Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: vegan
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/vegan
Community Ecology Package
87 versions
Latest release: about 2 years ago
202 dependent packages
91,351 downloads last month
Papers Mentioning vegan 6,903
10.1186/s13068-018-1111-2
Meta-proteomic analysis of protein expression distinctive to electricity-generating biofilm communities in air-cathode microbial fuel cellsCited by: 11
Author(s): Jeremy Chignell, Susan K. De Long, Kenneth F. Reardon
Software Mentions: 1
Published: over 6 years ago
10.1186/s13068-019-1598-1
Sulfide level in municipal sludge digesters affects microbial community response to long-chain fatty acid loadsCited by: 28
Author(s): Sepehr Shakeri Yekta, Tong Liu, Mette Axelsson Bjerg, Luka Šafarič, Anna Karlsson, Annika Björn, Anna Schnürer
Software Mentions: 1
Published: about 5 years ago
10.3390/insects12020122
Possible Spillover of Pathogens between Bee Communities Foraging on the Same Floral ResourceCited by: 25
Author(s): Anne Dalmon, Virgine Diévart, Maxime Thomasson, Romain Fouque, Bernard Vaissière, Laurent Guilbaud, Yves Le Conte, Mickaël Henry
Software Mentions: 1
Published: almost 4 years ago
10.3390/insects12030261
Small Bait Traps May Not Accurately Reflect the Composition of Necrophagous Diptera Associated to RemainsCited by: 15
Author(s): Kathleen LeBlanc, Denis R. Boudreau, Gaétan Moreau
Software Mentions: 1
Published: over 3 years ago
10.1128/mSystems.00290-20
Exoenzymes as a Signature of Microbial Response to Marine Environmental ConditionsCited by: 13
Author(s): Manoj Kamalanathan, Shawn M. Doyle, Chen Xu, Amanda M. Achberger, Terry L. Wade, Kathleen A. Schwehr, Peter H. Santschi, Jason B. Sylvan, Antonietta Quigg
Software Mentions: 1
Published: over 4 years ago
10.1093/aobpla/plv110
Composition of fungal soil communities varies with plant abundance and geographic originCited by: 12
Author(s): Vanessa Reininger, Laura B. Martínez‐García, Laura A. Sanderson, Pedro M. Antunes
Software Mentions: 1
Published: about 9 years ago
10.3390/insects12050431
Urban Areas Create Refugia for Odonates in a Semi-Arid RegionCited by: 2
Author(s): Danielle M. Husband, Nancy E. McIntyre
Software Mentions: 1
Published: over 3 years ago
10.1155/2020/4637560
Alterations of the Bile Microbiome in Recurrent Common Bile Duct StoneCited by: 5
Author(s): Cheng Ye, Wence Zhou, Hui Zhang, Long Miao, Gen Lv
Software Mentions: 1
Published: about 4 years ago
10.1155/2020/9067821
Oral Supplements of Combined <i>Bacillus licheniformis</i> Zhengchangsheng® and Xylooligosaccharides Improve High-Fat Diet-Induced Obesity and Modulate the Gut Microbiota in RatsCited by: 13
Author(s): Yuyuan Li, Man Liu, He Li, Wei Xin, Xianying Su, Ming Li, Jieli Yuan
Software Mentions: 1
Published: over 4 years ago
10.3390/insects12090797
The Influence of the pH and Salinity of Water in Breeding Sites on the Occurrence and Community Composition of Immature Mosquitoes in the Green Belt of the City of São Paulo, BrazilCited by: 6
Author(s): Laura Cristina Multini, Rafael Oliveira-Christe, Antônio Ralph Medeiros‐Sousa, Eduardo Evangelista, Karolina Morales Barrio-Nuevo, Luís Filipe Mucci, Walter Ceretti-Júnior, Amanda Alves Camargo, André Barretto Bruno Wilke, Mauro Toledo Marrelli
Software Mentions: 1
Published: about 3 years ago
10.1093/aobpla/plaa020
Effect of aridity on species assembly in gypsum drylands: a response mediated by the soil affinity of speciesCited by: 7
Author(s): Arántzazu L. Luzuriaga, Pablo Ferrandis, Joel Flores, Adrián Escudero
Software Mentions: 1
Published: over 4 years ago
10.3390/insects12090777
Effects of Patch Size, Fragmentation, and Invasive Species on Plant and Lepidoptera Communities in Southern TexasCited by: 1
Author(s): James A. Stilley, Christopher A. Gabler
Software Mentions: 1
Published: about 3 years ago
10.1155/2013/406342
A Comparison of Synonymous Codon Usage Bias Patterns in DNA and RNA Virus Genomes: Quantifying the Relative Importance of Mutational Pressure and Natural SelectionCited by: 37
Author(s): Youhua Chen
Software Mentions: 1
Published: almost 12 years ago
10.1155/2018/8412429
Effect of Freeze-Thaw on a Midtemperate Soil Bacterial Community and the Correlation Network of Its MembersCited by: 9
Author(s): Juan Yang, Nan Jiang, Lulu Tian, Xiao Chen, Wei Sun, Lijun Chen
Software Mentions: 1
Published: over 6 years ago
10.1155/2018/9230234
Neutrophilic Asthma Is Associated with Increased Airway Bacterial Burden and Disordered Community CompositionCited by: 50
Author(s): Yu Xu, Haining Li, Qiang Ma, Qiao Zhang, Changzheng Wang
Software Mentions: 1
Published: over 6 years ago
10.3390/biology10060555
Comparison of Diazotrophic Composition and Distribution in the South China Sea and the Western Pacific OceanCited by: 3
Author(s): Chan Ding, Chao Wu, Liuyang Li, Laxman Pujari, Guicheng Zhang, Jun Sun
Software Mentions: 1
Published: over 3 years ago
10.3390/biology10040320
Growth Forms and Functional Guilds Distribution of Soil Fungi in Coastal Versus Inland Sites of Victoria Land, AntarcticaCited by: 9
Author(s): Fabiana Canini, József Geml, Pietro Buzzini, Benedetta Turchetti, Silvano Onofri, Luigi Paolo D’Acqui, Caterina Ripa, Laura Zucconi
Software Mentions: 1
Published: over 3 years ago
10.1111/1365-2656.13056
Prevalence of pelagic dependence among coral reef predators across an atoll seascapeCited by: 13
Author(s): Christina Skinner, Steven P. Newman, Aileen C. Mill, Jason Newton, Nicholas Polunin
Software Mentions: 1
Published: over 5 years ago
10.3390/biology10090942
Analysis of the Microbial Intestinal Tract in Broiler Chickens during the Rearing PeriodCited by: 8
Author(s): Alessandro Stamilla, Susana Ruiz-Ruiz, Alejandro Artacho, Javier Pons, Antonino Messina, Cinzia Lucia Randazzo, Cinzia Caggia, Massimiliano Lanza, Andrés Moya
Software Mentions: 1
Published: about 3 years ago
10.1111/1365-2656.12323
Concomitant predation on parasites is highly variable but constrains the ways in which parasites contribute to food web structureCited by: 27
Author(s): Alyssa R. Cirtwill, Daniel B. Stouffer
Software Mentions: 1
Published: almost 10 years ago
10.2478/s11756-018-0148-9
Impact of troublesome expansive weed Rumex alpinus on species diversity of mountain pastures in Tatra National Park, PolandCited by: 7
Author(s): Anna Delimat, Piotr Kiełtyk
Software Mentions: 1
Published: almost 6 years ago
10.1186/s40104-019-0391-0
Heat stress affects fecal microbial and metabolic alterations of primiparous sows during late gestationCited by: 57
Author(s): HE Jian-xin, Huijuan Guo, Weijiang Zheng, Yongqiang Xue, Ruqian Zhao, Wen Yao
Software Mentions: 1
Published: about 5 years ago
10.1242/bio.013524
Foraging at wastewater treatment works affects brown adipose tissue fatty acid profiles in banana batsCited by: 7
Author(s): Kate Hill, Sunet van Aswegen, M. Corrie Schoeman, Sarina Claassens, Peet Jansen van Rensburg, S. Naidoo, Daléne Vosloo
Software Mentions: 1
Published: almost 9 years ago
10.1186/s40104-019-0413-y
Black soldier fly and gut health in broiler chickens: insights into the relationship between cecal microbiota and intestinal mucin compositionCited by: 46
Author(s): Ilaria Biasato, Ilario Ferrocino, Sihem Dabbou, Rocchina Evangelista, Francesco Gai, Laura Gasco, Luca Simone Cocolin, Maria Teresa Capucchio, Achille Schiavone
Software Mentions: 1
Published: almost 5 years ago
10.1186/s40104-020-00464-z
Dried fruit pomace inclusion in poultry diet: growth performance, intestinal morphology and physiologyCited by: 14
Author(s): Elena Colombino, Ilario Ferrocino, Ilaria Biasato, Luca Simone Cocolin, Daniel Prieto-Botella, Zenon Zduńczyk, Jan Jankowski, Joanna Milala, Monika Kosmala, Bartosz Fotschki, Maria Teresa Capucchio, Jerzy Juśkiewicz
Software Mentions: 1
Published: over 4 years ago
10.1186/s40104-020-00466-x
Effects of dietary Hermetia illucens meal inclusion on cecal microbiota and small intestinal mucin dynamics and infiltration with immune cells of weaned pigletsCited by: 17
Author(s): Ilaria Biasato, Ilario Ferrocino, Elena Colombino, Francesco Gai, Achille Schiavone, Luca Simone Cocolin, V. Vincenti, Maria Teresa Capucchio, Laura Gasco
Software Mentions: 1
Published: over 4 years ago
10.3390/bioengineering2020066
Improved Anaerobic Fermentation of Wheat Straw by Alkaline Pre-Treatment and Addition of Alkali-Tolerant MicroorganismsCited by: 36
Author(s): Heike Sträuber, Franziska Bühligen, Sabine Kleinsteuber, Marcell Nikolausz, Katharina Porsch
Software Mentions: 1
Published: over 9 years ago
10.3897/BDJ.4.e7145
Snake richness in urban forest fragments from Niterói and surroundings, state of Rio de Janeiro, southeastern BrazilCited by: 3
Author(s): Nathalie Citeli, Breno Hamdan, Thaís Guedes
Software Mentions: 1
Published: almost 9 years ago
10.1007/s10811-017-1301-5
The influence of abiotic factors on the bloom-forming alga Ulva flexuosa (Ulvaceae, Chlorophyta): possibilities for the control of the green tides in freshwater ecosystemsCited by: 21
Author(s): Andrzej Rybak, Maciej Gąbka
Software Mentions: 1
Published: about 7 years ago
10.3897/BDJ.9.e65768
Ants of the Palouse Prairie: diversity and species composition in an endangered grasslandCited by: 2
Author(s): Kayla A Dilworth, Marek L. Borowiec, Abigail Cohen, Gabrielle S Mickelson, Liesl C. Oeller, David W. Crowder, Robert E. Clark
Software Mentions: 1
Published: over 3 years ago
10.1186/s12929-017-0349-5
V-J combinations of T-cell receptor predict responses to erythropoietin in end-stage renal disease patientsCited by: 13
Author(s): Henry Sung-Ching Wong, Che‐Mai Chang, Chih-Chin Kao, Yi‐Hsiang Hsu, Lei Xiao, Wen-Chang Chang, Mai‐Szu Wu, Wei‐Chiao Chang
Software Mentions: 1
Published: over 7 years ago
10.3897/BDJ.8.e54333
Finding the forgotten gems: revisiting the butterflies of Matheran after 125 years with introduction to novel colour barcode for depicting seasons and activity of the Indian butterfliesCited by: 2
Author(s): Mandar Sawant, Sagar Sarang, Nikhil Modak
Software Mentions: 1
Published: over 4 years ago
10.1007/s10886-016-0784-x
Species-Specific Cuticular Hydrocarbon Stability within European Myrmica AntsCited by: 32
Author(s): Rhian Guillem, Falko P. Drijfhout, Stephen J. Martin
Software Mentions: 1
Published: about 8 years ago
10.1093/aobpla/plv075
Environmental correlates for tree occurrences, species distribution and richness on a high-elevation tropical islandCited by: 16
Author(s): Philippe Birnbaum, Thomas Ibanez, Robin Pouteau, Hervé Vandrot, Vanessa Héquet, Élodie Blanchard, Tanguy Jaffré
Software Mentions: 1
Published: almost 10 years ago
10.1002/jcla.23363
Rosacea is associated with conjoined interactions between physical barrier of the skin and microorganisms: A pilot studyCited by: 9
Author(s): Chao Yuan, Yafeng Ma, Yinjuan Wang, Xiuli Wang, Chunyan Qian, Didier Hocquet, Shouzhu Zheng, Sophie Mac‐Mary, P. Humbert
Software Mentions: 1
Published: over 4 years ago
10.3390/jcm8030312
Correlations of the Gastric and Duodenal Microbiota with Histological, Endoscopic, and Symptomatic GastritisCited by: 20
Author(s): Hye Seung Han, Sun‐Young Lee, Seo Young Oh, Hee‐Jong Moon, Hyunseok Cho, Jihoon Kim
Software Mentions: 1
Published: over 5 years ago
10.1007/s10531-016-1286-4
Local and landscape scale determinants of macroinvertebrate assemblages and their conservation value in ponds across an urban land-use gradientCited by: 49
Author(s): Ian Thornhill, Lesley Batty, Russell G. Death, Nikolai Friberg, Mark E. Ledger
Software Mentions: 1
Published: almost 8 years ago
10.1007/s10531-016-1191-x
Diet characterisation of solitary bees on farmland: dietary specialisation predicts rarityCited by: 31
Author(s): Thomas J. Wood, John M. Holland, Dave Goulson
Software Mentions: 1
Published: over 8 years ago
10.1038/srep12897
Bacterioplankton community shifts associated with epipelagic and mesopelagic waters in the Southern OceanCited by: 15
Author(s): Yu Zheng, Jun Yang, Lemian Liu, Wenjing Zhang, Stefano Amalfitano
Software Mentions: 1
Published: over 9 years ago
10.1007/s10453-015-9411-5
A 10-year study of Alternaria and Cladosporium in two Polish cities (Szczecin and Cracow) and relationship with the meteorological parametersCited by: 23
Author(s): Agnieszka Grinn‐Gofroń, Agnieszka Strzelczak, Danuta Stępalska, Dorota Myszkowska
Software Mentions: 1
Published: about 9 years ago
10.1038/s41396-021-00932-y
Deep sea sediments associated with cold seeps are a subsurface reservoir of viral diversityCited by: 80
Author(s): Zexin Li, Donald Pan, Guangshan Wei, Wei-Ling Pi, Chuwen Zhang, Jiang-Hai Wang, Yongyi Peng, Lu Zhang, Yong Wang, Claude Hubert, Xiyang Dong
Software Mentions: 1
Published: over 3 years ago
10.1038/srep14266
An integrated insight into the response of sedimentary microbial communities to heavy metal contaminationCited by: 188
Author(s): Huaqun Yin, Jun Niu, Youhua Ren, Jing Cong, Xiaoxia Zhang, Fenliang Fan, Yunhua Xiao, Xian Zhang, Jie Deng, Mao Xie, Zhili He, Jizhong Zhou, Yili Liang, Xueduan Liu
Software Mentions: 1
Published: about 9 years ago
10.1038/srep14316
NMR and MALDI-TOF MS based characterization of exopolysaccharides in anaerobic microbial aggregates from full-scale reactorsCited by: 48
Author(s): G. Gonzalez-Gil, Ludivine Thomas, Abdul‐Hamid Emwas, Piet N.L. Lens, Pascal E. Saikaly
Software Mentions: 1
Published: about 9 years ago
10.1038/srep16328
Global effects of agriculture on fluvial dissolved organic matterCited by: 72
Author(s): Daniel Graeber, Iola G. Boëchat, Francisco Encina‐Montoya, Carlos Esse, Jörg Gelbrecht, Guillermo Goyenola, Björn Gücker, Marlen Heinz, Brian Kronvang, Mariana Meerhoff, Jorge Nimptsch, Martin Pusch, Ricky C. S. Silva, Daniel von Schiller, Elke Zwirnmann
Software Mentions: 1
Published: about 9 years ago
10.1038/srep17043
Beta diversity determinants in Badagongshan, a subtropical forest in central ChinaCited by: 36
Author(s): Xiujuan Qiao, Qianxi Li, Qinghu Jiang, Junmeng Lu, Scott B. Franklin, Zhiyao Tang, Qinggang Wang, Jiaxin Zhang, Zhijun Lu, Bao Di, Yili Guo, Haibo Liu, Yaozhan Xu, Mingxi Jiang
Software Mentions: 1
Published: almost 9 years ago
10.1093/beheco/arx122
A case for considering individual variation in diel activity patternsCited by: 74
Author(s): Anne G. Hertel, Jon E. Swenson, Richard Bischof
Software Mentions: 1
Published: about 7 years ago
10.1038/srep17419
Industrial arsenic contamination causes catastrophic changes in freshwater ecosystemsCited by: 51
Author(s): Guangjie Chen, Haibin Shi, Jianshuang Tao, Li Chen, Yuanyuan Liu, Guoliang Lei, Xiaohai Liu, John P. Smol
Software Mentions: 1
Published: almost 9 years ago
10.1038/srep18165
Archaeal and bacterial communities across a chronosequence of drained lake basins in arctic alaskaCited by: 15
Author(s): Jenny Kao‐Kniffin, Ben J. Woodcroft, Sarah M. Carver, James G. Bockheim, Jo Handelsman, Gene W. Tyson, Kenneth M. Hinkel, Carsten W. Mueller
Software Mentions: 1
Published: almost 9 years ago
10.1038/srep18492
High risk of plant invasion in the understory of eucalypt plantations in South ChinaCited by: 12
Author(s): Dongmei Jin, Yong Huang, Xin Zhou, Bin Chen, Jinshuang Ma, Yue‐Hong Yan
Software Mentions: 1
Published: almost 9 years ago
10.1093/aobpla/plu070
Fine-scale genetic differentiation of a temperate herb: relevance of local environments and demographic changeCited by: 8
Author(s): Yasuhiro Sato, Hiroshi Kudoh
Software Mentions: 1
Published: almost 11 years ago
10.1186/1746-6148-8-76
Correlation among genetic, Euclidean, temporal, and herd ownership distances of porcine reproductive and respiratory syndrome virus strains in Quebec, CanadaCited by: 15
Author(s): Marie-Ève Lambert, Julie Arsenault, Zvonimir Poljak, Sylvie D’Allaire
Software Mentions: 1
Published: almost 13 years ago
10.1186/s12917-020-02732-6
Effect of host breeds on gut microbiome and serum metabolome in meat rabbitsCited by: 18
Author(s): Xiaoxing Ye, Liwen Zhou, Yao Zhang, Shuaishuai Xue, Qian Fu Gan, Shouguo Fang
Software Mentions: 1
Published: almost 4 years ago
10.1038/srep18786
Comparison of bacterial communities of conventional and A-stage activated sludge systemsCited by: 74
Author(s): Alejandro González‐Martínez, Alejandro Rodríguez-Sánchez, Tommaso Lotti, María Jesús García-Ruiz, Francisco Osorio, Jesús González‐López, Mark C.M. van Loosdrecht
Software Mentions: 1
Published: almost 9 years ago
10.1038/srep19071
Invariant community structure of soil bacteria in subtropical coniferous and broadleaved forestsCited by: 16
Author(s): Xiaoli Wang, Xiaoling Wang, Weixin Zhang, Yuanhu Shao, Xiaoming Zou, Tao Liu, Lixia Zhou, Shuang Wan, Xingquan Rao, Zhaojun Li, Shenglei Fu
Software Mentions: 1
Published: almost 9 years ago
10.1038/srep21895
Friend or foe? Biological and ecological traits of the European ash dieback pathogen Hymenoscyphus fraxineus in its native environmentCited by: 73
Author(s): Michelle Cleary, Diem Nguyen, Diana Marčiulynienė, Anna Berlin, Rimvydas Vasaitis, Jan Stenlid
Software Mentions: 1
Published: over 8 years ago
10.1186/s12917-015-0419-4
Characterization of the bacterial gut microbiota of piglets suffering from new neonatal porcine diarrhoeaCited by: 67
Author(s): Marie Louise Hermann-Bank, Kerstin Skovgaard, Anders Stockmarr, Mikael Lenz Strube, Niels Larsen, Hanne Kongsted, Hans-Christian Ingerslev, Lars Mølbak, Mette Boye
Software Mentions: 1
Published: over 9 years ago
10.1038/srep22102
Field trials to evaluate the effects of transgenic cry1Ie maize on the community characteristics of arthropod natural enemiesCited by: 30
Author(s): Jingfei Guo, Kanglai He, Richard L. Hellmich, Shuxiong Bai, Tiantao Zhang, Yun-Jun Liu, Tofael Ahmed, Zhenying Wang
Software Mentions: 1
Published: over 8 years ago
10.1038/srep22399
Root-associated fungi of Vaccinium carlesii in subtropical forests of China: intra- and inter-annual variability and impacts of human disturbancesCited by: 20
Author(s): Yanhua Zhang, Jian Ni, Fangping Tang, Kequan Pei, Yiqi Luo, Lifen Jiang, Lifu Sun, Yu Liang
Software Mentions: 1
Published: over 8 years ago
10.1038/srep22400
Using species distribution modeling to delineate the botanical richness patterns and phytogeographical regions of ChinaCited by: 35
Author(s): Minggang Zhang, J. W. Ferry Slik, Keping Ma
Software Mentions: 1
Published: over 8 years ago
10.1038/srep22943
Preliminary analysis of salivary microbiome and their potential roles in oral lichen planusCited by: 93
Author(s): Kun Wang, Wenxin Lu, Qichao Tu, Yichen Ge, Jinzhi He, Yu Zhou, Yaping Gou, Joy D. Van Nostrand, Yujia Qin, Jiyao Li, Jizhong Zhou, Yan Li, Liying Xiao, Xuedong Zhou
Software Mentions: 1
Published: over 8 years ago
10.1038/srep23045
High phylogenetic diversity is preserved in species-poor high-elevation temperate moth assemblagesCited by: 7
Author(s): Yi Zou, Weiguo Sang, Axel Hausmann, Jan C. Axmacher
Software Mentions: 1
Published: over 8 years ago
10.1038/srep23488
Precipitation shapes communities of arbuscular mycorrhizal fungi in Tibetan alpine steppeCited by: 59
Author(s): Jing Zhang, Fang Wang, Rongxiao Che, Ping Wang, Hanke Liu, Baoming Ji, Xiaoyong Cui
Software Mentions: 1
Published: over 8 years ago
10.1038/srep23745
Analysis of the association between host genetics, smoking, and sputum microbiota in healthy humansCited by: 56
Author(s): Mi Young Lim, Hye-Kyung Yoon, Mina Rho, Joohon Sung, Yun-Mi Song, Kayoung Lee, GwangPyo Ko
Software Mentions: 1
Published: over 8 years ago
10.1038/srep24408
Pollinator responses to floral colour change, nectar and scent promote reproductive fitness in Quisqualis indica (Combretaceae)Cited by: 28
Author(s): Juan Yan, Gang Wang, Yi Sui, Menglin Wang, Ling Zhang
Software Mentions: 1
Published: over 8 years ago
10.1038/srep22006
Unearthing microbial diversity of Taxus rhizosphere via MiSeq high-throughput amplicon sequencing and isolate characterizationCited by: 50
Author(s): Da‐Cheng Hao, Si Meng Song, Jun Mu, Wen Li Hu, Pei Xiao
Software Mentions: 1
Published: over 8 years ago
10.1038/srep24559
Soil ionomic and enzymatic responses and correlations to fertilizations amended with and without organic fertilizer in long-term experimentsCited by: 12
Author(s): Xumeng Feng, Ning Ling, Huan Chen, Chen Zhu, Yinghua Duan, Chang Peng, Guanghui Yu, Ran Wei, Shiwei Guo
Software Mentions: 1
Published: over 8 years ago
10.1038/srep24705
Microbiota-based Signature of Gingivitis Treatments: A Randomized StudyCited by: 27
Author(s): Shi Huang, Zhen Li, Tao He, Cunpei Bo, Jinlan Chang, Lin Li, Yanyan He, Jiquan Liu, Duane Charbonneau, Rui Li, Jian Xu
Software Mentions: 1
Published: over 8 years ago
10.1038/srep25305
Effect of different levels of nitrogen on rhizosphere bacterial community structure in intensive monoculture of greenhouse lettuceCited by: 27
Author(s): Jian Gang Li, Minchong Shen, Jin Feng Hou, Ling Li, Jun Wu, Yuan Dong
Software Mentions: 1
Published: over 8 years ago
10.1038/srep25193
Ecological restoration alters microbial communities in mine tailings profilesCited by: 53
Author(s): Yang Li, Zhongjun Jia, Qiang Sun, Jing Zhan, Yang Yang, Dan Wang
Software Mentions: 1
Published: over 8 years ago
10.1128/mSystems.00475-20
Plant and Soil Development Cooperatively Shaped the Composition of the <i>phoD</i> -Harboring Bacterial Community along the Primary Succession in the Hailuogou Glacier ChronosequenceCited by: 9
Author(s): Yan Bai, Quanju Xiang, Ke Zhao, Xiumei Yu, Qiang Chen, Menggen Ma, Hao Jiang, Xiaoping Zhu, Petri Penttinen, Yunfu Gu
Software Mentions: 1
Published: about 4 years ago
10.1186/s12917-018-1690-y
Modulation of intestinal microbiota, morphology and mucin composition by dietary insect meal inclusion in free-range chickensCited by: 80
Author(s): Ilaria Biasato, Ilario Ferrocino, Elena Biasibetti, Elena Grego, Sihem Dabbou, Alessandra Sereno, Francesco Gai, Laura Gasco, Luca Simone Cocolin, Maria Teresa Capucchio
Software Mentions: 1
Published: almost 6 years ago
10.1038/srep27019
Reduced heterotrophy in the stony coral Galaxea fascicularis after life-long exposure to elevated carbon dioxideCited by: 13
Author(s): Joy N. Smith, Julia Strahl, Sam H. C. Noonan, Gertraud M. Schmidt, Claudio Richter, Katharina Fabricius
Software Mentions: 1
Published: over 8 years ago
10.1038/srep27923
Ecophysiological consequences of alcoholism on human gut microbiota: implications for ethanol-related pathogenesis of colon cancerCited by: 62
Author(s): Atsuki Tsuruya, Akika Kuwahara, Yuta Saito, Haruhiko Yamaguchi, Takahisa Tsubo, Shogo Suga, Makoto Inai, Yosuke Aoki, Shigetoshi Takahashi, Eri Tsutsumi, Yoshihide Suwa, Hidetoshi Morita, Kenji Kinoshita, Yukari Totsuka, Wataru Suda, Koichiro Oshima, Masahira Hattori, Takeshi Mizukami, Akira Yokoyama, Takefumi Shimoyama, Tôru Nakayama
Software Mentions: 1
Published: over 8 years ago
10.1038/srep28235
Nitrogen deposition and management practices increase soil microbial biomass carbon but decrease diversity in Moso bamboo plantationsCited by: 40
Author(s): Li Quan, Xinzhang Song, Hui Gu, Fei Gao
Software Mentions: 1
Published: over 8 years ago
10.1038/srep28257
Multi-targeted metagenetic analysis of the influence of climate and environmental parameters on soil microbial communities along an elevational gradientCited by: 64
Author(s): Anders Lanzén, Lur Epelde, F. Blanco, Iker Martín, Unai Artetxe, Carlos Garbisu
Software Mentions: 1
Published: over 8 years ago
10.1038/srep28158
Rapid differentiation of sexual signals in invasive toads: call variation among populationsCited by: 5
Author(s): Kiyomi Yasumiba, Richard Duffy, Scott A. Parsons, Ross A. Alford, Lin Schwarzkopf
Software Mentions: 1
Published: over 8 years ago
10.1186/1756-0500-5-332
Early development of bacterial community diversity in emergently placed urinary cathetersCited by: 11
Author(s): Betsy Foxman, Jianfeng Wu, Emily C. Farrer, Deborah E. Goldberg, John G. Younger, Chuanwu Xi
Software Mentions: 1
Published: over 12 years ago
10.1038/srep28828
Historical and contemporary factors generate unique butterfly communities on islandsCited by: 29
Author(s): Raluca Vodă, Leonardo Dapporto, Vlad Dincă, Tim G. Shreeve, Mourad Khaldi, Ghania Barech, Khellaf Rebbas, Paul Sammut, Stefano Scalercio, Paul D. N. Hebert, Roger Vila
Software Mentions: 1
Published: over 8 years ago
10.1186/s12890-018-0632-6
The lung microbiome in children with HIV-bronchiectasis: a cross-sectional pilot studyCited by: 6
Author(s): Refiloe Masekela, Solize Vosloo, Stephanus N. Venter, Z. Wilhelm de Beer, Robin J. Green
Software Mentions: 1
Published: over 6 years ago
10.1038/srep28762
DNA barcoding identifies a cosmopolitan diet in the ocean sunfishCited by: 47
Author(s): Lara L. Sousa, Raquel Xavier, Vânia Costa, Nicolas E. Humphries, Clive N. Trueman, Rui Rosa, David Sims, Nuno Queiroz
Software Mentions: 1
Published: over 8 years ago
10.1038/srep29607
Vegetation change impacts on soil organic carbon chemical composition in subtropical forestsCited by: 42
Author(s): Xiaoping Guo, Miaojing Meng, Jinchi Zhang, Han Y. H. Chen
Software Mentions: 1
Published: over 8 years ago
10.1038/srep31312
Environmental selection of planktonic methanogens in permafrost thaw pondsCited by: 22
Author(s): Sophie Crèvecoeur, Warwick F. Vincent, Connie Lovejoy
Software Mentions: 1
Published: over 8 years ago
10.1038/srep31439
Divergent habitat filtering of root and soil fungal communities in temperate beech forestsCited by: 74
Author(s): Kezia Goldmann, Kristina Schröter, Rodica Pena, Ingo Schöning, Marion Schrumpf, François Buscot, Andrea Polle, Tesfaye Wubet
Software Mentions: 1
Published: over 8 years ago
10.1038/srep31913
Forest roadsides harbour less competitive habitats for a relict mountain plant (Pulsatilla vernalis) in lowlandsCited by: 11
Author(s): Katarzyna M. Zielińska, Marcin Kiedrzyński, Andrzej Grzyl, Agnieszka Rewicz
Software Mentions: 1
Published: over 8 years ago
10.1038/srep32858
Fungicidal activities of soil humic/fulvic acids as related to their chemical structures in greenhouse vegetable fields with cultivation chronosequenceCited by: 45
Author(s): Meng Wu, Mengya Song, Ming Liu, Chunyu Jiang, Zhongpei Li
Software Mentions: 1
Published: about 8 years ago
10.1038/srep32655
Characterising the interspecific variations and convergence of gut microbiota in Anseriformes herbivores at wintering areasCited by: 39
Author(s): Yefeng Yang, Ye Deng, Lei Cao
Software Mentions: 1
Published: about 8 years ago
10.1038/srep35046
Consistent responses of the microbial community structure to organic farming along the middle and lower reaches of the Yangtze RiverCited by: 62
Author(s): Wenhui Wang, Wu Hui, Youzhi Feng, Lei Wang, Xiang Xiao, Yunguan Xi, Xue Luo, Run‐Cang Sun, Xianfeng Ye, Yan Huang, Zhengguang Zhang, Zhongli Cui
Software Mentions: 1
Published: about 8 years ago
10.1038/srep35266
Soil microbial C:N ratio is a robust indicator of soil productivity for paddy fieldsCited by: 36
Author(s): Yong Li, Jinshui Wu, Jianlin Shen, Shoulong Liu, Cong Wang, Dan Chen, Tieping Huang, Jiabao Zhang
Software Mentions: 1
Published: about 8 years ago
10.1038/srep35825
Different responses of rhizosphere and non-rhizosphere soil microbial communities to consecutive Piper nigrum L. monocultureCited by: 53
Author(s): Zhigang Li, Chao Zu, Can Wang, Jianfeng Yang, Haijia Yu, Huasong Wu
Software Mentions: 1
Published: about 8 years ago
10.1038/srep36302
Exploring the Influence of Environmental Factors on Bacterial Communities within the Rhizosphere of the Cu-tolerant plant, Elsholtzia splendensCited by: 42
Author(s): Longfei Jiang, Mengke Song, Li Yang, Dayi Zhang, Yingtao Sun, Zhenguo Shen, Gan Zhang
Software Mentions: 1
Published: about 8 years ago
10.1038/srep36101
Sensitive responders among bacterial and fungal microbiome to pyrogenic organic matter (biochar) addition differed greatly between rhizosphere and bulk soilsCited by: 46
Author(s): Zhongmin Dai, Jiajie Hu, Xingkun Xu, Lujun Zhang, Philip C. Brookes, Yan He, Jia‐Zhuang Xu
Software Mentions: 1
Published: about 8 years ago
10.1038/srep36773
Using community analysis to explore bacterial indicators for disease suppression of tobacco bacterial wiltCited by: 71
Author(s): Xiaojiao Liu, Shuting Zhang, Qipeng Jiang, Yani Bai, Guihua Shen, Shili Li, Wei Ding
Software Mentions: 1
Published: about 8 years ago
10.1186/s12887-015-0519-0
Intestinal microbiota composition after antibiotic treatment in early life: the INCA studyCited by: 38
Author(s): Nicole B. Rutten, Ger T. Rijkers, Clemens B. Meijssen, Clarissa E. Crijns, Johanna H. Oudshoorn, Cornelis K. van der Ent, Arine M. Vlieger
Software Mentions: 1
Published: almost 9 years ago
10.3390/antibiotics9030120
Antibiotic Resistance Genes in Antibiotic-Free Chicken FarmsCited by: 12
Author(s): Yuhong Liu, Mike Dyall‐Smith, Marc S. Marenda, Hang‐Wei Hu, Glenn F. Browning, Helen Billman‐Jacobe
Software Mentions: 1
Published: over 4 years ago
10.1038/srep37182
Habitat-driven variation in mycorrhizal communities in the terrestrial orchid genus DactylorhizaCited by: 35
Author(s): Hans Jacquemyn, Michael Waud, Vincent Merckx, Rein Brys, Daniel Tyteca, Mikael Hedrén, Bart Lievens
Software Mentions: 1
Published: almost 8 years ago
10.1186/s12903-021-01425-2
Soft tissue facial changes among adult females during alignment stage of orthodontic treatment: a 3D geometric morphometric studyCited by: 5
Author(s): Si Yu Hou, Wenwen Zhou, Hongwei Dai, Hai Ming Wong, Yi Wen, Jianping Zhou
Software Mentions: 1
Published: almost 4 years ago
10.1038/srep38103
Hydrogen sulfide (H2S) emission control by aerobic sulfate reduction in landfillCited by: 30
Author(s): Long Ye, Fang Yuan, Dongsheng Shen, Huajun Feng, Ting Chen
Software Mentions: 1
Published: almost 8 years ago
10.1038/srep38428
Novel groups and unique distribution of phage phoH genes in paddy waters in northeast ChinaCited by: 11
Author(s): Xinzhen Wang, Junjie Liu, Zhenhua Yu, Jian Jin, Xiaobing Liu
Software Mentions: 1
Published: almost 8 years ago
10.1038/srep38850
Profiling bacterial communities associated with sediment-based aquaculture bioremediation systems under contrasting redox regimesCited by: 33
Author(s): Georgina Robinson, Gary S. Caldwell, Matthew J. Wade, Andrew Free, Clifford L. W. Jones, Selina M. Stead
Software Mentions: 1
Published: almost 8 years ago
10.1038/srep40093
pH is the primary determinant of the bacterial community structure in agricultural soils impacted by polycyclic aromatic hydrocarbon pollutionCited by: 98
Author(s): Yucheng Wu, Jun Zeng, Qihong Zhu, Zhenfa Zhang, Xiangui Lin
Software Mentions: 1
Published: almost 8 years ago