Projects: pypi: CIRIquant
https://packages.ecosyste.ms/registries/pypi.org/packages/CIRIquant
circular RNA quantification pipeline
6 versions
Latest release: over 5 years ago
73 downloads last month
Enhanced Analysis
Educational Contributors:
osagie@ebi.ac.uk
Repository Activity:
Repository Owner:
Fangqing Zhao's Lab (organization)
Genomics & Computational Biology Lab, Beijing Institutes of Life Science Academic
Genomics & Computational Biology Lab, Beijing Institutes of Life Science Academic
README Analysis:
DOI Found
Science Score: 100/100
Starting Score: 100 points
Bonuses:
-
+20
Educational commit emails
1 contributors with educational email addresses -
+20
Academic repository owner
Repository owned by academic institution -
+15
Institutional repository owner
Repository owned by research institution -
+2
Science terms in README
1 scientific terms found in README -
+30
DOI references
3 DOI references found in README
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem -
-15
No science keywords
No scientific terms found in keywords/classifiers -
-10
No science terms in description
No scientific terms found in description
Very Likely Science (100)
Papers Mentioning CIRIquant 6
10.1186/s12859-021-04211-7
RNAdetector: a free user-friendly stand-alone and cloud-based system for RNA-Seq data analysisCited by: 6
Author(s): Alessandro La Ferlita, Salvatore Alaimo, Sebastiano Di Bella, Emanuele Martorana, Georgios I. Laliotis, Francesco Bertoni, Luciano Cascione, Philip N. Tsichlis, Alfredo Ferro, Roberta Bosotti, Alfredo Pulvirenti
Software Mentions: 10
Published: about 5 years ago
10.3389/fgene.2021.665153
Comparative Analysis of the Circular Transcriptome in Muscle, Liver, and Testis in Three Livestock SpeciesCited by: 9
Author(s): Annie Robic, Chloé Cerutti, Christa Kühn, Thomas Faraut
Software Mentions: 6
Published: about 5 years ago
10.1186/s13100-021-00233-3
RIP-seq reveals LINE-1 ORF1p association with p-body enriched mRNAsCited by: 17
Author(s): Erica M. Briggs, Wilson McKerrow, Paolo Mita, Jef D. Boeke, Susan K. Logan, David Fenyö
Software Mentions: 3
Published: over 5 years ago
10.3390/cells9030659
circRNAs Signature as Potential Diagnostic and Prognostic Biomarker for Diabetes Mellitus and Related Cardiovascular ComplicationsCited by: 59
Author(s): Mohamed Zaiou
Software Mentions: 1
Published: over 6 years ago
10.3389/fgene.2020.628655
Circular RNAs Sparkle in the Diagnosis and Theranostics of Hepatocellular CarcinomaCited by: 4
Author(s): Menglan Wang, Minjie Wu, Tian Xie, Jianxiang Chen
Software Mentions: 1
Published: over 5 years ago
10.1186/s13059-020-02250-6
A novel protein encoded by circular SMO RNA is essential for Hedgehog signaling activation and glioblastoma tumorigenicityCited by: 91
Author(s): Xujia Wu, Shifu Xiao, Maolei Zhang, Lixuan Yang, Jian Zhong, Bo Li, Fanying Li, Xin Xia, Xixi Li, Huangkai Zhou, Dawei Liu, Nunu Huang, Xuesong Yang, Feizhe Xiao, Nu Zhang
Software Mentions: 1
Published: over 5 years ago