10.3389/fmicb.2018.02345

The Endophytic Mycobiome of European Ash and Sycamore Maple Leaves – Geographic Patterns, Host Specificity and Influence of Ash Dieback
Cited by: 44
Author(s): Markus Schlegel, Valentin Queloz, Thomas N. Sieber
Software Mentions: 4
Published: almost 8 years ago

10.3389/fmicb.2020.00980

Comparison of Bacterial and Fungal Composition and Their Chemical Interaction in Free Tropospheric Air and Snow Over an Entire Winter Season at Mount Sonnblick, Austria
Cited by: 11
Author(s): Nora Els, Marion Greilinger, Michael Reisecker, Romie Tignat-Perrier, Kathrin Baumann‐Stanzer, Anne Kasper-Giebl, Birgit Sattler, Catherine Larose
Software Mentions: 4
Published: over 6 years ago

10.3389/fmicb.2021.658927

Implications of Climate Change: How Does Increased Water Temperature Influence Biofilm and Water Quality of Chlorinated Drinking Water Distribution Systems?
Cited by: 14
Author(s): Carolina Calero Preciado, Joby Boxall, Víctor Soria‐Carrasco, Santiago Martínez, Isabel Douterelo
Software Mentions: 4
Published: over 5 years ago

10.3389/fmicb.2020.00581

The Potato Yam Phyllosphere Ectosymbiont Paraburkholderia sp. Msb3 Is a Potent Growth Promotor in Tomato
Cited by: 16
Author(s): Johannes B Herpell, Florian Schindler, Mersad Bejtović, Lena Fragner, Bocar Diallo, Anke Bellaire, Susanne Kublik, Bärbel U. Foesel, Silvia Gschwendtner, Melina Kerou, Michael Schloter, Wolfram Weckwerth
Software Mentions: 4
Published: over 6 years ago

10.3389/fmicb.2018.00298

Environmental and Host Effects on Skin Bacterial Community Composition in Panamanian Frogs
Cited by: 40
Author(s): Brandon J. Varela, David Lesbarrères, Roberto Ibáñez, David M. Green
Software Mentions: 4
Published: over 8 years ago

10.3389/fmicb.2016.00685

Concentration of Petroleum-Hydrocarbon Contamination Shapes Fungal Endophytic Community Structure in Plant Roots
Cited by: 20
Author(s): Guillaume Bourdel, Alice Roy‐Bolduc, Marc St‐Arnaud, Mohamed Hijri
Software Mentions: 4
Published: over 10 years ago

10.3389/fmicb.2019.00170

Electroactive Bacteria Associated With Stainless Steel Ennoblement in Seawater
Cited by: 18
Author(s): Florian Trigodet, Nicolas Larché, Hilary G. Morrison, Mohamed Jebbar, Dominique Thierry, Loïs Maignien
Software Mentions: 4
Published: over 7 years ago

10.3389/fmicb.2021.675798

Using Plate-Wash PCR and High-Throughput Sequencing to Measure Cultivated Diversity for Natural Product Discovery Efforts
Cited by: 4
Author(s): Emily N. Junkins, Bradley S. Stevenson
Software Mentions: 4
Published: about 5 years ago

10.3389/fvets.2020.00126

Non-invasive Assessment of Fecal Stress Biomarkers in Hunting Dogs During Exercise and at Rest
Cited by: 12
Author(s): Augusta Zannoni, Marco Pietra, Alba Gaspardo, Pier Attilio Accorsi, Monica Barone, Silvia Turroni, Luca Laghi, Chenglin Zhu, Patrizia Brigidi, Monica Forni
Software Mentions: 4
Published: over 6 years ago

10.3389/fvets.2018.00324

Developing Farm-Level Post-vaccination Sero-Monitoring Systems for H5N1 Highly Pathogenic Avian Influenza in an Endemically Infected Country
Cited by: 0
Author(s): Peter A. Durr, Risa Indriani, Paul Selleck, Abdul R M Adjid, Tatty Syafriati, Jagoda Ignjatovic
Software Mentions: 4
Published: over 7 years ago

10.1111/1365-2435.13354

Immune state is associated with natural dietary variation in wild mice<i>Mus musculus domesticus</i>
Cited by: 11
Author(s): Christopher H. Taylor, Stuart Young, Jonathan Fenn, Angela L. Lamb, Ann Lowe, Benoit Poulin, Andrew D. C. MacColl, Janette E. Bradley
Software Mentions: 4
Published: over 7 years ago

10.1111/1365-2435.13028

Habitat heterogeneity induces rapid changes in the feeding behaviour of generalist arthropod predators
Cited by: 42
Author(s): Karin Staudacher, Oskar Rennstam Rubbmark, Klaus Birkhofer, Gerard Malsher, Daniela Sint, Mattias Jonsson, Michael Traugott
Software Mentions: 4
Published: over 8 years ago

10.1534/g3.116.026914

Environmental Association Analyses Identify Candidates for Abiotic Stress Tolerance in<i>Glycine soja</i>, the Wild Progenitor of Cultivated Soybeans
Cited by: 39
Author(s): Justin Anderson, Thomas J. Y. Kono, Robert M. Stupar, Michael B. Kantar, Peter L. Morrell
Software Mentions: 4
Published: over 10 years ago

10.3390/genes8100273

The History of Tree and Shrub Taxa on Bol'shoy Lyakhovsky Island (New Siberian Archipelago) since the Last Interglacial Uncovered by Sedimentary Ancient DNA and Pollen Data
Cited by: 35
Author(s): Heike Zimmermann, Elena Raschke, Laura S. Epp, Kathleen R. Stoof‐Leichsenring, Lutz Schirrmeister, Georg Schwamborn, Ulrike Herzschuh
Software Mentions: 4
Published: almost 9 years ago

10.3390/genes10030233

The Patchy Distribution of Restriction–Modification System Genes and the Conservation of Orphan Methyltransferases in Halobacteria
Cited by: 26
Author(s): Matthew S. Fullmer, Matthew Ouellette, Artemis S. Louyakis, R. Thane Papke, J. Peter Gogarten
Software Mentions: 4
Published: over 7 years ago

10.3390/genes10100823

Dissecting the Genome-Wide Evolution and Function of R2R3-MYB Transcription Factor Family in Rosa chinensis
Cited by: 13
Author(s): Yu Han, Jiayao Yu, Tao Zhao, Tangren Cheng, Jia Wang, Weiru Yang, Huitang Pan, Qixiang Zhang
Software Mentions: 4
Published: almost 7 years ago

10.1186/s13059-020-02007-1

Influenza infection elicits an expansion of gut population of endogenous Bifidobacterium animalis which protects mice against infection
Cited by: 62
Author(s): Qiang Zhang, Jin Hu, Jia-Wu Feng, Xiaoru Hu, Wang Ting, Wenxiao Gong, Kun Huang, Yi-Xiong Guo, Zhong Zou, Xian Lin, Run Zhou, Yuqi Yuan, Anding Zhang, Hong Wei, Gang Cao, Chen Liu, Lingling Chen, Meilin Jin
Software Mentions: 4
Published: over 6 years ago

10.1093/gbe/evz178

Phylogenomics Reveals Clear Cases of Misclassification and Genus-Wide Phylogenetic Markers for Acinetobacter
Cited by: 50
Author(s): Valeria Mateo-Estrada, Lucía Graña-Miraglia, Gamaliel López-Leal, Santiago Castillo-Ramírez
Software Mentions: 4
Published: about 7 years ago

10.1186/s13073-021-00856-4

Trans-ethnic gut microbiota signatures of type 2 diabetes in Denmark and India
Cited by: 29
Author(s): Camila Alvarez-Silva, Alireza Kashani, Torben Hansen, Nishal Kumar Pinna, Ranjit Mohan Anjana, Anirban Dutta, Shruti Saxena, Julie Støy, Ulla Kampmann, Trine Nielsen, Torben Jørgensen, Visvanathan Gnanaprakash, Rameshkumar Gnanavadivel, Sukumaran Aswath, Coimbatore Subramanian Shanthi Rani, Kristine Færch, Venkatesan Radha, Muthuswamy Balasubramanyam, G. Balakrish Nair, Bhabatosh Das, Henrik Vestergaard, Torben Hansen, Sharmila S. Mande, Viswanathan Mohan, Manimozhiyan Arumugam, Oluf Pedersen
Software Mentions: 4
Published: over 5 years ago

10.1093/gigascience/gix058

Connections between the human gut microbiome and gestational diabetes mellitus
Cited by: 178
Author(s): Yashu Kuang, Jinhua Lu, Shenghui Li, Junhua Li, Mingyang Yuan, Jianxing He, Niannian Chen, Wan-Qing Xiao, Shi‐Li Shen, Lan Qiu, Yongming Wu, Cui-Yue Hu, Yanyan Wu, Weidong Li, Qiaozhu Chen, Hong‐Wen Deng, Christopher J. Papasian, Huimin Xia, Xiu Qiu
Software Mentions: 4
Published: about 9 years ago

10.1093/gigascience/gix107

HOMINID: a framework for identifying associations between host genetic variation and microbiome composition
Cited by: 8
Author(s): Joshua Lynch, Karen Tang, Sambhawa Priya, Joanna Sands, Margaret Sands, Evan Tang, Sayan Mukherjee, Dan Knights, Ran Blekhman
Software Mentions: 4
Published: almost 9 years ago

10.1111/gcb.15091

Disentangling the effects of plant species invasion and urban development on arthropod community composition
Cited by: 14
Author(s): Wendy Jesse, Jasper Molleman, Oscar Franken, Mark Lammers, Matty P. Berg, Jocelyn E. Behm, Matthew R. Helmus, Jacintha Ellers
Software Mentions: 4
Published: over 6 years ago

10.1111/gcb.14495

Extreme drought pushes stream invertebrate communities over functional thresholds
Cited by: 65
Author(s): Thomas W. H. Aspin, Kieran Khamis, Thomas J. Matthews, Alexander M. Milner, Matthew J. O’Callaghan, Mark Trimmer, Guy Woodward, Mark E. Ledger
Software Mentions: 4
Published: almost 8 years ago

10.1111/gcb.15439

Nitrogen cycling microbiomes are structured by plant mycorrhizal associations with consequences for nitrogen oxide fluxes in forests
Cited by: 38
Author(s): Ryan M. Mushinski, Zachary Payne, Jonathan D. Raff, Matthew E. Craig, S. E. Pusede, Douglas B. Rusch, Jeffrey R. White, Richard P. Phillips
Software Mentions: 4
Published: almost 6 years ago

10.1080/19490976.2021.1875797

Early life environmental exposures have a minor impact on the gut ecosystem following a natural birth
Cited by: 6
Author(s): Nishat Tasnim, Candice Quin, S K Gill, Chunping Dai, Miranda M. Hart, Deanna L. Gibson
Software Mentions: 4
Published: over 5 years ago

10.1080/19490976.2021.1897209

The high prevalence of <i>Clostridioides difficile</i> among nursing home elders associates with a dysbiotic microbiome
Cited by: 6
Author(s): John P. Haran, Doyle V. Ward, Shakti Bhattarai, Ethan Loew, Protiva Dutta, Amanda Higgins, Beth A. McCormick, Vanni Bucci
Software Mentions: 4
Published: over 5 years ago

10.1080/19490976.2021.1936378

Effect of COVID-19 precautions on the gut microbiota and nosocomial infections
Cited by: 9
Author(s): Armin Rashidi, Maryam Ebadi, Tauseef Ur Rehman, Heba Elhusseini, Harika Nalluri, Thomas Kaiser, Shernan G. Holtan, Alexander Khoruts, Daniel J. Weisdorf, Christopher Staley
Software Mentions: 4
Published: over 5 years ago

10.1038/srep18371

Physiological response to elevated temperature and pCO2 varies across four Pacific coral species: Understanding the unique host+symbiont response
Cited by: 63
Author(s): Kenneth D. Hoadley, D. Tye Pettay, Andréa G. Grottoli, Wei‐Jun Cai, Todd F. Melman, Verena Schoepf, Xinping Hu, Qian Li, Hui Xu, Yongchen Wang, Yohei Matsui, Justin H. Baumann, Mark E. Warner
Software Mentions: 4
Published: almost 11 years ago

10.1038/srep18837

Mineral and organic growing media have distinct community structure, stability and functionality in soilless culture systems
Cited by: 49
Author(s): Oliver Grunert, Emma Hernandez-Sanabria, Ramiro Vílchez-Vargas, Ruy Jáuregui, Dietmar H. Pieper, Maaike Perneel, Marie-Christine Van Labeke, Dirk Reheul, Nico Boon
Software Mentions: 4
Published: over 10 years ago

10.1038/srep18061

Probiotic treatment reduces appetite and glucose level in the zebrafish model
Cited by: 80
Author(s): Silvia Falcinelli, Ana Rodiles, Suraj Unniappan, Simona Picchietti, Giorgia Gioacchini, Daniel L. Merrifield, Oliana Carnevali
Software Mentions: 4
Published: over 10 years ago

10.1038/srep26425

The microbiomes and metagenomes of forest biochars
Cited by: 42
Author(s): Genevieve L. Noyce, C. L. Winsborough, Roberta R. Fulthorpe, Nathan Basiliko
Software Mentions: 4
Published: over 10 years ago

10.1038/srep28484

Multiple sclerosis patients have a distinct gut microbiota compared to healthy controls
Cited by: 587
Author(s): Jun Chen, Nicholas Chia, Krishna R. Kalari, Jingwen Yao, Martina Novotná, M. Mateo Paz Soldán, David Luckey, Eric Marietta, Patricio Jeraldo, Xianfeng Chen, Brian G. Weinshenker, Moses Rodriguez, Orhun H. Kantarci, Heidi Nelson, Joseph A. Murray, Ashutosh K. Mangalam
Software Mentions: 4
Published: about 10 years ago

10.1038/srep33446

Maternal Genetic Ancestry and Legacy of 10th Century AD Hungarians
Cited by: 28
Author(s): Aranka Csősz, Anna Szécsényi-Nagy, Veronika Csákyová, Péter Langó, Viktória Bódis, Kitti Köhler, Gyöngyvér Tömöry, Milan Nagy, Balázs Gusztáv Mende
Software Mentions: 4
Published: about 10 years ago

10.1038/srep35272

Integrated analysis of bacterial and microeukaryotic communities from differentially active mud volcanoes in the Gulf of Cadiz
Cited by: 21
Author(s): Francisco J. R. C. Coelho, António Louvado, Patrícia M. Domingues, Daniel F. R. Cleary, Marina Ferreira, Adelaide Almeida, Ascensão Ravara, Ângela Cunha, Newton C. M. Gomes
Software Mentions: 4
Published: almost 10 years ago

10.1038/srep45840

Microbial Biogeography and Core Microbiota of the Rat Digestive Tract
Cited by: 105
Author(s): Dongyao Li, Haiqin Chen, Bingyong Mao, Qin Yang, Jianxin Zhao, Zhennan Gu, Hao Zhang, Yong Q. Chen, Wei Chen
Software Mentions: 4
Published: over 9 years ago

10.1038/s41598-020-59620-0

Complementary molecular methods reveal comprehensive phylogenetic diversity integrating inconspicuous lineages of early-diverged wood-decaying mushrooms
Cited by: 5
Author(s): Takashi Shirouzu, Shiro Matsuoka, Hideyuki Doi, Nobuaki Nagata, Masayuki Ushio, Kentaro Hosaka
Software Mentions: 4
Published: over 6 years ago

10.1038/s41598-020-60623-0

First evidence of production of the lantibiotic nisin P
Cited by: 29
Author(s): Enriqueta García-Gutiérrez, Paula M. O’Connor, Gerhard Saalbach, Calum J. Walsh, James W. Hegarty, Caitriona M. Guinane, Melinda J. Mayer, Arjan Narbad, Paul D. Cotter
Software Mentions: 4
Published: over 6 years ago

10.1038/s41598-020-60562-w

Disturbance in human gut microbiota networks by parasites and its implications in the incidence of depression
Cited by: 19
Author(s): Elvia Ramírez-Carrillo, Osiris Gaona, Javier Nieto, Andrés Sánchez-Quinto, Daniel Cerqueda‐García, Luisa I. Falcón, Olga A. Rojas-Ramos, Isaac González‐Santoyo
Software Mentions: 4
Published: over 6 years ago

10.1038/s41598-020-61092-1

Tuning up microbiome analysis to monitor WWTPs’ biological reactors functioning
Cited by: 35
Author(s): Miguel de Celis, Ignacio Belda, Rüdiger Ortiz‐Álvarez, Lucía Arregui, Domingo Marquina, Susana Serrano, Andrés de la Oliva Santos
Software Mentions: 4
Published: over 6 years ago

10.1038/s41598-020-61817-2

Blood meal sources and bacterial microbiome diversity in wild-caught tsetse flies
Cited by: 21
Author(s): Alex Kiarie Gaithuma, Junya Yamagishi, Kyoko Hayashida, Nobuyoshi Kawai, Boniface Namangala, Chihiro Sugimoto
Software Mentions: 4
Published: over 6 years ago

10.1038/s41598-020-58942-3

Amplicon sequencing analysis of arbuscular mycorrhizal fungal communities colonizing maize roots in different cover cropping and tillage systems
Cited by: 25
Author(s): Masao Higo, Yuya Tatewaki, Karen Iida, Kana Yokota, Katsunori Isobe
Software Mentions: 4
Published: over 6 years ago

10.1038/s41598-020-62570-2

Scavenging crustacean fauna in the Chilean Patagonian Sea
Cited by: 3
Author(s): Guillermo Figueroa-Muñoz, Marco A. Retamal, Patricio R. De Los Ríos, Carlos Esse, Jorge Pérez-Schultheiss, Rolando Vega-Aguayo, Luz Boyero, Francisco Correa‐Araneda
Software Mentions: 4
Published: over 6 years ago

10.1038/s41598-020-62574-y

Changes in Reef Fish Community Structure Following the Deepwater Horizon Oil Spill
Cited by: 19
Author(s): Justin P. Lewis, Joseph H. Tarnecki, Steven B. Garner, David Chagaris, William F. Patterson
Software Mentions: 4
Published: over 6 years ago

10.1038/s41598-020-63401-0

Bighorn sheep gut microbiomes associate with genetic and spatial structure across a metapopulation
Cited by: 22
Author(s): Claire E. Couch, Holly K. Arnold, Rachel S. Crowhurst, Anna E. Jolles, Thomas J. Sharpton, Marci F. Witczak, Clinton W. Epps, Brianna R. Beechler
Software Mentions: 4
Published: over 6 years ago

10.1038/s41598-020-64570-8

Structure and membership of gut microbial communities in multiple fish cryptic species under potential migratory effects
Cited by: 16
Author(s): My Hanh Le, Daryi Wang
Software Mentions: 4
Published: over 6 years ago

10.1038/s41598-019-54309-5

Root exudate composition of grass and forb species in natural grasslands
Cited by: 38
Author(s): Sophie Dietz, Katharina Herz, Karin Gorzolka, Ute Jandt, Helge Bruelheide, Dierk Scheel
Software Mentions: 4
Published: about 6 years ago

10.1038/s41598-020-68136-6

Effects of substratum and depth on benthic harmful dinoflagellate assemblages
Cited by: 13
Author(s): Li Keat Lee, Zhen Fei Lim, Haifeng Gu, Leo Lai Chan, R. Wayne Litaker, Patricia A. Tester, Chui Pin Leaw, Po Teen Lim
Software Mentions: 4
Published: about 6 years ago

10.1038/s41598-020-68222-9

The implication of metabolically active Vibrio spp. in the digestive tract of Litopenaeus vannamei for its post-larval development
Cited by: 6
Author(s): Estefanía Garibay‐Valdez, Luis Rafael Martínez‐Córdova, Marco Antonio López‐Torres, F.J. Almendáriz-Tapia, Marcel Martínez‐Porchas, Kadiya Calderón
Software Mentions: 4
Published: about 6 years ago

10.1038/s41598-020-67717-9

Diversity of a bacterial community associated with Cliona lobata Hancock and Gelliodes pumila (Lendenfeld, 1887) sponges on the South-East coast of India
Cited by: 5
Author(s): R. Meenatchi, Pownraj Brindangnanam, Saqib Hassan, Rathna Kumarasamy, George Seghal Kiran, Joseph Selvin
Software Mentions: 4
Published: about 6 years ago

10.1038/s41598-020-69602-x

Respiratory microbiota of humpback whales may be reduced in diversity and richness the longer they fast
Cited by: 6
Author(s): Catharina Vendl, Eve Slavich, Bernd Wemheuer, Tiffanie M. Nelson, Belinda C. Ferrari, Torsten Thomas, Tracey L. Rogers
Software Mentions: 4
Published: about 6 years ago

10.1038/s41598-020-69925-9

Comparative assessment of genetic diversity matrices and clustering methods in white Guinea yam (Dioscorea rotundata) based on morphological and molecular markers
Cited by: 27
Author(s): Kwabena Darkwa, Paterne A. Agre, Bunmi Olasanmi, Kazuo Iseki, Ryo Matsumoto, Adrian F. Powell, Guillaume Bauchet, David De Koeyer, Satoru Muranaka, Patrick Adebola, Robert Asiedu, Ryohei Terauchi, Asrat Asfaw
Software Mentions: 4
Published: about 6 years ago

10.1038/s41598-020-70934-x

Urban food subsidies reduce natural food limitations and reproductive costs for a wetland bird
Cited by: 20
Author(s): Betsy A. Evans, Dale E. Gawlik
Software Mentions: 4
Published: about 6 years ago

10.1038/s41598-020-70798-1

Signatures of local adaptation in the spatial genetic structure of the ascidian Pyura chilensis along the southeast Pacific coast
Cited by: 9
Author(s): Nicolás I. Segovia, Claudio A. González‐Wevar, Pilar A. Haye
Software Mentions: 4
Published: about 6 years ago

10.1038/s41598-020-71592-9

Long-term effects of western diet consumption in male and female mice
Cited by: 23
Author(s): Yu Hasegawa, Shin-Yu Chen, Lili Sheng, Prasant Kumar Jena, Karen M. Kalanetra, David A. Mills, Yu Wan, Carolyn M. Slupsky
Software Mentions: 4
Published: about 6 years ago

10.1038/s41598-020-71724-1

Environmental filtering and spillover explain multi-species edge responses across agricultural boundaries in a biosphere reserve
Cited by: 7
Author(s): J. van Schalkwyk, James S. Pryke, Michael J. Samways, René Gaigher
Software Mentions: 4
Published: about 6 years ago

10.1038/s41598-020-71888-w

Local management and landscape structure determine the assemblage patterns of spiders in vegetable fields
Cited by: 11
Author(s): Hafiz Sohaib Ahmed Saqib, Junhui Chen, Wei Chen, Gábor Pozsgai, Komivi Senyo Akutse, Muhammad Furqan Ashraf, Minsheng You, Geoff M. Gurr
Software Mentions: 4
Published: about 6 years ago

10.1038/s41598-020-72035-1

Alteration of salivary microbiome in periodontitis with or without type-2 diabetes mellitus and metformin treatment
Cited by: 43
Author(s): Xiaoyu Sun, Meihui Li, Xia Li, Zhaohui Fang, Yu Shiratsuchi, Jike Gao, Qiang Feng, Pishan Yang
Software Mentions: 4
Published: almost 6 years ago

10.1128/mBio.00916-18

Novel Autotrophic Organisms Contribute Significantly to the Internal Carbon Cycling Potential of a Boreal Lake
Cited by: 13
Author(s): Sari Peura, Moritz Buck, Sanni L. Aalto, Sergio E. Morales, Hannu Nykänen, Alexander Eiler
Software Mentions: 4
Published: about 8 years ago

10.1128/mBio.03281-20

Longitudinal Multi-omics and Microbiome Meta-analysis Identify an Asymptomatic Gingival State That Links Gingivitis, Periodontitis, and Aging
Cited by: 21
Author(s): Shi Huang, Tao He, Yue Feng, Xiang Xu, Lijiang Wang, Pengfei Zhu, Fei Teng, Zheng Sun, Xiaohui Liu, Gongchao Jing, Xiaoquan Su, Lijian Jin, Jiquan Liu, Jian Xu
Software Mentions: 4
Published: over 5 years ago

10.1128/mBio.01451-21

Host Colonization as a Major Evolutionary Force Favoring the Diversity and the Emergence of the Worldwide Multidrug-Resistant <i>Escherichia coli</i> ST131
Cited by: 10
Author(s): Richard Bonnet, Racha Beyrouthy, Marisa Haenni, Marie–Hélène Nicolas–Chanoine, Guillaume Dalmasso, Jean‐Yves Madec
Software Mentions: 4
Published: about 5 years ago

10.1128/mSphere.00560-17

Systematic Bias Introduced by Genomic DNA Template Dilution in 16S rRNA Gene-Targeted Microbiota Profiling in Human Stool Homogenates
Cited by: 17
Author(s): Francesco Multinu, Sean C. Harrington, Jun Chen, Patricio Jeraldo, Stephen Johnson, Nicholas Chia, Marina Walther-Antonio
Software Mentions: 4
Published: over 8 years ago

10.1128/mSphere.00332-18

Tongue Microbiota and Oral Health Status in Community-Dwelling Elderly Adults
Cited by: 66
Author(s): Mikari Asakawa, Toru Takeshita, Michiko Furuta, Shinya Kageyama, Kenji Takeuchi, Jun Hata, Toshiharu Ninomiya, Yoshihisa Yamashita
Software Mentions: 4
Published: about 8 years ago

10.1128/mSphere.00382-18

The Cloacal Microbiome of Five Wild Duck Species Varies by Species and Influenza A Virus Infection Status
Cited by: 22
Author(s): Sarah M. Hird, Holly H. Ganz, Jonathan A. Eisen, Walter M. Boyce
Software Mentions: 4
Published: almost 8 years ago

10.1128/mSphere.00626-18

Decreased Snow Cover Stimulates Under-Ice Primary Producers but Impairs Methanotrophic Capacity
Cited by: 15
Author(s): Sarahi L. Garcia, Anna J. Székely, Christoffer Bergvall, Martha Schattenhofer, Sari Peura
Software Mentions: 4
Published: over 7 years ago

10.1128/mSphere.00088-19

Native and Invading Yellow Starthistle (Centaurea solstitialis) Microbiomes Differ in Composition and Diversity of Bacteria
Cited by: 18
Author(s): Patricia Lu‐Irving, Julia G. Harenčár, Hailey Sounart, Shana R. Welles, Sarah M. Swope, David A. Baltrus, Katrina M. Dlugosch
Software Mentions: 4
Published: over 7 years ago

10.1128/mSphere.00730-19

Gut Microbiomes of the Eastern Oyster ( <i>Crassostrea virginica</i> ) and the Blue Mussel ( <i>Mytilus edulis</i> ): Temporal Variation and the Influence of Marine Aggregate-Associated Microbial Communities
Cited by: 43
Author(s): Melissa L. Pierce, J. Evan Ward
Software Mentions: 4
Published: almost 7 years ago

10.1128/mSphere.00558-19

Age-Related Variation of Bacterial and Fungal Communities in Different Body Habitats across the Young, Elderly, and Centenarians in Sardinia
Cited by: 41
Author(s): Lu Wu, Tiansheng Zeng, Massimo Deligios, Luciano Milanesi, Morgan G. I. Langille, Angelo Zinellu, Salvatore Rubino, Ciriaco Carru, David J. Kelvin
Software Mentions: 4
Published: over 6 years ago

10.1128/mSphere.00451-20

Assessing the Variation within the Oral Microbiome of Healthy Adults
Cited by: 43
Author(s): Jacob T. Nearing, Vanessa DeClercq, Johan Van Limbergen, Morgan G. I. Langille
Software Mentions: 4
Published: almost 6 years ago

10.1128/mSphere.00731-20

Nutrition and the Gut Microbiota in 10- to 18-Month-Old Children Living in Urban Slums of Mumbai, India
Cited by: 20
Author(s): Samantha L Huey, Lingjing Jiang, Marcus W. Fedarko, Daniel McDonald, Cameron Martino, Farhana Ali, David G. Russell, Shobha Udipi, Aparna Thorat, Varsha Thakker, Padmini Ghugre, Ramesh Potdar, Harsha Chopra, Kripa Rajagopalan, Jere D. Haas, Julia L. Finkelstein, Rob Knight, Saurabh Mehta
Software Mentions: 4
Published: almost 6 years ago

10.1128/mSphere.00562-20

Nasal Tissue Extraction Is Essential for Characterization of the Murine Upper Respiratory Tract Microbiota
Cited by: 4
Author(s): L. Patrick Schenck, Joshua J.C. McGrath, Daphnée Lamarche, Martin R. Stämpfli, Dawn M. E. Bowdish, Michael G. Surette
Software Mentions: 4
Published: over 5 years ago

10.1128/mSphere.01237-20

Soil Health Management Enhances Microbial Nitrogen Cycling Capacity and Activity
Cited by: 16
Author(s): Jialin Hu, Virginia L. Jin, Julie Y. M. Konkel, Sean M. Schaeffer, Liesel G Schneider, Jennifer M. DeBruyn
Software Mentions: 4
Published: over 5 years ago

10.1128/mSphere.00936-20

Randomized Controlled Trial of Oral Vancomycin Treatment in Clostridioides difficile-Colonized Patients
Cited by: 18
Author(s): Skye Fishbein, Tiffany Hink, Kimberly A. Reske, Candice Cass, Emily Struttmann, Zainab Hassan Iqbal, Sondra Seiler, Jennie H. Kwon, Carey‐Ann D. Burnham, Gautam Dantas, Erik R. Dubberke
Software Mentions: 4
Published: over 5 years ago

10.1128/mSphere.00227-21

Microbiome Analysis Reveals Diversity and Function of <i>Mollicutes</i> Associated with the Eastern Oyster, <i>Crassostrea virginica</i>
Cited by: 16
Author(s): Zachary T. Pimentel, Keith Dufault‐Thompson, Kayla T. Russo, Abigail K. Scro, Roxanna Smolowitz, Marta Gómez-Chiarri, Ying Zhang
Software Mentions: 4
Published: about 5 years ago

10.1128/mSphere.00525-21

Proteorhodopsin Phototrophy in Antarctic Coastal Waters
Cited by: 2
Author(s): Jerónimo Cifuentes-Anticevic, María E. Alcamán-Arias, Tomás Alarcón-Schumacher, Javier Tamayo-Leiva, Carlos Pedrós-Alió, Laura Farı́as, Beatriz Dı́ez
Software Mentions: 4
Published: about 5 years ago

10.1128/mSystems.00003-16

Differential Functional Constraints Cause Strain-Level Endemism in <i>Polynucleobacter</i> Populations
Cited by: 18
Author(s): Naseer Sangwan, Iratxe Zarraonaindia, Jarrad Hampton-Marcell, Herbert Ssegane, Tifani W. Eshoo, Geeta Rijal, M. Cristina Negri, Jack A. Gilbert
Software Mentions: 4
Published: about 10 years ago

10.1128/mSystems.00211-17

Omics-Based Insights into Flavor Development and Microbial Succession within Surface-Ripened Cheese
Cited by: 55
Author(s): Andrea S. Bertuzzi, Aaron M. Walsh, Jeremiah J. Sheehan, Paul D. Cotter, Fiona Crispie, P.L.H. McSweeney, Kieran N. Kilcawley, Mary C. Rea
Software Mentions: 4
Published: over 8 years ago

10.1128/mSystems.00044-18

A Prospective Metagenomic and Metabolomic Analysis of the Impact of Exercise and/or Whey Protein Supplementation on the Gut Microbiome of Sedentary Adults
Cited by: 127
Author(s): Owen Cronin, Wiley Barton, Peter Skuse, Nicholas Penney, Isabel García-Pérez, Eileen F. Murphy, Trevor Woods, Helena Nugent, Áine Fanning, Silvia Melgar, Éanna Falvey, Elaine Holmes, Paul D. Cotter, Órla O’Sullivan, Michael G. Molloy, Fergus Shanahan
Software Mentions: 4
Published: about 8 years ago

10.1128/mSystems.00038-18

Holistic Assessment of Rumen Microbiome Dynamics through Quantitative Metatranscriptomics Reveals Multifunctional Redundancy during Key Steps of Anaerobic Feed Degradation
Cited by: 66
Author(s): Andrea Söllinger, Alexander Tøsdal Tveit, Morten Poulsen, Samantha Joan Noel, Mia M. Bengtsson, Jörg Bernhardt, Anne Louise Frydendahl Hellwing, Peter Lund, Katharina Riedel, Christa Schleper, Ole Højberg, Tim Urich
Software Mentions: 4
Published: about 8 years ago

10.3390/ijms22073417

Raw Milk-Induced Protection against Food Allergic Symptoms in Mice Is Accompanied by Shifts in Microbial Community Structure
Cited by: 9
Author(s): Suzanne Abbring, Phillip A. Engen, Ankur Naqib, Stefan J. Green, Johan Garssen, Ali Keshavarzian, Betty C.A.M. van Esch
Software Mentions: 4
Published: over 5 years ago

10.18632/oncotarget.12766

Characterization of pancreatic glucagon-producing tumors and pituitary gland tumors in transgenic mice overexpressing<i>MYCN</i>in<i>hGFAP</i>-positive cells
Cited by: 20
Author(s): Kathrin Fielitz, Kristina Althoff, Katleen De Preter, Julie Nonnekens, Jasmin Ohli, Sandra Elges, Wolfgang Hartmann, Günter Klöppel, Thomas Knösel, Marc Schulte, Ludger Klein-Hitpaß, Daniela Beißer, Henning Reis, Annette Eyking, Elke Cario, Johannes H. Schulte, Alexander Schramm, Ulrich Schüller
Software Mentions: 4
Published: almost 10 years ago

10.1093/plankt/fbab033

Key drivers structuring rotifer communities in ponds: insights into an agricultural landscape
Cited by: 10
Author(s): Gabriela Onandía, Sebastian Maassen, Camille Musseau, Stella A. Berger, Carla Olmo, Jonathan M. Jeschke, Gunnar Lischeid
Software Mentions: 4
Published: over 5 years ago

10.1186/s12986-020-00505-4

Oatmeal induced gut microbiota alteration and its relationship with improved lipid profiles: a secondary analysis of a randomized clinical trial
Cited by: 9
Author(s): Mengyao Ye, Jianqin Sun, Yanqiu Chen, Qian Ren, Zhen Li, Ying Zhao, Yue Pan, Huijun Xue
Software Mentions: 4
Published: almost 6 years ago

10.1186/s12986-020-00538-9

Combined Lycium barbarum polysaccharides and C-phycocyanin increase gastric Bifidobacterium relative abundance and protect against gastric ulcer caused by aspirin in rats
Cited by: 14
Author(s): Shu-Yu Hsieh, Yu Lian, I‐Hsuan Lin, Yuxing Yang, Alexey A. Tinkov, Anatoly V. Skalny, Jane C.-J. Chao
Software Mentions: 4
Published: over 5 years ago

10.3390/nu13072467

Gastrointestinal Digestion of a Grape Pomace Extract: Impact on Intestinal Barrier Permeability and Interaction with Gut Microbiome
Cited by: 11
Author(s): Diego Taladrid, Dolores González de Llano, Irene Zorraquín‐Peña, Alba Tamargo, Mariana Silva, Natalia Molinero, M. Victoria Moreno‐Arribas, Begoňa Bartolomé
Software Mentions: 4
Published: about 5 years ago

10.3390/nu12030790

Human Milk Oligosaccharide Profile Variation Throughout Postpartum in Healthy Women in a Brazilian Cohort
Cited by: 39
Author(s): Ana Paula de Lima Ferreira, Ronaldo Alves, Amanda Faria de Figueiredo, Nadya Helena Alves-Santos, Nathalia Freitas-Costa, Mônica Araújo Batalha, Chloe Yonemitsu, Nadia Manivong, Annalee Fürst, Lars Bode, Gilberto Kac
Software Mentions: 4
Published: over 6 years ago

10.3390/nu13051559

Maternal Vegetable and Fruit Consumption during Pregnancy and Its Effects on Infant Gut Microbiome
Cited by: 13
Author(s): Hsien Yu Fan, Yu Tang Tung, Yu Yang, Justin Bo-Kai Hsu, Cheng Yang Lee, Tzu Hao Chang, Emily Chia Yu Su, Rong Hong Hsieh, Yang Ching Chen
Software Mentions: 4
Published: over 5 years ago

10.3390/nu12082414

Impacts of Habitual Diets Intake on Gut Microbial Counts in Healthy Japanese Adults
Cited by: 6
Author(s): T. Sugimoto, Tatsuichiro Shima, Ryuta Amamoto, Chiaki Kaga, Yukiko Kado, Osamu Watanabe, Junko Shiinoki, Kaoru Iwazaki, Hiroko Shigemura, Hirokazu Tsuji, Satoshi Matsumoto
Software Mentions: 4
Published: about 6 years ago

10.3390/nu10050576

Microbiome Responses to an Uncontrolled Short-Term Diet Intervention in the Frame of the Citizen Science Project
Cited by: 92
Author(s): Natalia Klimenko, Alexander V. Tyakht, Anna Popenko, Anatoly S. Vasiliev, Ilya Altukhov, Dimitry D Ischenko, Tatiana I. Shashkova, Daria Efimova, Dimitri A. Nikogosov, Dmitrii A. Osipenko, Sergey Musienko, Kseniya S. Selezneva, Ancha Baranova, Alexander Kurilshikov, Stepan V. Toshchakov, Aleksei A. Korzhenkov, Nazar I. Samarov, Margarita Shevchenko, A.V. Tepliuk, Dmitry Alexeev
Software Mentions: 4
Published: over 8 years ago

10.3390/nu13061937

Characterizing the Effects of Calcium and Prebiotic Fiber on Human Gut Microbiota Composition and Function Using a Randomized Crossover Design—A Feasibility Study
Cited by: 8
Author(s): Lara Yoon, Karin B. Michels
Software Mentions: 4
Published: over 5 years ago

10.3390/nu11051135

Safety of Hyaluronan 35 in Healthy Human Subjects: A Pilot Study
Cited by: 8
Author(s): Annette Bellar, Sean P. Kessler, Dana R. Obery, Naseer Sangwan, Nicole Welch, Laura E. Nagy, Srinivasan Dasarathy, Carol de la Motte
Software Mentions: 4
Published: over 7 years ago

10.3390/nu12113422

PROVIT: Supplementary Probiotic Treatment and Vitamin B7 in Depression—A Randomized Controlled Trial
Cited by: 59
Author(s): Eva Reininghaus, Martina Platzer, Alexandra Kohlhammer-Dohr, Carlo Hamm, Sabrina Mörkl, Susanne Bengesser, Frederike T. Fellendorf, Theressa Lahousen-Luxenberger, Birgitta Leitner-Afschar, Helmut Schöggl, Daniela Amberger-Otti, Walter Wurm, Robert Queissner, Armin Birner, Valerie S Falzberger, Annamaria Painold, Werner Fitz, Jolana Wagner-Skacel, Martina Brunnmayr, Alexandra Rieger, Alexander Maget, Renate Unterweger, Karin Schwalsberger, Bernd Reininghaus, Melanie Lenger, Thomaz F.S. Bastiaanssen, Nina Dalkner
Software Mentions: 4
Published: almost 6 years ago

10.3390/nu13062032

Gut Microbiota Profile and Its Association with Clinical Variables and Dietary Intake in Overweight/Obese and Lean Subjects: A Cross-Sectional Study
Cited by: 60
Author(s): Judit Companys, María José Gosalbes, Laura Pla‐Pagà, Lorena Calderón-Pérez, Elisabet Llauradó, Anna Pedret, Rosa M. Valls, Nuria Jiménez‐Hernández, Berner Andrée Sandoval-Ramírez, Josep Maria del Bas, Antoni Caimari, Laura Rubió, Rosa Solà
Software Mentions: 4
Published: over 5 years ago

10.3390/nu11061425

Mixed Spices at Culinary Doses Have Prebiotic Effects in Healthy Adults: A Pilot Study
Cited by: 24
Author(s): Qing-Yi Lu, Anna Rasmussen, Jieping Yang, Ru-Po Lee, Jianjun Huang, Paul Shao, Catherine L. Carpenter, Irene Gilbuena, Gail Thames, Susanne M. Henning, David Heber, Zhaoping Li
Software Mentions: 4
Published: about 7 years ago

10.3390/nu12113557

High Fat-High Fructose Diet-Induced Changes in the Gut Microbiota Associated with Dyslipidemia in Syrian Hamsters
Cited by: 29
Author(s): Rachael Horne, Yifan Yu, Rianna Zhang, Nyan Abdalqadir, Laura Rossi, Michael G. Surette, Philip M. Sherman, Khosrow Adeli
Software Mentions: 4
Published: almost 6 years ago

10.3390/v10120715

Seasonality Drives Microbial Community Structure, Shaping both Eukaryotic and Prokaryotic Host–Viral Relationships in an Arctic Marine Ecosystem
Cited by: 23
Author(s): Ruth‐Anne Sandaa, Julia E. Storesund, Emily Olesin, Maria Lund Paulsen, Aud Larsen, Gunnar Bratbak, Jessica L. Ray
Software Mentions: 4
Published: almost 8 years ago

10.1186/s12985-019-1211-z

The altered gut virome community in rhesus monkeys is correlated with the gut bacterial microbiome and associated metabolites
Cited by: 9
Author(s): Heng Li, Hongzhe Li, Jingjing Wang, Lei Guo, Haitao Fan, Huiwen Zheng, Zening Yang, Xing Huang, Manman Chu, Fengmei Yang, Zhanlong He, Nan Li, Jun Yang, Qiongwen Wu, Hongzhe Shi, Longding Liu
Software Mentions: 4
Published: about 7 years ago

10.1038/s41598-019-55000-5

Cascading effects of temperature alterations on trophic ecology of European grayling (Thymallus thymallus)
Cited by: 3
Author(s): Szymon Smoliński, Adam Głazaczow
Software Mentions: 4
Published: almost 7 years ago

10.1007/s00442-020-04797-4

Plant invasion impacts on fungal community structure and function depend on soil warming and nitrogen enrichment
Cited by: 21
Author(s): Mark Anthony, Kristina A. Stinson, Jessica A. M. Moore, Serita D. Frey
Software Mentions: 4
Published: almost 6 years ago

10.1073/pnas.2001337117

Natural selection maintains species despite frequent hybridization in the desert shrub <i>Encelia</i>
Cited by: 21
Author(s): Christopher Todd DiVittorio, Sonal Singhal, Adam B. Roddy, Felipe Zapata, David D. Ackerly, Bruce G. Baldwin, Craig R. Brodersen, Alberto Búrquez, Paul V. A. Fine, Mayra Padilla Flores, Elizabeth Solis, Jaime Morales-Villavicencio, David Morales-Arce, Donald W. Kyhos
Software Mentions: 4
Published: almost 6 years ago

10.1016/j.pocean.2018.11.003

Megafaunal variation in the abyssal landscape of the Clarion Clipperton Zone
Cited by: 71
Author(s): Erik Simon-Lledó, Brian J. Bett, Veerle A.I. Huvenne, Timm Schoening, Noëlie M.A. Benoist, Rachel M. Jeffreys, Jennifer M. Durden, Daniel O. B. Jones
Software Mentions: 4
Published: over 7 years ago