cran: vegan | Projects | Ecosyste.ms: Papers

10.1371/journal.pone.0137429

Dysbiosis in the Gut Microbiota of Patients with Multiple Sclerosis, with a Striking Depletion of Species Belonging to Clostridia XIVa and IV Clusters
Cited by: 572
Author(s): Sachiko Miyake, Sangwan Kim, Wataru Suda, Koichiro Oshima, Masakazu Nakamura, Takako Matsuoka, Norio Chihara, Atsuko Tomita, Wakiro Sato, Seok Won Kim, Hidetoshi Morita, Masahira Hattori, Takashi Yamamura
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0097925

The Macroecology of Airborne Pollen in Australian and New Zealand Urban Areas
Cited by: 58
Author(s): Simon Haberle, David M. J. S. Bowman, Rewi M. Newnham, Fay H. Johnston, Paul J. Beggs, Jeroen Buters, Bradley C. Campbell, Bircan Erbas, Ian D. Godwin, Brett J. Green, Alfredo Huete, Alison K. Jaggard, Danielle E. Medek, Frank Murray, Ed Newbigin, M. Thibaudon, Don Vicendese, Grant J. Williamson, Janet M. Davies
Software Mentions: 1
Published: over 12 years ago

10.3389/fmicb.2017.01550

Heat Stress Dictates Microbial Lipid Composition along a Thermal Gradient in Marine Sediments
Cited by: 38
Author(s): Miriam Sollich, Marcos Yukio Yoshinaga, Stefan Häusler, Roy E. Price, Kai‐Uwe Hinrichs, Solveig I Bühring
Software Mentions: 1
Published: about 9 years ago

10.3389/fmicb.2013.00207

Microbial habitat connectivity across spatial scales and hydrothermal temperature gradients at Guaymas Basin
Cited by: 20
Author(s): Stefanie Meyer, Gunter Wegener, Karen G. Lloyd, Andreas Teske, Antje Boetius, Alban Ramette
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0214390

An island of wildlife in a human-dominated landscape: The last fragment of primary forest on the Osa Peninsula’s Golfo Dulce coastline, Costa Rica
Cited by: 6
Author(s): Beatriz Lopez Gutierrez, Angélica M. Almeyda Zambrano, Sandra L. Almeyda Zambrano, C. Gil, Stephanie A. Bohlman, Eduardo Avellan Arias, Guillermo Mulder, Clare N. Ols, Rodolfo Dirzo, Anneke M. DeLuycker, Karen D. Lewis, Eben N. Broadbent
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2018.01230

Time Series Analysis of the Microbiota of Children Suffering From Acute Infectious Diarrhea and Their Recovery After Treatment
Cited by: 28
Author(s): Ener Çağrı Dinleyici, Daniel Martínez-Martínez, Ateş Kara, Adem Karbuz, Nazan Dalgıç, Özge Metin, Ahmet Sami Yazar, Şirin Güven, Zafer Kurugöl, Özden Türel, Mehmet Küçükkoç, Olcay Yasa, Makbule Eren, Metehan Özen, Jose Manuel Martí, Carlos P. Garay, Yvan Vandenplas, Andrés Moya
Software Mentions: 1
Published: about 8 years ago

10.3389/fmicb.2019.00995

Oil Hydrocarbon Degradation by Caspian Sea Microbial Communities
Cited by: 26
Author(s): John I. Miller, Stephen M. Techtmann, Julian L. Fortney, Nagissa Mahmoudi, Dominique C. Joyner, Jiang Liu, Scott W. Olesen, Eric J. Alm, Adolfo Maza, Piero R. Gardinali, Nargiz GaraJayeva, Faig S. Askerov, Terry C. Hazen
Software Mentions: 1
Published: over 7 years ago

10.1007/s11270-015-2338-1

Peatland Microbial Communities as Indicators of the Extreme Atmospheric Dust Deposition
Cited by: 21
Author(s): Barbara Fiałkiewicz-Kozieł, Beata Smieja-Król, T. M. Ostrovnaya, M. V. Frontasyeva, A. Siemińska, Mariusz Lamentowicz
Software Mentions: 1
Published: over 11 years ago

10.1007/s11270-013-1857-x

Nitrogen Deposition Effects on Diatom Communities in Lakes from Three National Parks in Washington State
Cited by: 33
Author(s): Richard W. Sheibley, Mihaela Enache, Peter W. Swarzenski, Patrick Moran, James R. Foreman
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0241371

High nitrogen concentration alter microbial community in Allium fistulosum rhizosphere
Cited by: 10
Author(s): Chen Zhao, Haifeng Ni, Lin Zhao, Lin Zhou, Orlando Borrás‐Hidalgo, Rongzong Cui
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2015.00136

Elevated atmospheric CO2 levels affect community structure of rice root-associated bacteria
Cited by: 37
Author(s): Takashi Okubo, Dongyan Liu, Hirohito Tsurumaru, Seishi Ikeda, Susumu Asakawa, Takeshi Tokida, Kanako Tago, Masahito Hayatsu, Naohiro Aoki, Ken Ishimaru, Kazuhiro Ujiie, Yasuhiro Usui, Hirofumi Nakamura, Hidemitsu Sakai, Kentaro Hayashi, Toshihiro Hasegawa, Kiwamu Minamisawa
Software Mentions: 1
Published: over 11 years ago

10.3389/fmicb.2019.02953

High Diversity and Functional Complementation of Alimentary Canal Microbiota Ensure Small Brown Planthopper to Adapt Different Biogeographic Environments
Cited by: 14
Author(s): Wenwen Liu, Xiaowan Zhang, Nan Wu, Yingdang Ren, Xifeng Wang
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0120608

The Source of the River as a Nursery for Microbial Diversity
Cited by: 42
Author(s): Luiz Felipe Valter de Oliveira, Rogério Margis
Software Mentions: 1
Published: over 11 years ago

10.3389/fmicb.2016.01106

Biogeographic Distribution Patterns of Bacteria in Typical Chinese Forest Soils
Cited by: 70
Author(s): Zongwei Xia, Edith Bai, Qingkui Wang, Decai Gao, Jiang Zhou, Ping Jiang, Jiabing Wu
Software Mentions: 1
Published: about 10 years ago

10.1038/s41598-021-89448-1

Total nitrogen is the main soil property associated with soil fungal community in karst rocky desertification regions in southwest China
Cited by: 6
Author(s): Defeng Qi, Xuwen Wieneke, Peipei Xue, Ling He, Udaya DeSilva
Software Mentions: 1
Published: over 5 years ago

10.3390/v12111293

Significance of Viral Activity for Regulating Heterotrophic Prokaryote Community Dynamics along a Meridional Gradient of Stratification in the Northeast Atlantic Ocean
Cited by: 8
Author(s): Kristina D. A. Mojica, Corina P. D. Brussaard
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0242138

Mycobiome changes in the vitreous of post fever retinitis patients
Cited by: 10
Author(s): Kotakonda Arunasri, Malleswarapu Mahesh, Gumpili Sai Prashanthi, Rajagopalaboopathi Jayasudha, Sama Kalyana Chakravarthy, Mudit Tyagi, Rajeev Reddy Pappuru, Sisinthy Shivaji
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0036290

Individual to Community-Level Faunal Responses to Environmental Change from a Marine Fossil Record of Early Miocene Global Warming
Cited by: 4
Author(s): Christina L. Belanger
Software Mentions: 1
Published: over 14 years ago

10.3389/fmicb.2015.01114

Effects of sludge inoculum and organic feedstock on active microbial communities and methane yield during anaerobic digestion
Cited by: 34
Author(s): David E. Wilkins, Subramanya Rao, Xiaoying Lü, Patrick K. H. Lee
Software Mentions: 1
Published: almost 11 years ago

10.3389/fmicb.2017.00945

Microbial Community and Functional Structure Significantly Varied among Distinct Types of Paddy Soils But Responded Differently along Gradients of Soil Depth Layers
Cited by: 61
Author(s): Ren Yuan Bai, Jun‐Tao Wang, Ye Deng, Ji‐Zheng He, Kai Feng, Limei Zhang
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0184517

Improving the antiprotozoal effect of saponins in the rumen by combination with glycosidase inhibiting iminosugars or by modification of their chemical structure
Cited by: 13
Author(s): E. Ramos-Morales, Gabriel de la Fuente, Robert J. Nash, Radek Bragança, S. Duval, Marc E. Bouillon, Martina Lahmann, C. J. Newbold
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0211718

Genetic dissection of agronomic and quality traits based on association mapping and genomic selection approaches in durum wheat grown in Southern Spain
Cited by: 25
Author(s): Rosa Mérida-García, Guozheng Liu, Sang He, Victoria González-Dugo, Gabriel Dorado, Sergio Gálvez, Ignacio Solís, Pablo J. Zarco‐Tejada, Jochen C. Reif, Pilar Hernández
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0198087

Effects of straw return on bacterial communities in a wheat-maize rotation system in the North China Plain
Cited by: 22
Author(s): Dali Yu, Zhiguo Wen, Xiumei Li, Xiaojun Song, Huijun Wu, Peilong Yang
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2016.01893

Long-Term Application of Bioorganic Fertilizers Improved Soil Biochemical Properties and Microbial Communities of an Apple Orchard Soil
Cited by: 54
Author(s): Lei Wang, Fang Yang, E Yaoyao, Jun Yuan, Waseem Raza, Qiwei Huang, Qirong Shen
Software Mentions: 1
Published: almost 10 years ago

10.3389/fmicb.2020.00628

Early and Short-Term Interventions in the Gut Microbiota Affects Lupus Severity, Progression, and Treatment in MRL/lpr Mice
Cited by: 20
Author(s): Yun Zhang, Qiuping Liu, Yiran Yu, Mingzhu Wang, Chengping Wen, Zhixing He
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2016.01662

Bacterial Communities Associated with Four Cyanobacterial Genera Display Structural and Functional Differences: Evidence from an Experimental Approach
Cited by: 24
Author(s): Lin Zhu, Anouk Zancarini, Imen Louati, Silvia de Cesare, Clément Duval, Kevin Tambosco, Cécile Bernard, Didier Debroas, Lirong Song, Julie Leloup, Jean‐François Humbert
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.pone.0056329

Bacterial Communities Associated with the Leaves and the Roots of Arabidopsis thaliana
Cited by: 588
Author(s): Natacha Bodenhausen, Matthew Horton, Joy Bergelson
Software Mentions: 1
Published: over 13 years ago

10.3389/fmicb.2018.02565

The Effect of Captivity on the Dynamics of Active Bacterial Communities Differs Between Two Deep-Sea Coral Species
Cited by: 18
Author(s): Pierre E. Galand, Leïla Chapron, Anne-Leïla Meistertzheim, Erwan Péru, Franck Lartaud
Software Mentions: 1
Published: almost 8 years ago

10.3389/fmicb.2019.00063

Assessment of the Diversity of Fungal Community Composition Associated With Vachellia pachyceras and Its Rhizosphere Soil From Kuwait Desert
Cited by: 21
Author(s): M. K. Suleiman, Kingsley W. Dixon, Lucy Commander, Paul Nevill, Ali M. Quoreshi, N. R. Bhat, Anitha J. Manuvel, Mini T. Sivadasan
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0120664

Bacterial Communities Associated with Host-Adapted Populations of Pea Aphids Revealed by Deep Sequencing of 16S Ribosomal DNA
Cited by: 106
Author(s): Jean-Pierre Gauthier, Yannick Outreman, Lucie Mieuzet, Jean‐Christophe Simon
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0112465

Estimating the Spatial and Temporal Distribution of Species Richness within Sequoia and Kings Canyon National Parks
Cited by: 3
Author(s): Wathen Steve, James H. Thorne, Andrew Holguin, Mark W. Schwartz
Software Mentions: 1
Published: almost 12 years ago

10.1093/ve/veab055

Phylogenetic analysis of HIV-1 shows frequent cross-country transmission and local population expansions
Cited by: 4
Author(s): Marc Bennedbæk, Anna Zhukova, Man-Hung Eric Tang, J Bennet, Paula Munderi, Kiat Ruxrungtham, Magnus Gisslén, Michael Worobey, Jens D. Lundgren, Rasmus Lykke Marvig
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0199495

Assessment of wild grapevine (Vitis vinifera ssp. sylvestris) chlorotypes and accompanying woody species in the Eastern Adriatic region
Cited by: 9
Author(s): Lukrecija Butorac, Katarina Hančević, Katarina Lukšić, Željko Škvorc, Mario Leko, Erika Maul, Goran Zdunić
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0188409

Patterns and determinants of plant biodiversity in non-commercial forests of eastern China
Cited by: 13
Author(s): Chuping Wu, Mark Vellend, Yuan WeiGao, Bo Jiang, Jiajia Li, Aihua Shen, Jinliang Liu, Jiang Zhu, Mingjian Yu
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0051257

Seasonal Variations Alter the Impact of Functional Traits on Plankton Dynamics
Cited by: 9
Author(s): Marcia Rocha, David A. Vasseur, Ursula Gaedke
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0169079

Habitat Use and Spatial Variability of Hawkfishes with a Focus on Colour Polymorphism in Paracirrhites forsteri
Cited by: 2
Author(s): Darren J. Coker, Veronica Chaidez, Michael L. Berumen
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-021-91195-2

Lung microbiome alterations in NSCLC patients
Cited by: 21
Author(s): Liping Zheng, Ruizheng Sun, Yinghong Zhu, Zheng Li, Xiaoling She, Xingxing Jian, Fenglei Yu, Xueyu Deng, Buqing Sai, Lujuan Wang, Wen Zhou, Minghua Wu, Guiyuan Li, Jingqun Tang, Wei Jia, Juanjuan Xiang
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2018.00634

Urea Amendment Decreases Microbial Diversity and Selects for Specific Nitrifying Strains in Eight Contrasting Agricultural Soils
Cited by: 33
Author(s): Christopher Staley, Florence Breuillin‐Sessoms, Ping Wang, Thomas Kaiser, Rodney T. Venterea, Michael J. Sadowsky
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0142621

Orchid Species Richness along Elevational and Environmental Gradients in Yunnan, China
Cited by: 25
Author(s): Shi‐Bao Zhang, Wen-Yun Chen, Jialin Huang, Yurong Bi, Xuefei Yang
Software Mentions: 1
Published: almost 11 years ago

10.3389/fmicb.2020.565806

Bacterial Community Characteristics and Enzyme Activities in Bothriochloa ischaemum Litter Over Progressive Phytoremediation Years in a Copper Tailings Dam
Cited by: 10
Author(s): Tong Jia, Yuwen Wang, Bo Chai
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2017.00702

Relative Importance of Chemoautotrophy for Primary Production in a Light Exposed Marine Shallow Hydrothermal System
Cited by: 20
Author(s): Gonzalo V. Gomez‐Saez, Petra Pop Ristova, Stefan M. Sievert, Marcus Elvert, Kai‐Uwe Hinrichs, Solveig I Bühring
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0113905

Can Wide Consultation Help with Setting Priorities for Large-Scale Biodiversity Monitoring Programs?
Cited by: 0
Author(s): Frédéric Boivin, Anouk Simard, Pedro R. Peres‐Neto
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0125787

Influence of Edaphic, Climatic, and Agronomic Factors on the Composition and Abundance of Nitrifying Microorganisms in the Rhizosphere of Commercial Olive Crops
Cited by: 32
Author(s): Joan Cáliz, Miguel Montes-Borrego, Xavier Triadó‐Margarit, Madis Metsis, Blanca B. Landa, Emilio O. Casamayor
Software Mentions: 1
Published: over 11 years ago

10.1186/s13567-018-0570-6

Microbial communities and inflammatory response in the endometrium differ between normal and metritic dairy cows at 5–10 days post-partum
Cited by: 29
Author(s): Ron Sicsic, T. Goshen, Rahul Dutta, Noa Kedem-Vaanunu, Veronica Kaplan-Shabtai, Zohar Pasternak, Yuval Gottlieb, Nahum Y. Shpigel, Tal Raz
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0055505

Relationships between Host Phylogeny, Host Type and Bacterial Community Diversity in Cold-Water Coral Reef Sponges
Cited by: 57
Author(s): Sandra Schöttner, Friederike Hoffmann, Paco Cárdenas, Hans Tore Rapp, Antje Boetius, Alban Ramette
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0065735

Habitat Use by Fishes in Coral Reefs, Seagrass Beds and Mangrove Habitats in the Philippines
Cited by: 98
Author(s): Kentaro Honda, Yohei Nakamura, Masahiro Nakaoka, Wilfredo H. Uy, Miguel D. Fortes
Software Mentions: 1
Published: about 13 years ago

10.3389/fmicb.2018.00797

Bacterial Diversity and Nitrogen Utilization Strategies in the Upper Layer of the Northwestern Pacific Ocean
Cited by: 33
Author(s): Yuanyuan Li, Xiao-Huang Chen, Zhang-Xian Xie, Dongxu Li, Pengfei Wu, Ling-Fen Kong, Lin Lin, Shuh‐Ji Kao, Dazhi Wang
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2020.590877

Effect of Menopausal Hormone Therapy on the Vaginal Microbiota and Genitourinary Syndrome of Menopause in Chinese Menopausal Women
Cited by: 7
Author(s): Longlong Geng, Wenjun Huang, Shu‐Heng Jiang, Yiming Zheng, Yuxiao Zhou, Yang Zhou, Jingzhou Hu, Ping Li, Minfang Tao
Software Mentions: 1
Published: almost 6 years ago

10.1007/s00572-018-0859-3

A pulse of summer precipitation after the dry season triggers changes in ectomycorrhizal formation, diversity, and community composition in a Mediterranean forest in California, USA
Cited by: 22
Author(s): Takeshi Taniguchi, Kuni Kitajima, Greg W. Douhan, Norikazu Yamanaka, Michael F. Allen
Software Mentions: 1
Published: about 8 years ago

10.3389/fmicb.2019.02654

Soil Nutrients Drive Function and Composition of phoC-Harboring Bacterial Community in Acidic Soils of Southern China
Cited by: 22
Author(s): Man Man Zheng, Chao Wang, Wen Xing Li, Wen Song, Ren Fang Shen
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0011757

Serpentine Soils Do Not Limit Mycorrhizal Fungal Diversity
Cited by: 42
Author(s): Sara Branco, Richard H. Ree
Software Mentions: 1
Published: about 16 years ago

10.1371/journal.pone.0087115

Gene Duplication and Phenotypic Changes in the Evolution of Mammalian Metabolic Networks
Cited by: 11
Author(s): Michaël Bekaert, Gavin C. Conant
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0045520

High-Density SNP Genotyping of Tomato (Solanum lycopersicum L.) Reveals Patterns of Genetic Variation Due to Breeding
Cited by: 129
Author(s): Sung-Chur Sim, Allen Van Deynze, Karl Stoffel, David S. Douches, Daniel G. Zarka, Martin W. Ganal, Roger T. Chetelat, Samuel F. Hutton, John W. Scott, Richard G. Gardner, Dilip R. Panthee, Martha A. Mutschler, James R. Myers, David M. Francis
Software Mentions: 1
Published: almost 14 years ago

10.1371/journal.pone.0090060

Seasonal Variation in the Fate of Seeds under Contrasting Logging Regimes
Cited by: 14
Author(s): Marina Fleury, Ricardo Ribeiro Rodrigues, Hilton Thadeu Zarate do Couto, Mauro Galetti
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0221102

Diversity and specificity of lipid patterns in basal soil food web resources
Cited by: 18
Author(s): Jakob Kühn, Kathlin Schweitzer, Liliane Rueß
Software Mentions: 1
Published: about 7 years ago

10.3897/mycokeys.62.38923

Diversity and community of culturable endophytic fungi from stems and roots of desert halophytes in northwest China
Cited by: 27
Author(s): Jialong Li, Xiang Sun, Yong Zheng, Pingli Lu, Yong-Long Wang, Liangdong Guo
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0199080

Non-nutritive sweeteners possess a bacteriostatic effect and alter gut microbiota in mice
Cited by: 78
Author(s): Qiao‐Ping Wang, Duncan Browman, Herbert Herzog
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-021-91917-6

Yearly changes in the composition of gut microbiota in the elderly, and the effect of lactobacilli intake on these changes
Cited by: 12
Author(s): Ryuta Amamoto, Kazuhito Shimamoto, Sung Jin Park, Hoshitaka Matsumoto, Kensuke Shimizu, Miyuki Katto, Hirokazu Tsuji, Shigeo Matsubara, Roy J. Shephard, Yukitoshi Aoyagi
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2021.678290

Generalist Taxa Shape Fungal Community Structure in Cropping Ecosystems
Cited by: 3
Author(s): Juntao Wang, Jin-Hui Shen, Limei Zhang, Brajesh K. Singh, Manuel Delgado‐Baquerizo, Hang‐Wei Hu, Lili Han, Wenxue Wei, Yunting Fang, Ji‐Zheng He
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0215741

Synanthropy and diversity of Phlebotominae in an area of intense transmission of visceral leishmaniasis in the South Pantanal floodplain, Midwest Brazil
Cited by: 6
Author(s): Suellem Petilim Gomes Barrios, Luciana Escalante Pereira, Neiva Zandonaide Nazário Monaco, Gustavo Graciolli, Aline Etelvina Casaril, Jucelei de Oliveira Moura Infran, Everton Falcão de Oliveira, Wagner de Souza Fernandes, Antônio Conceição Paranhos Filho, Alessandra Gutierrez de Oliveira
Software Mentions: 1
Published: over 7 years ago

10.3390/toxins11110669

First Detection of Microcystin-LR in the Amazon River at the Drinking Water Treatment Plant of the Municipality of Macapá, Brazil
Cited by: 13
Author(s): Elane Domênica Cunha de Oliveira, Raquel Castelo-Branco, Luis Silva, Natalina Silva, Joana Azevedo, Vı́tor Vasconcelos, Sílvia Maria Mathes Faustino, Alan Cavalcanti da Cunha
Software Mentions: 1
Published: almost 7 years ago

10.3390/toxins12030183

Effects of Microcystin-LR on Metabolic Functions and Structure Succession of Sediment Bacterial Community under Anaerobic Conditions
Cited by: 12
Author(s): Qin Ding, Kai-Yan Liu, Zhiquan Song, Rongli Sun, Juan Zhang, Lihong Yin, Yuepu Pu
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2020.617696

Temporal Characteristics of the Oropharyngeal and Nasal Microbiota Structure in Crewmembers Stayed 180 Days in the Controlled Ecological Life Support System
Cited by: 6
Author(s): Yanwu Chen, Chong Xu, Chong-Fa Zhong, Zhitang Lyu, Junlian Liu, Zhanghuang Chen, Huanhuan Dun, Bingmu Xin, Qiang Xie
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0134623

Secretor Status Is Strongly Associated with Microbial Alterations Observed during Pregnancy
Cited by: 17
Author(s): Himanshu Kumar, Pirjo Wacklin, Massalin Nakphaichit, Eliisa Löyttyniemi, Somak Chowdhury, Yogesh S. Shouche, Jaana Mättö, Erika Isolauri, Seppo Salminen
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0167266

Diversity and Impacts of Mining on the Non-Volant Small Mammal Communities of Two Vegetation Types in the Brazilian Amazon
Cited by: 12
Author(s): Natália Carneiro Ardente, Átilla Colombo Ferreguetti, Donald Gettinger, Pricila Leal, Ana Cristina Mendes‐Oliveira, Fernanda Martins-Hatano, Helena Godoy Bergallo
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.pone.0174235

Asymmetry in dentition and shape of pharyngeal arches in the clonal fish Chrosomus eos-neogaeus: Phenotypic plasticity and developmental instability
Cited by: 7
Author(s): Christelle Leung, Kevin K. Duclos, Thomas Grünbaum, Richard Cloutier, Bernard Angers
Software Mentions: 1
Published: over 9 years ago

10.1186/1750-1326-9-36

Diet and exercise orthogonally alter the gut microbiome and reveal independent associations with anxiety and cognition
Cited by: 237
Author(s): Silvia S. Kang, Patricio Jeraldo, Aishe Kurti, Margret E. Berg Miller, Marc D. Cook, Keith Whitlock, Nigel Goldenfeld, Jeffrey A. Woods, Bryan A. White, Nicholas Chia, John Denis Fryer
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0035472

Sensitivity of Metrics of Phylogenetic Structure to Scale, Source of Data and Species Pool of Hummingbird Assemblages along Elevational Gradients
Cited by: 18
Author(s): Sebastián González‐Caro, Juan L. Parra, Catherine H. Graham, Jimmy A. McGuire, Carlos Daniel Cadena
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0184725

Contaminants of emerging concern in tributaries to the Laurentian Great Lakes: II. Biological consequences of exposure
Cited by: 24
Author(s): Linnea M. Thomas, Zachary G. Jorgenson, Mark E. Brigham, Steven J. Choy, Joseph Moore, Jo A. Banda, Daniel J. Gefell, Thomas Minarik, Heiko L. Schoenfuss
Software Mentions: 1
Published: almost 9 years ago

10.3389/fmicb.2021.693839

Effect of Dietary Amylose/Amylopectin Ratio on Intestinal Health and Cecal Microbes’ Profiles of Weaned Pigs Undergoing Feed Transition or Challenged With Escherichia coli Lipopolysaccharide
Cited by: 6
Author(s): Can Yang, Min Wang, Xian Fa Tang, Huansheng Yang, Fengna Li, Yancan Wang, Jianzhong Li, Yulong Yin
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2015.00115

Proteomic analysis reveals metabolic and regulatory systems involved in the syntrophic and axenic lifestyle of Syntrophomonas wolfei
Cited by: 45
Author(s): Jessica R. Sieber, Bryan R. Crable, Cody S. Sheik, Gregory B. Hurst, Lars Rohlin, Robert P. Gunsalus, Michael J. McInerney
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0118543

Adenovirus and Herpesvirus Diversity in Free-Ranging Great Apes in the Sangha Region of the Republic of Congo
Cited by: 27
Author(s): Tracie A. Seimon, Sarah H. Olson, Kerry Jo Lee, Gail Emilia Rosen, Alain Ondzie, Kenneth Neill Cameron, Patricia Reed, Simon J. Anthony, Damien O. Joly, William B. Karesh, Denise McAloose, W. Ian Lipkin
Software Mentions: 1
Published: over 11 years ago

10.3389/fmicb.2017.01975

Soil Viral Communities Vary Temporally and along a Land Use Transect as Revealed by Virus-Like Particle Counting and a Modified Community Fingerprinting Approach (fRAPD)
Cited by: 41
Author(s): Anja Narr, Ali Nawaz, Lukas Y. Wick, Hauke Harms, Antonis Chatzinotas
Software Mentions: 1
Published: almost 9 years ago

10.3389/fmicb.2019.00760

High Growth Potential of Long-Term Starved Deep Ocean Opportunistic Heterotrophic Bacteria
Cited by: 29
Author(s): Marta Sebastián, Margarita Estrany, Clara Ruiz‐González, Irene Forn, M. Montserrat Sala, Josep M. Gasol, Cèlia Marrasé
Software Mentions: 1
Published: over 7 years ago

10.3390/toxins12090597

The Assessment of Diet Contaminated with Aflatoxin B1 in Juvenile Turbot (Scophthalmus maximus) and the Evaluation of the Efficacy of Mitigation of a Yeast Cell Wall Extract
Cited by: 17
Author(s): Jinzhu Yang, Tiantian Wang, Gang Lin, Mingzhu Li, Ronghua Zhu, Alexandros Yiannikouris, Yanjiao Zhang, Kangsen Mai
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0244817

Host-parasitoid associations in marine planktonic time series: Can metabarcoding help reveal them?
Cited by: 14
Author(s): Laura Käse, Katja Metfies, Stefan Neuhaus, Maarten Boersma, Karen Helen Wiltshire, Alexandra Kraberg
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0113507

Does Forest Continuity Enhance the Resilience of Trees to Environmental Change?
Cited by: 19
Author(s): Goddert von Oheimb, Werner Härdtle, Dieter Eckstein, Hans-Hermann Engelke, Timo Hehnke, Bernd Wagner, Andreas Fichtner
Software Mentions: 1
Published: over 11 years ago

10.1264/jsme2.ME18138

Density and Diversity of Microbial Symbionts under Organic and Conventional Agricultural Management
Cited by: 10
Author(s): Orsolya Gazdag, Ramóna Kovács, István Parádi, Anna Füzy, László Ködöböcz, Márton Mucsi, Tibor Szili‐Kovács, Kazuyuki Inubushi, Tünde Takács
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2020.00750

Impact of Soybean Nodulation Phenotypes and Nitrogen Fertilizer Levels on the Rhizosphere Bacterial Community
Cited by: 14
Author(s): Hao Wang, Chuntao Gu, Xiaofeng Liu, Chunwei Yang, Wenbin Li, Shaodong Wang
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0053350

A Comprehensive Census of Microbial Diversity in Hot Springs of Tengchong, Yunnan Province China Using 16S rRNA Gene Pyrosequencing
Cited by: 182
Author(s): Weiguo Hou, Shang Wang, Hailiang Dong, Hongchen Jiang, Brandon R. Briggs, Joseph P. Peacock, Qiuyuan Huang, Liuqin Huang, Geng Wu, Xiao‐Yang Zhi, Wenjun Li, Jeremy A. Dodsworth, Brian P. Hedlund, Chuanlun Zhang, Hilairy E. Hartnett, Paul Dijkstra, Bruce A. Hungate
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0245965

Genetic diversity of native and cultivated Ugandan Robusta coffee (Coffea canephora Pierre ex A. Froehner): Climate influences, breeding potential and diversity conservation
Cited by: 17
Author(s): Catherine Kiwuka, Eva Goudsmit, Rémi Tournebize, Sinara Oliveira de Aquino, Jacob C. Douma, Laurence Bellanger, Dominique Crouzillat, Piet Stoffelen, Ucu Sumirat, Hyacinthe Legnaté, Pierre Marraccini, Alexandre de Kochko, Alan Carvalho Andrade, John Wasswa Mulumba, Pascal Musoli, Niels P. R. Anten, Valérie Poncet
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2018.00709

Variations of Bacterial Community Diversity Within the Rhizosphere of Three Phylogenetically Related Perennial Shrub Plant Species Across Environmental Gradients
Cited by: 34
Author(s): Xiaofan Na, Tingting Xu, Ming Li, Zhaona Zhou, Shaolan Ma, Jing Wang, Jun He, Bingzhong Jiao, Fei Ma
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2016.00661

Dietary Shifts May Trigger Dysbiosis and Mucous Stools in Giant Pandas (Ailuropoda melanoleuca)
Cited by: 27
Author(s): Candace L. Williams, Kimberly A. Dill‐McFarland, Michael W. Vandewege, Darrell Sparks, Scott T. Willard, Andrew J. Kouba, Garret Suen, A. C. Brown
Software Mentions: 1
Published: over 10 years ago

10.3389/fmicb.2014.00311

A dual-species co-cultivation system to study the interactions between Roseobacters and dinoflagellates
Cited by: 90
Author(s): Hui Wang, Jürgen Tomasch, Michael Jarek, Irene Wagner‐Döbler
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0088746

Genetic Structure and Natal Origins of Immature Hawksbill Turtles (Eretmochelys imbricata) in Brazilian Waters
Cited by: 29
Author(s): Maíra Carneiro Proietti, Júlia Reisser, Luís Fernando Marins, Clara J. Rodríguez-Zárate, Maria Ângela Marcovaldi, Danielle Monteiro, Charitha Pattiaratchi, Eduardo R. Secchi
Software Mentions: 1
Published: over 12 years ago

10.3389/fmolb.2020.00133

An Ancient Residue Metabolomics-Based Method to Distinguish Use of Closely Related Plant Species in Ancient Pipes
Cited by: 7
Author(s): Korey J. Brownstein, Shannon Tushingham, William J. Damitio, Tung T. Nguyen, David R. Gang
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0099838

Individual-Based Ant-Plant Networks: Diurnal-Nocturnal Structure and Species-Area Relationship
Cited by: 65
Author(s): Wesley Dáttilo, Roberth Fagundes, Carlos Augusto Queiroz Gurka, Mara S. A. Silva, Marisa C. L. Vieira, Thiago J. Izzo, Cecilia Díaz‐Castelazo, Kleber Del‐Claro, Víctor Rico-Gray
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0111560

High Abundances of Potentially Active Ammonia-Oxidizing Bacteria and Archaea in Oligotrophic, High-Altitude Lakes of the Sierra Nevada, California, USA
Cited by: 28
Author(s): Curtis J. Hayden, J. Michael Beman
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0125550

Contrasting Diversity and Host Association of Ectomycorrhizal Basidiomycetes versus Root-Associated Ascomycetes in a Dipterocarp Rainforest
Cited by: 21
Author(s): Hirotoshi Sato, Akifumi S. Tanabe, Hirokazu Toju
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0053285

Trustworthy-Looking Face Meets Brown Eyes
Cited by: 62
Author(s): Karel Kleisner, Lenka Příplatová, Peter Fröst, Jaroslav Flegr
Software Mentions: 1
Published: over 13 years ago

10.1186/s40168-017-0245-y

Childhood BMI in relation to microbiota in infancy and lifetime antibiotic use
Cited by: 86
Author(s): Katri Korpela, Maartje A.C. Zijlmans, Mikael Kuitunen, Kaarina Kukkonen, Erkki Savilahti, Anne Salonen, Carolina de Weerth, Willem M. de Vos
Software Mentions: 1
Published: over 9 years ago

10.3389/fnins.2021.619051

APOE-ε4 Carrier Status and Gut Microbiota Dysbiosis in Patients With Alzheimer Disease
Cited by: 25
Author(s): Min Huang, Gaolian Xu, Mao‐Sheng Ran, Wei Luo, Hui Wang
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0103859

Responses of Soil Microbial Communities to Experimental Warming in Alpine Grasslands on the Qinghai-Tibet Plateau
Cited by: 33
Author(s): Bin Zhang, Shengyun Chen, Xingyuan He, Wenjie Liu, Qian Zhao, Lin Zhao, Chunjie Tian
Software Mentions: 1
Published: about 12 years ago

10.3389/fnut.2019.00057

Impact of the Food Additive Titanium Dioxide (E171) on Gut Microbiota-Host Interaction
Cited by: 81
Author(s): Gabriela Veronica Pinget, Jiangning Tan, Bartlomiej Janac, Nadeem O. Kaakoush, Alexandra S. Angelatos, John O’Sullivan, Yen Chin Koay, Frédéric Sierro, Joel Davis, Shiva Kamini Divakarla, Dipesh Khanal, Robert J. Moore, Dragana Stanley, Wojciech Chrzanowski, Laurence Macia
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-021-94557-y

Correlations between environmental salinity levels, blood biochemistry parameters, and steroid hormones in wild juvenile American alligators (Alligator mississippiensis)
Cited by: 1
Author(s): Patricia C. Faulkner, Ruth M. Elsey, David Hala, Lene H. Petersen
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pgen.1004283

A Synthetic Community Approach Reveals Plant Genotypes Affecting the Phyllosphere Microbiota
Cited by: 337
Author(s): Natacha Bodenhausen, Miriam Bortfeld‐Miller, Martin Ackermann, Julia A. Vorholt
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pbio.3001195

Maximizing regional biodiversity requires a mosaic of protection levels
Cited by: 7
Author(s): Nicolas Loiseau, Wilfried Thuiller, Rick D. Stuart‐Smith, Vincent Devictor, Graham Edgar, Laure Velez, Joshua E. Cinner, Nicholas A. J. Graham, Julien Renaud, Andrew S. Hoey, Stéphanie Manel, David Mouillot
Software Mentions: 1
Published: over 5 years ago

10.3389/fped.2021.674716

Low-Dose Antibiotic Prophylaxis Induces Rapid Modifications of the Gut Microbiota in Infants With Vesicoureteral Reflux
Cited by: 8
Author(s): William Morello, Federica D’Amico, Jessica Serafinelli, Silvia Turroni, Isabella Abati, Jessica Fiori, Esra Baskın, Fatoş Yalçınkaya, Augustina Jankauskienė, Marco Pennesi, Aleksandra Żurowska, Francesca Becherucci, Dorota Drożdż, Djalila Mekahli, Grażyna Krzemień, Claudio La Scola, Katarzyna Taranta-Janusz, Otto Mehls, Franz Schaefer, Marco Candela, Giovanni Montini
Software Mentions: 1
Published: about 5 years ago

10.3389/fphar.2020.00955

Simiao Decoction Alleviates Gouty Arthritis by Modulating Proinflammatory Cytokines and the Gut Ecosystem
Cited by: 32
Author(s): Xiaoying Lin, Tiejuan Shao, Lin Huang, Xiaofang Wen, Mingzhu Wang, Chengping Wen, Zhixing He
Software Mentions: 1
Published: about 6 years ago

10.3389/fphar.2021.689092

Structural Characterization of Peptides From Huangjiu and Their Regulation of Hepatic Steatosis and Gut Microbiota Dysbiosis in Hyperlipidemia Mice
Cited by: 15
Author(s): Ying Shi, Ruixue Feng, Jieqi Mao, Shuangping Liu, Zhiping Zhou, Zhongwei Ji, Shuguang Chen, Jian Mao
Software Mentions: 1
Published: about 5 years ago

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Papers Mentioning vegan 6,903