Projects: pypi: PACE

https://packages.ecosyste.ms/registries/pypi.org/packages/PACE

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Latest release: over 10 years ago
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Science Score: 90/100
Starting Score: 100 points
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    3 scientific terms found in README
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Very Likely Science (90)

Papers Mentioning PACE 13,779

10.1371/journal.pgen.1009195
Aberrant regulation of a poison exon caused by a non-coding variant in a mouse model of Scn1a-associated epileptic encephalopathy
Cited by: 13
Author(s): Yuliya Voskobiynyk, Gopal Battu, Stephanie A. Felker, J. Nicholas Cochran, M. Newton, Laura J. Lambert, Robert A. Kesterson, R Myers, Gregory M. Cooper, Erik D. Roberson, Gregory S. Barsh
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0242939
DamID identifies targets of CEH-60/PBX that are associated with neuron development and muscle structure in Caenorhabditis elegans
Cited by: 5
Author(s): Pieter Van de Walle, Celia Muñoz-Jiménez, Peter Askjaer, Liliane Schoofs, Liesbet Temmerman
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0250062
Vulnerability to recurrent episodes of acute decompensation/acute-on-chronic liver failure characterizes those triggered by indeterminate precipitants in patients with liver cirrhosis
Cited by: 4
Author(s): Hitomi Hoshi, Po Sung Chu, Aya Yoshida, Nobuhito Taniki, Rei Morikawa, Karin Yamataka, Fumie Noguchi, Ryosuke Kasuga, Takaya Tabuchi, Hirotoshi Ebinuma, Hidetsugu Saito, Takanori Kanai, Nobuhiro Nakamoto
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pcbi.1008033
Facilitating the propagation of spiking activity in feedforward networks by including feedback
Cited by: 17
Author(s): Hedyeh Rezaei, Ad Aertsen, Arvind Kumar, Alireza Valizadeh
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0252119
Abnormal center of mass feedback responses during balance: A potential biomarker of falls in Parkinson’s disease
Cited by: 18
Author(s): J. Lucas McKay, Kimberly C. Lang, Sistania M. Bong, Madeleine E. Hackney, Stewart A. Factor, Lena H. Ting
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0250939
Uveal melanoma: Long-term survival
Cited by: 12
Author(s): Tomas Radivoyevitch, Emily C. Zabor, Arun D. Singh
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0226312
Significance of skull osteoporosis to the development of peritumoral brain edema after LINAC-based radiation treatment in patients with intracranial meningioma
Cited by: 2
Author(s): Ryang Hun Lee, Jae Min Kim, Jin Hwan Cheong, Je Il Ryu, Young Soo Kim, Myung Hoon Han
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0256501
Temporal and regional trends of antibiotic use in long-term aged care facilities across 39 countries, 1985-2019: Systematic review and meta-analysis
Cited by: 10
Author(s): Magdalena Z. Raban, Peter Gates, Claudia Gasparini, Johanna I. Westbrook
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0233285
Investigations of the mechanisms of interactions between four non-conventional species with Saccharomyces cerevisiae in oenological conditions
Cited by: 14
Author(s): Olivier Harlé, Judith Legrand, Catherine Tesnière, Martine Pradal, Jean-Roch Mouret, Thibault Nidelet
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0244061
Health care expenditure in the last five years of life is driven by morbidity, not age: A national study of spending trajectories in Danish decedents over age 65
Cited by: 14
Author(s): Anne Vinkel Hansen, Laust Hvas Mortensen, Stella Trompet, Rudi G. J. Westendorp
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pcbi.1009244
Performance and scaling behavior of bioinformatic applications in virtualization environments to create awareness for the efficient use of compute resources
Cited by: 6
Author(s): Maximilian Hanussek, Felix Bartusch, Jens Krüger
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0240583
Pre-lacteal feeding practices and associated factors among mothers of children aged less than 12 months in Jinka Town, South Ethiopia, 2018/19
Cited by: 12
Author(s): Muluken Bekele Sorrie, Elias Amaje, Feleke Gebremeskel
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pmed.1003029
Digitally enabled aged care and neurological rehabilitation to enhance outcomes with Activity and MObility UsiNg Technology (AMOUNT) in Australia: A randomised controlled trial
Cited by: 22
Author(s): Leanne Hassett, Maayken van den Berg, Richard I. Lindley, Maria Crotty, Annie McCluskey, Hidde P. van der Ploeg, Susan L. Smith, Karl Schurr, Kirsten Howard, Maree L. Hackett, Maggie Killington, Bert Bongers, Leanne Togher, Daniel Treacy, Simone Dorsch, Siobhan Wong, Katharine Scrivener, Sakina Chagpar, Heather Weber, Marina B. Pinheiro, Stéphane Héritier, Catherine Sherrington
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pmed.1003337
The prevalence of mental illness in refugees and asylum seekers: A systematic review and meta-analysis
Cited by: 270
Author(s): Rebecca Blackmore, Jacqueline Boyle, Mina Fazel, Sanjeeva Ranasinha, Kylie Megan Gray, Grace Fitzgerald, Marie Misso, Melanie Gibson-Helm
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pmed.1003220
Changes in the amount of nutrient of packaged foods and beverages after the initial implementation of the Chilean Law of Food Labelling and Advertising: A nonexperimental prospective study
Cited by: 104
Author(s): Marcela Reyes, Lindsey Smith Taillie, Barry M. Popkin, Rebecca Kanter, Stefanie Vandevijvere, Camila Corvalán
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0226049
Loss of family with sequence similarity 13, member A exacerbates pulmonary hypertension through accelerating endothelial-to-mesenchymal transition
Cited by: 10
Author(s): Pranindya Rinastiti, Koji Ikeda, Elda Putri Rahardini, Kazuya Miyagawa, Naoki Tamada, Yuko Kuribayashi, Ken‐ichi Hirata, Noriaki Emoto
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pcbi.1007918
Classifying sex and strain from mouse ultrasonic vocalizations using deep learning
Cited by: 32
Author(s): Aleksandr Ivanenko, Paul V. Watkins, Marcel A. J. van Gerven, Kurt Hammerschmidt, Bernhard Englitz
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0221374
The association of D-dimer with clinicopathological features of breast cancer and its usefulness in differential diagnosis: A systematic review and meta-analysis
Cited by: 12
Author(s): Yan Lu, LongYi Zhang, QiaoHong Zhang, Yongjun Zhang, Debao Chen, Jianjie Lou, Jiaming Jiang, ChaoXiang Ren
Software Mentions: 2
Published: about 7 years ago
10.1371/journal.pone.0242770
Comparison of the human microbiome in adults and children with chronic rhinosinusitis
Cited by: 4
Author(s): Il Ho Park, Joong Seob Lee, Joo Hoo Park, Suk Ho Kang, Seong Ahn Hong, Il Seok Park, Joo Heung Yoon
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pcbi.1007633
The impact of news exposure on collective attention in the United States during the 2016 Zika epidemic
Cited by: 23
Author(s): Michele Tizzoni, André Panisson, Daniela Paolotti, Ciro Cattuto
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pcbi.1007848
Mechanistic model of hormonal contraception
Cited by: 4
Author(s): Andrew A. Wright, Ghassan N. Fayad, James F. Selgrade, Mette S. Olufsen
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0252804
Differences in the genome, methylome, and transcriptome do not differentiate isolates of Streptococcus equi subsp. equi from horses with acute clinical signs from isolates of inapparent carriers
Cited by: 4
Author(s): Ellen Ruth A. Morris, Ashley G. Boyle, Miia Riihimäki, Anna Aspán, Eman Anis, Andrew Hillhouse, Ivan Ivanov, Angela I. Bordin, John Pringle, Noah D. Cohen
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pmed.1003481
Mindfulness-based programmes for mental health promotion in adults in nonclinical settings: A systematic review and meta-analysis of randomised controlled trials
Cited by: 100
Author(s): Julieta Galante, Claire Friedrich, Anna F Dawson, Marta Modrego‐Alarcón, Pia Gebbing, Irene Delgado-Suárez, Radhika Gupta, Lydia Dean, Tim Dalgleish, Ian R. White, Peter B. Jones
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0225385
The Cinderella Complex: Word embeddings reveal gender stereotypes in movies and books
Cited by: 10
Author(s): Huimin Xu, Zhang Zhang, Lingfei Wu, Chengjun Wang
Software Mentions: 2
Published: almost 7 years ago
10.1371/journal.pcbi.1009126
Optimizing testing for COVID-19 in India
Cited by: 12
Author(s): Philip Cherian, Sandeep Krishna, Gautam I. Menon
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0242496
Percutaneous Chevron/Akin (PECA) versus open scarf/Akin (SA) osteotomy treatment for hallux valgus: A systematic review and meta-analysis
Cited by: 11
Author(s): Gabriel Ferraz Ferreira, Vinícius Quadros Borges, Leonardo Moraes, Kelly Cristina Stéfani
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0250089
Reliability of left atrial strain reference values: A 3D echocardiographic study
Cited by: 9
Author(s): Yosuke Nabeshima, Tetsuji Kitano, Masaaki Takeuchi
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pcbi.1007487
Atypical structural tendencies among low-complexity domains in the Protein Data Bank proteome
Cited by: 24
Author(s): Sean M. Cascarina, Mikaela R. Elder, Eric D. Ross
Software Mentions: 2
Published: almost 7 years ago
10.1371/journal.pone.0243096
Enhanced recovery programmes versus conventional care in bariatric surgery: A systematic literature review and meta-analysis
Cited by: 4
Author(s): Khalid Al‐Rubeaan, C. Tong, H. Taylor, Karl Miller, Thao Nguyen Phan Thanh, C. Ridley, Sara Steeves, W. Marsh
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0234232
Influence of perceived threat of Covid-19 and HEXACO personality traits on toilet paper stockpiling
Cited by: 107
Author(s): Lisa Garbe, Richard Rau, Theo Toppe
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pcbi.1008653
TranSynergy: Mechanism-driven interpretable deep neural network for the synergistic prediction and pathway deconvolution of drug combinations
Cited by: 66
Author(s): Liu Qiao, Lei Xie
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0225915
Cerebrovascular reactivity assessment with O2-CO2 exchange ratio under brief breath hold challenge
Cited by: 15
Author(s): Suk-Tak Chan, Karleyton C. Evans, Tian-yue Song, Juliette Selb, André van der Kouwe, Bruce R. Rosen, Yongping Zheng, Andrew Ahn, Kenneth K. Kwong
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0244214
Evaluation of community based surveillance in the Rohingya refugee camps in Cox’s Bazar, Bangladesh, 2019
Cited by: 2
Author(s): Elburg van Boetzelaer, Samiur Chowdhury, Berhe Etsay, A. S. G. Faruque, Annick Lenglet, Anna Kuehne, Isidro Carrion-Martin, Patrick Keating, Martins Dada, Jorieke Vyncke, Donald Sonne Kazungu, Maria Verdecchia
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0228362
Jmjd1c is dispensable for healthy adult hematopoiesis and Jak2V617F-driven myeloproliferative disease initiation in mice
Cited by: 4
Author(s): Hans Felix Staehle, Johannes Heinemann, Albert Gruender, Anne Marie Omlor, Heike L. Pahl, Jonas S. Jutzi
Software Mentions: 2
Published: almost 7 years ago
10.1371/journal.pcbi.1009375
Reconstructing contact network structure and cross-immunity patterns from multiple infection histories
Cited by: 0
Author(s): Christian Selinger, Samuel Alizon
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0228463
Induction of systemic immunity through nasal-associated lymphoid tissue (NALT) of mice intranasally immunized with Brucella abortus malate dehydrogenase-loaded chitosan nanoparticles
Cited by: 12
Author(s): Soojin Shim, Sang Hee Soh, Young Jae Im, Cheol‐Hee Ahn, Hong-Tae Park, Woo Bin Park, Suji Kim, Han Sang Yoo
Software Mentions: 2
Published: almost 7 years ago
10.1371/journal.pone.0247653
Cervical transcutaneous vagal neuromodulation in chronic pancreatitis patients with chronic pain: A randomised sham controlled clinical trial
Cited by: 9
Author(s): Janusiya Anajan Muthulingam, Søren Schou Olesen, Tore Hansen, Christina Brock, Asbjørn Mohr Drewes, Jens Brøndum Frøkjær
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0232991
The role of the C2A domain of synaptotagmin 1 in asynchronous neurotransmitter release
Cited by: 5
Author(s): Mallory Shields, Matthew T. Bowers, Hannah L. Kramer, McKenzie M. Fulcer, Lara C. Perinet, Marissa J. Metz, Noreen E. Reist
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0228760
SMART-Q: An Integrative Pipeline Quantifying Cell Type-Specific RNA Transcription
Cited by: 3
Author(s): Xiaoyu Yang, Seth Bergenholtz, Lenka Maliskova, Mark-Phillip Pebworth, Arnold R. Kriegstein, Yun Li, Yin Shen
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0235179
Examining the effects of transcranial direct current stimulation on human episodic memory with machine learning
Cited by: 7
Author(s): Aleksandra Petrovskaya, Bogdan Kirillov, Anastasiya Asmolova, Giulia Galli, Matteo Feurra, Angela Medvedeva
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pcbi.1009415
Rats spontaneously perceive global motion direction of drifting plaids
Cited by: 2
Author(s): Giulio Matteucci, Benedetta Zattera, Rosilari Bellacosa Marotti, Davide Zoccolan
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0239273
Genomic analysis of cardiac surgery-associated Mycobacterium chimaera infections in Italy
Cited by: 6
Author(s): Arash Ghodousi, Emanuele Borroni, Marta Peracchi, Giorgio Palù, Loredana Fallico, Mario Rassu, Vinicio Manfrin, Paola Mantegani, Vincenzina Monzillo, Riccardo Manganelli, Enrico Tortoli, Daniela María Cirillo
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pcbi.1008795
Extracting representations of cognition across neuroimaging studies improves brain decoding
Cited by: 11
Author(s): Arthur Mensch, Julien Mairal, Bertrand Thirion, Gaël Varoquaux
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0233638
Relationship between glass transition temperature, and desiccation and heat tolerance in Salmonella enterica
Cited by: 5
Author(s): Kyeongmin Lee, Masaki Shoda, Kiyoshi Kawai, Shigenobu Koseki
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pcbi.1007968
Non-canonical RNA-DNA differences and other human genomic features are enriched within very short tandem repeats
Cited by: 4
Author(s): Hui Yu, Shilin Zhao, Scott A. Ness, Huining Kang, Quanhu Sheng, David C. Samuels, Olufunmilola Oyebamiji, Zhao Yan, Yan Guo
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pcbi.1008942
The landscape of metabolic pathway dependencies in cancer cell lines
Cited by: 7
Author(s): James H. Joly, Brandon T.L. Chew, Nicholas A. Graham
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0235068
Keeping the power on to home medical devices
Cited by: 5
Author(s): Richard Bean, Stephen Snow, Mashhuda Glencross, Stephen Viller, Neil Horrocks
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0253381
Infection rate models for COVID-19: Model risk and public health news sentiment exposure adjustments
Cited by: 7
Author(s): Ioannis Chalkiadakis, Honglin Yan, Gareth W. Peters, Pavel V. Shevchenko
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pmed.1003497
Association of socioeconomic deprivation with asthma care, outcomes, and deaths in Wales: A 5-year national linked primary and secondary care cohort study
Cited by: 10
Author(s): Mohammad A Alsallakh, Sarah Rodgers, Ronan A Lyons, Aziz Sheikh, Gwyn Davies
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0238979
Go big or go home: A model-based assessment of general strategies to slow the spread of forest pests via infested firewood
Cited by: 6
Author(s): P Jentsch, Chris T. Bauch, Denys Yemshanov, Madhur Anand
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pone.0244519
Nobody ever questions—Polypharmacy in care homes: A mixed methods evaluation of a multidisciplinary medicines optimisation initiative
Cited by: 4
Author(s): Sue Jordan, Hayley Prout, Neil Carter, John Dicomidis, Joanne Hayes, Jeff Round, Andrew Carson‐Stevens
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pcbi.1007934
Microbial communities display alternative stable states in a fluctuating environment
Cited by: 19
Author(s): Clare I. Abreu, Vilhelm L. Andersen Woltz, Jonathan Friedman, Jeff Gore
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0246249
Creatures of the state? Metropolitan counties compensated for state inaction in initial U.S. response to COVID-19 pandemic
Cited by: 9
Author(s): Christof Brandtner, Luís M. A. Bettencourt, Marc G. Berman, Andrew J. Stier
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pmed.1003735
Accuracy of novel antigen rapid diagnostics for SARS-CoV-2: A living systematic review and meta-analysis
Cited by: 202
Author(s): Lukas E. Brümmer, Stephan Katzenschlager, Mary Gaeddert, Christian Erdmann, Stephani Schmitz, Marc Bota, Maurizio Grilli, Jan Larmann, Markus Weigand, Nira R. Pollock, Aurélien Macé, Sergio Carmona, Stefano Ongarello, Jilian A. Sacks, Claudia M. Denkinger
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pcbi.1008525
A novel stochastic simulation approach enables exploration of mechanisms for regulating polarity site movement
Cited by: 7
Author(s): Samuel A. Ramirez, Michael Pablo, Sean Burk, Daniel J. Lew, Timothy C. Elston
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pmed.1003347
Intake of dietary fats and fatty acids and the incidence of type 2 diabetes: A systematic review and dose-response meta-analysis of prospective observational studies
Cited by: 52
Author(s): Manuela Neuenschwander, Janett Barbaresko, Claudia R. Pischke, Nadine Iser, Julia Beckhaus, Lukas Schwingshackl, Sabrina Schlesinger
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pcbi.1008060
REDCRAFT: A computational platform using residual dipolar coupling NMR data for determining structures of perdeuterated proteins in solution
Cited by: 8
Author(s): Casey A. Cole, Nourhan S. Daigham, Gaohua Liu, Gaetano T. Montelione, Homayoun Valafar
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0218360
Candida utilis yeast as a functional protein source for Atlantic salmon (Salmo salar L.): Local intestinal tissue and plasma proteome responses
Cited by: 14
Author(s): Felipe Eduardo Reveco-Urzua, Mette Hofossæter, Mallikarjuna Rao Kovi, Liv Torunn Mydland, Ragnhild Ånestad, Randi Sørby, Charles McL. Press, Leidy Lagos, Margareth Øverland
Software Mentions: 2
Published: almost 7 years ago
10.1371/journal.pcbi.1008053
Estimation of neuron parameters from imperfect observations
Cited by: 2
Author(s): Joseph D. Taylor, Samuel Winnall, Alain Nogaret
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pcbi.1008785
SARS-CoV-2 viral dynamics in non-human primates
Cited by: 41
Author(s): Antônio José Gonçalves, Pauline Maisonnasse, Flora Donati, Mélanie Albert, Sylvie Behillil, Vanessa Contreras, Thibaut Naninck, Romain Marlin, Caroline Solas, Andrés Pizzorno, Julien Lemaître, Nidhal Kahlaoui, Benjamin Terrier, Raphaël Ho Tsong Fang, Vincent Enouf, Nathalie Dereuddre‐Bosquet, Angela Brisebarre, Franck Touret, Catherine Chapon, Bruno Hoën, Bruno Lina, Manuel Rosa‐Calatrava, Xavier de Lamballerie, France Mentré, Roger Le Grand, Sylvie van der Werf, Jérémie Guedj
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0256352
Clinical validation of an open-access SARS-COV-2 antigen detection lateral flow assay, compared to commercially available assays
Cited by: 12
Author(s): Christine Bachman, Benjamin D. Grant, Caitlin Anderson, Luis F. Alonzo, Spencer Garing, Sam A. Byrnes, Roberto Rivera, Stephen Burkot, Alexey Ball, James W. Stafford, Wenbo Wang, Dipayan Banik, Matthew D. Keller, David M. Cate, Kevin P. Nichols, Bernhard H. Weigl, Puneet Dewan
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pcbi.1007661
An electrodiffusive, ion conserving Pinsky-Rinzel model with homeostatic mechanisms
Cited by: 21
Author(s): Marte J. Sætra, Gaute T. Einevoll, Geir Halnes
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pcbi.1008080
Flexible neural connectivity under constraints on total connection strength
Cited by: 1
Author(s): Gabriel Koch Ocker, Michael A. Buice
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0242170
The cost-effectiveness of a program to reduce intrapartum and neonatal mortality in a referral hospital in Ghana
Cited by: 1
Author(s): Stephanie Bogdewic, Rohit Ramaswamy, Medge D. Owen, Emmanuel Srofenyoh, Sebnem Ucer, Medge D. Owen
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pcbi.1009328
Targeted modulation of protein liquid–liquid phase separation by evolution of amino-acid sequence
Cited by: 16
Author(s): Simon M. Lichtinger, Adiran Garaizar, Rosana Collepardo-Guevara, Aleks Reinhardt
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0257356
Gene signatures associated with barrier dysfunction and infection in oral lichen planus identified by analysis of transcriptomic data
Cited by: 5
Author(s): Phuc Thi-Duy Vo, Sun Shim Choi, Hae Ryoun Park, Ahreum Lee, Sung-Hee Jeong, Youngok Choi
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0255617
A systematic review and meta-analysis on international studies of prevalence, mortality and survival due to coal mine dust lung disease
Cited by: 12
Author(s): Cynthia Lu, Paramita Dasgupta, Jessica K. Cameron, Lin Fritschi, Peter D. Baade
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pcbi.1007877
Accelerating prediction of chemical shift of protein structures on GPUs: Using OpenACC
Cited by: 3
Author(s): Eric Wright, Mauricio Ferrato, Alexander J. Bryer, Robert Schleicher, Juan R. Perilla, Sunita Chandrasekaran
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pcbi.1008633
Testing, tracing and isolation in compartmental models
Cited by: 31
Author(s): Simone Sturniolo, William Waites, Tim Colbourn, David Manheim, Jasmina Panovska‐Griffiths
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0228105
Machine learning for syndromic surveillance using veterinary necropsy reports
Cited by: 13
Author(s): Nathan Bollig, Lorelei L. Clarke, Elizabeth J. Elsmo, Mark Craven
Software Mentions: 2
Published: almost 7 years ago
10.1371/journal.pmed.1003354
Risk of disease and willingness to vaccinate in the United States: A population-based survey
Cited by: 51
Author(s): Bert Baumgaertner, Benjamin J. Ridenhour, Florian Justwan, Juliet E. Carlisle, Craig R. Miller
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pcbi.1007626
Mathematical modeling to reveal breakthrough mechanisms in the HIV Antibody Mediated Prevention (AMP) trials
Cited by: 18
Author(s): Daniel B. Reeves, Yunda Huang, Elizabeth R Duke, Bryan T. Mayer, E Fabian Cardozo-Ojeda, Florencia A.T. Boshier, David A. Swan, Morgane Rolland, Merlin L. Robb, John R. Mascola, Myron S. Cohen, Lawrence Corey, Peter B. Gilbert, Joshua T. Schiffer
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0234759
Tunica intima compensation for reduced stiffness of the tunica media in aging renal arteries as measured with scanning acoustic microscopy
Cited by: 2
Author(s): Katsutoshi Miura
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pcbi.1008453
DeepPheno: Predicting single gene loss-of-function phenotypes using an ontology-aware hierarchical classifier
Cited by: 14
Author(s): Maxat Kulmanov, Robert Hoehndorf
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0240349
A daily diary study on adolescents’ mood, empathy, and prosocial behavior during the COVID-19 pandemic
Cited by: 82
Author(s): Suzanne van de Groep, Kiki Zanolie, Kayla H. Green, Sophie Sweijen, Eveline A. Crone
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pone.0229973
Real word evidence on rituximab utilization: Combining administrative and hospital-pharmacy data
Cited by: 4
Author(s): Giuseppe Roberto, Andrea Spini, Claudia Bartolini, Valentino Moscatelli, Alessandro Barchielli, Davide Paoletti, Silvano Giorgi, Alberto Fabbri, Monica Bocchia, Sandra Donnini, Rosa Gini, Marina Ziche
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pcbi.1008781
Public Baseline and shared response structures support the theory of antibody repertoire functional commonality
Cited by: 18
Author(s): Matthew I. J. Raybould, Claire Marks, Aleksandr Kovaltsuk, Alan P. Lewis, Jiye Shi, Charlotte Deane
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0239490
Influence of COVID-19 confinement on students’ performance in higher education
Cited by: 406
Author(s): Thalita Barbosa González, M.A. de la Rubia, Kajetan Piotr Hincz, M. Comas-Lopez, Laia Subirats, Santi Fort, G. M. Sacha
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pone.0251692
What makes music memorable? Relationships between acoustic musical features and music-evoked emotions and memories in older adults
Cited by: 9
Author(s): Ilja Salakka, Anni Pitkäniemi, Emmi Pentikäinen, Kari Mikkonen, Pasi Saari, Petri Toiviainen, Teppo Särkämö
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0256795
Role of informal healthcare providers in tuberculosis care in low- and middle-income countries: A systematic scoping review
Cited by: 9
Author(s): Poshan Thapa, Rohan Jayasuriya, John Hall, Kristen Beek, Parthasarathi Mukherjee, Nachiket Gudi, Padmanesan Narasimhan
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pmed.1003325
Switch to second-line versus continued first-line antiretroviral therapy for patients with low-level HIV-1 viremia: An open-label randomized controlled trial in Lesotho
Cited by: 13
Author(s): Alain Amstutz, Bienvenu Lengo Nsakala, Fiona Vanobberghen, Josephine Muhairwe, Tracy R. Glass, Tilo Namane, Tlali Mpholo, Manuel Battegay, Thomas Klimkait, Niklaus Daniel Labhardt
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pone.0253296
Alcohol unleashes homo economicus by inhibiting cooperation
Cited by: 2
Author(s): Paul J. Zak, Kylene Hayes, Elizabeth L. Paulson, Edward Peter Stringham
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pcbi.1007818
Insights into adenosine A2A receptor activation through cooperative modulation of agonist and allosteric lipid interactions
Cited by: 18
Author(s): Agustín Bruzzese, James A. R. Dalton, Jesús Giraldo
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0236952
Implementation of an automated scheduling tool improves schedule quality and resident satisfaction
Cited by: 11
Author(s): Frederick M. Howard, Catherine Gao, Christopher Sankey
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0240127
Motion magnification analysis of microscopy videos of biological cells
Cited by: 3
Author(s): Oren Shabi, Sari Natan, Avraham Kolel, Angshuman Mukherjee, Oren Tchaicheeyan, Haguy Wolfenson, Nahum Kiryati, Ayelet Lesman
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pmed.1003190
Universal third-trimester ultrasonic screening using fetal macrosomia in the prediction of adverse perinatal outcome: A systematic review and meta-analysis of diagnostic test accuracy
Cited by: 20
Author(s): Alexandros A Moraitis, Norman Shreeve, Ulla Sovio, Peter Brocklehurst, Alexander E P Heazell, Jim Thornton, Stephen C. Robson, Aris T. Papageorghiou, Gordon C. S. Smith
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pone.0256181
Identification and functional modelling of plausibly causative cis-regulatory variants in a highly-selected cohort with X-linked intellectual disability
Cited by: 1
Author(s): Hemant Bengani, Detelina Grozeva, Lambert Moyon, Shipra Bhatia, Susana R. Louros, Jilly Hope, Adam D. Jackson, James Prendergast, Liusaidh J Owen, Magali Naville, Jacqueline K. Rainger, Graeme R. Grimes, Mihail Halachev, Laura C. Murphy, Olivera Spasić-Bošković, Veronica van Heyningen, P. Kind, Catherine M. Abbott, Emily K. Osterweil, F. Lucy Raymond, Hugues Roest Crollius, David R. FitzPatrick
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pcbi.1009176
Adaptive control of movement deceleration during saccades
Cited by: 8
Author(s): Simon P. Orozco, Scott T. Albert, Reza Shadmehr
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0250308
Aerosol-generating behaviours in speech pathology clinical practice: A systematic literature review
Cited by: 8
Author(s): Antonia Chacon, Duy Duong Nguyên, Patricia McCabe, Catherine Madill
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pcbi.1008464
Drug2ways: Reasoning over causal paths in biological networks for drug discovery
Cited by: 18
Author(s): Daniel Rivas, Sarah Mubeen, Francesc Guim Bernat, Martin Hofmann‐Apitius, Daniel Domingo‐Fernándéz
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pcbi.1007895
A systematic machine learning and data type comparison yields metagenomic predictors of infant age, sex, breastfeeding, antibiotic usage, country of origin, and delivery type
Cited by: 18
Author(s): Le Goallec A, Braden T. Tierney, Jacob M. Luber, Evan M. Cofer, Aleksandar D. Kostic, Chirag Patel
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0237647
Patients’ and healthcare professionals’ perspectives towards technology-assisted diabetes self-management education. A qualitative systematic review
Cited by: 27
Author(s): Sneha Rajiv Jain, Shuai Yuan, Cheng Han Ng, Zhi Xiong Chen, Lay Hoon Goh, Shefaly Shorey
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pone.0248787
Genetic analysis of a potato (Solanum tuberosum L.) breeding collection for southern Colombia using Single Nucleotide Polymorphism (SNP) markers
Cited by: 8
Author(s): Jhon A. Berdugo-Cely, Carolina Martínez-Moncayo, Túlio César Lagos Burbano
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pcbi.1008510
Activity-mediated accumulation of potassium induces a switch in firing pattern and neuronal excitability type
Cited by: 5
Author(s): Susana Andrea Contreras, Jan-Hendrik Schleimer, Allan T. Gulledge, Susanne Schreiber
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0223717
Can non-pharmacological interventions reduce hospital admissions in people with dementia? A systematic review
Cited by: 7
Author(s): Richard Packer, Yoav Ben-Shlomo, Paul J. Whiting
Software Mentions: 2
Published: about 7 years ago
10.1371/journal.pone.0257135
Exploring women’s decisions of where to give birth in the Peruvian Amazon; why do women continue to give birth at home? A qualitative study
Cited by: 1
Author(s): Esme Gardiner, Jo Lai, Divya Khanna, Graciella Meza, Gilles de Wildt, Roger Taylor
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0227037
Link-centric analysis of variation by demographics in mobile phone communication patterns
Cited by: 9
Author(s): Mikaela Irene D. Fudolig, Kunal Bhattacharya, Daniel Monsivais, Hang-Hyun Jo, Kimmo Kaski
Software Mentions: 2
Published: almost 7 years ago
10.1371/journal.pcbi.1008679
Estimating the time-varying reproduction number of COVID-19 with a state-space method
Cited by: 23
Author(s): Shinsuke Koyama, Taiki Horie, Shigeru Shinomoto
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pmed.1003383
Violence prevention accelerators for children and adolescents in South Africa: A path analysis using two pooled cohorts
Cited by: 21
Author(s): Lucie Cluver, William E. Rudgard, Elona Toska, Siyanai Zhou, Laurence Campeau, Yulia Shenderovich, Mark Orkin, Chris Desmond, Alexander Butchart, Howard Taylor, Franziska Meinck, Lorraine Sherr
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pmed.1003006
Chemotherapy effectiveness in trial-underrepresented groups with early breast cancer: A retrospective cohort study
Cited by: 13
Author(s): Ewan Gray, Joachim Marti, Jeremy Wyatt, David H. Brewster, Peter Hall
Software Mentions: 2
Published: almost 7 years ago