Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: GenomeTreeTk

https://packages.ecosyste.ms/registries/pypi.org/packages/GenomeTreeTk

A toolbox for working with genome trees.
14 versions
Latest release: over 4 years ago
55 downloads last month

Papers Mentioning GenomeTreeTk 3

10.1186/s40168-021-01078-x
An integrated gene catalog and over 10,000 metagenome-assembled genomes from the gastrointestinal microbiome of ruminants
Cited by: 85
Author(s): Fei Xie, Wei Jin, Huazhe Si, Yuan Yuan, Ye Tao, Junhua Liu, Xiaoxu Wang, Chengjian Yang, Qiushuang Li, Xiu-Tian Yan, Limei Lin, Qian Jiang, Lei Zhang, Chang Guo, Chris Greening, Rasmus Heller, Le Luo Guan, Phillip B. Pope, Zhiliang Tan, Weiyun Zhu, Min Wang, Qiang Qiu, Zhipeng Li, Shengyong Mao
Software Mentions: 8
Published: over 3 years ago
10.1038/s41396-020-00876-9
A genomic view of the microbiome of coral reef demosponges
Cited by: 56
Author(s): Steven J. Robbins, Weizhi Song, J. Pamela Engelberts, Bettina Glasl, Beate M. Slaby, Joel A. Boyd, Emma Marangon, Emmanuelle S. Botté, Patrick W. Laffy, Torsten Thomas, Nicole S. Webster
Software Mentions: 3
Published: almost 4 years ago
10.3389/fmicb.2018.03263
Host Specificity and Spatial Distribution Preference of Three Pseudomonas Isolates
Cited by: 14
Author(s): Nesli Tovi, Sammy Frenk, Yitzhak Hadar, Dror Minz
Software Mentions: 1
Published: almost 6 years ago