Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fpls.2017.02055

https://doi.org/10.3389/fpls.2017.02055

Diurnal Transcriptome and Gene Network Represented through Sparse Modeling in Brachypodium distachyon

Cited by: 18
Author(s): Satoru Koda, Yoshihiko Onda, Hidetoshi Matsui, Kotaro Takahagi, Yukiko Yamaguchi-Uehara, Minami Shimizu, Komaki Inoue, Takuhiro Yoshida, Tetsuya Sakurai, Hiroshi Honda, Shinto Eguchi, Ryuei Nishii, Keiichi Mochida
Published: almost 7 years ago

Software Mentions 4

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: tmap
Thematic Maps
Papers that mentioned: 88
cran: WaveletComp
Computational Wavelet Analysis
Papers that mentioned: 29
pypi: tmap
A topological data analysis framework implementing the TDA Mapper algorithm for population-scale microbiome data analysis
Papers that mentioned: 88