pypi: DataAnalysis | Projects | Ecosyste.ms: Papers

10.1038/s41598-017-00703-w

Ultra-High Mass Resolution MALDI Imaging Mass Spectrometry of Proteins and Metabolites in a Mouse Model of Glioblastoma
Cited by: 131
Author(s): Marialaura Dilillo, Rima Ait-Belkacem, Clara Esteve, Davide Pellegrini, Simone Nicolardi, Mario Costa, Eleonora Vannini, Erik L. de Graaf, Matteo Caleo, Liam A. McDonnell
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-02465-x

Proteomic comparisons of opaque and transparent variants of Streptococcus pneumoniae by two dimensional-differential gel electrophoresis
Cited by: 4
Author(s): Melissa Hui Chieh Chai, Florian Weiland, Richard M. Harvey, Peter Hoffmann, Abiodun D. Ogunniyi, James C. Paton
Software Mentions: 1
Published: over 7 years ago

10.3390/ijms22094295

Salivary Proteome Changes in Response to Acute Psychological Stress Due to an Oral Exam Simulation in University Students: Effect of an Olfactory Stimulus
Cited by: 8
Author(s): Lorenzo Zallocco, Laura Giusti, Maurizio Ronci, Andrea Mussini, Marco Trerotola, Maria Rosa Mazzoni, Antonio Lucacchini, Laura Sebastiani
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-017-03838-y

Sialic acid linkage differentiation of glycopeptides using capillary electrophoresis – electrospray ionization – mass spectrometry
Cited by: 76
Author(s): Guinevere S. M. Kammeijer, Bas C. Jansen, Isabelle Köhler, Anthonius A. M. Heemskerk, Oleg A. Mayboroda, Paul J. Hensbergen, Julie Schappler, Manfred Wuhrer
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-13908-w

Palmitate-induced lipotoxicity alters acetylation of multiple proteins in clonal β cells and human pancreatic islets
Cited by: 42
Author(s): Federica Ciregia, Marco Bugliani, Maurizio Ronci, Laura Giusti, Claudia Boldrini, Maria Rosa Mazzoni, Sandra Mossuto, Francesca Grano, Miriam Cnop, Lorella Marselli, Gino Giannaccini, Andrea Urbani, Antonio Lucacchini, Piero Marchetti
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-017-16648-z

Non-invasive and invasive diagnoses of aspergillosis in a rat model by mass spectrometry
Cited by: 21
Author(s): Dominika Luptáková, Tomáš Pluháček, Miloš Petřík, Jiří Novák, Andrea Palyzová, Lucie Sokolová, Anton Škríba, Blanka Šedivá, Karel Lemr, Vladimı́r Havlı́ček
Software Mentions: 1
Published: almost 7 years ago

10.1007/s00216-020-02661-1

Evaluation of LC-MS and LC×LC-MS in analysis of zebrafish embryo samples for comprehensive lipid profiling
Cited by: 17
Author(s): Mengmeng Xu, Jessica Legradi, P.E.G. Leonards
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-018-23575-0

Extensive molecular tinkering in the evolution of the membrane attachment mode of the Rheb GTPase
Cited by: 11
Author(s): Kristína Záhonová, Romana Petrželková, Matus Valach, Euki Yazaki, Denis V. Tikhonenkov, Anzhelika Butenko, Jan Janouškovec, Štěpánka Hrdá, Vladimír Klimeš, Gertraud Burger, Yuji Inagaki, Patrick J. Keeling, Vladimı́r Hampl, Pavel Flegontov, Vyacheslav Yurchenko, Marek Eliáš
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-24012-y

Metabolomics and proteomics reveal drought-stress responses of leaf tissues from spring-wheat
Cited by: 165
Author(s): Anna Michaletti, Mohammad Reza Naghavi, Mahmoud Toorchi, L. Zolla, Sara Rinalducci
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-25088-2

Membrane depolarization and aberrant lipid distributions in the neonatal rat brain following hypoxic-ischaemic insult
Cited by: 9
Author(s): Dominika Luptáková, Ladislav Bačiak, Tomáš Pluháček, Anton Škríba, Blanka Šedivá, Vladimı́r Havlı́ček, Ivo Juránek
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-28070-0

Granzyme B is elevated in autoimmune blistering diseases and cleaves key anchoring proteins of the dermal-epidermal junction
Cited by: 44
Author(s): Valerio Russo, Théo Klein, Darielle J. Lim, Nestor Solis, Yoan Machado, Sho Hiroyasu, Layla Nabai, Yue Shen, Matthew R. Zeglinski, Hongyan Zhao, Cameron Oram, Peter Lennox, Nancy Van Laeken, Nicholas Carr, Richard Crawford, Claus‐Werner Franzke, Christopher M. Overall, David J. Granville
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-28296-y

Spermine increases acetylation of tubulins and facilitates autophagic degradation of prion aggregates
Cited by: 23
Author(s): Kanchan Phadwal, Dominic Kurian, Muhammad Khalid Farooq Salamat, Vicky MacRae, Abigail B. Diack, Jean Manson
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-33044-3

Bridging of membrane surfaces by annexin A2
Cited by: 19
Author(s): David Grill, Anna Lívia Linard Matos, Wilke C. de Vries, Sergej Kudruk, Milena Heflik, Wolfgang Dörner, Henning D. Mootz, Bart Jan Ravoo, Hans‐Joachim Galla, Volker Gerke
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-018-33372-4

Adaptive effect of sericin on hepatic mitochondrial conformation through its regulation of apoptosis, autophagy and energy maintenance: a proteomics approach
Cited by: 13
Author(s): Sumate Ampawong, Duangnate Isarangkul, Onrapak Reamtong, Pornanong Aramwit
Software Mentions: 1
Published: about 6 years ago

10.1007/s00216-017-0235-8

Determination of true ratios of different N-glycan structures in electrospray ionization mass spectrometry
Cited by: 36
Author(s): Clemens Grünwald‐Gruber, A. Thader, Daniel Maresch, Thomas Dalik, Friedrich Altmann
Software Mentions: 1
Published: over 7 years ago

10.3390/ijms22126325

Preclinical Development of FA5, a Novel AMP-Activated Protein Kinase (AMPK) Activator as an Innovative Drug for the Management of Bowel Inflammation
Cited by: 4
Author(s): Luca Antonioli, Carolina Pellegrini, Matteo Fornai, Laura Benvenuti, Vanessa D’Antongiovanni, Rocchina Colucci, Lorenzo Bertani, Clelia Di Salvo, Giorgia Semeghini, Concettina La Motta, Laura Giusti, Lorenzo Zallocco, Maurizio Ronci, Luca Quattrini, Francesco Angelucci, Vito Coviello, Won Keun Oh, Quy Thi Kim Ha, Zoltán Németh, György Haskó, Corrado Blandizzi
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-018-38036-x

Leaf Disc Assays for Rapid Measurement of Antioxidant Activity
Cited by: 27
Author(s): Deepak M. Kasote, G.K. Jayaprakasha
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-019-39691-4

An uncharacterized FMAG_01619 protein from Fusobacterium mortiferum ATCC 9817 demonstrates that some bacterial macrodomains can also act as poly-ADP-ribosylhydrolases
Cited by: 5
Author(s): Antonio Ginés García-Saura, Rubén Zapata-Pérez, José Francisco Hidalgo, Juana Cabanes, F. Gil-Ortiz, Álvaro Sánchez‐Ferrer
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-41276-0

pH effects on plant calcium fluxes: lessons from acidification-mediated calcium elevation induced by the γ-glutamyl-leucine dipeptide identified from Phytophthora infestans
Cited by: 13
Author(s): Lore Westphal, Nadine Strehmel, Lennart Eschen‐Lippold, Nicole Bauer, Bernhard Westermann, Sabine Rosahl, Dierk Scheel, Justin Lee
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-60861-2

Photoinduced damage of AsLOV2 domain is accompanied by increased singlet oxygen production due to flavin dissociation
Cited by: 6
Author(s): Martina Petrenčáková, František Filandr, Andrej Hovan, Ghazaleh Yassaghi, Petr Man, Tibor Kožár, Marc-Simon Schwer, Daniel Jancura, Andreas Plückthun, Petr Novák, Pavol Miškovský, Gregor Bánó, Erik Sedlák
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-65443-w

Characterization of the zinc finger proteins ZMYM2 and ZMYM4 as novel B-MYB binding proteins
Cited by: 8
Author(s): Hannah Cibis, Abhiruchi Biyanee, Wolfgang Dörner, Henning D. Mootz, Karl‐Heinz Klempnauer
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-68969-1

Glucose counteracts wood-dependent induction of lignocellulolytic enzyme secretion in monokaryon and dikaryon submerged cultures of the white-rot basidiomycete Pleurotus ostreatus
Cited by: 25
Author(s): Manuel Alfaro, Andrzej Majcherczyk, Ursula Kües, Lucı́a Ramı́rez, Antonio G. Pisabarro
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-70385-4

Mass spectrometry imaging as a potential technique for diagnostic of Huanglongbing disease using fast and simple sample preparation
Cited by: 22
Author(s): João Guilherme de Moraes Pontes, Pedro Henrique Vendramini, Laura Soler Fernandes, Fabricio Henrique de Souza, Eduardo Jorge Pilau, Marcos N. Eberlin, R. Magnani, Nelson Arno Wulff, Taícia Pacheco Fill
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-71374-3

Palaeoproteomics gives new insight into early southern African pastoralism
Cited by: 14
Author(s): Louise Le Meillour, Séverine Zirah, Antoine Zazzo, Sophie Cersoy, Florent Détroit, Emma Imalwa, Matthieu Lebon, Alma Nankela, Olivier Tombret, David Pleurdeau, Joséphine Lesur
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-020-71653-z

The type VII secretion system protects Staphylococcus aureus against antimicrobial host fatty acids
Cited by: 18
Author(s): Arnaud Kengmo Tchoupa, Kate E. Watkins, Rebekah A. Jones, Agnès Kuroki, Mohammad Tauqeer Alam, Sébastien Perrier, Yin Chen, Meera Unnikrishnan
Software Mentions: 1
Published: about 4 years ago

10.1007/s00216-012-5968-9

Analysis of urinary oligosaccharides in lysosomal storage disorders by capillary high-performance anion-exchange chromatography–mass spectrometry
Cited by: 30
Author(s): Cees Bruggink, Ben J. H. M. Poorthuis, André M. Deelder, Manfred Wuhrer
Software Mentions: 1
Published: over 12 years ago

10.1007/s00216-015-8487-7

Comparison of modification sites in glycated crystallin in vitro and in vivo
Cited by: 8
Author(s): Martyna Kielmas, Monika Kijewska, Alicja Kluczyk, Jolanta Oficjalska, Bożena Gołębiewska, Piotr Stefanowicz, Zbigniew Szewczuk
Software Mentions: 1
Published: almost 10 years ago

10.3390/ijms22147678

A New N-Substituted 1H-Isoindole-1,3(2H)-Dione Derivative—Synthesis, Structure and Affinity for Cyclooxygenase Based on In Vitro Studies and Molecular Docking
Cited by: 6
Author(s): Dominika Szkatuła, Edward Krzyżak, Paulina Stanowska, Magdalena Duda, Benita Wiatrak
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-021-81917-x

Sex steroids and steroidogenesis-related genes in the sea cucumber, Holothuria scabra and their potential role in gonad maturation
Cited by: 11
Author(s): Tipsuda Thongbuakaew, Saowaros Suwansa‐ard, Arada Chaiyamoon, Scott F. Cummins, Prasert Sobhon
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12906-018-2292-8

Sources for developing new medicinal products: biochemical investigations on alcoholic extracts obtained from aerial parts of some Romanian Amaryllidaceae species
Cited by: 18
Author(s): Daniela Benedec, Ilioara Oniga, Daniela Hanganu, Ana Maria Gheldiu, Cristina Pușcaș, Radu Silaghi‐Dumitrescu, Mihaela Duma, Brînduşa Tiperciuc, Rodica Vârban, Laurian Vlase
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2164-11-45

Novel OBP genes similar to hamster Aphrodisin in the bank vole, Myodes glareolus
Cited by: 30
Author(s): Romana Stopková, Zbyněk Zdráhal, Štěpán Ryba, Ondřej Šedo, Martin Šandera, Pavel Stopka
Software Mentions: 1
Published: almost 15 years ago

10.1186/s12866-019-1575-7

Peptidoglycan-type analysis of the N-acetylmuramic acid auxotrophic oral pathogen Tannerella forsythia and reclassification of the peptidoglycan-type of Porphyromonas gingivalis
Cited by: 6
Author(s): Valentina M. T. Mayer, Isabel Hottmann, Rudolf Figl, Friedrich Altmann, Christoph Mayer, Christina Schäffer
Software Mentions: 1
Published: about 5 years ago

10.1186/s12906-019-2655-9

Variation in the metabolites and α-glucosidase inhibitory activity of Cosmos caudatus at different growth stages
Cited by: 8
Author(s): Wan Ahmad Wan-Nadilah, Muhammad Tayyab Akhtar, Khozirah Shaari, Alfi Khatib, Azizah Abdul Hamid, Muhajir Hamid
Software Mentions: 1
Published: about 5 years ago

10.1186/1471-2180-12-189

A proteomic investigation of Fusobacterium nucleatum alkaline-induced biofilms
Cited by: 30
Author(s): Jactty Chew, Peter Zilm, Janet Fuss, N. J. Gully
Software Mentions: 1
Published: about 12 years ago

10.1186/1471-2180-14-158

OmpU as a biomarker for rapid discrimination between toxigenic and epidemic Vibrio cholerae O1/O139 and non-epidemic Vibrio cholerae in a modified MALDI-TOF MS assay
Cited by: 17
Author(s): Armand Paauw, Hein Trip, Marcin Niemcewicz, Ricela E. Sellek, Jonathan M.E. Heng, Roos H. Mars‐Groenendijk, A.L. de Jong, Joanna A. Majchrzykiewicz-Koehorst, Jaran Strand Olsen, Evgeni Tsivtsivadze
Software Mentions: 1
Published: almost 11 years ago

10.1186/1471-2180-10-219

Characterization and functional analysis of seven flagellin genes in Rhizobium leguminosarum bv. viciae. Characterization of R. leguminosarum flagellins
Cited by: 31
Author(s): Dinah D. Tambalo, Denise E. Bustard, Kate L. Del Bel, Susan F. Koval, Morgan F. Khan, Michael F. Hynes
Software Mentions: 1
Published: over 14 years ago

10.1186/s12891-016-1059-y

Biomarkers of systemic inflammation in farmers with musculoskeletal disorders; a plasma proteomic study
Cited by: 21
Author(s): Bijar Ghafouri, Anders Carlsson, Sara Holmberg, Anders Thelin, Christer Tagesson
Software Mentions: 1
Published: over 8 years ago

10.1186/1471-2229-10-252

Integration of deep transcriptome and proteome analyses reveals the components of alkaloid metabolism in opium poppy cell cultures
Cited by: 106
Author(s): Isabel Desgagné‐Penix, Morgan F. Khan, David C. Schriemer, Dustin Cram, J Nowak, Peter J. Facchini
Software Mentions: 1
Published: about 14 years ago

10.1186/s12870-020-02686-9

Hormonal and metabolites responses in Fusarium wilt-susceptible and -resistant watermelon plants during plant-pathogen interactions
Cited by: 10
Author(s): Deepak M. Kasote, G.K. Jayaprakasha, Kevin Ong, Kevin Crosby, Bhimanagouda S. Patil
Software Mentions: 1
Published: about 4 years ago

10.1186/s12870-020-2293-x

Nerylneryl diphosphate is the precursor of serrulatane, viscidane and cembrane-type diterpenoids in Eremophila species
Cited by: 19
Author(s): Oliver Gericke, Nikolaj L. Hansen, Gustav Blichfeldt Pedersen, Louise Kjærulff, Dan Luo, Dan Stærk, Birger Lindberg Møller, Irini Pateraki, Allison M. Heskes
Software Mentions: 1
Published: over 4 years ago

10.1186/s12917-021-02744-w

Change in the plasma proteome associated with canine cognitive dysfunction syndrome (CCDS) in Thailand
Cited by: 5
Author(s): Sataporn Phochantachinda, Boonrat Chantong, Onrapak Reamtong, Duangthip Chatchaisak
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12917-018-1405-4

Effects of herbal nutraceuticals and/or zinc against Haemonchus contortus in lambs experimentally infected
Cited by: 20
Author(s): Zora Váradyová, Dominika Mravčáková, Michal Babják, Magdalena Bryszak, Ľubomíra Grešáková, Klaudia Čobanová, Svetlana Kišidayová, Iveta Plachá, Alžbeta Königová, Adam Cieślak, Sylwester Ślusarczyk, Łukasz Pecio, Mariusz Kowalczyk, Marián Várady
Software Mentions: 1
Published: over 6 years ago

10.3762/bjnano.11.33

Nanoparticles based on the zwitterionic pillar[5]arene and Ag+: synthesis, self-assembly and cytotoxicity in the human lung cancer cell line A549
Cited by: 14
Author(s): D. N. Shurpik, Denis A. Sevastyanov, П. В. Зеленихин, Pavel L. Padnya, Vladimir G. Evtugyn, Yuriy N Osin, Ivan I. Stoikov
Software Mentions: 1
Published: over 4 years ago

10.3762/bjoc.13.261

An efficient synthesis of 1,6-anhydro-N-acetylmuramic acid from N-acetylglucosamine
Cited by: 6
Author(s): Matthew Calvert, Christoph Mayer, Alexander Titz
Software Mentions: 1
Published: almost 7 years ago

10.3390/bioengineering7040161

Depletion of Boric Acid and Cobalt from Cultivation Media: Impact on Recombinant Protein Production with Komagataella phaffii
Cited by: 3
Author(s): Alexander Pekarsky, Sophia Mihalyi, Maximilian Weiß, Andreas Limbeck, Oliver Spadiut
Software Mentions: 1
Published: almost 4 years ago

10.1177/1177932219868223

Top-Down and Intact Protein Mass Spectrometry Data Visualization for Proteoform Analysis Using VisioProt-MS
Cited by: 6
Author(s): Jean Lesné, Marie‐Pierre Bousquet, Julien Marcoux, Marie Locard‐Paulet
Software Mentions: 1
Published: almost 6 years ago

10.3390/biology10060514

Recovery of Bioactive Compounds from Industrial Exhausted Olive Pomace through Ultrasound-Assisted Extraction
Cited by: 13
Author(s): Irene Gómez‐Cruz, María del Mar Contreras, Florbela Carvalheiro, Luís C. Duarte, Luísa B. Roseiro, Inmaculada Romero, Eulógio Castro
Software Mentions: 1
Published: over 3 years ago

10.3390/biology6040045

Exploring the Glycans of Euglena gracilis
Cited by: 22
Author(s): Ellis C. O’Neill, Sakonwan Kuhaudomlarp, Martin Rejzek, Jonatan U. Fangel, Kathirvel Alagesan, Daniel Kolarich, William G. T. Willats, Robert A. Field
Software Mentions: 1
Published: almost 7 years ago

10.1186/1479-5876-10-5

Identification and proteomic profiling of exosomes in human cerebrospinal fluid
Cited by: 366
Author(s): Jonathan M. Street, Perdita E. Barran, C. Logan Mackay, Stefan Weidt, Craig Balmforth, Tim Walsh, R. T. A. Chalmers, David J. Webb, James W. Dear
Software Mentions: 1
Published: almost 13 years ago

10.1155/2015/164846

Mass Spectrometry-Based Proteomic Study Makes High-Density Lipoprotein a Biomarker for Atherosclerotic Vascular Disease
Cited by: 13
Author(s): Chiz Tzung Chang, Chao Yang, Fuu Jen Tsai, Shih Yi Lin, Chao‐Jung Chen
Software Mentions: 1
Published: almost 10 years ago

10.3390/biomedicines8120547

Identification of Enzymes Oxidizing the Tyrosine Kinase Inhibitor Cabozantinib: Cabozantinib Is Predominantly Oxidized by CYP3A4 and Its Oxidation Is Stimulated by cyt b5 Activity
Cited by: 4
Author(s): Radek Indra, Katarína Vavrová, Petr Pompach, Zbyněk Heger, Petr Hodek
Software Mentions: 1
Published: almost 4 years ago

10.3390/biomedicines8100410

Glycosylation Alterations in Multiple Sclerosis Show Increased Proinflammatory Potential
Cited by: 23
Author(s): Ana Cvetko, Domagoj Kifer, Olga Gornik, Lucija Klarić, Elizabeth Visser, Gordan Lauc, James F. Wilson, Tamara Štambuk
Software Mentions: 1
Published: about 4 years ago

10.3390/biomedicines9091106

Targeting ErbB3 Receptor in Cancer with Inhibitory Antibodies from Llama
Cited by: 5
Author(s): Igor E. Eliseev, V. M. Ukrainskaya, Anna Yudenko, Anna D. Mikushina, Stanislav V. Shmakov, Anastasiya Isaevna Afremova, Viktoria M. Ekimova, Anna A. Vronskaia, Nickolay A. Knyazev, Olga Shamova
Software Mentions: 1
Published: about 3 years ago

10.3390/biom5031832

Complementary LC-MS/MS-Based N-Glycan, N-Glycopeptide, and Intact N-Glycoprotein Profiling Reveals Unconventional Asn71-Glycosylation of Human Neutrophil Cathepsin G
Cited by: 47
Author(s): Ian Loke, Nicolle H. Packer, Morten Thaysen‐Andersen
Software Mentions: 1
Published: over 9 years ago

10.3390/biom11010028

Anti-Inflammatory, Antioxidant, and Wound-Healing Properties of Cyanobacteria from Thermal Mud of Balaruc-Les-Bains, France: A Multi-Approach Study
Cited by: 18
Author(s): Justine Demay, Sébastien Halary, Adeline Knittel-Obrecht, Pascal Villa, Clément Duval, Sahima Hamlaoui, Théotime Roussel, Claude Yéprémian, Anita Reinhardt, Cécile Bernard, Benjamin Marie
Software Mentions: 1
Published: almost 4 years ago

10.3390/biom10121602

Sensing of Proteins by ICD Response of Iron(II) Clathrochelates Functionalized by Carboxyalkylsulfide Groups
Cited by: 9
Author(s): Mykhaylo Yu. Losytskyy, Nina V. Chornenka, Serhii Vakarov, Samuel M. Meier‐Menches, Christopher Gerner, Sławomir Potocki, Vladimir B. Arion, Elżbieta Gumienna‐Kontecka, Yan Z. Voloshin, Vladyslava Kovalska
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41598-021-89089-4

Association of urinary ketamine and APOA1 levels with bladder dysfunction in ketamine abusers revealed via proteomics and targeted metabolite analyses
Cited by: 3
Author(s): Jo-Chuan Liu, Yi-Ting Chen, Ya-Ju Hsieh, Chia‐Chun Wu, Ming‐Chyi Huang, Yu‐Chao Hsu, Chun–Te Wu, Chih‐Ken Chen, Srinivas Dash, Jau‐Song Yu
Software Mentions: 1
Published: over 3 years ago

10.3390/biom9110728

A Dynamic Core in Human NQO1 Controls the Functional and Stability Effects of Ligand Binding and Their Communication across the Enzyme Dimer
Cited by: 19
Author(s): Pavla Vaňková, Eduardo Salido, David J. Timson, Petr Man, Ángel L. Pey
Software Mentions: 1
Published: about 5 years ago

10.3390/biom10020242

Structural Dynamics of Lytic Polysaccharide Monooxygenase during Catalysis
Cited by: 11
Author(s): František Filandr, Daniel Kavan, Daniel Kracher, Christophe V. F. P. Laurent, Roland Ludwig, Petr Man, Petr Halada
Software Mentions: 1
Published: almost 5 years ago

10.1042/BSR20120110

A PPARγ ligand present in Actinidia fruit (Actinidia chrysantha) is identified as dilinolenoyl galactosyl glycerol
Cited by: 1
Author(s): Harry Martin, Tony K. McGhie, Rona C. M. Lunken
Software Mentions: 1
Published: over 11 years ago

10.1002/bit.27738

Media on‐demand: Continuous reconstitution of a chemically defined media directly from solids
Cited by: 4
Author(s): Daniel Komuczki, Gregory Dutra, Christoph Gstöttner, Elena Domínguez‐Vega, Alois Jungbauer, Peter Satzer
Software Mentions: 1
Published: over 3 years ago

10.1186/s12906-019-2758-3

ACE inhibitory peptides in standard and fermented deer velvet: an in silico and in vitro investigation
Cited by: 8
Author(s): Stephen R. Haines, Mark J. McCann, Anita J. Grosvenor, Ancy Thomas, Alasdair Noble, Stefan Clerens
Software Mentions: 1
Published: almost 5 years ago

10.1186/s13058-015-0544-9

Lectin RCA-I specifically binds to metastasis-associated cell surface glycans in triple-negative breast cancer
Cited by: 46
Author(s): Shu Zhou, Li Cheng, Shujuan Guo, Yang Wang, Daniel M. Czajkowsky, Huafang Gao, Xiaofang Hu, Sheng-Ce Tao
Software Mentions: 1
Published: over 9 years ago

10.1002/cam4.3439

Serum N‐Glycome analysis reveals pancreatic cancer disease signatures
Cited by: 19
Author(s): Gerda C M Vreeker, Randa G. Hanna-Sawires, Yassene Mohammed, Marco R. Bladergroen, Simone Nicolardi, Viktoria Dotz, Jan Nouta, Bert A. Bonsing, Wilma E. Mesker, Yuri E. M. van der Burgt, Manfred Wuhrer, Rob A.E.M. Tollenaar
Software Mentions: 1
Published: about 4 years ago

10.1186/1476-511X-12-48

PPARγ as a sensor of lipase activity and a target for the lipase inhibitor orlistat
Cited by: 8
Author(s): Harry Martin, Tony K. McGhie, Kerry L. Bentley‐Hewitt, John T. Christeller
Software Mentions: 1
Published: over 11 years ago

10.4161/mabs.26233

Production of stable bispecific IgG1 by controlled Fab-arm exchange
Cited by: 51
Author(s): Michael J. Gramer, Ewald T.J. van den Bremer, Muriel D. van Kampen, Atreyee Kundu, Peter Kopfmann, Éric Etter, David Stinehelfer, Justin Long, Tom Lannom, Esther H Noordergraaf, Jolanda Gerritsen, Aran F. Labrijn, Janine Schuurman, Patrick H.C. van Berkel, Paul W.H.I. Parren
Software Mentions: 1
Published: about 11 years ago

10.1186/s12936-017-2131-2

Identification of O-GlcNAcylated proteins in Plasmodium falciparum
Cited by: 20
Author(s): Mattis Kupferschmid, Moyira Osny Aquino-Gil, Hosam Shams‐Eldin, Jörg Schmidt, Nao Yamakawa, Frédéric Krzewinski, Ralph Τ. Schwarz, Tony Lefebvre
Software Mentions: 1
Published: almost 7 years ago

10.3390/md15100302

Metabolite Profiling of Triterpene Glycosides of the Far Eastern Sea Cucumber Eupentacta fraudatrix and Their Distribution in Various Body Components Using LC-ESI QTOF-MS
Cited by: 14
Author(s): Roman S. Popov, Natalia V. Ivanchina, Alexandra S. Silchenko, Sergey A. Avilov, Vladimir I. Kalinin, Igor Yu. Dolmatov, Valentin A. Stonik, Pavel S. Dmitrenok
Software Mentions: 1
Published: about 7 years ago

10.3390/md18060308

Exploring the Microalga Euglena cantabrica by Pressurized Liquid Extraction to Obtain Bioactive Compounds
Cited by: 5
Author(s): Nerea Muñoz‐Almagro, Bienvenida Gilbert-López, Pozuelo-Rollón M. Carmen, Yolanda García-Fernández, Carlos Almeida, Mar Villamiel, J. A. Mendiola, Elena Ibáñez
Software Mentions: 1
Published: over 4 years ago

10.3390/md17110616

Virescenosides From the Holothurian-Associated Fungus Acremonium Striatisporum Kmm 4401
Cited by: 7
Author(s): Olesya I. Zhuravleva, А. С. Антонов, G. K. Oleinikova, Yuliya V. Khudyakova, Roman S. Popov, В. А. Денисенко, Еvgeny А. Pislyagin, Ekaterina A. Chingizova, Shamil Sh. Afiyatullov
Software Mentions: 1
Published: about 5 years ago

10.3390/md17090523

The Distribution of Asterosaponins, Polyhydroxysteroids and Related Glycosides in Different Body Components of the Far Eastern Starfish Lethasterias fusca
Cited by: 8
Author(s): Roman S. Popov, Natalia V. Ivanchina, A. A. Kicha, Timofey V. Malyarenko, Boris B. Grebnev, Valentin A. Stonik, Pavel S. Dmitrenok
Software Mentions: 1
Published: about 5 years ago

10.3390/md17070395

Integrated Gas Chromatograph-Mass Spectrometry (GC/MS) and MS/MS-Based Molecular Networking Reveals the Analgesic and Anti-Inflammatory Phenotypes of the Sea Slater Ligia exotica
Cited by: 8
Author(s): Yue Yang, Quanbin Zhang, Jing Wang
Software Mentions: 1
Published: over 5 years ago

10.3390/md19020108

Chitin Degradation Machinery and Secondary Metabolite Profiles in the Marine Bacterium Pseudoalteromonas rubra S4059
Cited by: 12
Author(s): Xiyan Wang, Thomas Isbrandt, Mikael Lenz Strube, Sara Skøtt Paulsen, Maike Wennekers Nielsen, Yannick Buijs, Erwin M. Schoof, Thomas Ostenfeld Larsen, Lone Gram, Sheng-Da Zhang
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12896-015-0157-5

Isolation of Mal d 1 and Api g 1 - specific recombinant antibodies from mouse IgG Fab fragment libraries – Mal d 1-specific antibody exhibits cross-reactivity against Bet v 1
Cited by: 7
Author(s): Jaana Haka, Merja Niemi, Kristiina Iljin, Vanga Siva Reddy, Kristiina Takkinen, Marja−Leena Laukkanen
Software Mentions: 1
Published: over 9 years ago

10.3390/metabo9030046

Ozone and Wounding Stresses Differently Alter the Temporal Variation in Formylated Phloroglucinols in Eucalyptus globulus Leaves
Cited by: 9
Author(s): Bin Liu, Bruna Marques dos Santos, Arooran Kanagendran, Elizabeth Heather Jakobsen Neilson
Software Mentions: 1
Published: over 5 years ago

10.3390/metabo11070438

Metabolomic Approaches to Studying the Response to Drought Stress in Corn (Zea mays) Cobs
Cited by: 8
Author(s): Isabella Gaffney, J. Brett Sallach, Julie Wilson, Edmund T. Bergström, Jane Thomas‐Oates
Software Mentions: 1
Published: over 3 years ago

10.3390/metabo8040056

Metabolomics of Two Pecan Varieties Provides Insights into Scab Resistance
Cited by: 7
Author(s): Zhentian Lei, Clayton Kranawetter, Barbara W. Sumner, David V. Huhman, Daniel J. Wherritt, Andrew L. Thomas, Charles T. Rohla, Lloyd W. Sumner
Software Mentions: 1
Published: about 6 years ago

10.3390/metabo10010013

Generation of a Collision Cross Section Library for Multi-Dimensional Plant Metabolomics Using UHPLC-Trapped Ion Mobility-MS/MS
Cited by: 46
Author(s): Mark J. Schroeder, S. Meyer, Heino M. Heyman, Aiko Barsch, Lloyd W. Sumner
Software Mentions: 1
Published: almost 5 years ago

10.3390/metabo9110277

Evaluation of Dried Blood Spot Sampling for Clinical Metabolomics: Effects of Different Papers and Sample Storage Stability
Cited by: 31
Author(s): Oxana P. Trifonova, Dmitry L. Maslov, Elena E. Balashova, Petr G. Lokhov
Software Mentions: 1
Published: about 5 years ago

10.1186/1475-2891-10-52

Anti-inflammatory activity of edible oyster mushroom is mediated through the inhibition of NF-κB and AP-1 signaling
Cited by: 92
Author(s): Andrej Jedinak, Shailesh Dudhgaonkar, Qingli Wu, James H. Simon, Daniel Slíva
Software Mentions: 1
Published: over 13 years ago

10.1038/s41598-021-93839-9

Application across species of a one health approach to liquid sample handling for respiratory based -omics analysis
Cited by: 2
Author(s): Anna Eleonora Karagianni, Samantha L. Eaton, Dominic Kurian, Eugenio Cillán‐García, Jonathan Twynam-Perkins, Anna Raper, Thomas M. Wishart, Scott Pirie
Software Mentions: 1
Published: over 3 years ago

10.3390/metabo11080489

Rapid Identification of Common Secondary Metabolites of Medicinal Herbs Using High-Performance Liquid Chromatography with Evaporative Light Scattering Detector in Extracts
Cited by: 8
Author(s): Kiran Amir Ali, Asghar Ali, Muhammad Noman Khan, Saeedur Rahman, Shaheen Faizi, Muhammad Ali, Shaden A. M. Khalifa, Hesham R. El-Seedi, Syed Ghulam Musharraf
Software Mentions: 1
Published: over 3 years ago

10.3390/ijms22168844

Ganglioside Composition Distinguishes Anaplastic Ganglioglioma Tumor Tissue from Peritumoral Brain Tissue: Complementary Mass Spectrometry and Thin-Layer Chromatography Evidence
Cited by: 3
Author(s): Dragana Fabris, Ivana Karmelić, Hasan Muharemović, Tomislav Sajko, Mia Jurilj, Slavica Potočki, Ruđer Novak, Željka Vukelić
Software Mentions: 1
Published: over 3 years ago

10.1007/s11306-015-0926-0

Mass spectrometry imaging of amino neurotransmitters: a comparison of derivatization methods and application in mouse brain tissue
Cited by: 73
Author(s): Clara Esteve, Else A. Tolner, Reinald Shyti, Arn M. J. M. van den Maagdenberg, Liam A. McDonnell
Software Mentions: 1
Published: almost 9 years ago

10.1126/science.abc8378

Afucosylated IgG characterizes enveloped viral responses and correlates with COVID-19 severity
Cited by: 223
Author(s): Mads Delbo Larsen, Erik L. de Graaf, Myrthe E. Sonneveld, H. Rosina Plomp, Jan Nouta, Willianne Hoepel, Hung Jen Chen, Federica Linty, Remco Visser, Maximilian Brinkhaus, Tonći Šuštić, Steven W. de Taeye, Arthur E. H. Bentlage, Sanna Toivonen, Carolien A. M. Koeleman, Susanna Sainio, Neeltje A. Kootstra, Philip J.M. Brouwer, Chiara E. Geyer, Ninotska I. L. Derksen, Gertjan Wolbink, Menno P.J. de Winther, Rogier W. Sanders, Marit J. van Gils, Sanne de Bruin, Alexander P.J. Vlaar, Theo Rispens, Jeroen den Dunnen, Hans L. Zaaijer, Manfred Wuhrer, C. Ellen van der Schoot, Gestur Vidarsson, Michiel A. van Agtmael, Anne Geke Algera, Frank van Baarle, Diane Bax, Diederik van de Beek, Martijn Beudel, Harm Jan Bogaard, Peter I. Bonta, Marije Bomers, Lieuwe Bos, Michela Botta, Godelieve de Bree, Matthijs C. Brouwer, Justin de Brabander, Sanne de Bruin, Marianna Bugiani, Esther Bulle, Osoul Chouchane, Alex Cloherty, Paul Elbers, Lucas M. Fleuren, Suzanne E. Geerlings, Bart F. Geerts, T.B.H. Geijtenbeek, Armand R.J. Girbes, Abraham Goorhuis, Martin P. Grobusch, Florianne Hafkamp, Laura A. Hagens, Jörg Hamann, Vanessa Harris, Robert Hemke, Sabine Hermans, Leo Heunks, Markus W. Hollmann, Janneke Horn, Joppe W. Hovius, Menno D. de Jong, Rutger Koning, Niels van Mourik, Jeaninne Nellen, Esther J. Nossent, Frederique Paulus, Edgar J.G. Peters, Tom van der Poll, Bennedikt Preckel, Jan M. Prins, Jorinde Raasveld, T Rijnders, Michiel Schinkel, Marcus J. Schultz, Alex Schuurmans, Kim C.E. Sigaloff, Marry R. Smit, Cornelis Stijnis, Willemke Stilma, Charlotte E. Teunissen, Patrick Thoral, Anissa M. Tsonas, Marc van der Valk, Denise P. Veelo, Alexander P.J. Vlaar, Heder de Vries, Michèle van Vugt, W. Joost Wiersinga, Dorien Wouters, A. H. Zwinderman
Software Mentions: 1
Published: over 3 years ago

10.1100/2012/765909

Identification of Proteins with Potential Osteogenic Activity Present in the Water-Soluble Matrix Proteins fromCrassostrea gigasNacre Using a Proteomic Approach
Cited by: 22
Author(s): Daniel V. Oliveira, Tomé S. Silva, Odete Cordeiro, Sofia Cavaco, Dina C. Simes
Software Mentions: 1
Published: almost 13 years ago

10.3390/mps1010009

Method for the Routine Determination of Accurate Masses by Triple Quadrupole Mass Spectrometry
Cited by: 0
Author(s): Pedro A. Segura, Killian Barry, Emmanuel Eysseric, Shawn Gallagher‐Duval, Philippe Venne, Guillaume Bélanger
Software Mentions: 1
Published: almost 7 years ago

10.1111/1751-7915.13722

Phytoplankton trigger the production of cryptic metabolites in the marine actinobacterium Salinispora tropica
Cited by: 14
Author(s): Audam Chhun, Despoina Sousoni, Maria del Mar Aguiló-Ferretjans, Lijiang Song, Christophe Corre, Joseph Alexander Christie-Oleza
Software Mentions: 1
Published: almost 4 years ago

10.1186/1475-2859-12-31

Reconstruction of the biosynthetic pathway for the core fungal polyketide scaffold rubrofusarin in Saccharomyces cerevisiae
Cited by: 52
Author(s): Peter Rugbjerg, Michael Næsby, Uffe Hasbro Mortensen, Rasmus John Normand Frandsen
Software Mentions: 1
Published: over 11 years ago

10.1186/1475-2859-10-37

Overexpression of human virus surface glycoprotein precursors induces cytosolic unfolded protein response in Saccharomyces cerevisiae
Cited by: 19
Author(s): Evaldas Čiplys, Dhanraj Samuel, Mindaugas Juozapaitis, Kęstutis Sasnauskas, Rimantas Slibinskas
Software Mentions: 1
Published: over 13 years ago

10.1186/s12934-017-0758-x

Increasing on-target cleavage efficiency for CRISPR/Cas9-induced large fragment deletion in Myxococcus xanthus
Cited by: 18
Author(s): Yingjie Yang, Ye Wang, Zhifeng Li, Ya Gong, Peng Zhang, Wenchao Hu, Duohong Sheng, Yuezhong Li
Software Mentions: 1
Published: over 7 years ago

10.1186/s12934-020-01434-w

Comparative metabolomics of Phialemonium curvatum as an omnipotent fungus cultivated on crude palm oil versus glucose
Cited by: 2
Author(s): Arief Izzairy Zamani, Susann Barig, Sarah Ibrahim, Hirzun Mohd Yusof, Julia Ibrahim, Jaime Yoke Sum Low, Shwu Fun Kua, Syarul Nataqain Baharum, K.‐Peter Stahmann, Chyan Leong Ng
Software Mentions: 1
Published: about 4 years ago

10.1186/s12934-020-01495-x

Heterologous expression of the atypical tetracycline chelocardin reveals the full set of genes required for its biosynthesis
Cited by: 4
Author(s): Tadeja Lukežič, Špela Pikl, Nestor Zaburannyi, Maja Remškar, Hrvoje Petković, Rolf Müller
Software Mentions: 1
Published: almost 4 years ago

Projects: pypi: DataAnalysis

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