Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: PIMS

https://packages.ecosyste.ms/registries/pypi.org/packages/PIMS

Python Image Sequence
21 versions
Latest release: about 1 year ago
18 dependent packages
109,445 downloads last month

Papers Mentioning PIMS 25

10.1186/1471-2164-13-462
NG6: Integrated next generation sequencing storage and processing environment
Cited by: 54
Author(s): Jérôme Mariette, Frédéric Escudié, Nicolas Allias, Gérald Salin, Céline Noirot, Sylvain Thomas, Christophe Klopp
Software Mentions: 10
Published: almost 13 years ago
10.1093/gigascience/giz076
Open Humans: A platform for participant-centered research and personal data exploration
Cited by: 39
Author(s): Bastian Greshake Tzovaras, Misha Angrist, Kevin J. Arvai, Mairi Dulaney, Vero Estrada-Galiñanes, Beau Gunderson, T. Head, Dana Lewis, Oded Nov, Orit Shaer, Athina Tzovara, Jason Bobe, Mad Price Ball
Software Mentions: 4
Published: over 5 years ago
10.1186/1756-0500-4-48
PIMS sequencing extension: a laboratory information management system for DNA sequencing facilities
Cited by: 7
Author(s): Peter V Troshin, Vincent L. G. Postis, Denise Ashworth, Stephen A. Baldwin, Michael J. McPherson, Geoffrey J. Barton
Software Mentions: 3
Published: over 13 years ago
10.3390/molecules23123338
Temporal Filtering to Improve Single Molecule Identification in High Background Samples
Cited by: 5
Author(s): Alexander W.A.F. Reismann, Lea Atanasova, Lukas Schrangl, Susanne Zeilinger, Gerhard J. Schütz
Software Mentions: 2
Published: almost 6 years ago
10.1107/S0907444913013280
Squeezing the most from every crystal: the fine details of data collection
Cited by: 15
Author(s): T. Krojer, Ashley C.W. Pike, Frank von Delft
Software Mentions: 2
Published: over 11 years ago
10.1186/1756-0500-7-546
A program to identify prognostic and predictive gene signatures
Cited by: 2
Author(s): Sam D Chorlton, Robin Hallett, John A. Hassell
Software Mentions: 1
Published: over 10 years ago
10.1186/s12934-019-1101-5
Exploring small-scale chemostats to scale up microbial processes: 3-hydroxypropionic acid production in S. cerevisiae
Cited by: 14
Author(s): Alicia Viktoria Lis, Konstantin Schneider, Jost Weber, Jay D. Keasling, Michael K. Jensen, Tobias Klein
Software Mentions: 1
Published: over 5 years ago
10.1186/1475-2859-12-94
A dynamic method for the investigation of induced state metabolic capacities as a function of temperature
Cited by: 14
Author(s): Patrick Sagmeister, Timo Langemann, Patrick Wechselberger, Andrea Meitz, Christoph Herwig
Software Mentions: 1
Published: about 11 years ago
10.1186/s12934-017-0768-8
A novel bi-directional promoter system allows tunable recombinant protein production in Pichia pastoris
Cited by: 16
Author(s): Vignesh Rajamanickam, Karl Metzger, Christian Schmid, Oliver Spadiut
Software Mentions: 1
Published: about 7 years ago
10.1186/s13741-019-0125-z
Large volume infusions of hydroxyethyl starch during cardiothoracic surgery may be associated with postoperative kidney injury: propensity-matched analysis
Cited by: 5
Author(s): Wataru Matsunaga, Masamitsu Sanui, Yusuke Sasabuchi, Yasuma Kobayashi, Asuka Kitajima, Fumitaka Yanase, Yutaka Takisawa, Alan Kawarai Lefor
Software Mentions: 1
Published: about 5 years ago
10.1371/journal.pone.0173466
Prevalence, risk factors and health outcomes associated with polypharmacy among urban community-dwelling older adults in multi-ethnic Malaysia
Cited by: 87
Author(s): Li Min Lim, Megan McStea, Wen Wei Chung, Nuruljannah Nor Azmi, Siti Azdiah Abdul Aziz, Syireen Alwi, Adeeba Kamarulzaman, Shahrul Bahyah Kamaruzzaman, Siew Siang Chua, Reena Rajasuriar
Software Mentions: 1
Published: over 7 years ago
10.1093/crocol/otaa037
Functional Molecular Network Analysis Enables Prediction of Response to Vedolizumab Therapy in Anti-TNF Refractory IBD Patients
Cited by: 4
Author(s): Matthias Breidert, Pierre Eftekhari, François Louis, Claudia Rotoiu, Timo Räth, Markus F. Neurath, Raja Atreya
Software Mentions: 1
Published: over 4 years ago
10.7759/cureus.9515
COVID-19 and Hyperinflammatory Syndrome in Children: Kawasaki Disease with Macrophage Activation Syndrome in Disguise?
Cited by: 10
Author(s): Rohit S. Loomba, Enrique G. Villarreal, Saúl Flores
Software Mentions: 1
Published: over 4 years ago
10.3332/ecancer.2014.398
ecancermedicalscience
Cited by: 4
Author(s): Fatima Schera, Gabriele Weiler, Elias Neri, Stephan Kiefer, Norbert Graf
Software Mentions: 1
Published: almost 8 years ago
10.1080/22221751.2020.1846462
COVID-19 in children across three Asian cosmopolitan regions
Cited by: 15
Author(s): Gilbert T. Chua, Xiaoli Xiong, Eun Hwa Choi, Mi Seon Han, Sung Hee Chang, Byoung Lo Jin, Eun Joo Lee, Baek-Nam Kim, Min Kyoung Kim, Kihyun Doo, Ju Hee Seo, Yae Jean Kim, Yeo Jin Kim, Ji Young Park, Sun Bok Suh, Hyunju Lee, Eun Young Cho, Dong Hyun Kim, Jong Min Kim, Hye Young Kim, Su Eun Park, Joon Kee Lee, Dae Sun Jo, Seung Man Cho, Jae Hong Choi, Kyo Jin Jo, Young June Choe, Ki Hwan Kim, Shuiqing Chi, Shao tao Tang, Huan Qin, Li Zhou, Peng Chen, Joshua Sung Chih Wong, Kate Ching Ching Chan, Felix Yat Sun Yau, Shu Yan Lam, Calvin Chit Kwong Chow, Tak Wai Wong, Victor C.M. Chan, Grace Wing-kit Poon, Chun Bong Chow, Wilfred H. S. Wong, Yu Lung Lau, Godfrey Chi Fung Chan, Celine S L Chui, Xue Li, Marco Hok Kung Ho, Ian C K Wong, Paul Kwong Hang Tam, Kelvin Kai‐Wang To, Jong Hyun Kim, Patrick Ip, Mike Yat Wah Kwan
Software Mentions: 1
Published: almost 5 years ago
10.3389/fbioe.2020.573607
Repetitive Fed-Batch: A Promising Process Mode for Biomanufacturing With E. coli
Cited by: 7
Author(s): Julian Kopp, Stefan Kittler, Christoph Slouka, Christoph Herwig, Oliver Spadiut, David Johannes Wurm
Software Mentions: 1
Published: about 4 years ago
10.3389/fmed.2020.00517
Personalizing Treatment in IBD: Hype or Reality in 2020? Can We Predict Response to Anti-TNF?
Cited by: 61
Author(s): Raja Atreya, Markus F. Neurath, Britta Siegmund
Software Mentions: 1
Published: about 4 years ago
10.3389/fphar.2019.00473
A Shift From Logistic Software to Service Model: A Case Study of New Service-Driven-Software for Management of Emergency Supplies During Disasters and Emergency Conditions by WHO
Cited by: 8
Author(s): Huma Rasheed, Muhammad Usman, Waqas Ahmed, Muhammad Haroon Bacha, Asim Zafar, Khalid Saeed Bukhari
Software Mentions: 1
Published: over 5 years ago
10.3389/fpls.2013.00049
Oligogalacturonides: plant damage-associated molecular patterns and regulators of growth and development
Cited by: 358
Author(s): Simone Ferrari, Daniel V. Savatin, Francesca Sicilia, Giovanna Gramegna, Felice Cervone, Giulia De Lorenzo
Software Mentions: 1
Published: almost 12 years ago
10.3390/s19040980
Multi-Objective Optimization Based Multi-Bernoulli Sensor Selection for Multi-Target Tracking
Cited by: 13
Author(s): Yun Zhu, Jun Wang, Shuang Liang
Software Mentions: 1
Published: over 5 years ago
10.3390/s19173790
Recent Advances in Stochastic Sensor Control for Multi-Object Tracking
Cited by: 8
Author(s): Sabita Panicker, Amirali Khodadadian Gostar, Alireza Bab–Hadiashar, Reza Hoseinnezhad
Software Mentions: 1
Published: about 5 years ago
10.1007/s00216-020-02421-1
Current and future requirements to industrial analytical infrastructure—part 2: smart sensors
Cited by: 50
Author(s): Tobias Eifert, Kristina Eisen, Michael Maiwald, Christoph Herwig
Software Mentions: 1
Published: almost 5 years ago
10.1186/1471-2164-12-S4-S13
A rigorous approach to facilitate and guarantee the correctness of the genetic testing management in human genome information systems
Cited by: 2
Author(s): Luciano Vieira de Araújo, Simon Malkowski, Kelly Rosa Braghetto, Maria Rita Passos‐Bueno, Mayana Zatz, Calton Pu, João Eduardo Ferreira
Software Mentions: 1
Published: almost 14 years ago
10.1186/1471-2393-13-145
Wāhine hauora: linking local hospital and national health information datasets to explore maternal risk factors and obstetric outcomes of New Zealand Māori and non-Māori women in relation to infant respiratory admissions and timely immunisations
Cited by: 9
Author(s): Sara Filoche, Susan Garrett, James Stanley, Sally B. Rose, Bridget Robson, C Raina Elley, Beverley Lawton
Software Mentions: 1
Published: over 11 years ago
10.1186/s12888-017-1366-3
Risk factors for dementia in the ninth decade of life and beyond: a study of the Lothian birth cohort 1921
Cited by: 21
Author(s): Ruth Sibbett, Tom C. Russ, Ian J. Deary, John M. Starr
Software Mentions: 1
Published: over 7 years ago