Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: SIPSim

https://packages.ecosyste.ms/registries/pypi.org/packages/SIPSim

Simulate High Resolution Stable Isotope Probing Datasets
1 version
Latest release: over 6 years ago
13 downloads last month

Papers Mentioning SIPSim 4

SIPSim: A Modeling Toolkit to Predict Accuracy and Aid Design of DNA-SIP Experiments
Cited by: 37
Author(s): Nicholas D. Youngblut, Samuel E. Barnett, Daniel H. Buckley
Software Mentions: 8
Published: over 6 years ago

10.1371/journal.pone.0189616

HTSSIP: An R package for analysis of high throughput sequencing data from nucleic acid stable isotope probing (SIP) experiments
Cited by: 37
Author(s): Nicholas D. Youngblut, Samuel E. Barnett, Daniel H. Buckley
Software Mentions: 6
Published: over 6 years ago

10.1038/s41396-019-0584-8

Evidence for phylogenetically and catabolically diverse active diazotrophs in deep-sea sediment
Cited by: 36
Author(s): Bennett J. Kapili, Samuel E. Barnett, Daniel H. Buckley, Anne E. Dekas
Software Mentions: 5
Published: over 4 years ago

10.1186/s12859-020-3372-6

Simulating metagenomic stable isotope probing datasets with MetaSIPSim
Cited by: 15
Author(s): Samuel E. Barnett, Daniel H. Buckley
Software Mentions: 2
Published: over 4 years ago