Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: DeFCoM

https://packages.ecosyste.ms/registries/pypi.org/packages/DeFCoM

A supervised learning genomic footprinter
3 versions
Latest release: over 1 year ago
7 downloads last month

Papers Mentioning DeFCoM 3

10.1186/s13059-020-1929-3
From reads to insight: a hitchhiker’s guide to ATAC-seq data analysis
Cited by: 231
Author(s): Feng Yan, David Powell, David Curtis, Nicholas C. Wong
Software Mentions: 21
Published: almost 5 years ago
10.3389/fbioe.2020.00886
regSNPs-ASB: A Computational Framework for Identifying Allele-Specific Transcription Factor Binding From ATAC-seq Data
Cited by: 2
Author(s): Siwen Xu, Weixing Feng, Zixiao Lu, Christina Y. Yu, Wei Shao, Harikrishna Nakshatri, Jill L. Reiter, Hongyu Gao, Xun Chu, Yue Wang, Yunlong Liu
Software Mentions: 4
Published: over 4 years ago
10.1186/s13059-019-1642-2
Identification of transcription factor binding sites using ATAC-seq
Cited by: 284
Author(s): Li Z, Marcel H. Schulz, Thomas Look, Matthias Begemann, Martin Zenke, Ivan G. Costa
Software Mentions: 3
Published: almost 6 years ago