Ecosyste.ms: Papers

10.1128/AAC.01002-20

The FDA-Approved Drug Nelfinavir Inhibits Lytic Cell-Free but Not Cell-Associated Nonlytic Transmission of Human Adenovirus
Cited by: 16
Author(s): Fanny Georgi, Vardan Andriasyan, Robert Witte, Luca Murer, Silvio Hemmi, Lisa Yu, Melanie Grove, Nicole Meili, Fabien Kuttler, Artur Yakimovich, Gerardo Turcatti, Urs F. Greber
Software Mentions: 2
Published: over 4 years ago

10.3389/fimmu.2020.01981

Biogenesis of HLA Ligand Presentation in Immune Cells Upon Activation Reveals Changes in Peptide Length Preference
Cited by: 7
Author(s): Fabio Marino, Aikaterini Semilietof, Justine Michaux, HuiSong Pak, George Coukos, Markus Müller, Michal Bassani-Sternberg
Software Mentions: 2
Published: about 4 years ago

10.3389/fimmu.2018.02213

Immuno-informatics Analysis to Identify Novel Vaccine Candidates and Design of a Multi-Epitope Based Vaccine Candidate Against Theileria parasites
Cited by: 26
Author(s): Prajna Parimita Kar, Anand Srivastava
Software Mentions: 2
Published: about 6 years ago

10.1002/wcms.1370

Nonadiabatic dynamics: The SHARC approach
Cited by: 225
Author(s): Sebastian Mai, Philipp Marquetand, Leticia González
Software Mentions: 2
Published: over 6 years ago

10.3389/fimmu.2019.02698

In silico Design of an Epitope-Based Vaccine Ensemble for Chagas Disease
Cited by: 38
Author(s): Lucas Michel-Todó, Pedro A. Reche, Pascal Bigey, María Jesús Pinazo, Joaquím Gascón, Julio Alonso-Padilla
Software Mentions: 2
Published: almost 5 years ago

10.3389/fgene.2019.01191

Peptide-Major Histocompatibility Complex Class I Binding Prediction Based on Deep Learning With Novel Feature
Cited by: 18
Author(s): Tianyi Zhao, Cheng Liang, Tianyi Zang, Yang Hu
Software Mentions: 2
Published: almost 5 years ago

10.3389/fgene.2020.00788

Comprehensive Analysis of Respiratory Burst Oxidase Homologs (Rboh) Gene Family and Function of GbRboh5/18 on Verticillium Wilt Resistance in Gossypium barbadense
Cited by: 18
Author(s): Ying Chang, Bo Li, Qian Shi, Rui Geng, Shuaipeng Geng, Jinlei Liu, Yuanyuan Zhang, Yingfan Cai
Software Mentions: 2
Published: about 4 years ago

10.3389/fmicb.2020.00636

Rapid and Culture Free Identification of Francisella in Hare Carcasses by High-Resolution Tandem Mass Spectrometry Proteotyping
Cited by: 6
Author(s): Natalie Witt, Sandro Andreotti, Anne Busch, Kerstin Neubert, Knut Reinert, Herbert Tomaso, David Meierhofer
Software Mentions: 2
Published: over 4 years ago

10.1186/1471-2164-13-686

A REST derived gene signature stratifies glioblastomas into chemotherapy resistant and responsive disease
Cited by: 14
Author(s): Matthew P. Wagoner, Avtar Roopra
Software Mentions: 2
Published: almost 13 years ago

10.3389/fcell.2021.727762

Ferroptosis Driver SOCS1 and Suppressor FTH1 Independently Correlate With M1 and M2 Macrophage Infiltration in Head and Neck Squamous Cell Carcinoma
Cited by: 20
Author(s): Zhangwei Hu, Yihui Wen, Rong Ma, Lin Chen, Xue‐Lan Zeng, Wang Wen, Wei Sun
Software Mentions: 2
Published: about 3 years ago

10.3389/fgene.2021.619950

New Insights Into Mitochondrial DNA Reconstruction and Variant Detection in Ancient Samples
Cited by: 4
Author(s): Maria Angela Diroma, Alessandra Modi, Martina Lari, Luca Sìneo, David Caramelli, Stefania Vai
Software Mentions: 2
Published: almost 4 years ago

10.1080/21505594.2017.1423188

Boosted TCA cycle enhances survival of zebrafish to <i>Vibrio alginolyticus</i> infection
Cited by: 53
Author(s): Meisongzhu Yang, Zhi-xue Cheng, Ming Jiang, Zao-hai Zeng, Bo Peng, Xuan‐xian Peng, Hui Li
Software Mentions: 2
Published: over 6 years ago

10.1111/eva.12128

Genotyping by sequencing resolves shallow population structure to inform conservation of Chinook salmon ( <i>Oncorhynchus tshawytscha</i> )
Cited by: 180
Author(s): Wesley A. Larson, Lisa W. Seeb, Meredith V. Everett, Ryan K. Waples, William D. Templin, James E. Seeb
Software Mentions: 2
Published: almost 11 years ago

10.1186/1471-2164-11-731

Smed454 dataset: unravelling the transcriptome of Schmidtea mediterranea
Cited by: 50
Author(s): Josep F. Abril, Francesc Cebrià, Gustavo Rodríguez-Esteban, Thomas Horn, Susanna Fraguas, B. Calvo, Kerstin Bartscherer, Emili Saló
Software Mentions: 2
Published: almost 14 years ago

10.1186/2047-783X-19-31

RETRACTED ARTICLE: Reanalysis of the gene expression profile in chronic pancreatitis via bioinformatics methods
Cited by: 4
Author(s): Hang Yuan, Bin Wu, Shumei Ma, Xiaoyu Yang, Yin Li, Aijun Li
Software Mentions: 2
Published: over 10 years ago

10.1002/ece3.6028

Boreal predator co‐occurrences reveal shared use of seismic lines in a working landscape
Cited by: 19
Author(s): Erin R. Tattersall, Joanna M. Burgar, Jason T. Fisher, A. Cole Burton
Software Mentions: 2
Published: almost 5 years ago

10.1007/s00259-021-05371-7

Radiomics and gene expression profile to characterise the disease and predict outcome in patients with lung cancer
Cited by: 39
Author(s): Margarita Kirienko, Martina Sollini, Marinella Corbetta, Emanuele Voulaz, Noemi Gozzi, Matteo Interlenghi, Francesca Gallivanone, Isabella Castiglioni, Rosanna Asselta, Stefano Duga, Giulia Soldà, Arturo Chiti
Software Mentions: 2
Published: over 3 years ago

10.1155/2020/8852258

Identification and Classification of Enhancers Using Dimension Reduction Technique and Recurrent Neural Network
Cited by: 8
Author(s): Qingwen Li, Lei Xu, Qingyuan Li, Lichao Zhang
Software Mentions: 2
Published: about 4 years ago

10.1016/j.csbj.2020.05.002

Coarse-grained (hybrid) integrative modeling of biomolecular interactions
Cited by: 17
Author(s): Jorge Roel‐Touris, Alexandre Bonvin
Software Mentions: 2
Published: almost 5 years ago

10.1038/s42003-020-01184-w

Structural studies reveal flexible roof of active site responsible for ω-transaminase CrmG overcoming by-product inhibition
Cited by: 8
Author(s): Jinxin Xu, Xiaowen Tang, Yiguang Zhu, Zhijun Yu, Kai Su, Yulong Zhang, Dong Yu, Weiming Zhu, Changsheng Zhang, Ruibo Wu, Jinsong Liu
Software Mentions: 2
Published: over 4 years ago

10.1140/epjc/s10052-017-4984-5

Measurement of double-differential cross sections for top quark pair production in pp collisions at $$\sqrt{s} = 8$$ s = 8 $$\,\text {TeV}$$ TeV and impact on parton distribution functions
Cited by: 36
Author(s): A. M. Sirunyan, A. Tumasyan, W. Adam, E. Asilar, T. Bergauer, J. Brandstetter, E. Brondolin, M. Dragicevic, J. Erö, M. Flechl, M. Friedl, R. Frühwirth, V. M. Ghete, C. Hartl, N. Hörmann, J. Hrubec, M. Jeitler, A. C. König, I. Krätschmer, D. Liko, T. Matsushita, I. Mikulec, D. Rabady, N. Rad, B. Rahbaran, H. Rohringer, J. Schieck, J. Strauss, W. Waltenberger, C.-E. Wulz, O. Dvornikov, В. Макаренко, V. Mossolov, J. Suarez Gonzalez, V. Zykunov, N. Shumeiko, S. Alderweireldt, E. A. De Wolf, X. Janssen, J. Lauwers, M. Van De Klundert, H. Van Haevermaet, P. Van Mechelen, N. Van Remortel, A. Van Spilbeeck, S. Abu Zeid, F. Blekman, J. D’Hondt, N. Daci, I. De Bruyn, K. Deroover, S. Lowette, S. Moortgat, L. Moreels, A. Olbrechts, Q. Python, K. Skovpen, S. Tavernier, W. Van Doninck, P. Van Mulders, I. Van Parijs, H. Brun, B. Clerbaux, G. De Lentdecker, H. Delannoy, G. Fasanella, L. Favart, R. Goldouzian, A. Grebenyuk, G. Karapostoli, T. Lenzi, A. Léonard, J. Luetic, T. Maerschalk, A. Marinov, A. Randle-Conde, T. Ševa, C. Vander Velde, P. Vanlaer, D. Vannerom, R. Yonamine, F. Zenoni, F. Zhang, T. Cornelis, D. Dobur, A. Fagot, M. Gul, I. Khvastunov, D. Poyraz, S. Salva, R. Schöfbeck, M. Tytgat, W. Van Driessche, E. Yazgan, N. Zaganidis, H. Bakhshiansohi, O. Bondu, S. Brochet, G. E. Bruno, A. Caudron, S. De Visscher, C. Delaere, M. Delcourt, B. Francois, A. Giammanco, A. Jafari, M. Komm, G. Krintiras, V. Lemaı̂tre, A. Magitteri, A. Mertens, M. Musich, K. Piotrzkowski, L. Quertenmont, M. Selvaggi, M. Vidal Marono, S. Wertz, N. Beliy, W. L. Aldá Júnior, F. L. Alves, G. A. Alves, L. Brito, C. Hensel, A. Moraes, M. E. Pol, P. Rebello Teles, E. Belchior Batista Das Chagas, W. Carvalho, J. Chinellato, A. Custódio, E. M. Da Costa, G. G. Da Silveira, D. De Jesus Damiao, C. De Oliveira Martins, S. Fonseca De Souza, L. M. Huertas Guativa, H. Malbouisson, D. Matos Figueiredo, C. Mora Herrera, L. Mundim, H. Nogima, W. L. Prado Da Silva, A. Santoro, A. Sznajder, E. J. Tonelli Manganote, F. Torres Da Silva De Araujo, A. Vilela Pereira, S. Ahuja, C. A. Bernardes, S. Dogra, T. R. Fernandez Perez Tomei, E. M. Gregores, P. G. Mercadante, C. S. Moon, S. F. Novaes, Sandra S. Padula, D. Romero Abad, J. C. Ruiz Vargas, А. Александров, R. Hadjiiska, P. Iaydjiev, M. Rodozov, S. Stoykova, G. Sultanov, M. Vutova, A. Dimitrov, I. Glushkov, L. Litov, B. Pavlov, P. Petkov, W. Fang, M. Ahmad, J. G. Bian, G. M. Chen, H. S. Chen, M. Chen, Y. Chen, T. Cheng, C. H. Jiang, D. Leggat, Z. Liu, F. Romeo, Manqi Ruan, S. M. Shaheen, A. Spiezia, J. Tao, C. Wang, Z. Wang, H. Zhang, J. Zhao, Y. Ban, G. Chen, Q. Li, S. Liu, Y. Mao, S. J. Qian, D. Wang, Z. Xu, C. Ávila, A. Cabrera, L. F. Chaparro Sierra, C. Florez, J. Piedra Gomez, C. F. Gonźalez Herńandez, J. D. Ruiz Alvarez, J. C. Sanabria, N. Godinović, D. Lelas, I. Puljak, P. M. Ribeiro Cipriano, T. Sculac, Ž. Antunović, M. Kovac, V. Brigljević, D. Ferenček, K. Kadija, B. Mesic, T. Šuša, M. W. Ather, A. Attikis, G. Mavromanolakis, J. Mousa, C. Nicolaou, F. Ptochos, P. A. Razis, H. Rykaczewski, М. Фингер, М. Фингер, E. Carrera Jarrin, A. Ellithi Kamel, M. A. Mahmoud, A. Radi, M. Kadastik, L. Perrini, M. Raidal, A. Tiko, C. Veelken, P. Eerola, J. Pekkanen, M. Voutilainen, J. Härkönen, T. Järvinen, V. Karimäki, R. Kinnunen, T. Lampén, K. Lassila-Perini, S. Lehti, T. Lindén, P. Luukka, J. Tuominiemi, E. Tuovinen, L. Wendland, J. Talvitie, T. Tuuva, M. Besançon, F. Couderc, M. Déjardin, D. Denegri, B. Fabbro, J. L. Faure, C. Favaro, F. Ferri, S. Ganjour, S. Ghosh, A. Givernaud, P. Gras, G. Hamel de Monchenault, P. Jarry, I. Kucher, E. Locci, M. Machet, J. Malclès, J. Rander, A. Rosowsky, M. Titov, A. Abdulsalam, I. Antropov, S. Baffioni, F. Beaudette, P. Busson, L. Cadamuro, É. Chapon, C. Charlot, O. Davignon, R. Granier de Cassagnac, M. Jo, S. Lisniak, P. Miné, M. Nguyen, C. Ochando, G. Ortona, P. Paganini, P. Pigard, S. Regnard, R. Salerno, Y. Sirois, A. G. Stahl Leiton, T. Strebler, Y. Yilmaz, A. Zabi, A. Zghiche, J.-L. Agram, J. Andreä, D. Blöch, J.-M. Brom, M. Buttignol, E. C. Chabert, N. Chanon, C. Collard, E. Conte, X. Coubez, J.-C. Fontaine, D. Gelé, U. Goerlach, A.-C. Le Bihan, P. Van Hove, S. Gadrat, S. Beauceron, C. Bernet, G. Boudoul, C. A. Carrillo Montoya, R. Chierici, D. Contardo, B. Courbon, P. Depasse, H. El Mamouni, J. Fay, L. Finco, S. Gascon, M. Gouzevitch, G. Grenier, B. Ille, F. Lagarde, I. B. Laktineh, M. Lethuillier, L. Mirabito, A. L. Pequegnot, S. Perriès, A. Popov, V. Sordini, M. Vander Donckt, P. Verdier, S. Viret, A. Khvedelidze, D. Lomidze, C. Autermann, S. Beranek, L. Felď, M. K. Kiesel, K. Klein, M. Lipiński, M. Preuten, C. Schomakers, J. Schulz, T. Verlage, A. Albert, M. Brodski, E. Dietz-Laursonn, D. Duchardt, M. Endres, M. Erdmann, S. Erdweg, T. Esch, R. Fischer, A. Güth, M. Hamer, T. Hebbeker, C. Heidemann, K. Höepfner, S. Knutzen, M. Merschmeyer, A. Meyer, P. Millet, S. Mukherjee, M. Olschewski, K. Padeken, T. Pook, M. Radziej, H. Reithler, M. Rieger, F. Scheuch, L. Sonnenschein, D. Teyssier, S. Thüer, V. Cherepanov, G. Flügge, B. Kargoll, T. Kress, A. Künsken, J. Lingemann, Th. Müller, A. Nehrkorn, A. Nowack, C. Pistone, O. Pooth, A. Stahl, M. Aldaya Martin, T. Arndt, C. Asawatangtrakuldee, K. Beernaert, O. Behnke, U. Behrens, A. A. Bin Anuar, K. Borras, A. Campbell, P. Connor, C. Contreras-Campana, F. Costanza, C. Diez Pardos, G. Dolinska, G. Eckerlin, D. Eckstein, T. Eichhorn, E. Eren, E. Gallo, J. Garay Garcia, A. Geiser, A. Gizhko, J. M. Grados Luyando, A. Grohsjean, P. Gunnellini, A. Harb, J. Hauk, M. Hempel, H. Jung, A. Kalogeropoulos, O. Karacheban, M. Kasemann, J. Keaveney, C. Kleinwort, Ie. Korol, D. Krücker, W. Lange, A. Lelek, T. Lenz, J. Leonard, K. Lipka, A. Lobanov, W. Lohmann, R. Mankel, I.-A. Melzer-Pellmann, A. Meyer, G. Mittag, J. Mnich, A. Mussgiller, D. Pitzl, R. Plačakytė, A. Raspereza, B. Roland, M. Ö. Sahin, P. Saxena, T. Schöerner-Sadenius, S. Spannagel, N. Stefaniuk, G. P. Van Onsem, R. Walsh, C. Wissing, O. Zenaiev, V. Blobel, M. Centis Vignali, A. R. Draeger, T. Dreyer, E. Garutti, D. Gonzalez, J. Haller, M. Hoffmann, A. Junkes, R. Klanner, R. Kogler, N. Kovalchuk, S. Kurz, T. Lapsien, I. Marchesini, D. Marconi, M. Meyer, M. Niedziela, D. Nowatschin, F. Pantaleo, T. Peiffer, A. Perieanu, C. Scharf, P. Schleper, A. Schmidt, Steffen Schumann, J. Schwandt, J. Sonneveld, H. Stadie, G. Steinbrück, F. M. Stober, M. Stöver, H. Tholen, D. Troendle, E. Usai, L. Vanelderen, A. Vanhoefer, B. Vormwald, M. Akbiyik, C. Barth, S. Baur, C. Baus, J. Berger, E. Butz, R. Caspart, T. Chwalek, F. Colombo, W. De Boer, A. Dierlamm, Simon Fink, B. Freund, R. Friese, M. Giffels, A. Gilbert, P. Goldenzweig, D. Haitz, F. Hartmann, S. M. Heindl, U. Husemann, F. Kassel, I. Katkov, S. Kudella, H. Mildner, M. U. Mozer, Th. Müller, M. Plagge, G. Quast, K. Rabbertz, S. Röcker, Frank Roscher, M. Schröder, I. Shvetsov, G. Sieber, H. J. Simonis, R. Ulrich, S. Wayand, M. Weber, T. Weiler, S. Williamson, C. Wöhrmann, R. Wolf, G. Anagnostou, G. Daskalakis, T. Geralis, V. A. Giakoumopoulou, A. Kyriakis, D. Loukas, I. Topsis-Giotis, S. Kesisoglou, A. Panagiotou, N. Saoulidou, E. Tziaferi, K. Kousouris, I. Evangelou, G. Flouris, C. Foudas, P. Kokkas, N. Loukas, N. Manthos, I. Papadopoulos, E. Paradas, N. Filipović, G. Pásżtor, G. Bencze, C. Hajdú, D. Horváth, F. Siklér, V. Veszprémi, G. Vesztergombi, A. J. Zsigmond, N. Béni, S. Czellár, J. Karancsi, A. Makovec, J. Molnár, Z. Szillási, M. Bartók, P. Raics, Z. L. Trocsanyi, B. Ujvári, J. R. Komaragiri, S. Bahinipati, S. Bhowmik, S. Choudhury, P. Mal, K. Mandal, A. Nayak, Deepak Kumar Sahoo, N. Sahoo, S. Swain, S. Bansal, S. B. Beri, V. Bhatnagar, R. Chawla, U. Bhawandeep, A. K. Kalsi, A. Kaur, M. Kaur, R. Kumar, P. Kumari, A. Mehta, M. Mittal, J. B. Singh, G. Walia, Ashok Kumar, A. Bhardwaj, B. C. Choudhary, R. B. Garg, S. Keshri, Ashish Kumar, S. Malhotra, M. Naimuddin, K. Ranjan, R. Sharma, V. Sharma, R. Bhattacharya, S. Bhattacharya, K. Chatterjee, S. Dey, S. Dutt, S. Dutta, S. Ghosh, N. Majumdar, A. Modak, K. Mondal, Supratik Mukhopadhyay, S. Nandan, A. Purohit, A. Roy, D. Roy, S. Roy Chowdhury, S. Sarkar, M. Sharan, S. Thakur, P. K. Behera, R. Chudasama, D. Dutta, V. Jha, V. Kumar, A. K. Mohanty, P. K. Netrakanti, L. M. Pant, P. Shukla, A. Topkar, T. Aziz, S. Dugad, G. Kole, B. Mahakud, S. Mitra, G. B. Mohanty, B. Parida, N. Sur, B. Sutar, S. Banerjee, R. K. Dewanjee, S. Ganguly, M. Guchait, Sa. Jain, Sanjeev Kumar, M. Maity, G. Majumder, K. Mazumdar, T. Sarkar, N. Wickramage, S. Chauhan, S. Dubé, V. Hegde, A. Kapoor, K. Kothekar, S. Pandey, A. Rane, S. Sharma, S. Chenarani, E. Eskandari Tadavani, S. M. Etesami, M. Khakzad, M. Mohammadi Najafabadi, M. Naseri, S. Paktinat Mehdiabadi, F. Rezaei Hosseinabadi, B. Safarzadeh, M. Zeinali, M. Felcini, M. Grünewald, M. Abbrescia, C. Calabria, C. Caputo, A. Colaleo, D. Creanza, L. Cristella, N. De Filippis, M. De Palma, L. Fiore, G. Iaselli, G. Mäggi, M. Maggi, G. Miniello, S. My, S. Nuzzo, A. Pompili, G. Pugliese, R. Radogna, A. Ranieri, G. Selvaggi, A. Sharma, L. Silvestris, R. Venditti, P. Verwilligen, G. Abbiendi, C. Battilana, D. Bonacorsi, S. Braibant-Giacomelli, L. Brigliadori, R. Campanini, P. Capiluppi, A. Castro, F. R. Cavallo, S. S. Chhibra, G. Codispoti, M. Cuffiani, G. M. Dallavalle, F. Fabbri, A. Fanfani, D. Fasanella, P. Giacomelli, C. Grandi, L. Guiducci, S. Marcellini, G. Masetti, A. Montanari, F. L. Navarria, A. Perrotta, Antônio Rossi, T. Rovelli, G. P. Siroli, N. Tosi, S. Albergo, S. Costa, A. Di Mattia, F. Giordano, R. Potenza, A. Tricomi, C. Tuvé, G. Barbagli, V. Ciulli, C. Civinini, R. D’Alessandro, E. Focardi, P. Lenzi, M. Meschini, S. Paoletti, L. Russo, G. Sguazzoni, D. Strom, L. Viliani, L. Benussi, S. Bianco, F. Fabbri, D. Piccolo, F. Primavera, V. Calvelli, F. Ferro, M. R. Monge, E. Robutti, S. Tosi, L. Brianza, F. Brivio, V. Ciriolo, M. E. Dinardo, S. Fiorendi, S. Gennai, A. Ghezzi, P. Govoni, M. Malberti, S. Malvezzi, R. A. Manzoni, D. Menasce, L. Moroni, M. Paganoni, D. Pedrini, S. Pigazzini, S. Ragazzi, T. Tabarelli de Fatis, S. Buontempo, N. Cavallo, G. De Nardo, S. Di Guida, Marco Esposito, F. Fabozzi, F. Fienga, Alberto Orso Maria Iorio, G. Lanza, L. Lista, S. Meola, P. Paolucci, C. Sciacca, F. Thyssen, P. Azzi, N. Bacchetta, L. Benato, D. Bisello, A. Boletti, R. Carlin, A. Carvalho Antunes De Oliveira, P. Checchia, M. Dall’Osso, P. De Castro Manzano, T. Dorigo, U. Dosselli, U. Gasparini, F. Gonella, S. Lacaprara, M. Margoni, A. T. Meneguzzo, J. Pazzini, N. Pozzobon, P. Ronchese, R. Rossin, F. Simonetto, E. Torassa, S. Ventura, M. Zanetti, P. Zotto, A. Braghieri, F. Fallavollita, A. Magnani, P. Montagna, S. P. Ratti, V. Re, M. Ressegotti, C. Riccardi, P. Salvini, I. Vai, P. Vitulo, Luisa Alunni Solestizi, G. M. Bilei, D. Ciangottini, L. Fanò, P. Lariccia, R. Leonardi, G. Mantovani, V. Mariani, M. Menichelli, A. Saha, A. Santocchia, K. Androsov, P. Azzurri, G. Bagliesi, J. Bernardini, T. Boccali, R. Castaldi, Maria Agnese Ciocci, R. Dell’Orso, G. Fedi, A. Giassi, M. Grippo, F. Ligabue, T. Lomtadze, L. Martini, A. Messineo, F. Palla, A. Rizzi, A. Savoy-Navarro, P. Spagnolo, Р. Тенчини, G. Tonelli, A. Venturi, P. G. Verdini, L. Barone, F. Cavallari, M. Cipriani, D. Del Re, M. Diemoz, S. Gelli, E. Longo, F. Margaroli, B. Marzocchi, P. Meridiani, G. Organtini, R. Paramatti, F. Preiato, S. Rahatlou, C. Rovelli, F. Santanastasio, N. Amapane, R. Arcidiacono, S. Argirò, M. Arneodo, N. Bartosik, R. Bellan, C. Biino, N. Cartiglia, F. Cenna, M. Costa, R. Covarelli, A. Degano, N. Demaria, B. Kiani, C. Mariotti, S. Maselli, E. Migliore, V. Monaco, E. Monteil, M. Monteno, M. M. Obertino, L. Pacher, N. Pastrone, M. Pelliccioni, Gian Luca Pinna Angioni, F. Ravera, A. Romero, M. Ruspa, R. Sacchi, K. Shchelina, V. Sola, A. Solano, A. Staiano, P. Traczyk, S. Belforte, M. Casarsa, F. Cossutti, G. Della Ricca, A. Zanetti, D. H. Kim, G. N. Kim, M. S. Kim, J. Lee, S. Lee, S. W. Lee, Y. D. Oh, S. Sekmen, D. C. Son, Y. Yang, A. Lee, H. Kim, J. A. Brochero Cifuentes, T. J. Kim, S. Cho, S. Choi, Y. Go, D. Gyun, S. Ha, B. Hong, Y. Jo, Y. Kim, K. Lee, K. S. Lee, S. Lee, Jaehoon Lim, S. K. Park, Y. Roh, J. Almond, J. Kim, H. Lee, S. B. Oh, Benjamin Charles Radburn-Smith, S. h. Seo, U. K. Yang, H. D. Yoo, G. B. Yu, M. Choi, H. Kim, J. H. Kim, J. S. H. Lee, I. C. Park, G. Ryu, M. S. Ryu, Y. Choi, J. Goh, C. Hwang, J. Lee, I. Yu, V. Dūdėnas, A. Juodagalvis, J. Vaitkus, I. Ahmed, Z. A. Ibrahim, Mohd Adli Bin Ali, F. Mohamad Idris, Wan Ahmad Tajuddin Wan Abdullah, M. N. Yusli, Z. Zolkapli, H. Castilla‐Valdez, E. De La Cruz-Burelo, I. Heredia-De La Cruz, R. López-Fernández, R. Magaña Villalba, J. Mejia Guisao, A. Sánchez-Hernández, S. Carrillo Moreno, C. Oropeza Barrera, F. Vazquez Valencia, S. Carpinteyro, I. Pedraza, H. A. Salazar Ibargüen, C. Uribe Estrada, A. Morelos Pineda, D. Krofcheck, P. H. Butler, A. Ahmad, M. Ahmad, Q. Hassan, H. R. Hoorani, W. A. Khan, A. Saddique, M. A. Shah, M. Shoaib, M. Waqas, H. Białkowska, M. Bluj, B. Boimska, T. Frueboes, M. Górski, M. Kazana, K. Nawrocki, K. Romanowska-Rybinska, M. Szleper, P. Zalewski, K. Buńkowski, A. Byszuk, K. Doroba, A. Kalinowski, M. Konecki, J. Królikowski, M. Misiura, M. Olszewski, A. Pyskir, M. Walczak, P. Bargassa, C. Beirão Da Cruz E Silva, B. Calpas, A. Di Francesco, P. Faccioli, M. Gallinaro, J. Hollar, N. Leonardo, L. Lloret Iglesias, M. V. Nemallapudi, J. Seixas, O. Toldaiev, D. Vadruccio, J. Varela, S. Afanasiev, P. Bunin, M. Gavrilenko, I. Golutvin, I. Gorbunov, A. Kamenev, V. Karjavin, A. Lanev, A. Malakhov, V. Matveev, V. Palichik, V. Perelygin, S. Shmatov, S. Shulha, N. Skatchkov, V. Smirnov, N. Voytishin, A. Zarubin, L. Chtchipounov, V. Golovtsov, Y. Ivanov, V. Kim, E. Kuznetsova, V. Murzin, V. Oreshkin, В. Сулимов, A. Vorobyev, Yu. Andreev, A. Dermenev, S. Gninenko, Н. Голубев, A. Karneyeu, M. Kirsanov, N. Krasnikov, A. Pashenkov, D. Tlisov, A. Toropin, V. Epshteyn, V. Gavrilov, N. Lychkovskaya, V. Popov, I. Pozdnyakov, G. Safronov, А. Спиридонов, M. Toms, E. Vlasov, A. Zhokin, T. Aushev, A. Bylinkin, M. Danilov, E. Popova, V. Rusinov, V. Andreev, M. Azarkin, I. Dremin, M. Kirakosyan, A. Leonidov, A. Terkulov, A. Baskakov, A. Belyaev, E. Boos, V. Bunichev, M. Dubinin, L. Dudko, A. Ershov, V. Klyukhin, Natalia Korneeva, I. Lokhtin, I. Miagkov, S. Obraztsov, M. Perfilov, V. Savrin, P. Volkov, V. Blinov, Y. Skovpen, D. Shtol, I. Azhgirey, I. Bayshev, S. Bitioukov, D. Elumakhov, В. Качанов, А. Калинин, D. Konstantinov, V. Krychkine, V. Petrov, R. Ryutin, A. Sobol, S. Troshin, N. Tyurin, A. Uzunian, A. Volkov, P. Adžić, P. Cirkovic, D. Devetak, M. Dordevic, J. Milošević, V. Reković, J. Alcaraz Maestre, M. Barrio Luna, E. Calvo, M. Cerrada, Maria Chamizo Llatas, N. Colino, B. De La Cruz, A. Delgado Peris, A. Escalante Del Valle, C. Fernandez Bedoya, J. P. Fernández Ramos, J. Flix, M. C. Fouz, P. Garcı́a-Abia, O. González López, S. Goy Lopez, J. M. Hernández, M. I. Josa, E. Navarro De Martino, A. Pérez-Calero Yzquierdo, J. Puerta Pelayo, A. Quintario Olmeda, I. Redondo, L. Romero, M. S. Soares, J. F. de Trocóniz, M. Missiroli, D. Moran, J. Cuevas, C. Erice, J. Fernández Menéndez, I. González Caballero, J. R. Gonźalez Ferńandez, E. Palencia Cortezón, S. Sánchez Cruz, I. Suárez Andrés, P. Vischia, J. M. Vizan Garcia, I. J. Cabrillo, A. Calderón, E. Currás, M. Fernández, J. Garcia-Ferrero, G. Gómez, A. Lopez Virto, J. Marco, C. Martínez-Rivero, F. Matorras, J. Piedra Gomez, T. Rodrigo, A. Ruiz-Jimeno, L. Scodellaro, N. Trevisani, I. Vila, R. Vilar Cortabitarte, D. Abbaneo, E. Auffray, G. Auzinger, P. Baillon, A. H. Ball, D. Barney, P. Bloch, A. Bocci, C. Botta, T. Camporesi, R. Castello, M. Cepeda, G. Cerminara, Y. Chen, A. Cimmino, D. d’Enterria, A. Dabrowski, V. Daponte, A. David, M. De Gruttola, A. De Roeck, E. Di Marco, M. Dobson, B. Dorney, T. du Pree, D. Duggan, M. Dünser, N. Dupont, A. Elliott-Peisert, P. Everaerts, S. Fartoukh, G. Franzoni, J. Fulcher, W. Funk, D. Gigi, K. Gill, M. Girone, F. Glege, D. Gulhan, S. Gundacker, M. Guthoff, P. Harris, J. Hegeman, V. Innocente, P. Janot, J. Kieseler, H. Kirschenmann, V. Knünz, A. Kornmayer, M. J. Kortelainen, M. Krammer, C. Lange, P. Lecoq, C. Lourenço, M. T. Lucchini, L. Malgeri, M. Mannelli, A. Martelli, F. Meijers, J. A. Merlin, S. Mersi, E. Meschi, P. Milenović, F. Moortgat, S. Morovic, M. Mulders, H. Neugebauer, S. Orfanelli, L. Orsini, L. Pape, E. Pérez, M. Peruzzi, A. Petrilli, G. Petrucciani, A. Pfeiffer, M. Pierini, A. Rácz, T. Reis, G. Rolandi, M. Rovere, H. Sakulin, J. B. Sauvan, C. Schäfer, C. Schwick, M. Seidel, A. Sharma, P. Silva, P. Sphicas, J. Steggemann, M. Stoye, Y. Takahashi, M. Tosi, D. Treille, A. Triossi, A. Tsirou, V. Veckalns, G. I. Veres, M. Verweij, N. Wardle, H. K. Wöhri, A. Zagoździńska, Wolfram Dietrich Zeuner, W. Bertl, K. Deiters, W. Erdmann, R. Horisberger, Q. Ingram, Hans-Christian Kaestli, D. Kotlinśki, U. Langenegger, T. Rohe, S. A. Wiederkehr, F. Bachmair, L. Bäni, L. Bianchini, B. Casal, G. Dissertori, M. Dittmar, M. Donegà, C. Grab, C. Heidegger, D. Hits, J. Hoß, G. Kasieczka, W. Lustermann, B. Mangano, M. Marionneau, P. Martinez Ruiz del Arbol, M. Masciovecchio, M. T. Meinhard, D. Meister, F. Micheli, P. Musella, F. Nessi‐Tedaldi, F. Pandolfi, J. Pata, F. Pauß, G. Perrin, L. Perrozzi, M. Quittnat, M. Rossini, M. Schönenberger, A. Starodumov, V. R. Tavolaro, K. Theofilatos, R. Wallny, T. K. Aarrestad, C. Amsler, L. Caminada, M. F. Canelli, A. De Cosa, S. Donato, C. Galloni, A. Hinzmann, T. Hreus, B. Kilminster, J. Ngadiuba, D. Pinna, G. Rauco, P. Robmann, D. Salerno, C. Seitz, Y. Yang, A. Zucchetta, V. Candelise, T. H. Doan, Sh. Jain, R. Khurana, M. Konyushikhin, C. M. Kuo, W. Lin, A. Pozdnyakov, S. S. Yu, Arun Kumar, P. Chang, Yu‐Wei Chang, Y. Chào, K. F. Chen, P. H. Chen, F. Fiori, W.-S. Hou, Y. Hsiung, Y. F. Liu, R.-S. Lu, M. Miñano Moya, E. Paganis, A. Psallidas, Jui-Fa Tsai, B. Asavapibhop, G. Singh, N. Srimanobhas, N. Suwonjandee, A. Adıgüzel, F. Boran, S. Çerçi, S. Damarseckin, Z. S. Demiroglu, C. Dozen, I. Dumanoğlu, S. Girgis, G. Gökbulut, Y. Güler, I. Hoş, E. E. Kangal, O. Kara, U. Kiminsu, M. Oglakci, G. Önengüt, K. Ozdemir, D. Sunar Cerci, B. Tali, H. Topakli, S. Turkcapar, I. S. Zorbakir, C. Zorbilmez, B. Bilin, S. Bilmiş, B. Işıldak, G. Karapinar, M. Yalvac, M. Zeyrek, E. Gülmez, M. Kaya, O. Kaya, E. A. Yetkin, T. Yetkin, A. Çakır, K. Cankoçak, S. Sen, B. Grynyov, L. Levchuk, P. Sorokin, R. Aggleton, F. Ball, L. Beck, J. J. Brooke, D. Burns, E. Clément, D. Cussans, H. Flächer, J. Goldstein, M. Grimes, G. P. Heath, H. F. Heath, J. Jacob, L. Kreczko, C. Lucas, D. M. Newbold, S. Paramesvaran, A. Poll, T. Sakuma, Sarah Seif El Nasr-Storey, D. Smith, V. J. Smith, K. W. Bell, A. Belyaev, C. Brew, R. M. Brown, L. Calligaris, D. Cieri, D. J. A. Cockerill, J. A. Coughlan, K. Harder, S. Harper, E. Olaiya, D. Petyt, C. H. Shepherd-Themistocleous, A. Thea, I. R. Tomalin, T. Williams, M. Baber, R. Bainbridge, O. Buchmüller, A. Bundock, S. Casasso, M. Citron, D. Colling, L. Corpe, P. Dauncey, G. Davies, A. De Wit, M. Della Negra, R. Di Maria, P. Dunne, A. Elwood, D. Futyan, Y. Haddad, G. Hall, G. Iles, T. James, R. Lane, C. Laner, L. Lyons, A.-M. Magnan, S. Malik, L. Mastrolorenzo, J. Nash, A. Nikitenko, J. Pela, B. Penning, M. Pesaresi, D. M. Raymond, A. Richards, A. Rose, E. Scott, C. Seez, S. Summers, A. Tapper, K. Uchida, M. Vazquez Acosta, T. Virdee, J. Wright, S. C. Zenz, J. E. Cole, P. R. Hobson, A. Khan, P. Kyberd, I. D. Reid, P. Symonds, L. Teodorescu, M. Turner, A. Borzou, K. Call, J. Dittmann, K. Hatakeyama, H. Liu, N. Pastika, R. Bartek, A. Dominguez, A. Buccilli, S. I. Cooper, C. Henderson, P. Rumerio, C. West, D. Arcaro, A. Avetisyan, T. Bose, D. Gastler, D. Rankin, C. Richardson, J. Rohlf, L. Sulak, D. Zou, G. Benelli, D. Ćutts, A. Garabedian, J. Hakala, U. Heintz, J. M. Hogan, O. Jesus, K. H. M. Kwok, E. Laird, G. Landsberg, Z. Mao, M. Narain, S. Piperov, S. Sagir, E. Spencer, R. Syarif, R. Breedon, D. Burns, M. Calderón De La Barca Sánchez, S. Chauhan, M. Chertok, J. Conway, R. Conway, P. T. Cox, R. Erbacher, C. Flores, G. Funk, M. Gardner, W. Ko, R. Lander, C. Mclean, M. Mulhearn, D. Pellett, J. Pilot, S. Shalhout, M. Shi, James W. Smith, M. Squires, D. Stolp, K. Tos, M. Tripathi, M. Bachtis, C. Bravo, R. Cousins, A. Dasgupta, A. Florent, J. Hauser, M. Ignatenko, N. Mccoll, D. Saltzberg, C. Schnaible, V. Valuev, M. Weber, E. Bouvier, K. Burt, R. Clare, J. Ellison, J. W. Gary, S. M. A. Ghiasi Shirazi, G. Hanson, J. Heilman, P. Jandir, E. Kennedy, F. Lacroix, O. R. Long, M. Olmedo Negrete, M. I. Paneva, A. Shrinivas, W. Si, H. Wei, S. Wimpenny, B. R. Yates, J. G. Branson, G. B. Cerati, S. Cittolin, M. Derdzinski, R. Gerosa, A. Holzner, D. Klein, V. Krutelyov, J. Letts, I. Macneill, D. Olivito, S. Padhi, M. Pieri, M. Sani, V. Sharma, S. Simon, M. Tadel, A. Vartak, S. Wasserbaech, C. Welke, J. Wood, F. Würthwein, A. Yagil, G. Zevi Della Porta, N. Amin, R. Bhandari, J. Bradmiller-Feld, C. Campagnari, A. Dishaw, V. Dutta, M. Franco Sevilla, C. George, F. Golf, L. Gouskos, J. Gran, R. Heller, J. Incandela, Sam Daniel Mullin, A. Ovcharova, H. Qu, J. Richman, D. Stuart, I. Suarez, J. Yoo, D. M. Anderson, J. Bendavid, A. Bornheim, J. Bunn, J. Duarte, J. M. Lawhorn, A. Mott, H. B. Newman, C. Peña, M. Spiropulu, J. R. Vlimant, S. Xie, R. Y. Zhu, M. B. Andrews, T. Ferguson, M. Paulini, J. Russ, M. Sun, H. Vogel, I. Vorobiev, M. Weinberg, J. P. Cumalat, W. T. Ford, F. Jensen, A. Johnson, M. Kröhn, S. Leontsinis, T. Mulholland, K. Stenson, S.R. Wagner, J. Alexander, J. Chaves, J. Chu, S. Dittmer, K. Mcdermott, N. Mirman, J. R. Patterson, A. Rinkevičius, A. Rýd, L. Skinnari, L. Soffi, S. M. Tan, Z. Tao, J. Thom, J. Tucker, P. Wittich, M. Zientek, D. Winn, S. Abdullin, M. Albrow, G. Apollinari, A. Apresyan, S. Banerjee, L. A. T. Bauerdick, A. Beretvas, J. Berryhill, P. C. Bhat, G. Bolla, K. Burkett, J. N. Butler, H. W. K. Cheung, F. Chlebana, S. Cihangir, M. Cremonesi, V. D. Elvira, I. Fisk, J. Freeman, E. Gottschalk, L. Gray, D. Green, S. Grünendahl, O. Gutsche, D. Hare, R. M. Harris, S. Hasegawa, J. Hirschauer, Z. Hu, B. Jayatilaka, S. Jindariani, M. Johnson, U. Joshi, B. Klima, B. Kreis, S. Lammel, J. Linacre, D. Lincoln, R. Lipton, M. Liu, T. Liu, R. Lopes De Sá, J. Lykken, K. Maeshima, N. Magini, J. M. Marraffino, S. Maruyama, D. Mason, P. McBride, P. Merkel, S. Mrenna, S. Nahn, V. O’Dell, K. Pedro, O. Prokofyev, G. Rakness, L. Ristori, E. Sexton-Kennedy, A. Soha, W. J. Spalding, L. Spiegel, S. Stoynev, J. Strait, N. Strobbe, L. Taylor, S. Tkaczyk, N. V. Tran, L. Uplegger, E. W. Vaandering, C. Vernieri, M. Verzocchi, R. Vidal, M. Wang, H. Weber, A. Whitbeck, Y. Wu, D. Acosta, P. Avery, P. Bortignon, D. Bourilkov, A. Brinkerhoff, A. Carnes, M. Carver, D. Curry, S. Das, R. D. Field, I. K. Furic, J. Königsberg, A. Korytov, J. F. Low, P. Ma, K. Matchev, H. Mei, G. Mitselmakher, D. Rank, L. Shchutska, D. Sperka, L. Thomas, J. Wang, S. Wang, J. Yelton, S. Linn, P. Markowitz, G. Martı́nez, J. L. Rodriguez, A. Ackert, T. Adams, A. Askew, S. Bein, S. Hagopian, V. Hagopian, K. F. Johnson, T. Kolberg, T. Perry, H. Prosper, A. Santra, R. Yohay, M. M. Baarmand, V. Bhopatkar, S. Colafranceschi, M. Hohlmann, D. Noonan, T. Roy, F. Yumiceva, M. R. Adams, L. Apanasevich, D. Berry, R. R. Betts, R. Cavanaugh, X. Chen, O. Evdokimov, C. E. Gerber, D. A. Hangal, D. J. Hofman, K. Jung, J. Kamin, I. D. Sandoval Gonzalez, H. Trauger, N. Varelas, H. Wang, Z. Wu, J. Zhang, B. Bilki, W. Clarida, K. Dilsiz, S. Durgut, R. P. Gandrajula, M. Haytmyradov, V. Khristenko, J.-P. Merlo, H. Mermerkaya, A. Mestvirishvili, A. Moeller, J. Nachtman, H. Oğul, Y. Onel, F. Özok, A. Penzo, C. Snyder, E. Tiras, J. Wetzel, K. Yi, B. Blumenfeld, A. Cocoros, N. Eminizer, D. Fehling, Feng Liu, A. V. Gritsan, P. Maksimović, J. Roskes, U. Sarica, M. Swartz, M. Xiao, C. You, A. Al-bataineh, P. Baringer, A. Bean, S. Boren, J. Bowen, J. Castle, L. Forthomme, S. Khalil, A. Kropivnitskaya, D. Majumder, W. Mcbrayer, M. Murray, S. Sanders, R. Stringer, J. D. Tapia Takaki, Q. Wang, A. Ivanov, K. Kaadze, Y. Maravin, A. Mohammadi, L. K. Saini, N. Skhirtladze, S. Toda, F. Rebassoo, D. Wright, C. Anelli, A. Baden, O. Baron, A. Belloni, B. Calvert, S. C. Eno, C. Ferraioli, J. A. Gomez, N. J. Hadley, S. Jabeen, G. Y. Jeng, R. G. Kellogg, J. Kunkle, A. C. Mignerey, F. Ricci-Tam, Y. H. Shin, A. Skuja, M. B. Tonjes, S. C. Tonwar, D. Abercrombie, B. Allen, A. Apyan, V. Azzolini, R. Barbieri, A. Baty, R. Bi, K. Bierwagen, S. Brandt, W. Busza, I. A. Cali, M. D’Alfonso, Z. Demiragli, G. Gomez Ceballos, M. Goncharov, D. Hsu, Y. Iiyama, G. M. Innocenti, M. Klute, D. Kovalskyi, K. Krajczár, Y. S. Lai, Y.-J. Lee, A. Levin, P. D. Luckey, B. Maier, A. C. Marini, C. Mcginn, C. Mironov, S. Narayanan, X. Niu, C. Paus, C. Roland, G. Roland, J. Salfeld-Nebgen, G. S. F. Stephans, K. Tatar, D. Velicanu, J. Wang, T. W. Wang, B. Wysłouch, A. C. Benvenuti, Rajdeep Mohan Chatterjee, A. Evans, Peter Hansen, S. Kalafut, S. C. Kao, Y. Kubota, Z. Lesko, J. Mans, S. Nourbakhsh, N. Ruckstuhl, R. Rusack, N. Tambe, J. Turkewitz, J. G. Acosta, S. Oliveros, E. Avdeeva, K. Bloom, D. R. Claes, C. Fangmeier, R. Gonzalez Suarez, R. Kamalieddin, I. Kravchenko, A. Malta Rodrigues, J. Monroy, Joaquin Emilo Siado, G. R. Snow, B. Stieger, M. Alyari, J. Dolen, A. Godshalk, C. Harrington, I. Iashvili, J. Kaisen, D. Nguyen, Andy Parker, S. Rappoccio, B. Roozbahani, G. Hamel de Monchenault, E. Barberis, A. Hortiangtham, A. Massironi, D. M. Morse, D. Nash, T. Orimoto, R. Teixeira De Lima, D. Trocino, R.-J. Wang, D. Wood, S. Bhattacharya, O. Charaf, K. A. Hahn, N. Mucia, N. Odell, B. Pollack, Michael Henry Schmitt, K. Sung, M. Trovato, M. Velasco, N. Dev, M. Hildreth, K. Hurtado Anampa, C. Jessop, Daniel John Karmgard, N. Kellams, K. Lannon, N. Marinelli, F. Meng, C. Mueller, Y. Musienko, M. Planer, A. Reinsvold, R. Ruchti, N. Rupprecht, G. Smith, S. Taroni, M. Wayne, M. Wolf, A. Woodard, J. Alimena, L. Antonelli, B. Bylsma, Lloyd Stanley Durkin, S. Flowers, B. Francis, A. Hart, C. Hill, W. Ji, B. Liu, W. Luo, D. Puigh, B. L. Winer, H. W. Wulsin, S. Cooperstein, O. Driga, P. Elmer, J. Hardenbrook, P. Hebda, D. Lange, J. Luo, D. Marlow, T. Medvedeva, K. Mei, I. Ojalvo, J. Olsen, C. Palmer, P. Piroué, D. Stickland, A. Svyatkovskiy, C. Tully, S. Malik, A. Barker, V. E. Barnes, S. Folgueras, L. Gutay, M. K. Jha, M. Jones, A. W. Jung, A. Khatiwada, D. H. Miller, N. Neumeister, J. F. Schulte, X. Shi, J. Sun, F. Wang, W. Xie, N. Parashar, J. Stupak, A. Adair, B. Akgün, Z. Chen, K. M. Ecklund, F. J. M. Geurts, M. Guilbaud, W. Li, B. Michlin, M. Northup, B. P. Padley, R. Schöfbeck, J. Rorie, Z. Tu, J. Zabel, B. Betchart, A. Bodek, P. de Barbaro, R. Démina, Y. t. Duh, T. Ferbel, M. Galanti, A. García-Bellido, J. Han, O. Hindrichs, A. Khukhunaishvili, K. H. Lo, P. Tan, M. Verzetti, A. Agapitos, J. P. Chou, Y. Gershtein, T. A. Gómez Espinosa, E. Halkiadakis, M. Heindl, E. W. Hughes, S. Kaplan, R. Kunnawalkam Elayavalli, S. Kyriacou, A. Lath, R. Montalvo, K. Nash, M. Osherson, H. Saka, S. Salur, S. Schnetzer, D. Sheffield, S. Somalwar, R. Stone, S. Thomas, P. Thomassen, M. Walker, A. G. Delannoy, M. Foerster, J. Heideman, G. Riley, K. Rose, S. Spanier, K. Thapa, O. Bouhali, A. Çelik, M. Dalchenko, M. De Mattia, A. Delgado, S. Dildick, R. Eusebi, J. Gilmore, Tao Huang, E. Juska, T. Kamon, R. Mueller, Y. Pakhotin, R. Patel, A. Perloff, L. Perniè, D. Rathjens, A. Safonov, A. Tatarinov, K. A. Ulmer, N. Akchurin, J. Damgov, F. De Guio, C. Dragoiu, P. R. Dudero, J. Faulkner, E. Gurpinar, S. Kunori, K. Lamichhane, S. W. Lee, T. Libeiro, T. Peltola, S. Undleeb, I. Volobouev, Z. Wang, S. Greene, A. Gurrola, R. Janjam, W. Johns, C. Maguire, A. Melo, H. Ni, P. Sheldon, S. Tuo, J. Velkovska, Q. H. Xu, M. W. Arenton, P. Barria, B. Cox, R. Hirosky, A. Ledovskoy, H. Li, C. Neu, T. Sinthuprasith, X. Sun, Y. Wang, E. Wolfe, F. Xia, Christopher Clarke, R. Harr, P. E. Karchin, J. Sturdy, S. Zaleski, D. A. Belknap, J. Buchanan, C. Caillol, S. Dasu, L. Dodd, S. Đurić, B. Gomber, M. Grothe, M. Herndon, A. Hervé, U. Hussain, P. Klabbers, A. Lanaro, A. Levine, K. Long, R. Loveless, G. A. Pierro, G. Polese, T. Ruggles, A. Savin, N. Smith, W. H. Smith, D. Taylor, N. Woods
Software Mentions: 2
Published: over 7 years ago

10.3389/fmicb.2018.01397

The Role of Mass Spectrometry in Structural Studies of Flavin-Based Electron Bifurcating Enzymes
Cited by: 8
Author(s): Monika Tokmina‐Lukaszewska, Angela Patterson, Luke Berry, Liam W. Scott, Narayanaganesh Balasubramanian, Brian Bothner
Software Mentions: 2
Published: over 6 years ago

10.1186/s12885-017-3382-6

Whole exome sequencing of an asbestos-induced wild-type murine model of malignant mesothelioma
Cited by: 28
Author(s): Sophie Sneddon, Ann Marie Patch, Ian M. Dick, Stephen H. Kazakoff, John V. Pearson, Nicola Waddell, Richard J. N. Allcock, Robert A. Holt, Bruce Robinson, Jenette Creaney
Software Mentions: 2
Published: over 7 years ago

10.3390/cells8040298

miR-1306 Mediates the Feedback Regulation of the TGF-β/SMAD Signaling Pathway in Granulosa Cells
Cited by: 22
Author(s): Liu Yang, Xiaohong Du, Lu Liu, Qiuyu Cao, Zengxiang Pan, Qifa Li
Software Mentions: 2
Published: over 5 years ago

10.3390/antibiotics9030123

A Novel, Integron-Regulated, Class C β-Lactamase
Cited by: 12
Author(s): Maria-Elisabeth Böhm, Mohammad Reza Razavi, Carl-Fredrik Flach, D. G. Joakim Larsson
Software Mentions: 2
Published: over 4 years ago

10.1038/s41420-021-00413-3

The oncogene Mct-1 promotes progression of hepatocellular carcinoma via enhancement of Yap-mediated cell proliferation
Cited by: 1
Author(s): Wenjie Yang, Yicheng Ni, Shuguang Yang, Jicheng Yang, Xiaopei Yang, Feng Cheng, Xuehao Wang, Feng Zhang, Jianhua Rao
Software Mentions: 2
Published: over 3 years ago

10.1038/s41421-021-00259-0

Structure of the full-length human Pannexin1 channel and insights into its role in pyroptosis
Cited by: 11
Author(s): Sensen Zhang, Baolei Yuan, Jordy Homing Lam, Jun Zhou, Xuan Zhou, Gerardo Ramos‐Mandujano, Xin‐Xia Tian, Yang Liu, Han Ren, Li Yu, Xin Gao, Maojun Yang
Software Mentions: 2
Published: over 3 years ago

10.3390/cells9020355

Impaired Nuclear Export of the Ribonucleoprotein Complex and Virus-Induced Cytotoxicity Combine to Restrict Propagation of the A/Duck/Malaysia/02/2001 (H9N2) Virus in Human Airway Cells
Cited by: 2
Author(s): Sriram Kumar, David Yeo, Nisha Muralidharan, Soak Kuan Lai, Cathlyn Tong, Boon Huan Tan, Richard J. Sugrue
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0072670

A Minimal Set of Tissue-Specific Hypomethylated CpGs Constitute Epigenetic Signatures of Developmental Programming
Cited by: 20
Author(s): Alejandro Colaneri, Tianyuan Wang, Vijayakanth Pagadala, Jaya Kittur, Nickolas G. Staffa, Shyamal D. Peddada, Elvira Isganaitis, Mary Elizabeth Patti, Lutz Birnbaumer
Software Mentions: 2
Published: about 11 years ago

10.1186/s12864-019-5882-z

Genome-wide identification, phylogeny, evolutionary expansion and expression analyses of bZIP transcription factor family in tartary buckwheat
Cited by: 26
Author(s): Moyang Liu, Yongdi Wen, Wenjun Sun, Zhaotang Ma, Li Huang, Qi Wu, Zizhong Tang, Tongliang Bu, Chenglei Li, Hui Chen
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0238784

Expression characteristics and regulatory mechanism of Apela gene in liver of chicken (Gallus gallus)
Cited by: 4
Author(s): Wenbo Tan, Hua Zheng, Dandan Wang, Fangyuan Tian, Hong Li, Xiaojun Liu
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0247841

Comprehensive in silico analysis and molecular dynamics of the superoxide dismutase 1 (SOD1) variants related to amyotrophic lateral sclerosis
Cited by: 20
Author(s): Gabriel Rodrigues Coutinho Pereira, Bárbara de Azevedo Abrahim Vieira, Joelma Freire De Mesquita
Software Mentions: 2
Published: over 3 years ago

10.1186/1471-2105-12-383

caCORRECT2: Improving the accuracy and reliability of microarray data in the presence of artifacts
Cited by: 15
Author(s): Richard A. Moffitt, Qiqin Yin-Goen, Todd H. Stokes, R. Mitchell Parry, James H Torrance, John H. Phan, Andrew N. Young, May D. Wang
Software Mentions: 2
Published: about 13 years ago

10.1371/journal.pone.0020085

OrthoList: A Compendium of C. elegans Genes with Human Orthologs
Cited by: 375
Author(s): Daniel D. Shaye, Iva Greenwald
Software Mentions: 2
Published: over 13 years ago

10.3390/cells1041029

A Novel Type III Endosome Transmembrane Protein, TEMP
Cited by: 1
Author(s): Rajith Aturaliya, Markus C. Kerr, Rohan D. Teasdale
Software Mentions: 2
Published: about 12 years ago

10.1371/journal.pone.0206689

The biological functions of target genes in pan-cancers and cell lines were predicted by miR-375 microarray data from GEO database and bioinformatics
Cited by: 4
Author(s): Jiang‐Hui Zeng, Xuzhi Liang, Huihua Lan, Xu Zhu, Xiu-Yun Liang
Software Mentions: 2
Published: about 6 years ago

10.3390/molecules25214997

Synthesis, Molecular Docking Screening and Anti-Proliferative Potency Evaluation of Some New Imidazo[2,1-b]Thiazole Linked Thiadiazole Conjugates
Cited by: 29
Author(s): Huda R. M. Rashdan, Aboubakr H. Abdelmonsef, Ihsan A. Shehadi, Sobhi M. Gomha, A. M. Soliman, Huda K. Mahmoud
Software Mentions: 2
Published: about 4 years ago

10.1186/1471-2407-11-223

SIP1 is downregulated in hepatocellular carcinoma by promoter hypermethylation
Cited by: 30
Author(s): Tolga Acun, Emin Öztaş, Tamer Yağcı, Mustafa Cengiz Yakıcıer
Software Mentions: 2
Published: over 13 years ago

10.1371/journal.pone.0195971

Accurate prediction of functional, structural, and stability changes in PITX2 mutations using in silico bioinformatics algorithms
Cited by: 33
Author(s): Morteza Seifi, Michael A. Walter
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0046084

Assessing Predictors of Changes in Protein Stability upon Mutation Using Self-Consistency
Cited by: 87
Author(s): Grant Thiltgen, Richard A. Goldstein
Software Mentions: 2
Published: about 12 years ago

10.1186/s12859-017-1789-3

Vermont: a multi-perspective visual interactive platform for mutational analysis
Cited by: 7
Author(s): Alexandre Victor Fassio, Pedro Martins, Samuel da S. Guimarães, S. A. Sócrates, Vagner S. Ribeiro, Raquel Cardoso de Melo‐Minardi, Simonton Andrade Silveira
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0250018

Agricultural co-operatives participating in supply chain integration in China: A qualitative comparative analysis
Cited by: 10
Author(s): Jiacheng Zhang, Jianli Luo, Li Jia
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0052516

Comparative Analysis of Methods for Identifying Recurrent Copy Number Alterations in Cancer
Cited by: 11
Author(s): Xiguo Yuan, Junying Zhang, Shengli Zhang, Guoqiang Yu, Yue Wang
Software Mentions: 2
Published: almost 12 years ago

10.1186/s13100-015-0049-1

Identification and characterization of a minisatellite contained within a novel miniature inverted-repeat transposable element (MITE) of Porphyromonas gingivalis
Cited by: 6
Author(s): Brian Klein, Tsute Chen, Jodie C. Scott, Andrea L. Koenigsberg, Marilyn J. Duncan, Linden T. Hu
Software Mentions: 2
Published: about 9 years ago

10.1186/1471-2164-8-193

Profiling of chicken adipose tissue gene expression by genome array
Cited by: 82
Author(s): Hongbao Wang, Hui Li, Qigui Wang, Xin Yu Zhang, Shouzhi Wang, Yuxiang Wang, Xiuping Wang
Software Mentions: 2
Published: over 17 years ago

10.1002/1878-0261.12154

mi<scp>RNA</scp> profiling identifies deregulated mi<scp>RNA</scp>s associated with osteosarcoma development and time to metastasis in two large cohorts
Cited by: 41
Author(s): Gitte Brinch Andersen, Alice Knudsen, Henrik Hager, Lise Lotte Hansen, Jörg Tost
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0030483

TEPITOPEpan: Extending TEPITOPE for Peptide Binding Prediction Covering over 700 HLA-DR Molecules
Cited by: 91
Author(s): Lianming Zhang, Yiqing Chen, Hau-San Wong, Shuigeng Zhou, Hiroshi Mamitsuka, Shanfeng Zhu
Software Mentions: 2
Published: over 12 years ago

10.1186/s12864-019-5865-0

Benchmarking subcellular localization and variant tolerance predictors on membrane proteins
Cited by: 13
Author(s): Tommaso Orioli, Mauno Vihinen
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0238179

Genome-wide identification and expression profiling of the carotenoid cleavage dioxygenase (CCD) gene family in Brassica napus L
Cited by: 12
Author(s): Xin-Tong Zhou, Longfei Jia, Mouzheng Duan, Xue Chen, Cailin Qiao, Jinqi Ma, Chao Zhang, Fuyu Jing, Shengsen Zhang, Bo Yang, Liyuan Zhang, Jiana Li
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0234694

RapidRat: Development, validation and application of a genotyping-by-sequencing panel for rapid biosecurity and invasive species management
Cited by: 6
Author(s): Bryson M. F. Sjodin, Robyn L. Irvine, Michael A. Russello
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0099408

Ensemble Generation and the Influence of Protein Flexibility on Geometric Tunnel Prediction in Cytochrome P450 Enzymes
Cited by: 16
Author(s): Laura J. Kingsley, Markus A. Lill
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0252213

Genome-wide identification, phylogenetic, and expression analysis under abiotic stress conditions of LIM gene family in Medicago sativa L.
Cited by: 6
Author(s): Lili Nian, Xuelu Liu, Yingbo Yang, Xiaolin Zhu, Xianfeng Yi, Fasih Ullah Haider
Software Mentions: 2
Published: over 3 years ago

10.1186/s12014-020-09290-x

Using phosphoproteomics data to understand cellular signaling: a comprehensive guide to bioinformatics resources
Cited by: 25
Author(s): Sara R. Savage, Bing Zhang
Software Mentions: 2
Published: over 4 years ago

10.3389/fmicb.2020.577497

An Educational Bioinformatics Project to Improve Genome Annotation
Cited by: 5
Author(s): Zoie Amatore, Susan C. Gunn, Laura Harris
Software Mentions: 2
Published: almost 4 years ago

10.3390/microorganisms8101561

Population Genomic Analysis of Mycoplasma bovis Elucidates Geographical Variations and Genes associated with Host-Types
Cited by: 13
Author(s): Roshan Kumar, Karen B. Register, Jane Christopher‐Hennings, P. Moroni, G. Gioia, Nuria Garcı́a-Fernández, Julia Nelson, Murray Jelinski, Inna Lysnyansky, Darrell O. Bayles, David P. Alt, Joy Scaria
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0004162

Molecular Time-Course and the Metabolic Basis of Entry into Dauer in Caenorhabditis elegans
Cited by: 57
Author(s): Pan Young Jeong, Min Seok Kwon, Hyoe Jin Joo, Young Ki Paik
Software Mentions: 2
Published: almost 16 years ago

10.1186/1471-2164-11-99

Trichomonas vaginalis vast BspA-like gene family: evidence for functional diversity from structural organisation and transcriptomics
Cited by: 69
Author(s): Christophe Noël, Nicia Diaz, Thomas Sicheritz-Pontén, Lucie Šafaříková, Jan Tachezy, Petrus Tang, Pier Luigi Fiori, Robert P. Hirt
Software Mentions: 2
Published: almost 15 years ago

10.1002/ece3.5034

Upward elevation and northwest range shifts for alpine <i>Meconopsis</i> species in the Himalaya–Hengduan Mountains region
Cited by: 41
Author(s): Xie He, Kevin S. Burgess, Xuefei Yang, Antje Ahrends, Lian‐Ming Gao, Li D
Software Mentions: 2
Published: over 5 years ago

10.3390/microorganisms8020254

Ethnic Differences Shape the Alpha but Not Beta Diversity of Gut Microbiota from School Children in the Absence of Environmental Differences
Cited by: 16
Author(s): Ke Liu, Yongling Zhang, Qinglin Li, Huan Li, Danfeng Long, Shijuan Yan, Wenjie Huang, Ruijun Long, Xiaodan Huang
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0112969

The Interaction of RNA Helicase DDX3 with HIV-1 Rev-CRM1-RanGTP Complex during the HIV Replication Cycle
Cited by: 24
Author(s): Seyed Hanif Mahboobi, Alex A. Javanpour, Mohammad R. K. Mofrad
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0010126

Discovery of Selective Inhibitors Against EBNA1 via High Throughput In Silico Virtual Screening
Cited by: 58
Author(s): Ning Li, Scott B. Thompson, D. Schultz, Weiliang Zhu, Hualiang Jiang, Cheng Luo, Paul M. Lieberman
Software Mentions: 2
Published: over 14 years ago

10.3390/microorganisms8030422

Phylogenetic Grouping of Human Ocular Escherichia coli Based on Whole-Genome Sequence Analysis
Cited by: 7
Author(s): Konduri Ranjith, Chinthala Reddy SaiAbhilash, Gumpili Sai Prashanthi, Shalem Raj Padakandla, Savitri Sharma, Sisinthy Shivaji
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0122294

A Grammar Inference Approach for Predicting Kinase Specific Phosphorylation Sites
Cited by: 17
Author(s): Sriparna Datta, Soumik Mukhopadhyay
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0017459

The Contribution of Coevolving Residues to the Stability of KDO8P Synthase
Cited by: 15
Author(s): Sharon H. Ackerman, Domenico L. Gatti
Software Mentions: 2
Published: over 13 years ago

10.1186/1471-2105-7-364

Improving the quality of protein structure models by selecting from alignment alternatives
Cited by: 19
Author(s): Iris E. Sommer, Stefano Toppo, Oliver Sander, Thomas Lengauer, Silvio C. E. Tosatto
Software Mentions: 2
Published: over 18 years ago

10.1371/journal.pone.0200155

Comparative transcriptome analysis provides global insight into gene expression differences between two orchid cultivars
Cited by: 8
Author(s): Jian Yu, Haiyan Song, Jianlin He, Qiang Wang, Jia Liu
Software Mentions: 2
Published: over 6 years ago

10.1128/MRA.00336-21

Draft Genome Sequence of Pandrug-Resistant Pseudomonas aeruginosa SPA03, Isolated from a Patient with Benign Prostatic Hyperplasia
Cited by: 1
Author(s): Pachi Pulusu Chanakya, Balaram Khamari, Manmath Lama, Arun Sai Kumar Peketi, Prakash Kumar, Valakunja Nagaraja, Eswarappa Pradeep Bulagonda
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0029758

Twist1 Directly Regulates Genes That Promote Cell Proliferation and Migration in Developing Heart Valves
Cited by: 40
Author(s): Mary P. Lee, Katherine E. Yutzey
Software Mentions: 2
Published: almost 13 years ago

10.1186/s12896-017-0393-y

Adaptation of the GoldenBraid modular cloning system and creation of a toolkit for the expression of heterologous proteins in yeast mitochondria
Cited by: 32
Author(s): Ana Pérez-González, R. Kniewel, Marcel Veldhuizen, Harshit Verma, Mónica Navarro-Rodríguez, Luis M. Rubio, Elena Caro
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0165374

Antennal Transcriptome and Differential Expression Analysis of Five Chemosensory Gene Families from the Asian Honeybee Apis cerana cerana
Cited by: 19
Author(s): Huiting Zhao, Yali Du, Pengfei Gao, Shujie Wang, Pan JianFang, Yusuo Jiang
Software Mentions: 2
Published: about 8 years ago

10.1371/journal.pone.0005905

Genetic and Proteomic Evidence for Roles of Drosophila SUMO in Cell Cycle Control, Ras Signaling, and Early Pattern Formation
Cited by: 119
Author(s): Minghua Nie, Yongming Xie, Joseph A. Loo, Albert J. Courey
Software Mentions: 2
Published: over 15 years ago

10.3389/fgene.2021.674613

Effect of MAP3K8 on Prognosis and Tumor-Related Inflammation in Renal Clear Cell Carcinoma
Cited by: 6
Author(s): Jiatao Hao, Yumeng Cao, Hui Yu, Lu Zong, Ruifang An, Yan Xue
Software Mentions: 2
Published: about 3 years ago

10.1099/mic.0.041491-0

ccrAB Ent serine recombinase genes are widely distributed in the Enterococcus faecium and Enterococcus casseliflavus species groups and are expressed in E. faecium
Cited by: 9
Author(s): Eva katrin Bjørkeng, Girum Tadesse Tessema, Eirik W. Lundblad, Patrick Butaye, Rob J. L. Willems, Johanna U. Ericson Sollid, Arnfinn Sundsfjord, Kristin Hegstad
Software Mentions: 2
Published: almost 14 years ago

10.1371/journal.pone.0126349

Comprehensive Analysis of a Vibrio parahaemolyticus Strain Extracellular Serine Protease VpSP37
Cited by: 16
Author(s): Monica Salamone, Aldo Nicosia, Carmelo Bennici, Paola Quatrini, Valentina Catania, S. Mazzola, Giulio Ghersi, Angela Cuttitta
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0214335

Asymmetric birth and death of type I and type II MADS-box gene subfamilies in the rubber tree facilitating laticifer development
Cited by: 4
Author(s): Anuwat Kumpeangkeaw, Tan D, Lili Fu, Bingying Han, Xiaoyan Sun, Xiaowen Hu, Zehong Ding, Jiaming Zhang
Software Mentions: 2
Published: over 5 years ago

10.1186/1741-7007-10-84

A spruce gene map infers ancient plant genome reshuffling and subsequent slow evolution in the gymnosperm lineage leading to extant conifers
Cited by: 90
Author(s): Nathalie Pavy, Betty Pelgas, Jérôme Laroche, Philippe Rigault, Nathalie Isabel, Jean Bousquet
Software Mentions: 2
Published: about 12 years ago

10.1186/s12881-018-0722-6

Integrated molecular characterization of adult soft tissue sarcoma for therapeutic targets
Cited by: 16
Author(s): Jihyun Kim, June Hyuk Kim, Hyun Guy Kang, Seog Yun Park, Jung Yeon Yu, Eun Young Lee, Sangwook Oh, Young Ho Kim, Tak Yun, Charny Park, Soo Young Cho, Hye Jin You
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0138768

Berry Phenolic Compounds Increase Expression of Hepatocyte Nuclear Factor-1α (HNF-1α) in Caco-2 and Normal Colon Cells Due to High Affinities with Transcription and Dimerization Domains of HNF-1α
Cited by: 15
Author(s): Luis M. Real Hernandez, Jie Fan, Michelle H. Johnson, Elvira González de Mejía
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0226106

Flax rust infection transcriptomics reveals a transcriptional profile that may be indicative for rust Avr genes
Cited by: 13
Author(s): Wen-Rong Wu, Adnane Nemri, Leila M. Blackman, Ann‐Maree Catanzariti, Jana Sperschneider, Gregory J. Lawrence, Peter N. Dodds, David A. Jones, Adrienne R. Hardham
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0061556

Better Prognosis of Patients with Glioma Expressing FGF2-Dependent PDGFRA Irrespective of Morphological Diagnosis
Cited by: 11
Author(s): Dongfeng Chen, Annette Persson, Yingyu Sun, Leif G. Salford, David Gisselsson Nord, Elisabet Englund, Tao Jiang, Xiaolong Fan
Software Mentions: 2
Published: over 11 years ago

10.1371/journal.pone.0238868

Non-Steroidal Anti-Inflammatory Drugs (NSAIDs): Usage and co-prescription with other potentially interacting drugs in elderly: A cross-sectional study
Cited by: 18
Author(s): Nuru Abdu, Asmerom Mosazghi, Samuel Teweldemedhin, Luwam Asfaha, Makda Teshale, Mikal Kibreab, Indermeet Singh Anand, Eyasu H. Tesfamariam, Mulugeta Russom
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0042490

Gene Profile of Chemokines on Hepatic Stellate Cells of Schistosome-Infected Mice and Antifibrotic Roles of CXCL9/10 on Liver Non-Parenchymal Cells
Cited by: 26
Author(s): Yuejin Liang, Jie Luo, Qiao Lu, Ying Zhou, Hai Wei Wu, Dan Zheng, Yong ya Ren, Ke Sun, Yong Wang, Zhao Song Zhang
Software Mentions: 2
Published: over 12 years ago

10.1186/s12934-020-01500-3

Improved production of germacrene A, a direct precursor of ß-elemene, in engineered Saccharomyces cerevisiae by expressing a cyanobacterial germacrene A synthase
Cited by: 18
Author(s): Weixin Zhang, Junqi Guo, Zheng Wang, Yanwei Li, Xiangfeng Meng, Yu Shen, Weifeng Liu
Software Mentions: 2
Published: almost 4 years ago

10.1186/s12915-021-01039-8

Characterization of a novel type of carbonic anhydrase that acts without metal cofactors
Cited by: 30
Author(s): Yoshihisa Hirakawa, Masuo Senda, Kodai Fukuda, Hong Yang Yu, Masaki Ishida, M. Taira, Kazushi Kinbara, Toshiya Senda
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0003686

Dysregulation of Mitochondrial Dynamics and the Muscle Transcriptome in ICU Patients Suffering from Sepsis Induced Multiple Organ Failure
Cited by: 138
Author(s): Katarina Fredriksson, Inga Tjäder, Pernille Keller, Nataša Petrovič, B. Ahlman, Camilla Schéele, Jan Wernerman, James A. Timmons, Olav Rooyackers
Software Mentions: 2
Published: about 16 years ago

10.1371/journal.pone.0025218

Molecular and Phenotypic Evidence of a New Species of Genus Esox (Esocidae, Esociformes, Actinopterygii): The Southern Pike, Esox flaviae
Cited by: 45
Author(s): Livia Lucentini, Maria Elena Puletti, Claudia Ricciolini, L. Gigliarelli, Diego Fontaneto, Luisa Lanfaloni, Fabiana Bilò, Mauro Natali, Fausto Panara
Software Mentions: 2
Published: almost 13 years ago

10.1371/journal.pone.0183646

Comprehensive analysis of the codon usage patterns in the envelope glycoprotein E2 gene of the classical swine fever virus
Cited by: 8
Author(s): Ye Chen, Xinxin Li, Xiaojuan Chi, Song Wang, Yanmei Ma, Ji‐Long Chen
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0215723

In silico analysis of PFN1 related to amyotrophic lateral sclerosis
Cited by: 9
Author(s): Gabriel Rodrigues Coutinho Pereira, Giovanni Henrique Almeida Silva Tellini, Joelma Freire De Mesquita
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0042263

Mapping Paratope on Antithrombotic Antibody 6B4 to Epitope on Platelet Glycoprotein Ibalpha via Molecular Dynamic Simulations
Cited by: 10
Author(s): Xiang Fang, Ying Fang, Li Liu, Guangjian Liu, Jianhua Wu
Software Mentions: 2
Published: over 12 years ago

10.1186/s12920-019-0594-4

ATXN1 N-terminal region explains the binding differences of wild-type and expanded forms
Cited by: 6
Author(s): Sara Rocha, Jorge Vieira, Noé Vázquez, Hugo López-Fernández, Florentino Fdez-Riverola, Miguel Reboiro-Jato, André D. Sousa, Cristina Vieira
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0185363

Increased cortical porosity and reduced cortical thickness of the proximal femur are associated with nonvertebral fracture independent of Fracture Risk Assessment Tool and Garvan estimates in postmenopausal women
Cited by: 24
Author(s): Rita Kral, Marit Osima, Tove Tveitan Borgen, Roald Vestgaard, Elin Richardsen, Åshild Bjørnerem
Software Mentions: 2
Published: about 7 years ago

10.1186/1471-2105-8-97

MED: a new non-supervised gene prediction algorithm for bacterial and archaeal genomes
Cited by: 42
Author(s): Huaiqiu Zhu, Gangqing Hu, Yifan Yang, Jin Wang, Zhen‐Su She
Software Mentions: 2
Published: over 17 years ago

10.3390/ma14123274

Synthesis, Spectroscopic, and Theoretical Study of Copper and Cobalt Complexes with Dacarbazine
Cited by: 6
Author(s): Grzegorz Świderski, Ryszard Łaźny, Michał Sienkiewicz, Monika Kalinowska, Renata Świsłocka, Ali Osman Acar, Aleksandra Golonko, Marzena Matejczyk, W. Lewandowski
Software Mentions: 2
Published: over 3 years ago

10.18632/aging.103262

Resveratrol promotes osteogenesis and alleviates osteoporosis by inhibiting p53
Cited by: 28
Author(s): Tao Yu, Zaiyan Wang, Xiaomeng You, Haichao Zhou, Wenbao He, Bing Li, Xia Jiang, Hongying Zhu, Youguang Zhao, Guangrong Yu, Yuan Xiong, Yunfeng Yang
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0145191

Warming and Elevated CO2 Interact to Drive Rapid Shifts in Marine Community Production
Cited by: 17
Author(s): Cascade J. B. Sorte, Matthew E. S. Bracken
Software Mentions: 2
Published: almost 9 years ago

10.1371/journal.pone.0018180

Exploring Uncoupling Proteins and Antioxidant Mechanisms under Acute Cold Exposure in Brains of Fish
Cited by: 89
Author(s): Yung‐Che Tseng, Ruo Dong Chen, Magnus Lucassen, Maike Schmidt, Ralf Dringen, Doris Abele, Pung Pung Hwang
Software Mentions: 2
Published: over 13 years ago

10.1186/s12936-019-2770-6

HSP superfamily of genes in the malaria vector Anopheles sinensis: diversity, phylogenetics and association with pyrethroid resistance
Cited by: 10
Author(s): Feng‐Ling Si, Liang Qiao, Qianjun He, Yong Zhou, Zhen‐Tian Yan, Bin Chen
Software Mentions: 2
Published: over 5 years ago

10.3389/fnmol.2020.610090

Identification of MicroRNA–Potassium Channel Messenger RNA Interactions in the Brain of Rats With Post-traumatic Epilepsy
Cited by: 1
Author(s): Li Zheng, Yixun Ma, Fengjuan Zhou, Jia Xiao, Jingjing Zhan, Huachao Tan, Xu Wang, Tiantong Yang, Quan Liu
Software Mentions: 2
Published: almost 4 years ago

10.1186/1471-2105-10-117

Detection and characterization of 3D-signature phosphorylation site motifs and their contribution towards improved phosphorylation site prediction in proteins
Cited by: 65
Author(s): Pawel Durek, Christian Schudoma, Wolfram Weckwerth, Joachim Selbig, Dirk Walther
Software Mentions: 2
Published: over 15 years ago

10.1371/journal.pone.0205043

Can Drosophila melanogaster tell who’s who?
Cited by: 18
Author(s): Jonathan Schneider, Nihal Murali, Graham W. Taylor, Joel D. Levine
Software Mentions: 2
Published: about 6 years ago