Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.12688/f1000research.10571.2

https://doi.org/10.12688/f1000research.10571.2

Comprehensive comparison of Pacific Biosciences and Oxford Nanopore Technologies and their applications to transcriptome analysis

Cited by: 332
Author(s): Jason L. Weirather, Mariateresa de Cesare, Yunhao Wang, Paolo Piazza, Vittorio Sebastiano, Xiu‐Jie Wang, David Buck, Kin Fai Au
Published: over 7 years ago

Software Mentions 4

cran: LSC
Local Statistical Complexity - Automatic Pattern Discovery in Spatio-Temporal Data
Papers that mentioned: 42
pypi: AlignQC
Python and R based tool for assessing the quality of alignments
Papers that mentioned: 6
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562
pypi: poretools
A toolset for working with nanopore sequencing data
Papers that mentioned: 62