Sonia Santana-Varela, José Brás, Anna Maria Aloisi, Edward C. Emery, Yury Bogdanov, Maryne Follenfant, Sam J Gossage, Mathilde Gras, Jack Humphrey, Anna Kolesnikov, Kim Le Cann, Shengnan Li, Michael S. Minett, Vanessa Pereira, Clara Ponsolles, Shafaq Sikandar, Juan Antonio Vera Torres, Kiwamu Yamaoka, Jing Zhao, Yuriko Komine, Tetsuo Yamamori, Nikolas Maniatis, Kostya I. Panov, Henry Houlden, Juan D. Ramirez, David L.H. Bennett, Letizia Marsili, Valeria Bachiocco, John N. Wood, James J. Cox
Software Mentions: 1
Published: almost 7 years ago

10.1042/BSR20191570

Bacterial association and comparison between lung and intestine in rats
Cited by: 8
Author(s): Tianhao Liu, Chenyang Zhang, Ahmad Ud Din, Ning Li, Qian Wang, Jing-Ze Yu, Zhenyuan Xu, Chenxi Li, Xiaomei Zhang, Jiali Yuan, Liguo Chen, Zhongshan Yang
Software Mentions: 1
Published: over 4 years ago

10.1155/2017/9610810

Impact of Chestnut and Quebracho Tannins on Rumen Microbiota of Bovines
Cited by: 45
Author(s): Juan María Díaz Carrasco, Claudio Cabral, Leandro M. Redondo, Natalia Daniela Pin Viso, D. Colombatto, Marisa Diana Farber, Mariano E. Fernández‐Miyakawa
Software Mentions: 1
Published: almost 8 years ago

10.3390/ani11072082

Oral Vaccination against Lawsoniaintracellularis Changes the Intestinal Microbiome in Weaned Piglets
Cited by: 7
Author(s): Robin B. Guevarra, Jae Hyoung Cho, Jin Ho Cho, Jun Hyung Lee, Hyeri Kim, Sheena Kim, Eun Sol Kim, Gi Beom Keum, Suphot Watthanaphansak, Min Ho Song
Software Mentions: 1
Published: over 3 years ago

10.3390/ani11020504

Dietary Glutamic Acid Modulates Immune Responses and Gut Health of Weaned Pigs
Cited by: 10
Author(s): Hyunjin Kyoung, Jeong Jae Lee, Jin Ho Cho, Jae Gol Choe, Ji-Hoon Kang, Hanbae Lee, Yanhong Liu, Young-Hoon Kim, Hyeun Bum Kim, Min Ho Song
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41598-017-05035-3

Prognostic cancer gene signatures share common regulatory motifs
Cited by: 22
Author(s): Ying Wang, Steve Goodison, Xiaoman Li, Haiyan Hu
Software Mentions: 1
Published: over 7 years ago

10.3390/nu12030827

Modelling the Impact of Chronic Cigarette Smoke Exposure in Obese Mice: Metabolic, Pulmonary, Intestinal, and Cardiac Issues
Cited by: 7
Author(s): Emilie Dubois‐Deruy, Gaëlle Rémy, Jeanne Alard, Gwenola Kervoaze, Maggy Chwastyniak, Morgane Baron, Delphine Beury, Léa Siegwald, Ségolène Caboche, David Hot, Philippe Gosset, Corinne Grangette, Florence Pinet, Isabelle Wolowczuk, Muriel Pichavant
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-017-06112-3

The rhizosphere microbiome of burned holm-oak: potential role of the genus Arthrobacter in the recovery of burned soils
Cited by: 56
Author(s): Antonio J. Fernández‐González, Pilar Martínez‐Hidalgo, José F. Cobo‐Díaz, Pablo J. Villadas, Eustoquio Martínez‐Molina, Nicolás Toro, Susannah G. Tringe, Manuel Fernández‐López
Software Mentions: 1
Published: over 7 years ago

10.3390/ani10091639

Exploring the Rumen and Cecum Microbial Community from Fetus to Adulthood in Goat
Cited by: 12
Author(s): Xian Zou, Guangbin Liu, Fanming Meng, Linjun Hong, Yaokun Li, Zhiquan Lian, Zijun Yang, Chenglong Luo, Dewu Liu
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-017-07420-4

Supplemental thymol and carvacrol increases ileum Lactobacillus population and reduces effect of necrotic enteritis caused by Clostridium perfringes in chickens
Cited by: 51
Author(s): Dafei Yin, Encun Du, Jianmin Yuan, Jinxin Gao, YouLi Wang, Samuel E. Aggrey, Yuming Guo
Software Mentions: 1
Published: over 7 years ago

10.3390/ijms17050649

Impact of Prematurity and Perinatal Antibiotics on the Developing Intestinal Microbiota: A Functional Inference Study
Cited by: 105
Author(s): Silvia Arboleya, Borja Sánchez, Gonzalo Solı́s, Nuria Fernández, Marta Suárez, Ana María Hernández-Barranco, Christian Milani, Abelardo Margollés, Clara G. de los Reyes‐Gavilán, Marco Ventura, Miguel Gueimonde
Software Mentions: 1
Published: over 8 years ago

10.3390/ijms19030672

Core Microbiome of Medicinal Plant Salvia miltiorrhiza Seed: A Rich Reservoir of Beneficial Microbes for Secondary Metabolism?
Cited by: 95
Author(s): Haimin Chen, Haihua Wu, Bin Yan, Hongguang Zhao, Fenghua Li, Haihua Zhang, Sheng Qing, Fei Miao, Zongsuo Liang
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-017-11215-y

A cross-sectional comparative study of gut bacterial community of Indian and Finnish children
Cited by: 32
Author(s): Shreyas V. Kumbhare, Himanshu Kumar, Somak Chowdhury, Dhiraj Dhotre, Akihito Endo, Jaana Mättö, Arthur C. Ouwehand, Samuli Rautava, Ruchi Joshi, Nitinkumar P. Patil, Ravindra H. Patil, Erika Isolauri, Ashish Bavdekar, Seppo Salminen, Yogesh S. Shouche
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-017-11826-5

Metagenomic insight into the microbial networks and metabolic mechanism in anaerobic digesters for food waste by incorporating activated carbon
Cited by: 40
Author(s): Jingxin Zhang, Liwei Mao, Le Zhang, Kai‐Chee Loh, Yanjun Dai, Yen Wah Tong
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-017-12481-6

Metagenomic characterization of the effect of feed additives on the gut microbiome and antibiotic resistome of feedlot cattle
Cited by: 94
Author(s): M. G. Thomas, M. J. Webb, Sudeep Ghimire, A. D. Blair, K. C. Olson, Gavin Fenske, Alex Thomas Fonder, Jane Christopher‐Hennings, D. W. Brake, Joy Scaria
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-017-14258-3

Investigation of foaming causes in three mesophilic food waste digesters: reactor performance and microbial analysis
Cited by: 39
Author(s): Qin He, Lei Li, Xiaofei Zhao, Qu Li, Di Wu, Xiangjun Peng
Software Mentions: 1
Published: about 7 years ago

10.3390/ijms19123827

The Human Microbiota and Obesity: A Literature Systematic Review of In Vivo Models and Technical Approaches
Cited by: 5
Author(s): Lucrecia Carrera-Quintanar, Daniel Ortuño-Sahagún, Noel N Franco-Arroyo, Juan Manuel Viveros–Paredes, Adelaida Sara Minia Zepeda-Morales, Rocío Ivette López-Roa
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-017-15510-6

Gastric microbiome of Indian patients with Helicobacter pylori infection, and their interaction networks
Cited by: 46
Author(s): Anubhav Das, Verima Pereira, Shruti Saxena, Tarini Shankar Ghosh, D. Anbumani, Satyabrata Bag, Bhabatosh Das, G. Balakrish Nair, Philip Abraham, Sharmila S. Mande
Software Mentions: 1
Published: about 7 years ago

10.1155/2014/708364

Characterization of Putativecis-Regulatory Elements in Genes Preferentially Expressed inArabidopsisMale Meiocytes
Cited by: 14
Author(s): Junhua Li, Jinhong Yuan, Mingjun Li
Software Mentions: 1
Published: almost 11 years ago

10.1038/s41598-017-18298-7

Characterizing the bacterial microbiota in different gastrointestinal tract segments of the Bactrian camel
Cited by: 42
Author(s): Jing He, Yang Li, Lê Thanh Hải, Ming Liang, Wanting Gao
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-018-20322-3

A 5-year field study showed no apparent effect of the Bt transgenic 741 poplar on the arthropod community and soil bacterial diversity
Cited by: 24
Author(s): Lihui Zuo, Ruifu Yang, Zhen Zhi-xian, Junxia Liu, Huang Lei, Minsheng Yang
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-018-20367-4

Whole metagenome sequencing reveals links between mosquito microbiota and insecticide resistance in malaria vectors
Cited by: 79
Author(s): Nsa Dada, Mili Sheth, Kelly A. Liebman, Jesús Pinto, Audrey Lenhart
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-018-20508-9

Interaction of genotype and diet on small intestine microbiota of Japanese quail fed a cholesterol enriched diet
Cited by: 14
Author(s): Shasha Li, Hein Min Tun, Fung Ping Leung, Darin C. Bennett, Hongfu Zhang, Kimberly M. Cheng
Software Mentions: 1
Published: almost 7 years ago

10.1155/2020/3765937

Prognostic Value of Complement Component 2 and Its Correlation with Immune Infiltrates in Hepatocellular Carcinoma
Cited by: 10
Author(s): Gang Ning, Yanlin Huang, Limin Zhen, Wenxiong Xu, Xuejun Li, Lina Wu, Ying Liu, Chan Xie, Liang Peng
Software Mentions: 1
Published: over 4 years ago

10.1016/j.aninu.2020.11.019

Age-associated changes in caecal microbiome and their apparent correlations with growth performances of layer pullets
Cited by: 7
Author(s): Yan Li Liu, Tao Yan, Zhouzheng Ren, Xiaojun Yang
Software Mentions: 1
Published: about 3 years ago

10.1038/s41598-018-21241-z

The effect of Clostridium butyricum on symptoms and fecal microbiota in diarrhea-dominant irritable bowel syndrome: a randomized, double-blind, placebo-controlled trial
Cited by: 61
Author(s): Yiyuan Sun, Ming Li, Yueyue Li, Lixiang Li, Wen-Zhe Zhai, Peng Wang, Xiaoxiao Yang, Xiang Gu, Lijin Song, Zhen Li, Xiuli Zuo
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-018-21657-7

Initial meconium microbiome in Chinese neonates delivered naturally or by cesarean section
Cited by: 55
Author(s): Yi Shi, Hongyu Guo, Jing Chen, Gang Sun, Rongrong Ren, Mingzhou Guo, Lihua Peng, Yunsheng Yang
Software Mentions: 1
Published: almost 7 years ago

10.3390/nu12103197

A High-Fat Diet Increases Gut Microbiota Biodiversity and Energy Expenditure Due to Nutrient Difference
Cited by: 129
Author(s): Botao Wang, Qingmin Kong, Xiu Li, Jianxin Zhao, Hao Zhang, Gang Wang
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-018-22994-3

Effects of green tea on miRNA and microbiome of oral epithelium
Cited by: 20
Author(s): Guy R. Adami, Christy Tangney, Jessica L. Tang, Yalu Zhou, Saba Ghaffari, Ankur Naqib, Saurabh Sinha, Stefan J. Green, Joel L. Schwartz
Software Mentions: 1
Published: over 6 years ago

10.1155/2020/8406846

Alteration of Intestinal Microbiota in 3-Deoxyglucosone-Induced Prediabetic Rats
Cited by: 17
Author(s): Jin Cai, Liang Zhou, Xiudao Song, Meiqi Yin, Guoqiang Liang, Heng Xu, Lurong Zhang, Guilin Jiang, Fei Huang
Software Mentions: 1
Published: about 4 years ago

10.1155/2015/780357

Cofunctional Subpathways Were Regulated by Transcription Factor with Common Motif, Common Family, or Common Tissue
Cited by: 0
Author(s): Fei Su, Desi Shang, Yanjun Xu, Feng Li, Haixiu Yang, Baoquan Liu, Shengyang Su, Lina Chen, Xia Li
Software Mentions: 1
Published: almost 10 years ago

10.1038/s41598-018-26509-y

Combining amplicon sequencing and metabolomics in cirrhotic patients highlights distinctive microbiota features involved in bacterial translocation, systemic inflammation and hepatic encephalopathy
Cited by: 56
Author(s): Valerio Iebba, Francesca Guerrieri, V. Di Gregorio, Massimo Levrero, Antonella Gagliardi, Floriana Santangelo, Anatoly P. Sobolev, Simone Circi, V. Giannelli, Luisa Mannina, Serena Schippa, Manuela Merli
Software Mentions: 1
Published: over 6 years ago

10.6026/97320630015490

Functional signature analysis of extreme Prakriti endo-phenotypes in gut microbiome of western Indian rural population
Cited by: 6
Author(s): Fauzul Mobeen, Vikas Sharma, Tulika Prakash
Software Mentions: 1
Published: over 5 years ago

10.1186/1752-0509-7-S3-S10

Identification of novel motif patterns to decipher the promoter architecture of co-expressed genes in Arabidopsis thaliana
Cited by: 5
Author(s): Yosvany López, Ashwini Patil, Kenta Nakai
Software Mentions: 1
Published: about 11 years ago

10.1038/s41598-018-27977-y

Towards a gene regulatory network shaping the fins of the Princess cichlid
Cited by: 19
Author(s): Ehsan Pashay Ahi, Kristina M. Sefc
Software Mentions: 1
Published: over 6 years ago

10.3390/nu10111641

First Insights into the Gut Microbiota of Mexican Patients with Celiac Disease and Non-Celiac Gluten Sensitivity
Cited by: 38
Author(s): José F. García-Mazcorro, Xaira Rivera-Gutiérrez, Orestes Cobos-Quevedo, Peter Grube-Pagola, Arturo Meixueiro-Daza, Karina Guadalupe Hernández-Flores, Francisco Javier Cabrera-Jorge, Héctor Vivanco-Cid, Scot E. Dowd, José María Remes-Troche
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-018-29821-9

Fouling Development in A/O-MBR under Low Organic Loading Condition and Identification of Key Bacteria for Biofilm Formations
Cited by: 21
Author(s): Yuya Takimoto, Masashi Hatamoto, Takaya Ishida, Takahiro Watari, Takashi Yamaguchi
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-32886-1

Exposure to heat-stress environment affects the physiology, circulation levels of cytokines, and microbiome in dairy cows
Cited by: 76
Author(s): Siyu Chen, J. Wang, Dandan Peng, Li Gan, Jian Chen, Xianhong Gu
Software Mentions: 1
Published: about 6 years ago

10.1186/1752-0509-7-S2-S14

SPIC: A novel similarity metric for comparing transcription factor binding site motifs based on information contents
Cited by: 13
Author(s): Shaoqiang Zhang, Xin Zhou, Chuanbin Du, Zhengchang Su
Software Mentions: 1
Published: almost 12 years ago

10.1038/s41598-018-35473-6

Variations in oral microbiome profiles in rheumatoid arthritis and osteoarthritis with potential biomarkers for arthritis screening
Cited by: 60
Author(s): Bin Chen, Yan Zhao, Shufeng Li, Lanxiu Yang, Haiying Wang, Tao Wang, Bin Shi, Zhongtao Gai, Xueyuan Heng, Chunyu Zhang, Junjie Yang, Lei Zhang
Software Mentions: 1
Published: about 6 years ago

Projects: pypi: STAMP

Papers Mentioning STAMP 1,190