Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0189616

https://doi.org/10.1371/journal.pone.0189616

HTSSIP: An R package for analysis of high throughput sequencing data from nucleic acid stable isotope probing (SIP) experiments

Cited by: 37
Author(s): Nicholas D. Youngblut, Samuel E. Barnett, Daniel H. Buckley
Published: almost 7 years ago

Software Mentions 6

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: coenocliner
Coenocline Simulation
Papers that mentioned: 2
cran: doParallel
Foreach Parallel Adaptor for the 'parallel' Package
Papers that mentioned: 90
cran: doSNOW
Foreach Parallel Adaptor for the 'snow' Package
Papers that mentioned: 19
cran: HTSSIP
High Throughput Sequencing of Stable Isotope Probing Data Analysis
Papers that mentioned: 4
pypi: SIPSim
Simulate High Resolution Stable Isotope Probing Datasets
Papers that mentioned: 4