Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: AREM

https://packages.ecosyste.ms/registries/pypi.org/packages/AREM

Aligning Reads by Expectation-Maximization. Based on MACS (Model Based Analysis for ChIP-Seq data)
2 versions
Latest release: over 13 years ago
51 downloads last month

Papers Mentioning AREM 3

10.1186/s12859-019-3090-0
CSA: a web service for the complete process of ChIP-Seq analysis
Cited by: 2
Author(s): Min Li, Li Tang, Fang‐Xiang Wu, Yi Pan, Jianxin Wang
Software Mentions: 8
Published: almost 5 years ago
10.1186/s13148-017-0391-x
The effect of Nipped-B-like (Nipbl) haploinsufficiency on genome-wide cohesin binding and target gene expression: modeling Cornelia de Lange syndrome
Cited by: 29
Author(s): Daniel A. Newkirk, Yen-Yun Chen, Richard Chien, Weihua Zeng, Jacob Biesinger, Ebony Flowers, Shimako Kawauchi, Rosaysela Santos, Anne L. Calof, Arthur D. Lander, Xiaohui Xie, Kyoko Yokomori
Software Mentions: 2
Published: about 7 years ago
10.1186/gb-2012-13-11-r107
Transposable elements reveal a stem cell-specific class of long noncoding RNAs
Cited by: 446
Author(s): David R. Kelley, John L. Rinn
Software Mentions: 2
Published: almost 13 years ago