Ecosyste.ms: Papers

10.1016/j.stem.2019.07.008

Defining the Identity and Dynamics of Adult Gastric Isthmus Stem Cells
Cited by: 85
Author(s): Seungmin Han, J. Lynn Fink, David J. Jörg, Eunmin Lee, Min Kyu Yum, Lemonia Chatzeli, Sebastian R. Merker, Manon Josserand, Teodora Trendafilova, Amanda Andersson-Rolf, Catherine Dabrowska, Hyunki Kim, Ronald Naumann, Ji–Hyun Lee, Nobuo Sasaki, Richard L. Mort, Onur Basak, Hans Clevers, Daniel E. Stange, Anna Philpott, Jong Kim, Benjamin D. Simons, Bon‐Kyoung Koo
Software Mentions: 17
Published: over 5 years ago

10.7554/eLife.67490

Non-linear dimensionality reduction on extracellular waveforms reveals cell type diversity in premotor cortex
Cited by: 27
Author(s): Eric Lee, Hymavathy Balasubramanian, Alexandra Tsolias, Stephanie Udochukwu Anakwe, Maria Medalla, Krishna V. Shenoy, Chandramouli Chandrasekaran
Software Mentions: 10
Published: over 3 years ago

10.1038/ismej.2017.197

Microbial life on a sand grain: from bulk sediment to single grains
Cited by: 79
Author(s): David Probandt, Thilo Eickhorst, Andreas Ellrott, Rudolf Amann, Katrin Knittel
Software Mentions: 7
Published: about 7 years ago

10.1038/s41380-020-0671-2

Inhibition of colony stimulating factor 1 receptor corrects maternal inflammation-induced microglial and synaptic dysfunction and behavioral abnormalities
Cited by: 36
Author(s): Seiko Ikezu, Hana Yeh, Jean-Christophe Delpech, Maya E. Woodbury, Alicia A. Van Enoo, Zhi Ruan, Sudhir Sivakumaran, Yang You, C. A. Holland, Teresa Guillamón-Vivancos, Asuka Yoshii-Kitahara, Mina Botros, Charlotte Madore, Pin-Hao Chao, Ankita Desani, Solaiappan Manimaran, Srinidhi Venkatesan Kalavai, W. Evan Johnson, Oleg Butovsky, Maria Medalla, Jennifer I. Luebke, Tsuneya Ikezu
Software Mentions: 5
Published: almost 5 years ago

10.3389/fncel.2017.00332

Heterogeneity of the Axon Initial Segment in Interneurons and Pyramidal Cells of Rodent Visual Cortex
Cited by: 54
Author(s): Felix Höfflin, Alexander Jack, Christian Riedel, Julia Angela Mack-Bucher, Johannes Roos, Corinna Corcelli, Christian Schultz, Petra Wahle, Maren Engelhardt
Software Mentions: 5
Published: about 7 years ago

10.1007/s00429-019-01888-8

Quantitative organization of the excitatory synapses of the primate cerebellar nuclei: further evidence for a specialized architecture underlying the primate cerebellum
Cited by: 0
Author(s): Haian Mao, Salah Hamodeh, Angelos Skodras, Fahad Sultan
Software Mentions: 4
Published: over 5 years ago

10.7554/eLife.55500

Viral-induced alternative splicing of host genes promotes influenza replication
Cited by: 38
Author(s): M. Thompson, Mark Dittmar, Michael J. Mallory, Prasanna Bhat, Max B Ferretti, Beatriz M. A. Fontoura, Sara Cherry, Kristen W. Lynch
Software Mentions: 3
Published: about 4 years ago

10.1038/s41598-018-19351-9

Visualization of human karyopherin beta-1/importin beta-1 interactions with protein partners in mitotic cells by co-immunoprecipitation and proximity ligation assays
Cited by: 13
Author(s): Laura Di Francesco, Annalisa Verrico, Italia Anna Asteriti, Paola Rovella, Pietro Cirigliano, Giulia Guarguaglini, Maria Eugenia Schininà, Patrizia Lavia
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.ppat.1008407

Chemical intervention of influenza virus mRNA nuclear export
Cited by: 10
Author(s): Matthew A. Esparza, Amir Mor, Hanspeter Niederstrasser, Kris M. White, Alexander D. White, Ke Zhang, Shengyan Gao, Juan Wang, Jue Liang, Sei Sho, Ramanavelan Sakthivel, Adwait Amod Sathe, Chao Xing, Raquel Muñoz-Moreno, Jerry W. Shay, Adolfo Garcı́a-Sastre, Joseph M. Ready, Bruce A. Posner, Beatriz M. A. Fontoura
Software Mentions: 3
Published: almost 5 years ago

10.1083/jcb.201702099

BAIAP3, a C2 domain–containing Munc13 protein, controls the fate of dense-core vesicles in neuroendocrine cells
Cited by: 44
Author(s): Xingmin Zhang, Shan Jiang, Kelly A. Mitok, Lingjun Li, Alan D. Attie, Thomas F.J. Martin
Software Mentions: 3
Published: over 7 years ago

10.3390/cancers12102842

(2R,3S)-Dihydroxybutanoic Acid Synthesis as a Novel Metabolic Function of Mutant Isocitrate Dehydrogenase 1 and 2 in Acute Myeloid Leukemia
Cited by: 6
Author(s): Jeffrey R. Idle, Katja Seipel, Ulrike Bacher, Thomas Pabst, Diren Beyoğlu
Software Mentions: 2
Published: over 4 years ago

10.1523/ENEURO.0020-14.2015

A Neuronal Activity-Dependent Dual Function Chromatin-Modifying Complex Regulates<i>Arc</i>Expression
Cited by: 26
Author(s): Nicodemus Edrick Oey, How Wing Leung, Rajaram Ezhilarasan, Lanlan Zhou, Roger W. Beuerman, Hendrika M.A. VanDongen, Antonius M.J. VanDongen
Software Mentions: 2
Published: almost 10 years ago

10.1371/journal.pone.0095113

Heterogeneous Intracellular Trafficking Dynamics of Brain-Derived Neurotrophic Factor Complexes in the Neuronal Soma Revealed by Single Quantum Dot Tracking
Cited by: 26
Author(s): Anke Vermehren-Schmaedick, Wesley D. Krueger, Thomas Jacob, Damien Ramunno-Johnson, Agnieszka Bałkowiec, Keith A. Lidke, Tania Q. Vu
Software Mentions: 2
Published: over 10 years ago

10.3390/cancers12061674

Inhibition of FGF2-Mediated Signaling in GIST—Promising Approach for Overcoming Resistance to Imatinib
Cited by: 7
Author(s): Sergei Boichuk, Aigul Galembikova, Ekaterina Mikheeva, Firuza Bikinieva, Aida Aukhadieva, Pavel Dunaev, Dinar Khalikov, Semen Petrov, Refat Kurtasanov, Elena V. Valeeva, Igor I. Kireev, Vera B. Dugina, А. А. Лушникова, М. В. Новикова, Pavel Kopnin
Software Mentions: 2
Published: over 4 years ago

10.1186/s13063-016-1388-z

Danish study of Non-Invasive testing in Coronary Artery Disease (Dan-NICAD): study protocol for a randomised controlled trial
Cited by: 41
Author(s): Louise Nissen, Simon Winther, Christin Isaksen, June Anita Ejlersen, Lau Brix, Gražina Urbonavičienė, Lars Frost, Lene Helleskov Madsen, Lars Knudsen, Samuel Schmidt, Niels Ramsing Holm, Michael Mæng, Mette Nyegaard, Hans Erik Bøtker, Morten Bøttcher
Software Mentions: 2
Published: over 8 years ago

10.7554/eLife.40818

Mutant huntingtin enhances activation of dendritic Kv4 K+ channels in striatal spiny projection neurons
Cited by: 23
Author(s): Luis Carrillo-Reid, Michelle Day, Zhong Xie, Alexandria E Melendez, Jyothisri Kondapalli, Joshua L. Plotkin, David L. Wokosin, Yu Chen, Geraldine J. Kress, Michael G. Kaplitt, Ema Ilijić, Josefina Guzmán, C. Savio Chan, D. James Surmeier
Software Mentions: 2
Published: over 5 years ago

10.3390/cells10020397

DVDeconv: An Open-Source MATLAB Toolbox for Depth-Variant Asymmetric Deconvolution of Fluorescence Micrographs
Cited by: 2
Author(s): Boyoung Kim
Software Mentions: 2
Published: almost 4 years ago

10.1186/1741-7007-11-114

The p53 response in single cells is linearly correlated to the number of DNA breaks without a distinct threshold
Cited by: 65
Author(s): Alexander Loewer, Ketki Karanam, Charles Mock, Galit Lahav
Software Mentions: 2
Published: about 11 years ago

10.7554/eLife.03895

Drep-2 is a novel synaptic protein important for learning and memory
Cited by: 38
Author(s): Till F. M. Andlauer, Sabrina Scholz-Kornehl, Rui Tian, Marieluise Kirchner, Husam Babikir, Harald Depner, Bernhard Loll, Christine Quentin, Varun Gupta, Matthew Holt, Shubham Dipt, Michael Cressy, Markus C. Wahl, André Fiala, Matthias Selbach, Martin Schwärzel, Stephan J. Sigrist
Software Mentions: 2
Published: about 10 years ago

10.7717/peerj.1624

The metabolomic profile of gamma-irradiated human hepatoma and muscle cells reveals metabolic changes consistent with the Warburg effect
Cited by: 16
Author(s): Min Wang, Adrian Keogh, Susan Treves, Jeffrey R. Idle, Diren Beyoğlu
Software Mentions: 2
Published: almost 9 years ago

10.3390/metabo7020023

A Novel Anti-Hepatitis C Virus and Antiproliferative Agent Alters Metabolic Networks in HepG2 and Hep3B Cells
Cited by: 9
Author(s): Adrian Keogh, Sevil Şenkardeş, Jeffrey R. Idle, Ş. Güniz Küçükgüzel, Diren Beyoğlu
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pgen.1006986

Interplay between microtubule bundling and sorting factors ensures acentriolar spindle stability during C. elegans oocyte meiosis
Cited by: 37
Author(s): Timothy J. Mullen, Sarah M. Wignall
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-018-22193-0

PDE4D regulates Spine Plasticity and Memory in the Retrosplenial Cortex
Cited by: 11
Author(s): Karsten Baumgärtel, Andrea Green, Diana Hornberger, Jennifer Lapira, Christopher S. Rex, Damian G. Wheeler, Marco Peters
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pgen.1005692

The lncRNA RZE1 Controls Cryptococcal Morphological Transition
Cited by: 46
Author(s): Nadia Chacko, Youbao Zhao, Ence Yang, Linqi Wang, James J. Cai, Xiaorong Lin
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pgen.1005514

Basolateral Endocytic Recycling Requires RAB-10 and AMPH-1 Mediated Recruitment of RAB-5 GAP TBC-2 to Endosomes
Cited by: 28
Author(s): Ou Liu, Barth D. Grant
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pgen.1005562

Regulation of Clostridium difficile Spore Formation by the SpoIIQ and SpoIIIA Proteins
Cited by: 47
Author(s): Kelly A. Fimlaid, Ole T. Jensen, M. Lauren Donnelly, M. Sloan Siegrist, Aimee Shen
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pgen.1005140

Spatio-temporal Remodeling of Functional Membrane Microdomains Organizes the Signaling Networks of a Bacterium
Cited by: 40
Author(s): Johannes Schneider, Teresa Klein, Benjamin Mielich-Süß, Guillaume Koch, Christian Franke, Oscar P. Kuipers, Ákos T. Kovács, Markus Sauer, Daniel López
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0099939

Mechanisms of U87 Astrocytoma Cell Uptake and Trafficking of Monomeric versus Protofibril Alzheimer’s Disease Amyloid-β Proteins
Cited by: 37
Author(s): Yali Li, Deshu Cheng, Ran Cheng, Xinyu Zhu, Tao Wan, Jian‐Miao Liu, Rongying Zhang
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0074169

PKC Activation in Niemann Pick C1 Cells Restores Subcellular Cholesterol Transport
Cited by: 20
Author(s): Farshad Tamari, Fannie W. Chen, Chunlei Li, Jagrutiben Chaudhari, Yiannis A. Ioannou
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0156893

A Bispecific Antibody Promotes Aggregation of Ricin Toxin on Cell Surfaces and Alters Dynamics of Toxin Internalization and Trafficking
Cited by: 23
Author(s): Cristina Herrera, Tove Irene Klokk, Richard W. Cole, Kirsten Sandvig, Nicholas J. Mantis
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0136732

Distinct Actin and Lipid Binding Sites in Ysc84 Are Required during Early Stages of Yeast Endocytosis
Cited by: 9
Author(s): Agnieszka Urbanek, Ellen G. Allwood, Adam P. Smith, Wesley I. Booth, Kathryn R. Ayscough
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0081331

The Drosophila gypsy Insulator Supports Transvection in the Presence of the vestigial Enhancer
Cited by: 11
Author(s): Todd A. Schoborg, Srilalitha Kuruganti, Ryan Rickels, Mariano Labrador
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0036137

Nuclear Distributions of NUP62 and NUP214 Suggest Architectural Diversity and Spatial Patterning among Nuclear Pore Complexes
Cited by: 25
Author(s): Yayoi Kinoshita, Tamara Kalir, Peter Dottino, D. Stave Kohtz
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0015878

The C-Terminal TDP-43 Fragments Have a High Aggregation Propensity and Harm Neurons by a Dominant-Negative Mechanism
Cited by: 157
Author(s): Chunxing Yang, Weijia Tan, Catheryne Whittle, Linghua Qiu, L. C. Cao, Schahram Akbarian, Zuoshang Xu
Software Mentions: 1
Published: about 14 years ago

10.1371/journal.pone.0019036

Development of a High-Throughput Candida albicans Biofilm Chip
Cited by: 37
Author(s): Anand Srinivasan, Priya Uppuluri, José L. Lopez-Ribot, Anand K. Ramasubramanian
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0075113

ß1 Integrin Binding Phosphorylates Ezrin at T567 to Activate a Lipid Raft Signalsome Driving Invadopodia Activity and Invasion
Cited by: 31
Author(s): Ester Antelmi, Rosa Angela Cardone, Maria Raffaella Greco, Rosa Rubino, Francesca Di Sole, Nicola Antonio Martino, Valeria Casavola, M. L. Carcangiu, Loredana Moro, Stephan J. Reshkin
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0001756

Screen for Localized Proteins in Caulobacter crescentus
Cited by: 10
Author(s): Jay H. Russell, Kenneth C. Keiler
Software Mentions: 1
Published: almost 17 years ago

10.1371/journal.pone.0101365

Automated Quantification and Integrative Analysis of 2D and 3D Mitochondrial Shape and Network Properties
Cited by: 56
Author(s): Julie Nikolaisen, Linn Iren Hodneland Nilsson, Ina Katrine Nitschke Pettersen, Peter H.G.M. Willems, James B. Lorens, Werner J.H. Koopman, Karl Johan Tronstad
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0063843

Septins Are Important for Cell Polarity, Septation and Asexual Spore Formation in Neurospora crassa and Show Different Patterns of Localisation at Germ Tube Tips
Cited by: 42
Author(s): Adokiye Berepiki, Nick D. Read
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0073928

Characterization of the Structural and Functional Determinants of MANF/CDNF in Drosophila In Vivo Model
Cited by: 37
Author(s): Riitta Lindström, Päivi Lindholm, Jukka Kallijärvi, Li-Ying Yu, Petteri Piepponen, Urmas Arumäe, Märt Saarma, Tapio I. Heino
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0053702

Integrin-Linked Kinase Regulates Interphase and Mitotic Microtubule Dynamics
Cited by: 15
Author(s): Siew Lan Lim, Eiko Kawamura, Andrew B. Fielding, Mykola Maydan, Shoukat Dedhar
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0001573

The Extracytoplasmic Stress Factor, σE, Is Required to Maintain Cell Envelope Integrity in Escherichia coli
Cited by: 131
Author(s): Jennifer Hayden, Sarah E. Ades
Software Mentions: 1
Published: almost 17 years ago

10.1371/journal.pone.0012415

The Bacterium Endosymbiont of Crithidia deanei Undergoes Coordinated Division with the Host Cell Nucleus
Cited by: 36
Author(s): María Cristina M. Motta, Carolina Moura Costa Catta-Preta, Sérgio Schenkman, Allan Cézar de Azevedo Martins, Kildare Miranda, Wanderley de Souza, Maria Carolina Elias
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0234394

Structural and functional features of medium spiny neurons in the BACHDΔN17 mouse model of Huntington’s Disease
Cited by: 2
Author(s): Joseph W. Goodliffe, Anastasia Rubakovic, Wayne Chang, Dhruba Pathak, Jennifer I. Luebke
Software Mentions: 1
Published: over 4 years ago

10.3390/cancers13051043

Reduced USP22 Expression Impairs Mitotic Removal of H2B Monoubiquitination, Alters Chromatin Compaction and Induces Chromosome Instability That May Promote Oncogenesis
Cited by: 6
Author(s): Lucile M. Jeusset, Brent J. Guppy, Zelda Lichtensztejn, Darin McDonald, Kirk J. McManus
Software Mentions: 1
Published: almost 4 years ago

10.3390/cells8101199

Defective Excitatory/Inhibitory Synaptic Balance and Increased Neuron Apoptosis in a Zebrafish Model of Dravet Syndrome
Cited by: 26
Author(s): Alexandre Brenet, Rahma Hassan-Abdi, Julie Somkhit, Constantin Yanicostas, Nadia Soussi-Yanicostas
Software Mentions: 1
Published: about 5 years ago

10.1038/s42003-020-01567-z

Post-correlation on-lamella cryo-CLEM reveals the membrane architecture of lamellar bodies
Cited by: 29
Author(s): Steffen Klein, Benedikt Wimmer, Sophie L. Winter, Androniki Kolovou, Vibor Laketa, Petr Chlanda
Software Mentions: 1
Published: almost 4 years ago

10.1242/dev.171512

Generating intravital super-resolution movies with conventional microscopy reveals actin dynamics that construct pioneer axons
Cited by: 8
Author(s): Yide Zhang, Evan L. Nichols, Abigail M. Zellmer, Ian H. Guldner, Cody Kankel, Siyuan Zhang, Scott S. Howard, Cody J. Smith
Software Mentions: 1
Published: almost 6 years ago

10.1186/s40658-014-0105-9

Evaluation of inter-departmental variability of ejection fraction and cardiac volumes in myocardial perfusion scintigraphy using simulated data
Cited by: 6
Author(s): Elin Trägårdh, Michael Ljungberg, Lars Edenbrandt, Eva Örndahl, Lena Johansson, Agnetha Gustafsson, Cathrine Jonsson, Jessica Hagerman, Katrine Riklund, David Minarik
Software Mentions: 1
Published: almost 10 years ago

10.3389/fcimb.2016.00090

Unique Footprint in the scl1.3 Locus Affects Adhesion and Biofilm Formation of the Invasive M3-Type Group A Streptococcus
Cited by: 10
Author(s): Beth A. Bachert, Soo Jeon Choi, P. Rocco LaSala, Tiffany Harper, Dudley H McNitt, Dylan T. Boehm, Clayton C. Caswell, Paweł Ciborowski, Douglas R. Keene, Anthony R. Flores, James M. Musser, Flavia Squeglia, Daniela Marasco, Rita Berisio, Sławomir Łukomski
Software Mentions: 1
Published: over 8 years ago

10.3389/fncel.2018.00246

Region-Specific Reductions in Morphometric Properties and Synaptic Colocalization of Astrocytes Following Cocaine Self-Administration and Extinction
Cited by: 34
Author(s): Anze Testen, Marian T. Sepulveda-Orengo, Christiann H. Gaines, Kathryn J. Reissner
Software Mentions: 1
Published: over 6 years ago

10.3389/fncel.2019.00032

Delayed Spine Pruning of Direct Pathway Spiny Projection Neurons in a Mouse Model of Parkinson’s Disease
Cited by: 32
Author(s): Steven M. Graves, D. James Surmeier
Software Mentions: 1
Published: almost 6 years ago

10.3389/fimmu.2021.620734

Pathogenic Stress Induces Human Monocyte to Express an Extracellular Web of Tunneling Nanotubes
Cited by: 5
Author(s): Michal Shahar, Auryan Szalat, Haim Rosen
Software Mentions: 1
Published: almost 4 years ago

10.3389/fimmu.2021.668483

Capturing T Lymphocytes’ Dynamic Interactions With Human Neural Cells Using Time-Lapse Microscopy
Cited by: 8
Author(s): Florent Lemaître, Ana Carmena Moratalla, Negar Farzam‐kia, Yves Carpentier Solorio, Olivier Tastet, Aurélie Cleret-Buhot, Jean Guimond, Élie Haddad, Nathalie Arbour
Software Mentions: 1
Published: over 3 years ago

10.3389/fmicb.2015.00520

Endosymbiosis in trypanosomatid protozoa: the bacterium division is controlled during the host cell cycle
Cited by: 29
Author(s): Carolina Moura Costa Catta-Preta, Felipe L. Brum, Camila C. da Silva, Aline Araújo Zuma, Maria Carolina Elias, Wanderley de Souza, Sérgio Schenkman, María Cristina M. Motta
Software Mentions: 1
Published: over 9 years ago

10.3389/fnmol.2016.00042

Adenosine Kinase Inhibition Protects against Cranial Radiation-Induced Cognitive Dysfunction
Cited by: 22
Author(s): Munjal M. Acharya, Janet E. Baulch, Theresa A. Lusardi, Barrett D. Allen, Nicole N. Chmielewski, Al Anoud D. Baddour, Charles L. Limoli, Detlev Boison
Software Mentions: 1
Published: over 8 years ago

10.3389/fphar.2021.656561

The CNS-Penetrant Soluble Guanylate Cyclase Stimulator CY6463 Reveals its Therapeutic Potential in Neurodegenerative Diseases
Cited by: 19
Author(s): Susana Correia, Rajesh Iyengar, Peter Germano, Kim San Tang, Sylvie G. Bernier, Chad D. Schwartzkopf, Jenny Tobin, Thomas W.-H. Lee, Guang Liu, Sarah Jacobson, Andrew Carvalho, Glen R. Rennie, Joon Jung, Paul A. Renhowe, Elisabeth Lonie, Christopher J. Winrow, John R. Hadcock, Juli E. Jones, Mark G. Currie
Software Mentions: 1
Published: over 3 years ago

10.3389/fphar.2015.00028

Homer2 deletion alters dendritic spine morphology but not alcohol-associated adaptations in GluN2B-containing N-methyl-D-aspartate receptors in the nucleus accumbens
Cited by: 11
Author(s): Natalie S. McGuier, Audrey E. Padula, Patrick J. Mulholland, L. Judson Chandler
Software Mentions: 1
Published: almost 10 years ago

10.3389/fpls.2014.00062

Localization of Daucus carota NMCP1 to the nuclear periphery: the role of the N-terminal region and an NLS-linked sequence motif, RYNLRR, in the tail domain
Cited by: 13
Author(s): Yuta Kimura, Kazuo Fujino, Kana Ogawa, Kiyoshi Masuda
Software Mentions: 1
Published: almost 11 years ago

10.3389/fnsyn.2015.00006

Compartmental distribution of GABAB receptor-mediated currents along the somatodendritic axis of hippocampal principal cells
Cited by: 30
Author(s): Claudius E. Degro, Ákos Kulik, Sam A. Booker, Imre Vida
Software Mentions: 1
Published: almost 10 years ago

10.1172/jci.insight.133488

Repeated hypoglycemia remodels neural inputs and disrupts mitochondrial function to blunt glucose-inhibited GHRH neuron responsiveness
Cited by: 4
Author(s): Mitchell Bayne, Alexandra Alvarsson, Kavya Devarakonda, Rosemary Li, Maria Jiménez-González, Darline Garibay, Kaetlyn Conner, Merina Varghese, Madhavika N. Serasinghe, Jerry E. Chipuk, Patrick R. Hof, Sarah A. Stanley
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.ppat.1002703

The Ubiquitin/Proteasome System Mediates Entry and Endosomal Trafficking of Kaposi's Sarcoma-Associated Herpesvirus in Endothelial Cells
Cited by: 42
Author(s): Whitney Greene, Wei Zhang, Maoxia He, Colleen M. Witt, Fengchun Ye, Shou‐Jiang Gao
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.ppat.1002833

Human Papillomavirus Type 8 Interferes with a Novel C/EBPβ-Mediated Mechanism of Keratinocyte CCL20 Chemokine Expression and Langerhans Cell Migration
Cited by: 70
Author(s): Tanya Sperling, Monika Ołdak, Barbara Walch‐Rückheim, Claudia Wickenhauser, Doorbar John, Herbert Pfister, Magdalena Malejczyk, Sławomir Majewski, Andrew C. Keates, Sigrun Smola
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.ppat.1006316

A role for glycolipid biosynthesis in severe fever with thrombocytopenia syndrome virus entry
Cited by: 32
Author(s): Mary Jane Drake, Benjamin Brennan, Kenneth Briley, Stephen M. Bart, Eric A. Sherman, Agnieszka M. Szemiel, Minutillo Madeleine, Frederic D. Bushman, Paul Bates
Software Mentions: 1
Published: over 7 years ago

10.1007/s13238-017-0461-z

Inhibition of retroviral Gag assembly by non-silencing miRNAs promotes autophagic viral degradation
Cited by: 7
Author(s): Na Qu, Zhao Ma, Mengrao Zhang, Muaz Nik Rushdi, Christopher J. Krueger, Antony K. Chen
Software Mentions: 1
Published: over 7 years ago

10.1186/s12953-015-0069-2

Differential effects of dopamine signalling on long-term memory formation and consolidation in rodent brain
Cited by: 17
Author(s): Nicole Reichenbach, Ulrike Herrmann, Thilo Kähne, Horst Schicknick, Rainer Pielot, Michael Naumann, Daniela C. Dieterich, Eckart D. Gundelfinger, Karl‐Heinz Smalla, Wolfgang Tischmeyer
Software Mentions: 1
Published: almost 10 years ago

10.1038/srep11408

Unraveling a molecular determinant for clathrin-independent internalization of the M2 muscarinic acetylcholine receptor
Cited by: 12
Author(s): Min Wan, Wenhua Zhang, Yangli Tian, Chanjuan Xu, Tao Xu, Jianfeng Liu, Rongying Zhang
Software Mentions: 1
Published: over 9 years ago

10.1038/srep12446

A Novel Intravital Imaging Window for Longitudinal Microscopy of the Mouse Ovary
Cited by: 46
Author(s): Filip Bochner, Liat Fellus-Alyagor, Vyacheslav Kalchenko, Shiri Shinar, Michal Neeman
Software Mentions: 1
Published: over 9 years ago

10.1038/srep17655

Sec13 Regulates Expression of Specific Immune Factors Involved in Inflammation In Vivo
Cited by: 20
Author(s): Thaís Garcias Moreira, Liang Zhang, Lihi Shaulov, Amnon Harel, Sharon K. Kuss, J. L. Williams, John M. Shelton, Bandarigoda N. Somatilaka, Joachim Seemann, Jue Yang, Ramanavelan Sakthivel, Daniel R. Nussenzveig, Ana Maria Caetano Faria, Beatriz M. A. Fontoura
Software Mentions: 1
Published: about 9 years ago

10.1038/srep31545

Elimination of microglia improves cognitive function following cranial irradiation
Cited by: 183
Author(s): Munjal M. Acharya, Kim N. Green, Barrett D. Allen, Allison R. Najafi, Amber R. Syage, Harutyun Minasyan, Mi T. Le, Takumi Kawashita, Erich Giedzinski, Vipan K. Parihar, Brian L. West, Janet E. Baulch, Charles L. Limoli
Software Mentions: 1
Published: over 8 years ago

10.1038/srep41560

Fluorescence circadian imaging reveals a PDF-dependent transcriptional regulation of the Drosophila molecular clock
Cited by: 17
Author(s): Virginie Sabado, Ludovic Vienne, José Manuel Nunes, Michael Rosbash, Emi Nagoshi
Software Mentions: 1
Published: almost 8 years ago

10.1038/srep42885

Epigenetic determinants of space radiation-induced cognitive dysfunction
Cited by: 47
Author(s): Munjal M. Acharya, Al Anoud D. Baddour, Takumi Kawashita, Barrett D. Allen, Amber R. Syage, Thuan Nguyen, Nicole Yoon, Erich Giedzinski, Liping Yu, Vipan K. Parihar, Janet E. Baulch
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-017-09495-5

Subcellular domain-dependent molecular hierarchy of SFK and FAK in mechanotransduction and cytokine signaling
Cited by: 9
Author(s): Qiaoqiao Wan, ThucNhi TruongVo, Hannah E. Steele, Altuğ Özçelikkale, Bumsoo Han, Yingxiao Wang, Junghwan Oh, Hiroki Yokota, Sungsoo Na
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-14484-9

Fluorescence-based cell-specific detection for laser-capture microdissection in human brain
Cited by: 16
Author(s): Brad R. Rocco, Heung Bum Oh, Rammohan Shukla, Naguib Mechawar, Etienne Sibille
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-017-15028-x

Multiple Behavior Phenotypes of the Fragile-X Syndrome Mouse Model Respond to Chronic Inhibition of Phosphodiesterase-4D (PDE4D)
Cited by: 42
Author(s): Mark E. Gurney, Patricia Cogram, Robert M. J. Deacon, Christopher S. Rex, Michael R. Tranfaglia
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-018-23259-9

Identification of di-substituted ureas that prevent growth of trypanosomes through inhibition of translation initiation
Cited by: 4
Author(s): Fabricio Machado, Caio Haddad Franco, Jose Vitorino dos Santos Neto, Karina Luiza Dias Teixeira, Carolina Borsoi Moraes, Ulisses Gazos Lopes, Bertal H. Aktas, Sérgio Schenkman
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-019-50415-6

Characterization of three TRAPPC11 variants suggests a critical role for the extreme carboxy terminus of the protein
Cited by: 7
Author(s): Miroslav P. Milev, Daniela Stanga, Anne Schänzer, A. Nascimento, Djenann Saint‐Dic, C. Ortez, Daniel Natera-de Benito, Desiré González Barrios, J. Colomer, Carmen Badosa, Cristina Jou, P. Gallano, Lidia Gonzalez‐Quereda, Ana Töpf, Katherine Johnson, Volker Straub, Andreas Hahn, Michael Sacher, Cecilia Jiménez‐Mallebrera
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-58989-2

PSD-95 Serine 73 phosphorylation is not required for induction of NMDA-LTD
Cited by: 8
Author(s): Agata Nowacka, Małgorzata Borczyk, Ahmad Salamian, T. Wójtowicz, Jakub Włodarczyk, Kasia Radwańska
Software Mentions: 1
Published: almost 5 years ago

10.1186/scrt411

Human adipose-derived stem cell transplantation as a potential therapy for collagen VI-related congenital muscular dystrophy
Cited by: 43
Author(s): Vitali Alexeev, Machiko Arita, Adele Donahue, Paolo Bonaldo, Mon‐Li Chu, Olga Igoucheva
Software Mentions: 1
Published: almost 11 years ago

10.1186/s13287-016-0388-y

Chemotaxis-driven disease-site targeting of therapeutic adult stem cells in dystrophic epidermolysis bullosa
Cited by: 7
Author(s): Vitali Alexeev, Adele Donahue, Jouni Uitto, Olga Igoucheva
Software Mentions: 1
Published: over 8 years ago

10.1155/2012/947381

Allelic Expression of Drosophila Protamines during Spermatogenesis
Cited by: 2
Author(s): Rachelle L. Kanippayoor, Amanda J. Moehring
Software Mentions: 1
Published: over 12 years ago

10.7554/eLife.07871

Distinct roles of NMDA receptors at different stages of granule cell development in the adult brain
Cited by: 23
Author(s): Yangling Mu, Chen Zhao, Nicolas Toni, Jun Yao, Fred H. Gage
Software Mentions: 1
Published: about 9 years ago

10.7554/eLife.06126

Generation of contractile actomyosin bundles depends on mechanosensitive actin filament assembly and disassembly
Cited by: 114
Author(s): Sari Tojkander, Gergana Gateva, Amjad Husain, Ramaswamy Krishnan, Pekka Lappalainen
Software Mentions: 1
Published: about 9 years ago

10.7554/eLife.05491

The Ret receptor regulates sensory neuron dendrite growth and integrin mediated adhesion
Cited by: 37
Author(s): Peter Soba, Chun Han, Yi Zheng, Daniel Perea, Irene Miguel-Aliaga, Yuh Nung Jan
Software Mentions: 1
Published: almost 10 years ago

10.3390/ijms22042162

Integrin-Linked Kinase Links Integrin Activation to Invadopodia Function and Invasion via the p(T567)-Ezrin/NHERF1/NHE1 Pathway
Cited by: 8
Author(s): Maria Raffaella Greco, Loredana Moro, Stefania Forciniti, Khalid O. Alfarouk, Stefania Cannone, Rosa Angela Cardone, Stephan J. Reshkin
Software Mentions: 1
Published: almost 4 years ago

10.3390/ijms22073668

Chronic Low Dose Neutron Exposure Results in Altered Neurotransmission Properties of the Hippocampus-Prefrontal Cortex Axis in Both Mice and Rats
Cited by: 13
Author(s): Balaji Krishnan, Chandramouli Natarajan, Krystyn Z. Bourne, Leila Alikhani, Juan Wang, Allison Sowa, Katherine Groen, Bayley Perry, Dara L. Dickstein, Janet E. Baulch, Charles L. Limoli, Richard A. Britten
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12974-020-01790-9

Mitigation of helium irradiation-induced brain injury by microglia depletion
Cited by: 30
Author(s): Barrett D. Allen, Amber R. Syage, Mattia Maroso, Al Anoud D. Baddour, Valerie Luong, Harutyun Minasyan, Erich Giedzinski, Brian L. West, Iván Soltész, Charles L. Limoli, Janet E. Baulch, Munjal M. Acharya
Software Mentions: 1
Published: over 4 years ago

10.18632/oncotarget.12236

Interaction of microtubules with the actin cytoskeleton via cross-talk of EB1-containing +TIPs and γ-actin in epithelial cells
Cited by: 31
Author(s): Vera B. Dugina, Irina B. Alieva, N. Khromova, Igor I. Kireev, Peter W. Gunning, Pavel Kopnin
Software Mentions: 1
Published: over 8 years ago

10.3791/2017

Human T Lymphocyte Isolation, Culture and Analysis of Migration &lt;em&gt;In Vitro&lt;/em&gt;
Cited by: 14
Author(s): Craig T. Lefort, Min‐Soo Kim
Software Mentions: 1
Published: over 14 years ago

10.1155/2017/3064016

Increased Mitochondrial Mass and Cytosolic Redox Imbalance in Hippocampal Astrocytes of a Mouse Model of Rett Syndrome: Subcellular Changes Revealed by Ratiometric Imaging of JC-1 and roGFP1 Fluorescence
Cited by: 28
Author(s): Dörthe Friederike Bebensee, Karolina Can, Michael Müller
Software Mentions: 1
Published: almost 8 years ago

10.1155/2020/8956504

Mitochondrial Dysfunctions May Be One of the Major Causative Factors Underlying Detrimental Effects of Benzalkonium Chloride
Cited by: 17
Author(s): Anton G. Rogov, Tatyana N. Goleva, E. I. Sukhanova, Khoren K. Epremyan, Tatiana A. Trendeleva, Alexandra P. Ovchenkova, D. A. Aliverdieva, R. A. Zvyagilskaya
Software Mentions: 1
Published: almost 5 years ago

10.1523/ENEURO.0022-15.2015

Optimization of CLARITY for Clearing Whole-Brain and Other Intact Organs
Cited by: 101
Author(s): Jonathan R. Epp, Yosuke Niibori, Hwa Lin Liz Hsiang, Valentina Mercaldo, Karl Deisseroth, Sheena A. Josselyn, Paul W. Frankland
Software Mentions: 1
Published: over 9 years ago

10.1523/ENEURO.0091-15.2015

AMPA Receptor Phosphorylation and Synaptic Colocalization on Motor Neurons Drive Maladaptive Plasticity below Complete Spinal Cord Injury
Cited by: 24
Author(s): J. Russell Huie, Ellen D. Stück, Kuan H. Lee, Karen‐Amanda Irvine, Michael S. Beattie, Jacqueline C. Bresnahan, James W. Grau, Adam R. Ferguson
Software Mentions: 1
Published: over 9 years ago

10.1523/ENEURO.0370-17.2018

AhR Deletion Promotes Aberrant Morphogenesis and Synaptic Activity of Adult-Generated Granule Neurons and Impairs Hippocampus-Dependent Memory
Cited by: 21
Author(s): Juana González Parra, María Isabel Cuartero, Alberto Pérez-Ruíz, Alicia García‐Culebras, Ricardo Martín, José Sánchez‐Prieto, Juan M. García‐Segura, Ignacio Lizasoaín, Marı́a A. Moro
Software Mentions: 1
Published: over 6 years ago

10.1007/s00401-017-1804-9

BACE1 inhibition more effectively suppresses initiation than progression of β-amyloid pathology
Cited by: 62
Author(s): Finn Peters, Hazal Salihoglu, Eva Ferreira Rodrigues, Étienne Herzog, Tanja Blume, Severin Filser, Mario M. Dorostkar, Derya R. Shimshek, Nils Brose, Ulf Neumann, Jochen Herms
Software Mentions: 1
Published: almost 7 years ago

10.3390/nu13020617

Upregulation of Vitamin C Transporter Functional Expression in 5xFAD Mouse Intestine
Cited by: 2
Author(s): Trevor Teafatiller, Christopher W. Heskett, Anshu Agrawal, Jonathan S. Marchant, Janet E. Baulch, Munjal M. Acharya, Veedamali S. Subramanian
Software Mentions: 1
Published: almost 4 years ago

10.1186/s40478-020-01115-0

Three-dimensional vascular microenvironment landscape in human glioblastoma
Cited by: 10
Author(s): George P. Cribaro, Elena Saavedra-López, Leire Romarate, Izaskun Mitxitorena, Laura R. Díaz, Paola V. Casanova, Meritxell Roig-Martínez, José María Gallego, Ana Pérez‐Vallés, Carlos Barcia
Software Mentions: 1
Published: almost 4 years ago

10.1186/2051-5960-1-82

Impaired plasticity of cortical dendritic spines in P301S tau transgenic mice
Cited by: 43
Author(s): Nadine Hoffmann, Mario M. Dorostkar, Sonja Blumenstock, Michel Goedert, Jochen Herms
Software Mentions: 1
Published: about 11 years ago

10.1111/acel.12157

Surface <scp>L</scp>‐type <scp>C</scp>a²⁺ channel expression levels are increased in aged hippocampus
Cited by: 42
Author(s): Felix Nunez-Santana, M. Matthew Oh, Marcia D. Antion, Amy Lee, Johannes Hell, John F. Disterhoft
Software Mentions: 1
Published: over 11 years ago

10.1111/j.1474-9726.2007.00273.x

Dramatic age-related changes in nuclear and genome copy number in the nematode Caenorhabditis elegans
Cited by: 45
Author(s): Tamara R. Golden, Kenneth B. Beckman, Andreia H. J. Lee, Nancy Dudek, Alan Hubbard, Enrique Samper, Simon Melov
Software Mentions: 1
Published: almost 18 years ago