Projects: pypi: AlignQC
https://packages.ecosyste.ms/registries/pypi.org/packages/AlignQC
Python and R based tool for assessing the quality of alignments
2 versions
Latest release: over 7 years ago
39 downloads last month
Enhanced Analysis
Educational Contributors:
[email protected]
Repository Activity:
Repository Owner:
Jason L Weirather (user)
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
-
+20
Educational commit emails
1 contributors with educational email addresses -
+4
Science terms in README
2 scientific terms found in README
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem -
-10
No science terms in description
No scientific terms found in description
Very Likely Science (100)
Papers Mentioning AlignQC 6
10.3390/cancers13051136
Nanopore Sequencing Reveals Global Transcriptome Signatures of Mitochondrial and Ribosomal Gene Expressions in Various Human Cancer Stem-like Cell PopulationsCited by: 13
Author(s): Kaya E. Witte, Oliver Hertel, Beatrice A. Windmöller, Laureen P. Helweg, Anna L. Höving, Cornelius Knabbe, Tobias Busche, Johannes F. W. Greiner, Jörn Kalinowski, Thomas Noll, F. Mertzlufft, Morris Beshay, Jesco Pfitzenmaier, Barbara Kaltschmidt, Christian Kaltschmidt, Constanze Banz‐Jansen, Matthias Simon
Software Mentions: 6
Published: over 4 years ago
10.3390/v11121132
Rapid, Unbiased PRRSV Strain Detection Using MinION Direct RNA Sequencing and Bioinformatics ToolsCited by: 22
Author(s): Shaoyuan Tan, Cheryl M.T. Dvorak, Michael P. Murtaugh
Software Mentions: 4
Published: over 5 years ago
10.12688/f1000research.10571.2
Comprehensive comparison of Pacific Biosciences and Oxford Nanopore Technologies and their applications to transcriptome analysisCited by: 332
Author(s): Jason L. Weirather, Mariateresa de Cesare, Yunhao Wang, Paolo Piazza, Vittorio Sebastiano, Xiu‐Jie Wang, David Buck, Kin Fai Au
Software Mentions: 4
Published: about 8 years ago
10.12688/wellcomeopenres.11246.3
Robust long-read native DNA sequencing using the ONT CsgG Nanopore systemCited by: 24
Author(s): Jean-Michel Carter, Shobbir Hussain
Software Mentions: 3
Published: almost 7 years ago
10.1186/s13007-020-00629-x
Analysis and comprehensive comparison of PacBio and nanopore-based RNA sequencing of the Arabidopsis transcriptomeCited by: 60
Author(s): Jiawen Cui, Nan Shen, Zhaogeng Lu, Guolu Xu, Yuyao Wang, Biao Jin
Software Mentions: 3
Published: about 5 years ago
10.3389/fgene.2020.00406
Analysis of the Mouse Y Chromosome by Single-Molecule Sequencing With Y Chromosome EnrichmentCited by: 9
Author(s): Yuki Yano, Tomoki Chiba, Hiroshi Asahara
Software Mentions: 2
Published: about 5 years ago