Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: GPy

https://packages.ecosyste.ms/registries/pypi.org/packages/GPy

The Gaussian Process Toolbox
39 versions
Latest release: over 1 year ago
10 dependent packages
66,914 downloads last month

Papers Mentioning GPy 29

10.1002/1873-3468.12684
Computational approaches for interpreting sc <scp>RNA</scp> ‐seq data
Cited by: 111
Author(s): Raghd Rostom, Valentine Svensson, Sarah A. Teichmann, Gozde Kar
Software Mentions: 14
Published: over 7 years ago
10.1038/s41598-018-29523-2
Prognostication and Risk Factors for Cystic Fibrosis via Automated Machine Learning
Cited by: 46
Author(s): Ahmed M. Alaa, Mihaela van der Schaar
Software Mentions: 8
Published: over 6 years ago
10.1016/j.immuni.2019.01.001
Single-Cell Transcriptomics of Regulatory T Cells Reveals Trajectories of Tissue Adaptation
Cited by: 322
Author(s): Ricardo J. Miragaia, Tomás Gomes, Agnieszka Chomka, Laura Jardine, Angela Riedel, Ahmed N. Hegazy, Natasha Whibley, A. Tucci, Xi Chen, Ida Lindeman, Guy Emerton, Thomas Krausgruber, Jacqueline D. Shields, Muzlifah Haniffa, Fiona Powrie, Sarah A. Teichmann
Software Mentions: 6
Published: almost 6 years ago
10.1002/eap.2081
Regional mapping of species‐level continuous foliar cover: beyond categorical vegetation mapping
Cited by: 5
Author(s): Timm Nawrocki, Matthew L. Carlson, Jeanne L. D. Osnas, E. Jamie Trammell, Frank D. W. Witmer
Software Mentions: 4
Published: over 4 years ago
10.1016/j.celrep.2015.12.082
Single-Cell RNA-Sequencing Reveals a Continuous Spectrum of Differentiation in Hematopoietic Cells
Cited by: 157
Author(s): Iain C. Macaulay, Valentine Svensson, Charlotte Labalette, Lauren Ferreira, Fiona Hamey, Thierry Voet, Sarah A. Teichmann, Ana Cvejic
Software Mentions: 4
Published: almost 9 years ago
10.1016/j.ydbio.2016.06.016
Developmentally regulated long non-coding RNAs in Xenopus tropicalis
Cited by: 17
Author(s): Elmira Forouzmand, Nick Owens, Ira L. Blitz, Kitt D. Paraiso, Mustafa K. Khokha, Michael J. Gilchrist, Xiaohui Xie, Ken W.Y. Cho
Software Mentions: 4
Published: over 7 years ago
10.1093/bioinformatics/bty533
GrandPrix: scaling up the Bayesian GPLVM for single-cell data
Cited by: 37
Author(s): Sumon Ahmed, Magnus Rattray, Alexis Boukouvalas
Software Mentions: 3
Published: over 6 years ago
10.3390/s21123972
Development of Magnetic-Based Navigation by Constructing Maps Using Machine Learning for Autonomous Mobile Robots in Real Environments
Cited by: 3
Author(s): Takumi Takebayashi, Renato Miyagusuku, Koichi Ozaki
Software Mentions: 3
Published: over 3 years ago
10.1186/s12918-017-0484-3
Bayesian uncertainty analysis for complex systems biology models: emulation, global parameter searches and evaluation of gene functions
Cited by: 41
Author(s): Ian Vernon, Junli Liu, Michael Goldstein, James Rowe, Jen Topping, Keith Lindsey
Software Mentions: 3
Published: almost 7 years ago
10.1371/journal.pone.0249593
Identifying geographically differentiated features of Ethopian Nile tilapia (Oreochromis niloticus) morphology with machine learning
Cited by: 3
Author(s): Wilfried Wöber, Manuel Curto, Papius Dias Tibihika, Paul Meulenbroek, Esayas Alemayehu, Lars Mehnen, Harald Meimberg, Peter Sykacek
Software Mentions: 3
Published: over 3 years ago
10.1186/s13059-017-1269-0
MATCHER: manifold alignment reveals correspondence between single cell transcriptome and epigenome dynamics
Cited by: 128
Author(s): Joshua D. Welch, Alexander J. Hartemink, Jan F. Prins
Software Mentions: 3
Published: over 7 years ago
10.1186/s12911-020-1069-4
Sparse multi-output Gaussian processes for online medical time series prediction
Cited by: 23
Author(s): Li Cheng, Bianca Dumitrascu, Gregory Darnell, Corey Chivers, Michael Draugelis, Kai Li, Barbara E. Engelhardt
Software Mentions: 2
Published: over 4 years ago
10.1371/journal.pcbi.1007205
Bayesian hypothesis testing and experimental design for two-photon imaging data
Cited by: 6
Author(s): Luke Edward Rogerson, Zhijian Zhao, Katrin Franke, Thomas Euler, Philipp Berens
Software Mentions: 2
Published: over 5 years ago
10.1093/cercor/bhaa069
Heterogeneity in Brain Microstructural Development Following Preterm Birth
Cited by: 51
Author(s): Ralica Dimitrova, Maximilian Pietsch, Daan Christiaens, Judit Ciarrusta, Thomas Wolfers, Dafnis Batalle, Emer Hughes, Jana Hutter, Lucilio Cordero‐Grande, Anthony N. Price, Andrew Chew, Shona Falconer, Katy Vecchiato, Johannes K. Steinweg, Olivia Carney, Mary Rutherford, J-Donald Tournier, Serena J. Counsell, André F. Marquand, Daniel Rueckert, Joseph V. Hajnal, Gráinne McAlonan, A. David Edwards, Jonathan O’Muircheartaigh
Software Mentions: 2
Published: over 4 years ago
10.1038/s41598-020-71856-4
Bayesian optimisation of restriction zones for bluetongue control
Cited by: 3
Author(s): Thomas Spooner, Anne E Jones, John Fearnley, Rahul Savani, Joanne Turner, Matthew Baylis
Software Mentions: 2
Published: about 4 years ago
10.3390/s21072483
Appearance-Based Sequential Robot Localization Using a Patchwise Approximation of a Descriptor Manifold
Cited by: 5
Author(s): Alberto Jaenal, Francisco-Ángel Moreno, Javier González-Jiménez
Software Mentions: 2
Published: over 3 years ago
10.1177/2331216518776817
Application of Data Mining to “Big Data” Acquired in Audiology: Principles and Potential
Cited by: 19
Author(s): Joseph Mellor, Michael Stone, John Keane
Software Mentions: 2
Published: almost 7 years ago
10.1128/mSystems.00508-21
AMiGA: Software for Automated Analysis of Microbial Growth Assays
Cited by: 11
Author(s): Firas S Midani, James W. Collins, Robert A. Britton
Software Mentions: 2
Published: about 3 years ago
10.1177/2331216518773632
Application of Data Mining to a Large Hearing-Aid Manufacturer’s Dataset to Identify Possible Benefits for Clinicians, Manufacturers, and Users
Cited by: 9
Author(s): Joseph Mellor, Michael Stone, John Keane
Software Mentions: 1
Published: almost 7 years ago
10.1038/s41598-021-93474-4
Use of Gaussian process regression for radiation mapping of a nuclear reactor with a mobile robot
Cited by: 21
Author(s): Andrew West, Ioannis Tsitsimpelis, M. Licata, Anz E Jazbec, Luka Snoj, Malcolm J. Joyce, Barry Lennox
Software Mentions: 1
Published: over 3 years ago
10.3390/s19112508
Wireless Indoor Localization Using Convolutional Neural Network and Gaussian Process Regression
Cited by: 33
Author(s): Guolong Zhang, Ping Wang, Haibing Chen, Lan Zhang
Software Mentions: 1
Published: over 5 years ago
10.3390/s20133663
An Integrated Strategy for Autonomous Exploration of Spatial Processes in Unknown Environments
Cited by: 3
Author(s): Valentina Karolj, Alberto Viseras, Luís Merino, Dmitriy Shutin
Software Mentions: 1
Published: over 4 years ago
10.3390/s20144028
Elevation Angle Estimations of Wide-Beam Acoustic Sonar Measurements for Autonomous Underwater Karst Exploration
Cited by: 3
Author(s): Yohan Breux, Lionel Lapierre
Software Mentions: 1
Published: over 4 years ago
10.1007/s11548-020-02284-y
A generative model of hyperelastic strain energy density functions for multiple tissue brain deformation
Cited by: 2
Author(s): Alejandro Granados, Fernando Pérez‐García, Martin Schweiger, Vejay N. Vakharia, Sjoerd B. Vos, Anna Miserocchi, Andrew W. McEvoy, John S. Duncan, Rachel Sparks, Sébastien Ourselin
Software Mentions: 1
Published: about 4 years ago
10.1093/brain/awz412
Modelling brain development to detect white matter injury in term and preterm born neonates
Cited by: 41
Author(s): Jonathan O’Muircheartaigh, Emma C. Robinson, Maximillian Pietsch, Thomas Wolfers, Paul Aljabar, Lucilio Cordero‐Grande, Rui Pedro A. G. Teixeira, Jelena Božek, Andreas Schuh, Antonios Makropoulos, Dafnis Batalle, Jana Hutter, Katy Vecchiato, Johannes K. Steinweg, Sean P. Fitzgibbon, Emer Hughes, Anthony N. Price, André F. Marquand, Daniel Reuckert, Mary Rutherford, Joseph V. Hajnal, Serena J. Counsell, A. David Edwards
Software Mentions: 1
Published: almost 5 years ago
10.1093/cercor/bhab039
Phenotyping the Preterm Brain: Characterizing Individual Deviations From Normative Volumetric Development in Two Large Infant Cohorts
Cited by: 15
Author(s): Ralica Dimitrova, S Arulkumaran, Olivia Carney, Andrew Chew, Shona Falconer, Judit Ciarrusta, Thomas Wolfers, Dafnis Batalle, Lucilio Cordero‐Grande, Anthony N. Price, Teixeira Rpag., Emer Hughes, Alexia Egloff, Jana Hutter, Antonios Makropoulos, Emma C. Robinson, Andreas Schuh, Katy Vecchiato, Johannes K. Steinweg, Russell Macleod, André F. Marquand, Gráinne McAlonan, Mary Rutherford, Serena J. Counsell, Stephen M. Smith, Daniel Rueckert, Joseph V. Hajnal, Jonathan O’Muircheartaigh, A. David Edwards
Software Mentions: 1
Published: over 3 years ago
10.1371/journal.pcbi.1005722
Data driven flexible backbone protein design
Cited by: 13
Author(s): Mark Sun, Philip M. Kim
Software Mentions: 1
Published: about 7 years ago
10.1093/braincomms/fcab046
Individualized brain development and cognitive outcome in infants with congenital heart disease
Cited by: 13
Author(s): Alexandra F Bonthrone, Ralica Dimitrova, Andrew Chew, Christopher Kelly, Lucilio Cordero‐Grande, Olivia Carney, Alexia Egloff, Emer Hughes, Katy Vecchiato, John Simpson, Joseph V. Hajnal, Kuberan Pushparajah, Suresh Victor, Chiara Nosarti, Mary Rutherford, A. David Edwards, Jonathan O’Muircheartaigh, Serena J. Counsell
Software Mentions: 1
Published: over 3 years ago
10.1038/s41598-018-31637-6
Strongly Coupled Morphological Features of Aortic Aneurysms Drive Intraluminal Thrombus
Cited by: 18
Author(s): Druv Bhagavan, Paolo Di Achille, Jay D. Humphrey
Software Mentions: 1
Published: about 6 years ago