Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: CIRIquant

https://packages.ecosyste.ms/registries/pypi.org/packages/CIRIquant

circular RNA quantification pipeline
6 versions
Latest release: over 3 years ago
73 downloads last month

Papers Mentioning CIRIquant 6

10.1186/s12859-021-04211-7

RNAdetector: a free user-friendly stand-alone and cloud-based system for RNA-Seq data analysis
Cited by: 6
Author(s): Alessandro La Ferlita, Salvatore Alaimo, Sebastiano Di Bella, Emanuele Martorana, Georgios I. Laliotis, Francesco Bertoni, Luciano Cascione, Philip N. Tsichlis, Alfredo Ferro, Roberta Bosotti, Alfredo Pulvirenti
Software Mentions: 10
Published: over 3 years ago

10.3389/fgene.2021.665153

Comparative Analysis of the Circular Transcriptome in Muscle, Liver, and Testis in Three Livestock Species
Cited by: 9
Author(s): Annie Robic, Chloé Cerutti, Christa Kühn, Thomas Faraut
Software Mentions: 6
Published: over 3 years ago

10.1186/s13100-021-00233-3

RIP-seq reveals LINE-1 ORF1p association with p-body enriched mRNAs
Cited by: 17
Author(s): Erica M. Briggs, Wilson McKerrow, Paolo Mita, Jef D. Boeke, Susan K. Logan, David Fenyö
Software Mentions: 3
Published: over 3 years ago

10.3390/cells9030659

circRNAs Signature as Potential Diagnostic and Prognostic Biomarker for Diabetes Mellitus and Related Cardiovascular Complications
Cited by: 59
Author(s): Mohamed Zaiou
Software Mentions: 1
Published: over 4 years ago

10.3389/fgene.2020.628655

Circular RNAs Sparkle in the Diagnosis and Theranostics of Hepatocellular Carcinoma
Cited by: 4
Author(s): Menglan Wang, Minjie Wu, Tian Xie, Jianxiang Chen
Software Mentions: 1
Published: over 3 years ago

10.1186/s13059-020-02250-6

A novel protein encoded by circular SMO RNA is essential for Hedgehog signaling activation and glioblastoma tumorigenicity
Cited by: 91
Author(s): Xujia Wu, Shifu Xiao, Maolei Zhang, Lixuan Yang, Jian Zhong, Bo Li, Fanying Li, Xin Xia, Xixi Li, Huangkai Zhou, Dawei Liu, Nunu Huang, Xuesong Yang, Feizhe Xiao, Nu Zhang
Software Mentions: 1
Published: almost 4 years ago