Projects: pypi: DeFCoM
https://packages.ecosyste.ms/registries/pypi.org/packages/DeFCoM
A supervised learning genomic footprinter
3 versions
Latest release: almost 3 years ago
7 downloads last month
Science Score: 80/100
Starting Score: 100 points
Bonuses:
Penalties:
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-10
PyPI ecosystem
General-purpose ecosystem -
-10
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Very Likely Science (80)
Papers Mentioning DeFCoM 3
10.1186/s13059-020-1929-3
From reads to insight: a hitchhiker’s guide to ATAC-seq data analysisCited by: 231
Author(s): Feng Yan, David Powell, David Curtis, Nicholas C. Wong
Software Mentions: 21
Published: over 6 years ago
10.3389/fbioe.2020.00886
regSNPs-ASB: A Computational Framework for Identifying Allele-Specific Transcription Factor Binding From ATAC-seq DataCited by: 2
Author(s): Siwen Xu, Weixing Feng, Zixiao Lu, Christina Y. Yu, Wei Shao, Harikrishna Nakshatri, Jill L. Reiter, Hongyu Gao, Xun Chu, Yue Wang, Yunlong Liu
Software Mentions: 4
Published: almost 6 years ago
10.1186/s13059-019-1642-2
Identification of transcription factor binding sites using ATAC-seqCited by: 284
Author(s): Li Z, Marcel H. Schulz, Thomas Look, Matthias Begemann, Martin Zenke, Ivan G. Costa
Software Mentions: 3
Published: over 7 years ago