Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: rootSolve

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/rootSolve

Nonlinear Root Finding, Equilibrium and Steady-State Analysis of Ordinary Differential Equations
20 versions
Latest release: about 1 year ago
104 dependent packages
70,048 downloads last month

Papers Mentioning rootSolve 29

10.3389/fmicb.2020.02033

Plasmid Interactions Can Improve Plasmid Persistence in Bacterial Populations
Cited by: 24
Author(s): João Alves Gama, Rita Zilhão, Francisco Dionísio
Software Mentions: 13
Published: about 4 years ago

10.3390/ijms19030742

Effect of Presence and Concentration of Plasticizers, Vegetable Oils, and Surfactants on the Properties of Sodium-Alginate-Based Edible Coatings
Cited by: 48
Author(s): Tugce Sentürk Parreidt, Michael Schott, Markus Schmid, Kajetan Müller
Software Mentions: 11
Published: over 6 years ago

10.3389/fgene.2019.00516

Microbial Networks in SPRING - Semi-parametric Rank-Based Correlation and Partial Correlation Estimation for Quantitative Microbiome Data
Cited by: 67
Author(s): Grace Yoon, Irina Gaynanova, Christian L. Müller
Software Mentions: 7
Published: over 5 years ago

10.3390/s21020618

Coupling Analytical Models and Machine Learning Methods for Fast and Reliable Resolution of Effects in Multifrequency Eddy-Current Sensors
Cited by: 6
Author(s): Sergey Kucheryavskiy, А. В. Егоров, V. V. Polyakov
Software Mentions: 6
Published: almost 4 years ago

10.1186/s12918-015-0166-y

Reshaping the epigenetic landscape during early flower development: induction of attractor transitions by relative differences in gene decay rates
Cited by: 29
Author(s): José Dávila-Velderrain, Cuauhtémoc Calderón Villarreal, Elena Álvarez-Buylla
Software Mentions: 5
Published: over 9 years ago

10.3389/fmicb.2019.01395

Thermal Niche Differentiation in the Benthic Diatom Cylindrotheca closterium (Bacillariophyceae) Complex
Cited by: 16
Author(s): Willem Stock, Bart Vanelslander, Franziska Rüdiger, Koen Sabbe, Wim Vyverman, Ulf Karsten
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pcbi.1008830

Using Hawkes Processes to model imported and local malaria cases in near-elimination settings
Cited by: 9
Author(s): H. Juliette T. Unwin, Isobel Routledge, Seth Flaxman, Marian-Andrei Rizoiu, Shengjie Lai, Justin M. Cohen, Daniel J. Weiss, Swapnil Mishra, Samir Bhatt
Software Mentions: 4
Published: over 3 years ago

10.1186/s12918-018-0596-4

Single molecules can operate as primitive biological sensors, switches and oscillators
Cited by: 10
Author(s): Rosa D. Hernansaiz-Ballesteros, Luca Cardelli, Attila Csikász‐Nagy
Software Mentions: 4
Published: over 6 years ago

10.1186/s12942-017-0116-6

Accessibility of general and specialized obstetric care providers in Germany and England: an analysis of location and neonatal outcome
Cited by: 8
Author(s): Jan Bauer, David A. Groneberg, Werner Maier, Roxanne Manek, Frank Louwen, Dörthe Brüggmann
Software Mentions: 3
Published: almost 7 years ago

10.1128/mSystems.00186-18

Mobile Compensatory Mutations Promote Plasmid Survival
Cited by: 33
Author(s): Martin Zwanzig, Ellie Harrison, Michael A. Brockhurst, James P. J. Hall, Thomas U. Berendonk, Uta Berger
Software Mentions: 3
Published: over 5 years ago

10.1186/s13021-021-00169-4

Dramatic increase in water use efficiency with cumulative forest disturbance at the large forested watershed scale
Cited by: 5
Author(s): Krysta Giles-Hansen, Xiaohua Wei, Yiping Hou
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0171747

Orthopedic workforce planning in Germany – an analysis of orthopedic accessibility
Cited by: 7
Author(s): Jan Bauer, P Müller, Werner Maier, David A. Groneberg
Software Mentions: 3
Published: almost 8 years ago

10.1016/j.jtbi.2020.110185

Cancer-induced immunosuppression can enable effectiveness of immunotherapy through bistability generation: A mathematical and computational examination
Cited by: 10
Author(s): Víctor García, Sebastian Bonhoeffer, Feng Fu
Software Mentions: 2
Published: over 4 years ago

10.1186/s12859-018-2587-2

A statistical measure for the skewness of X chromosome inactivation based on case-control design
Cited by: 8
Author(s): Peng Wang, Yu Zhang, Bei-Qi Wang, Jianlong Li, Yixin Wang, Dongdong Pan, Xin Wu, Wing K. Fung, Jinfang Zhou
Software Mentions: 2
Published: almost 6 years ago

10.1186/s12863-018-0694-8

A statistical measure for the skewness of X chromosome inactivation based on family trios
Cited by: 5
Author(s): Siqi Xu, Yu Zhang, Peng Wang, Wei Liu, Xin Wu, Jinfang Zhou
Software Mentions: 2
Published: almost 6 years ago

10.1186/s12916-017-0881-x

Detection of antibiotic resistance is essential for gonorrhoea point-of-care testing: a mathematical modelling study
Cited by: 28
Author(s): Stephanie M Fingerhuth, Nicola Low, Sebastian Bonhoeffer, Christian L. Althaus
Software Mentions: 2
Published: over 7 years ago

10.1186/s12874-017-0381-x

Implementing the EffTox dose-finding design in the Matchpoint trial
Cited by: 29
Author(s): Kristian Brock, Lucinda Billingham, Mhairi Copland, Shamyla Siddique, Mirjana Sirovica, Christina Yap
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pcbi.1004695

Integrating Transgenic Vector Manipulation with Clinical Interventions to Manage Vector-Borne Diseases
Cited by: 12
Author(s): Kenichi W. Okamoto, Fred Gould, Alun L. Lloyd
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pntd.0008736

A mathematical model for zoonotic transmission of malaria in the Atlantic Forest: Exploring the effects of variations in vector abundance and acrodendrophily
Cited by: 8
Author(s): Antônio Ralph Medeiros‐Sousa, Gabriel Zorello Laporta, Renato Mendes Coutinho, Luís Filipe Mucci, Mauro Toledo Marrelli
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pntd.0005956

Epidemiological consequences of immune sensitisation by pre-exposure to vector saliva
Cited by: 5
Author(s): Tsukushi Kamiya, Megan A. Greischar, Nicole Mideo
Software Mentions: 2
Published: about 7 years ago

10.1155/2020/7631495

On Modeling the Earthquake Insurance Data via a New Member of the T-<i>X</i> Family
Cited by: 10
Author(s): Zubair Ahmad, Eisa Mahmoudi, Omid Kharazmi
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pone.0217230

Estimating the economic incentives necessary for eliminating child labor in Ghanaian cocoa production
Cited by: 13
Author(s): Jeff Luckstead, Francis Tsiboe, Lawton Lanier Nalley
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0257762

On Bayesian approach to composite Pareto models
Cited by: 2
Author(s): Muhammad Hilmi Abdul Majid, Kamarulzaman Ibrahim
Software Mentions: 1
Published: about 3 years ago

10.1371/journal.ppat.1005611

Antibiotic-Resistant Neisseria gonorrhoeae Spread Faster with More Treatment, Not More Sexual Partners
Cited by: 85
Author(s): Stephanie M Fingerhuth, Sebastian Bonhoeffer, Nicola Low, Christian L. Althaus
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0254999

Modeling the survival times of the COVID-19 patients with a new statistical model: A case study from China
Cited by: 28
Author(s): Xiaofeng Liu, Zubair Ahmad, Ahmed M. Gemeay, Alanazi Talal Abdulrahman, Eslam Hussam, Nuha A. Khalil
Software Mentions: 1
Published: over 3 years ago

10.1186/s12918-015-0213-8

Impact of kinetic isotope effects in isotopic studies of metabolic systems
Cited by: 28
Author(s): Pierre Millard, Jean‐Charles Portais, Pedro Mendes
Software Mentions: 1
Published: about 9 years ago

10.1186/s12863-021-00978-z

A statistical measure for the skewness of X chromosome inactivation for quantitative traits and its application to the MCTFR data
Cited by: 4
Author(s): Baohui Li, Wen-Yi Yu, Jianli Zhou
Software Mentions: 1
Published: over 3 years ago

10.1093/aobpla/ply035

Toleration games: compensatory growth by plants in response to enemy attack is an evolutionarily stable strategy
Cited by: 18
Author(s): Gordon G. McNickle, Wesley D Evans
Software Mentions: 1
Published: over 6 years ago

10.1186/s13756-016-0130-7

Identifying conditions for elimination and epidemic potential of methicillin-resistant Staphylococcus aureus in nursing homes
Cited by: 9
Author(s): Nataliya G. Batina, Christopher Crnich, David F. Anderson, Dörte Döpfer
Software Mentions: 1
Published: about 8 years ago