cran: tmap | Projects | Ecosyste.ms: Papers

10.1038/s41598-020-74015-x

Rural–urban scaling of age, mortality, crime and property reveals a loss of expected self-similar behaviour
Cited by: 7
Author(s): Jack Sutton, Golnaz Shahtahmassebi, Haroldo V. Ribeiro, Quentin S. Hanley
Software Mentions: 24
Published: about 4 years ago

10.1155/2018/6587049

Data Association Methodology to Improve Spatial Predictions in Alternative Marketing Circuits in Ecuador
Cited by: 1
Author(s): Washington R. Padilla, Juan Francisco Blanco García
Software Mentions: 16
Published: about 6 years ago

10.1371/journal.pone.0253148

Enhancing monitoring of rewilding progress through wildlife tracking and remote sensing
Cited by: 1
Author(s): Julia Carolina Mata, Robert Buitenwerf, Jens‐Christian Svenning
Software Mentions: 13
Published: over 3 years ago

10.1038/s41598-020-70317-2

Seasonal variation in tap water δ2H and δ18O isotopes reveals two tap water worlds
Cited by: 15
Author(s): Ruan De Wet, Adam G. West, Chris Harris
Software Mentions: 12
Published: over 4 years ago

10.3390/tropicalmed6030115

Agro-Environmental Determinants of Leptospirosis: A Retrospective Spatiotemporal Analysis (2004–2014) in Mahasarakham Province (Thailand)
Cited by: 4
Author(s): Jaruwan Viroj, Claude Julien, Claire Lajaunie, Julien Cappelle, Anamika Kritiyakan, Pornsit Thuainan, Worachead Chewnarupai, Sergé Morand
Software Mentions: 11
Published: over 3 years ago

10.1038/s41598-020-68780-y

Protecting endangered species in the USA requires both public and private land conservation
Cited by: 15
Author(s): Niall G. Clancy, John P. Draper, J. Marshall Wolf, Umarfarooq A. Abdulwahab, Maya Pendleton, Soren Brothers, Janice Brahney, Jennifer Weathered, Edd Hammill, Trisha B. Atwood
Software Mentions: 11
Published: over 4 years ago

10.3389/fneur.2019.00743

An Introduction to Software Tools, Data, and Services for Geospatial Analysis of Stroke Services
Cited by: 8
Author(s): Mark Padgham, Geoff Boeing, David Cooley, Nicholas Tierney, Michael Sumner, Thanh G. Phan, Richard Beare
Software Mentions: 11
Published: over 5 years ago

10.3390/ijerph17103383

Bivariate Spatial Pattern between Smoking Prevalence and Lung Cancer Screening in US Counties
Cited by: 9
Author(s): Bian Liu, Jeremy Sze, Lihua Li, Katherine Ornstein, Emanuela Taioli
Software Mentions: 10
Published: over 4 years ago

10.3390/ijerph17218164

Differences in the Estimation of Wildfire-Associated Air Pollution by Satellite Mapping of Smoke Plumes and Ground-Level Monitoring
Cited by: 9
Author(s): Raj P. Fadadu, John R. Balmes, Stephanie M. Holm
Software Mentions: 10
Published: about 4 years ago

10.1186/s13059-021-02316-z

A verified genomic reference sample for assessing performance of cancer panels detecting small variants of low allele frequency
Cited by: 24
Author(s): Wendell Jones, Binsheng Gong, Natalia Novoradovskaya, Dan Li, Rebecca Kusko, Todd Richmond, Donald J. Johann, Halil Bişğin, Sayed Mohammad Ebrahim Sahraeian, Pierre R. Bushel, Mehdi Pirooznia, Katherine Wilkins, Marco Chierici, Wenjun Bao, Lee S Basehore, Anne Bergstrom Lucas, Daniel L. Burgess, Daniel Butler, Simon Cawley, Chia Jung Chang, Guangchun Chen, Tao Chen, Yun Ching Chen, Daniel J. Craig, Ángela del Pozo, Jonathan Foox, Margherita Francescatto, Yutao Fu, Cesare Furlanello, Kristina Giorda, Kira P. Grist, Meijian Guan, You-Zeng Hao, Scott Happe, Gunjan Hariani, Nathan Haseley, Jeff S. Jasper, Giuseppe Jurman, David P. Kreil, Paweł P. Łabaj, Kevin Lai, Jianying Li, Quan Zhen Li, Yulong Li, Chi Kong Li, Zhichao Liu, Mario Solís-López, Kelci Miclaus, Raymond D. Miller, Vinay Kumar Mittal, Marghoob Mohiyuddin, Carlos Pabón-Peña, Barbara L. Parsons, Fujun Qiu, Andreas Scherer, Tieliu Shi, Suzy M. Stiegelmeyer, Chen Suo, Nikola Tom, Dong Wang, Zhining Wen, Leihong Wu, Wenzhong Xiao, Chang Xu, Ying Yu, Jiyang Zhang, Yifan Zhang, Zhihong Zhang, Yuanting Zheng, Christopher E. Mason, James C. Willey, Leming Shi, Joshua Xu
Software Mentions: 10
Published: over 3 years ago

10.3390/microorganisms9091814

Presence of Human Pathogens of the Borrelia burgdorferi sensu lato Complex Shifts the Sequence Read Abundances of Tick Microbiomes in Two German Locations
Cited by: 7
Author(s): Angeline Hoffmann, Thomas Müller, Volker Fingerle, Matthias Noll
Software Mentions: 9
Published: about 3 years ago

10.1016/j.compbiomed.2021.104556

NFnetFu: A novel workflow for microbiome data fusion
Cited by: 3
Author(s): Vartika Bisht, Animesh Acharjee, Georgios V. Gkoutos
Software Mentions: 8
Published: over 3 years ago

10.3390/ijerph18105061

Short-Time Recurrences of Plasmodium vivax Malaria as a Public Health Proxy for Chloroquine-Resistance Surveillance: A Spatio-Temporal Study in the Brazilian Amazon
Cited by: 7
Author(s): Antonio A S Balieiro, André Machado Siqueira, Gisely Cardoso de Melo, Vanderson de Souza Sampaio, Ivo Müeller, Marcus Vinícius Guimarães Lacerda, Daniel Antunes Maciel Villela
Software Mentions: 8
Published: over 3 years ago

10.1038/s41598-021-93874-6

Factors associated with baseline mortality in Norwegian Atlantic salmon farming
Cited by: 26
Author(s): Victor Henrique Silva de Oliveira, Katharine R. Dean, Lars Qviller, Carsten Kirkeby, Bogi Bech Jensen
Software Mentions: 8
Published: over 3 years ago

10.1016/S2542-5196(21)00030-9

Identifying urban hotspots of dengue, chikungunya, and Zika transmission in Mexico to support risk stratification efforts: a spatial analysis
Cited by: 28
Author(s): Felipe Dzul-Manzanilla, Fabián Correa-Morales, Azael Che-Mendoza, Jorge Palacio-Vargas, Gustavo Sánchez-Tejeda, Jesús Felipe González-Roldán, Hugo López‐Gatell, Adriana E. Flores-Suárez, Héctor Gómez–Dantés, Giovanini Evelim Coelho, Haroldo Sergio da Silva Bezerra, Norma Pavía-Ruz, Audrey Lenhart, Pablo Manrique-Saide, Gonzalo M. Vázquez-Prokopec
Software Mentions: 8
Published: over 3 years ago

10.1371/journal.pone.0211350

Correlated impulses: Using Facebook interests to improve predictions of crime rates in urban areas
Cited by: 8
Author(s): Masoomali Fatehkia, Dan O’Brien, Ingmar Weber
Software Mentions: 8
Published: almost 6 years ago

10.1038/s41598-021-95302-1

The implications of lag times between nitrate leaching losses and riverine loads for water quality policy
Cited by: 12
Author(s): R. W. McDowell, Zachary P. Simpson, Anne-Gäelle Ausseil, Z. Etheridge, Richard M. Law
Software Mentions: 7
Published: over 3 years ago

10.3390/ijms22136726

Analysis of the Role of FRMD5 in the Biology of Papillary Thyroid Carcinoma
Cited by: 4
Author(s): Agata M. Gaweł, Maciej Ratajczak, Ewa Gajda, Małgorzata Grzanka, Agnieszka Paziewska, Marta Cieślicka, Maria Kulecka, Małgorzata Oczko-Wojciechowska, Marlena Godlewska
Software Mentions: 7
Published: over 3 years ago

10.1038/s41598-021-87577-1

Cetacean distribution models based on visual and passive acoustic data
Cited by: 11
Author(s): Kaitlin E. Frasier, Lance P. Garrison, Melissa S. Soldevilla, Sean M. Wiggins, John A. Hildebrand
Software Mentions: 7
Published: over 3 years ago

10.3390/e22090937

belg: A Tool for Calculating Boltzmann Entropy of Landscape Gradients
Cited by: 7
Author(s): Jakub Nowosad, Peichao Gao
Software Mentions: 6
Published: about 4 years ago

10.1017/S0950268821000510

Epidemiology and transmission characteristics of early COVID-19 cases, 20 January–19 March 2020, in Bavaria, Germany
Cited by: 10
Author(s): Stefanie Böhm, Tom Woudenberg, D. Chen, Durdica Marosevic, Merle M. Böhmer, Lisa Hansen, Jacco Wallinga, Andreas Sing, Katharina Katz
Software Mentions: 6
Published: almost 4 years ago

10.1186/s13059-019-1871-4

tmap: an integrative framework based on topological data analysis for population-scale microbiome stratification and association studies
Cited by: 17
Author(s): Tianhua Liao, Yuchen Wei, Mingjing Luo, Guoping Zhao, Haokui Zhou
Software Mentions: 6
Published: almost 5 years ago

10.3390/ijerph17072593

Census Demographics and Chlorpyrifos Use in California’s Central Valley, 2011–15: A Distributional Environmental Justice Analysis
Cited by: 6
Author(s): Daniel J. Hicks
Software Mentions: 6
Published: over 4 years ago

10.1038/s41598-017-08094-8

CD24 induces changes to the surface receptors of B cell microvesicles with variable effects on their RNA and protein cargo
Cited by: 14
Author(s): D. Craig Ayre, Ian C. Chute, Andrew P. Joy, David A. Barnett, Andrew M. Hogan, Marc P. Grüll, Lourdes Peña‐Castillo, Andrew S. Lang, Stephen M. Lewis, Sherri L. Christian
Software Mentions: 5
Published: over 7 years ago

10.1186/1471-2164-10-22

BioMart – biological queries made easy
Cited by: 718
Author(s): Damian Smedley, Syed Haider, Benoît Ballester, Richard Holland, Darin London, Guðmundur Á. Þórisson, Arek Kasprzyk
Software Mentions: 5
Published: almost 16 years ago

10.1371/journal.pntd.0008411

Modelling geospatial distributions of the triatomine vectors of Trypanosoma cruzi in Latin America
Cited by: 11
Author(s): Andreas Bender, André Python, Steve W. Lindsay, Nick Golding, Catherine L. Moyes
Software Mentions: 5
Published: over 4 years ago

10.1371/journal.pone.0245697

Wheat rust epidemics damage Ethiopian wheat production: A decade of field disease surveillance reveals national-scale trends in past outbreaks
Cited by: 7
Author(s): Marion Meyer, Netsanet Bacha, Tilahun Tadesse, Yoseph Alemayehu, Endale Hailu Abera, Bekele Hundie, Getaneh Woldeab, Bedada Girma, Ashenafi Gemechu, Tamirat Negash, Tamene Mideksa, Jacob W. Smith, Moti Jaleta, David Hodson, Christopher A. Gilligan
Software Mentions: 5
Published: almost 4 years ago

10.3389/frai.2021.680564

Topological Data Analysis Highlights Novel Geographical Signatures of the Human Gut Microbiome
Cited by: 3
Author(s): Eva Lymberopoulos, Giorgia Isabella Gentili, Muhannad Alomari, Nikhil Sharma
Software Mentions: 5
Published: over 3 years ago

10.3390/healthcare9010022

Models for Heart Failure Admissions and Admission Rates, 2016 through 2018
Cited by: 4
Author(s): Clemens Scott Kruse, Brad Beauvais, Matthew Brooks, Michael Mileski, Lawrence V. Fulton
Software Mentions: 5
Published: almost 4 years ago

10.1038/s41598-021-82145-z

Social media reveal ecoregional variation in how weather influences visitor behavior in U.S. National Park Service units
Cited by: 18
Author(s): Emily J. Wilkins, Peter D. Howe, Jordan W. Smith
Software Mentions: 5
Published: almost 4 years ago

10.3390/ijerph16203969

Socio-Economic and Environmental Factors Related to Spatial Differences in Human Non-Tuberculous Mycobacterial Diseases in the Czech Republic
Cited by: 15
Author(s): Helena Modrá, Vít Ulmann, Jan Caha, Dana Hübelová, Ondřej Konečný, Jana Svobodová, Ross Tim Weston, Ivo Pavlík
Software Mentions: 5
Published: about 5 years ago

10.1186/s12885-020-07716-1

The R-enantiomer of ketorolac reduces ovarian cancer tumor burden in vivo
Cited by: 10
Author(s): Martha M. Grimes, S. Ray Kenney, Dayna Dominguez, Kathryn J. Brayer, Yi Guo, Angela Wandinger‐Ness, Laurie G. Hudson
Software Mentions: 4
Published: almost 4 years ago

10.3389/fpls.2017.02055

Diurnal Transcriptome and Gene Network Represented through Sparse Modeling in Brachypodium distachyon
Cited by: 18
Author(s): Satoru Koda, Yoshihiko Onda, Hidetoshi Matsui, Kotaro Takahagi, Yukiko Yamaguchi-Uehara, Minami Shimizu, Komaki Inoue, Takuhiro Yoshida, Tetsuya Sakurai, Hiroshi Honda, Shinto Eguchi, Ryuei Nishii, Keiichi Mochida
Software Mentions: 4
Published: almost 7 years ago

10.2471/BLT.20.264044

Impact of COVID-19 response on global surgical volumes: an ongoing observational study
Cited by: 17
Author(s): Vikas N O’Reilly-Shah, Wil Van Cleve, David P. Long, Vanessa Moll, Faye M. Evans, Jacob Sunshine, Nicholas J Kassebaum, Ewen M Harrison, Craig S. Jabaley
Software Mentions: 4
Published: about 4 years ago

10.1371/journal.pcbi.1003031

Shining a Light on Dark Sequencing: Characterising Errors in Ion Torrent PGM Data
Cited by: 255
Author(s): Lauren M. Bragg, Graham N. Stone, Margaret K. Butler, Philip Hugenholtz, Gene W. Tyson
Software Mentions: 4
Published: over 11 years ago

10.1371/journal.pone.0235009

Identifying hotspots of cardiometabolic outcomes based on a Bayesian approach: The example of Chile
Cited by: 3
Author(s): Gloria Aguayo, Anna Schritz, María Ruiz-Castell, Luís Villarroel, Gonzalo Valdívia, Guy Fagherazzi, Daniel R. Witte, Andrew Lawson
Software Mentions: 4
Published: over 4 years ago

10.1371/journal.pone.0160227

Analysis and Visualization Tool for Targeted Amplicon Bisulfite Sequencing on Ion Torrent Sequencers
Cited by: 19
Author(s): Stephan Pabinger, Karina Ernst, Walter Pulverer, Rainer Kallmeyer, Ana M. Valdes, Sarah Metrustry, Denis Katic, Angelo Nuzzo, Albert Kriegner, Klemens Vierlinger, Andreas Weinhaeusel
Software Mentions: 4
Published: over 8 years ago

10.1371/journal.pone.0067539

Choosing a Benchtop Sequencing Machine to Characterise Helicobacter pylori Genomes
Cited by: 25
Author(s): Timothy T. Perkins, Chin Yen Tay, Fanny Thirriot, Barry J. Marshall
Software Mentions: 4
Published: over 11 years ago

10.1038/s41598-021-81329-x

Spatiotemporal clustering and Random Forest models to identify risk factors of African swine fever outbreak in Romania in 2018–2019
Cited by: 20
Author(s): Mathieu Andraud, Stéphanie Bougeard, Theodora Chesnoiu, Nicolas Rose
Software Mentions: 4
Published: almost 4 years ago

10.1371/journal.pntd.0008233

The estimated burden of scrub typhus in Thailand from national surveillance data (2003-2018)
Cited by: 24
Author(s): Tri Wangrangsimakul, Ivo Elliott, Supalert Nedsuwan, Rawadee Kumlert, Soawapak Hinjoy, Kittipong Chaisiri, Nicholas P. J. Day, Sergé Morand
Software Mentions: 4
Published: over 4 years ago

10.3390/cancers13061409

Detection of Genomically Aberrant Cells within Circulating Tumor Microemboli (CTMs) Isolated from Early-Stage Breast Cancer Patients
Cited by: 8
Author(s): M. Silvestri, Carolina Reduzzi, Giancarlo Feliciello, Marta Vismara, Thomas Schamberger, Cäcilia Köstler, Rosita Motta, Stefano Calza, Cristina Ferraris, Andrea Vingiani, Giancarlo Pruneri, Maria Grazia Daidone, Christoph Klein, Bernhard Polzer, Vera Cappelletti
Software Mentions: 4
Published: over 3 years ago

10.1186/s12889-020-09771-6

Assessing the geographical distribution of comorbidity among commercially insured individuals in South Africa
Cited by: 3
Author(s): Cristina Mannie, Hadi Kharrazi
Software Mentions: 4
Published: about 4 years ago

10.1371/journal.pone.0067744

Towards Clinical Molecular Diagnosis of Inherited Cardiac Conditions: A Comparison of Bench-Top Genome DNA Sequencers
Cited by: 53
Author(s): Xinzhong Li, Andrew J. Buckton, S. Wilkinson, Shibu John, Roddy Walsh, Tomáš Novotný, Iveta Valášková, Manu Gupta, Laurence Gamé, Paul J.R. Barton, Stuart A. Cook, James S. Ware
Software Mentions: 4
Published: over 11 years ago

10.1371/journal.pntd.0006548

Prediction of the potential global distribution for Biomphalaria straminea, an intermediate host for Schistosoma mansoni
Cited by: 18
Author(s): Ya Yang, Wan Ling Cheng, Xiaoying Wu, Huang ShaoYu, Zongyi Deng, Xiaofeng Zeng, Dongjuan Yuan, Yang Yu, Zhongdao Wu, Yue Chen, Yibiao Zhou, Qingwu Jiang
Software Mentions: 3
Published: over 6 years ago

10.1186/1471-2164-15-673

Validation of multiple single nucleotide variation calls by additional exome analysis with a semiconductor sequencer to supplement data of whole-genome sequencing of a human population
Cited by: 10
Author(s): Ikuko N. Motoike, Mitsuyo Matsumoto, Inaho Danjoh, Fumiki Katsuoka, Kazuyuki Kojima, Naoki Nariai, Yukuto Sato, Yumi Yamaguchi-Kabata, Itó S, Hisaaki Kudo, Ichiko Nishijima, Satoshi Nishikawa, Xiaoqing Pan, Rumiko Saito, Sakae Saitō, Tomo Saito, Matsuyuki Shirota, Kaoru Tsuda, Junji Yokozawa, Kazuhiko Igarashi, Naoko Minegishi, Osamu Takahashi, Nobuo Fuse, Masao Nagasaki, Kengo Kinoshita, Jun Yasuda, Masayuki Yamamoto
Software Mentions: 3
Published: over 10 years ago

10.15252/embj.2020105604

Cold‐induced chromatin compaction and nuclear retention of clock mRNAs resets the circadian rhythm
Cited by: 5
Author(s): Harry Fischl, David McManus, Roel Oldenkamp, Lothar Schermelleh, Jane Mellor, Aarti Jagannath, André Furger
Software Mentions: 3
Published: about 4 years ago

10.3332/ecancer.2019.963

The impact of cancer campaigns in Brazil: a Google Trends analysis
Cited by: 27
Author(s): Luiz Fernando Quintanilha, Laumar Neves de Souza, Daniel Soares Sanches, Rafael Sênos Demarco, Kiyoshi F. Fukutani
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pgen.1007845

Biallelic mutations in nucleoporin NUP88 cause lethal fetal akinesia deformation sequence
Cited by: 21
Author(s): Edith Bonnin, Pauline Cabochette, Alessandro Filosa, Ramona Jühlen, Shoko Komatsuzaki, Mohammed Hezwani, Achim Dickmanns, Valérie Martinelli, Marjorie Vermeersch, Lynn Supply, Natércia C. T. Martins, Laurence Pirenne, Gianina Ravenscroft, Marcus Lombard, Sarah S.A. Port, Christiane Spillner, Sandra Janssens, Ellen Roets, Jo Van Dorpe, Martin Lammens, Ralph H. Kehlenbach, Ralf Ficner, Nigel G. Laing, Katrin Hoffmann, Benoît Vanhollebeke, Birthe Fahrenkrog
Software Mentions: 3
Published: almost 6 years ago

10.3390/jcm8030293

Who Are Dispensed the Bulk Amount of Prescription Opioids?
Cited by: 6
Author(s): M. Mofizul Islam, Dennis Wollersheim
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.ppat.1006510

Rare HIV-1 transmitted/founder lineages identified by deep viral sequencing contribute to rapid shifts in dominant quasispecies during acute and early infection
Cited by: 50
Author(s): Gustavo H. Kijak, Eric Sanders‐Buell, Agnès‐Laurence Chenine, Michael A. Eller, Nilu Goonetilleke, Rasmi Thomas, Sivan Leviyang, Elizabeth A. Harbolick, Meera Bose, Phuc Pham, Celina Oropeza, Kultida Poltavee, Anne Marie O’Sullivan, Erik Billings, Mélanie Merbah, Margaret C. Costanzo, Joanna Warren, Bonnie M. Slike, Hui Li, Kristina K. Peachman, Will Fischer, Feng Gao, Claudia Cicala, James Arthos, Leigh Anne Eller, Robert J. O’Connell, Samuel Sinei, Lucas Maganga, Hannah Kibuuka, Sorachai Nitayaphan, Mangala Rao, Mary Marovich, Shelly J. Krebs, Morgane Rolland, Bette T. Korber, George M. Shaw, Nelson L. Michael, Merlin L. Robb, Sodsai Tovanabutra, Jerome H. Kim
Software Mentions: 3
Published: over 7 years ago

10.1002/ece3.498

New-old hemoglobin-like proteins of symbiotic dinoflagellates
Cited by: 11
Author(s): Nedeljka Rosic, William Leggat, Paulina Kaniewska, Sophie Dove, Ove Hoegh‐Guldberg
Software Mentions: 3
Published: over 11 years ago

10.1186/1471-2164-13-341

A tale of three next generation sequencing platforms: comparison of Ion torrent, pacific biosciences and illumina MiSeq sequencers
Cited by: 1,666
Author(s): Michael A. Quail, Miriam E. Smith, Paul Coupland, Thomas D. Otto, Simon R. Harris, Thomas R. Connor, Anna Bertoni, Harold Swerdlow, Yong Gu
Software Mentions: 3
Published: almost 13 years ago

10.1371/journal.pone.0244860

Regional anesthesia educational material utilization varies by World Bank income category: A mobile health application data study
Cited by: 3
Author(s): Vanessa Moll, Edward R. Mariano, Jamie Kitzman, Vikas N O’Reilly-Shah, Craig S. Jabaley
Software Mentions: 3
Published: almost 4 years ago

10.1186/s13104-020-05275-z

Investigating climatic changes of the wind regime over Western Iran
Cited by: 0
Author(s): Zohreh Maryanaji, Omid Hamidi
Software Mentions: 3
Published: about 4 years ago

10.1038/s41598-021-90997-8

Fine scale analysis of malaria incidence in under-5: hierarchical Bayesian spatio-temporal modelling of routinely collected malaria data between 2012–2018 in Cameroon
Cited by: 3
Author(s): Célestin Danwang, Élie Khalil, Dorothy Achu, Marcelin Ateba, Moïse Abomabo, Jacob Souopgui, Mathilde De Keukeleire, Annie Robert
Software Mentions: 3
Published: over 3 years ago

10.1186/s12879-015-0902-3

Proficiency testing for bacterial whole genome sequencing: an end-user survey of current capabilities, requirements and priorities
Cited by: 55
Author(s): Jacob Moran-Gilad, Vitali Sintchenko, Susanne Karlsmose Pedersen, William J. Wolfgang, James B. Pettengill, Errol Strain, René S. Hendriksen
Software Mentions: 3
Published: over 9 years ago

10.3390/ph11040116

Variation in Prescription Opioid Dispensing across Neighborhoods of Diverse Socioeconomic Disadvantages in Victoria, Australia
Cited by: 8
Author(s): M. Mofizul Islam, Dennis Wollersheim
Software Mentions: 3
Published: about 6 years ago

10.1186/1471-2164-15-541

A linkage map of transcribed single nucleotide polymorphisms in rohu (Labeo rohita) and QTL associated with resistance to Aeromonas hydrophila
Cited by: 32
Author(s): Nick Robinson, Matthew Baranski, Kanta Das Mahapatra, Jatindra Nath Saha, Satyajit Das, Jyotismita Mishra, Paramananda Das, Matthew Kent, Mariann Árnyasi, P.K. Sahoo
Software Mentions: 3
Published: almost 11 years ago

10.1186/s13059-015-0858-z

KIAA0556 is a novel ciliary basal body component mutated in Joubert syndrome
Cited by: 50
Author(s): Anna A. W. M. Sanders, Erik de Vrieze, Anas M. Alazami, Fatema Alzahrani, Erik B. Malarkey, Nasrin Sorusch, Lars Tebbe, Stefanie Kuhns, Teunis J. P. van Dam, Amal Alhashem, Brahim Tabarki, Qianhao Lu, Nils J. Lambacher, Julie Kennedy, Rachel V. Bowie, Lisette Hetterschijt, Sylvia van Beersum, Jeroen van Reeuwijk, Karsten Boldt, Hannie Kremer, Robert A. Kesterson, Dorota Monies, Mohamed Abouelhoda, Ronald Roepman, Martijn A. Huynen, Marius Ueffing, Rob B. Russell, Uwe Wolfrum, Bradley K. Yoder, Erwin van Wijk, Fowzan S. Alkuraya, Oliver E. Blacque
Software Mentions: 3
Published: almost 9 years ago

10.1093/aobpla/ply068

A review of European studies on pollination networks and pollen limitation, and a case study designed to fill in a gap
Cited by: 22
Author(s): Joanne M. Bennett, Amibeth Thompson, Irina Goia, Reinart Feldmann, Valentin Ștefan, Ana Bogdan, Demetra Rákosy, Mirela Beloiu, Inge-Beatrice Biro, Simon Bluemel, Milena Filip, Anna‐Maria Madaj, Alina Martin, Sarah Passonneau, Denisa P Kalisch, Gwydion Scherer, Tiffany M. Knight
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0085413

The Development of a High Density Linkage Map for Black Tiger Shrimp (Penaeus monodon) Based on cSNPs
Cited by: 56
Author(s): Matthew Baranski, G. Gopikrishna, Nick Robinson, Vinaya Kumar Katneni, M. S. Shekhar, Jayakani Shanmugakarthik, Sarangapani Jothivel, C. Gopal, Ravichandran Palaniappan, Matthew Kent, Mariann Árnyasi, A. G. Ponniah
Software Mentions: 2
Published: almost 11 years ago

10.1371/journal.pone.0244195

Taxonomic revision of Madagascan species of the Pheidole fervens species-group (Hymenoptera, Formicidae)
Cited by: 3
Author(s): Sebastian Salata, Brian L. Fisher
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pone.0146248

Honey Bee Allatostatins Target Galanin/Somatostatin-Like Receptors and Modulate Learning: A Conserved Function?
Cited by: 35
Author(s): Elodie Urlacher, Laurent Soustelle, Marie‐Laure Parmentier, Heleen Verlinden, Marie-Julie Ghérardi, Daniel Fourmy, Alison R. Mercer, Jean-Marc Devaud, Isabelle Massou
Software Mentions: 2
Published: almost 9 years ago

10.3390/pathogens10030287

Coxiella burnetii Shedding in Milk and Molecular Typing of Strains Infecting Dairy Cows in Greece
Cited by: 7
Author(s): Emmanouil Kalaitzakis, Tiziano Fancello, Xavier Simons, Ιlias Chaligiannis, Sara Tomaiuolo, Marianna Andreopoulou, Debora Petrone, Aikaterini Papapostolou, Nektarios D. Giadinis, Nikolaos Panousis, Marcella Mori
Software Mentions: 2
Published: over 3 years ago

10.3332/ecancer.2021.1161

Geographic disparities in access to cancer clinical trials in India
Cited by: 4
Author(s): Santam Chakraborty, Indranil Mallick, Hung N. Luu, Tapesh Bhattacharyya, Moses Arunsingh, R. Achari, Sanjoy Chatterjee
Software Mentions: 2
Published: almost 4 years ago

10.1186/s13071-020-04514-3

Canine infection with Dirofilaria immitis, Borrelia burgdorferi, Anaplasma spp., and Ehrlichia spp. in the United States, 2013–2019
Cited by: 26
Author(s): Susan E. Little, Jennifer Braff, Joshua D Place, Jesse Buch, Bhagya Galkissa Dewage, Andrew Knupp, Melissa J. Beall
Software Mentions: 2
Published: almost 4 years ago

10.3897/zookeys.949.51269

Taxonomic revision of the Pheidole sikorae species group (Hymenoptera, Formicidae) from Madagascar
Cited by: 3
Author(s): Sebastian Salata, Brian L. Fisher
Software Mentions: 2
Published: over 4 years ago

10.12688/f1000research.23297.2

GFF Utilities: GffRead and GffCompare
Cited by: 386
Author(s): Geo Pertea, Mihaela Pertea
Software Mentions: 2
Published: about 4 years ago

10.3389/fendo.2019.00612

Analytical and Clinical Validation of Expressed Variants and Fusions From the Whole Transcriptome of Thyroid FNA Samples
Cited by: 37
Author(s): Trevor E. Angell, Lori J. Wirth, Maria E. Cabanillas, Maisie L. Shindo, Edmund S. Cibas, Joshua E. Babiarz, Yangyang Hao, Su Yeon Kim, P. Sean Walsh, Jing Huang, Richard T. Kloos, Giulia C. Kennedy, Steven G. Waguespack
Software Mentions: 2
Published: about 5 years ago

10.3897/zookeys.905.39592

Pheidole Westwood, 1839 (Hymenoptera, Formicidae) of Madagascar – an introduction and a taxonomic revision of eleven species groups
Cited by: 10
Author(s): Sebastian Salata, Brian L. Fisher
Software Mentions: 2
Published: almost 5 years ago

10.1186/s13059-015-0693-2

Comprehensive gene panels provide advantages over clinical exome sequencing for Mendelian diseases
Cited by: 143
Author(s): Firdous Abdulwahab, Hazzaa Selwa, Owaidah Tarek, Sameera Sogaty, Shazia Subhani, Salma M. Wakil, Mohamed Abouelhoda, Abouthuraya Rula, Iman S. Abumansour, Al Rubeaan Khalid, Nada Al Tassan, Tariq Hagos, Samya Hagr, Mais Hashem, Niema Ibrahim, Rana F. Kattan, Namik Kaya, O. Khan Arif, Khier Omnia, Mohamed Jawahir, Naman Paul, Murad Hatem, Patel Nisha, Khushnooda Ramzan, Abu Salim Mustafa, Shagrani Mohammad, Ranad Shaheen, Shamseldin Hanan, Khalid Taibah, O. Ahmed Syed, Alabdulaziz Basma, Khalid H. Alamer, Fh Alazami, Anas Al-Baik, Mohammed A. Aldahmesh, Mohammed Al-Dhekri, Hasan Aldusery, Haya Algazlan, Fowzan S. Alkuraya, Sulaiman Al-Ghonaium, Abdulaziz Alhamed, Amal Alhashem, Amal Alhissi, Safa Ahmed Alissa, Abdulelah Aljurf, Mahmoud D. Alkuraya, Hisham Allam, Rabab Almasharawi, Iman J. Almoisheer, Agaadir Almostafa, Abeer Al-Mousa, Hamoud Al-Muhsen, Saleh Almutairy, Eid A. Alnader, Noukha Alnaqeb, Dhekra Alotaibi, Ab Alotibi, Afaf Al-Qattan, Sarah Al-Saud, Bandar Al‐Saud, Haya Alshammari, Mona Al-Sharif, Hadeel Alsheikh, Abdulmoneem H. Al Sulaiman, Ayman Altamimi, As Al-Tayeb, Hamsa Alwadaee, Sm Al-Younes, B. Alzahrani, Fatima Anazi, Shamsa Arnaout, Rand Bashiri, Fahad A. Bashiri, Fahad Binamer, Yousef Binhumaid, Fs Boholega, Saeed Broering, Dieter Burdelski, M.J. Dasouki, Majed Jamil Dzimiri, Nduna Francis Elamin, Tanziel El-Kalioby, Mohamed Elsiesy, Hussien Faqeih, Eissa Faquih, Alswaid Abdulrahman, Abbas Hawwari, Faiqa Imtiaz, Amal Jabr, Kentab Amal, Khalil Dania, M. Carlson Brian, Dorota Monies, Naim Ea, Hussien Elsiesy
Software Mentions: 2
Published: over 9 years ago

10.1186/1743-422X-6-79

Studies on membrane topology, N-glycosylation and functionality of SARS-CoV membrane protein
Cited by: 54
Author(s): Daniel Voß, Susanne Pfefferle, Christian Drosten, Lea Stevermann, Elisabetta Traggiai, Antonio Lanzavecchia, Stephan Becker
Software Mentions: 2
Published: over 15 years ago

10.1111/j.1365-2958.2008.06231.x

Biosynthesis of the Escherichia coli K1 group 2 polysialic acid capsule occurs within a protected cytoplasmic compartment
Cited by: 49
Author(s): Susan M. Steenbergen, Eric R. Vimr
Software Mentions: 2
Published: over 16 years ago

10.1093/gigascience/giy011

Genome-wide determination of on-target and off-target characteristics for RNA-guided DNA methylation by dCas9 methyltransferases
Cited by: 49
Author(s): Lin Lin, Yong Liu, Fengping Xu, Jinrong Huang, Tina Fuglsang Daugaard, Trine Skov Petersen, Bettina Hansen, Lingfei Ye, Qing Zhou, Fang Fang, Ling Yang, Shengting Li, Lasse Fløe, Kristopher T. Jensen, Ellen Shrock, Fang Chen, Huanming Yang, Jian Wang, Xin Liu, Xun Xu, Lars Bolund, Anders Lade Nielsen, Yonglun Luo
Software Mentions: 2
Published: almost 7 years ago

10.1186/s12915-017-0456-5

Dorsal spine evolution in threespine sticklebacks via a splicing change in MSX2A
Cited by: 31
Author(s): Timothy Howes, Brian R. Summers, David M. Kingsley
Software Mentions: 2
Published: almost 7 years ago

10.1098/rsos.200317

Unusual lizard fossil from the Miocene of Nebraska and a minimum age for cnemidophorine teiids
Cited by: 3
Author(s): Simon G. Scarpetta
Software Mentions: 2
Published: over 4 years ago

10.1186/1477-7827-9-132

Molecular cloning, spatial and temporal expression analysis of CatSper genes in the Chinese Meishan pigs
Cited by: 8
Author(s): Chengyi Song, Bo Gao, Han Wu, Yuxiu Xie, Xiaoyan Wang, Bichun Li, Guohong Chen, Jiude Mao
Software Mentions: 2
Published: almost 14 years ago

10.1038/s41598-017-06033-1

Whole exome sequencing reveals inherited and de novo variants in autism spectrum disorder: a trio study from Saudi families
Cited by: 66
Author(s): Bashayer Al-Mubarak, Mohamed Abouelhoda, Aisha Omar, Hesham Aldhalaan, Mohammed S. Al‐Dosari, Michael Nester, Hussain Al-Shamrani, Mohamed El‐Kalioby, Ewa Goljan, Renad Albar, Shazia Subhani, Asma Tahir, Sultana M. Asfahani, Alaa Eskandrani, Ahmed Almusaiab, Amna Magrashi, Jameela Shinwari, Dorota Monies, Nada Al Tassan
Software Mentions: 2
Published: over 7 years ago

10.1186/s13756-019-0537-z

Control of Acinetobacter baumannii outbreak in the neonatal intensive care unit in Latvia: whole-genome sequencing powered investigation and closure of the ward
Cited by: 29
Author(s): Alise Grāmatniece, Ivars Silamiķelis, Ie. Zahare, Valdis Urtans, Ir. Zahare, Elīna Dimiņa, Mära Saule, Arta Balode, Ilze Radoviča-Spalviņa, Jānis Kloviņš, Dāvids Fridmanis, Uga Dumpis
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-019-40102-x

Integrated Analysis of Whole Exome Sequencing and Copy Number Evaluation in Parkinson’s Disease
Cited by: 30
Author(s): Eman A.A. Al Yemni, Dorota Monies, Thamer Alkhairallah, Saeed Bohlega, Mohamed Abouelhoda, Amna Magrashi, Abeer E. Mustafa, Basma S. AlAbdulaziz, Mohamed H. Al‐Hamed, Batoul Baz, Ewa Goljan, Renad Albar, Amjad Jabaan, Tariq Faquih, Shazia Subhani, Wafa Bel Haj Ali, Jameela Shinwari, Bashayer Al-Mubarak, Nada Al Tassan
Software Mentions: 2
Published: over 5 years ago

10.1186/s12889-020-09267-3

Space-time analysis of ovarian cancer mortality rates by age groups in spanish provinces (1989–2015)
Cited by: 3
Author(s): Paula Camelia Trandafir, Aritz Adin, M. D. Ugarte
Software Mentions: 2
Published: over 4 years ago

10.3390/ijerph18179191

Diurnal Temperature Ranges in Relation to Lower Limb Amputation Rate of Diabetic Foot in South Korea: A Population Based Nationwide Study
Cited by: 1
Author(s): Sung Hun Won, Hyung-Jin Chung, Jin Young Lee, Ye Jin Jeon, Dong-Il Chun, Tae-Hong Min, Jae-Ho Cho, Sungho Won, Young Yi
Software Mentions: 2
Published: about 3 years ago

10.1038/s41598-021-94542-5

HIV-1 molecular diversity in Brazil unveiled by 10 years of sampling by the national genotyping network
Cited by: 8
Author(s): Tiago Gräf, Gonzalo Bello, Paula Andrade, Ighor Arantes, João Marcos Pereira, Alexandre Bonfim Pinheiro da Silva, Rafael Valente Veiga, Diana Mariani, Lídia Theodoro Boullosa, Monica Barcelos Arruda, José Carlos Couto-Fernandez, Ann M. Dennis, David A. Rasmussen, Amílcar Tanuri
Software Mentions: 2
Published: over 3 years ago

10.1186/s12877-020-1469-4

Discharge outcomes among elderly patients undergoing emergency abdominal surgery: registry study of discharge data from Irish public hospitals
Cited by: 8
Author(s): Aisling McCann, Jan Sørensen, Deirdre Nally, Dara Kavanagh, Deborah A. McNamara
Software Mentions: 2
Published: almost 5 years ago

10.3390/ijerph17051682

Multi-Scale Multivariate Models for Small Area Health Survey Data: A Chilean Example
Cited by: 2
Author(s): Andrew Lawson, Anna Schritz, Luís Villarroel, Gloria Aguayo
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pmed.1003177

Evaluation of the effectiveness of topical repellent distributed by village health volunteer networks against Plasmodium spp. infection in Myanmar: A stepped-wedge cluster randomised trial
Cited by: 13
Author(s): Paul A. Agius, Julia C Cutts, Win Han Oo, Aung Thi, Katherine O’Flaherty, Kyaw Zayar Aung, Htin Kyaw Thu, Poe Poe Aung, Myat Mon Thein, Nyi Nyi Zaw, Wai Yan Min Htay, Aung Soe, Zahra Razook, Alyssa E. Barry, Win Htike, Angela Devine, Julie A. Simpson, Brendan S. Crabb, James G. Beeson, Naanki Pasricha, Freya J I Fowkes
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0201452

Zika might not be acting alone: Using an ecological study approach to investigate potential co-acting risk factors for an unusual pattern of microcephaly in Brazil
Cited by: 42
Author(s): Mónica Campos, Jamille Gregório Dombrowski, Jody Phelan, Cláudio R. F. Marinho, Martin L. Hibberd, Taane G. Clark, Susana Campino
Software Mentions: 2
Published: over 6 years ago

Projects: cran: tmap

Papers Mentioning tmap 88