Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: randomForest

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/randomForest

Breiman and Cutler's Random Forests for Classification and Regression
59 versions
Latest release: over 2 years ago
351 dependent packages
92,890 downloads last month

Papers Mentioning randomForest 1,447

10.1186/s12859-021-04018-6
Reliable genomic strategies for species classification of plant genetic resources
Cited by: 7
Author(s): Artur van Bemmelen van der Plaat, R. van Treuren, T.J.L. van Hintum
Software Mentions: 3
Published: over 3 years ago
10.1186/s12870-020-02564-4
Identification of SNPs and InDels associated with berry size in table grapes integrating genetic and transcriptomic approaches
Cited by: 15
Author(s): Claudia Muñoz-Espinoza, Alex Di Génova, Alicia Sánchez, Juan Correa, Alonso Espinoza, Claudio Meneses, Alejandro Maass, Ariel Orellana, Patricio Hinrichsen
Software Mentions: 3
Published: over 4 years ago
10.3390/molecules17044560
A Support Vector Machine Classification Model for Benzo[c]phenathridine Analogues with Topoisomerase-I Inhibitory Activity
Cited by: 7
Author(s): Khac-Minh Thai, Thuy-Quyen Nguyen, Trieu-Du Ngo, Thanh-Dao Tran, Thi-Ngoc-Phuong Huynh
Software Mentions: 3
Published: over 12 years ago
10.1038/srep28766
Footprints reveal direct evidence of group behavior and locomotion in Homo erectus
Cited by: 80
Author(s): Kevin G. Hatala, Neil T. Roach, Kelly R. Ostrofsky, Roshna E. Wunderlich, Heather L. Dingwall, Brian Villmoare, David J. Green, J. W. Harris, David R. Braun, Brian G. Richmond
Software Mentions: 3
Published: over 8 years ago
10.1002/ece3.4269
Living on the edge: Multiscale habitat selection by cheetahs in a human‐wildlife landscape
Cited by: 30
Author(s): Britt Klaassen, Femke Broekhuis
Software Mentions: 3
Published: over 6 years ago
10.1186/s12967-021-03083-y
Gene clusters based on OLIG2 and CD276 could distinguish molecular profiling in glioblastoma
Cited by: 1
Author(s): Minjie Fu, Jinsen Zhang, Weifeng Liu, Shan He, Jingwen Zhang, Daniel Tennant, Wei Hua, Ying Mao
Software Mentions: 3
Published: about 3 years ago
10.1186/1471-244X-13-298
ADHD in girls and boys – gender differences in co-existing symptoms and executive function measures
Cited by: 170
Author(s): Erik Winther Skogli, Martin H. Teicher, P. Andersen, Kjell Tore Hovik, Merete Glenne Øie
Software Mentions: 3
Published: about 11 years ago
10.1128/mSystems.00150-20
Multiple-Disease Detection and Classification across Cohorts via Microbiome Search
Cited by: 17
Author(s): Xiaoquan Su, Gongchao Jing, Zheng Sun, Lu Liu, Zhenjiang Xu, Daniel McDonald, Zengbin Wang, Honglei Wang, Antonio G. González, Yufeng Zhang, Shi Huang, Gavin A. Huttley, Rob Knight, Jian Xu
Software Mentions: 3
Published: over 4 years ago
10.1038/sdata.2018.53
An open experimental database for exploring inorganic materials
Cited by: 117
Author(s): Andriy Zakutayev, Nick Wunder, Marcus Schwarting, John D. Perkins, Robert R. White, Kristin Munch, William Tumas, Caleb Phillips
Software Mentions: 3
Published: over 6 years ago
10.1371/journal.pntd.0003638
Sensitivity and Specificity of a Novel Classifier for the Early Diagnosis of Dengue
Cited by: 33
Author(s): Nguyễn Minh Tuấn, Ho Thi Nhan, Nguyễn Văn Vĩnh Châu, Nguyễn Thành Hưng, Ha Manh Tuan, Ta Van Tram, Nguyen Le Da Ha, Phan Loi, Han Khoi Quang, Duong Thi Hue Kien, Sonya Hubbard, Tran Nguyen Bich Chau, Bridget Wills, Marcel Wolbers, Cameron P. Simmons
Software Mentions: 3
Published: over 9 years ago
10.3390/s20030625
Data-Driven Modeling of Smartphone-Based Electrochemiluminescence Sensor Data Using Artificial Intelligence
Cited by: 18
Author(s): Elmer Ccopa Rivera, Jonathan Swerdlow, Rodney Lee Summerscales, Padma P. Tadi Uppala, Rubens Maciel Filho, Mabio R. Cohelo Neto, Hyu‐Sang Kwon
Software Mentions: 3
Published: almost 5 years ago
10.1186/1756-0500-4-299
Data mining methods in the prediction of Dementia: A real-data comparison of the accuracy, sensitivity and specificity of linear discriminant analysis, logistic regression, neural networks, support vector machines, classification trees and random forests
Cited by: 291
Author(s): João Marôco, Dina Silva, Ana Carolina Rodrigues, Manuela Guerreiro, Isabel Santana, Alexandre de Mendonça
Software Mentions: 3
Published: over 13 years ago
10.1007/s00204-015-1638-y
High-throughput imaging-based nephrotoxicity prediction for xenobiotics with diverse chemical structures
Cited by: 45
Author(s): Ran Su, Sijing Xiong, Daniele Zink, Lit‐Hsin Loo
Software Mentions: 3
Published: almost 9 years ago
10.1093/molbev/msu266
Dynamics of Copy Number Variation in Host Races of the Pea Aphid
Cited by: 38
Author(s): Ludovic Duvaux, Quentin Geissmann, Karim Gharbi, Jing‐Jiang Zhou, Julia Ferrari, Carole Smadja, Roger K. Butlin
Software Mentions: 3
Published: about 10 years ago
10.3390/proteomes8030024
Profiling of Inflammatory Proteins in Plasma of HIV-1-Infected Children Receiving Antiretroviral Therapy
Cited by: 9
Author(s): Mahlet Lemma, Stefan Petkov, Yonas Bekele, Beyene Petros, Rawleigh Howe, Francesca Chiodi
Software Mentions: 3
Published: about 4 years ago
10.1073/pnas.2011204118
Global inequities and political borders challenge nature conservation under climate change
Cited by: 40
Author(s): Mark A. Titley, Stuart H. M. Butchart, Victoria R. Jones, Mark J. Whittingham, Stephen G. Willis
Software Mentions: 3
Published: almost 4 years ago
10.1098/rspb.2016.0469
Metabolomics of reef benthic interactions reveals a bioactive lipid involved in coral defence
Cited by: 54
Author(s): Robert A. Quinn, Mark J. A. Vermeij, Aaron C. Hartmann, Ines Galtier d'Auriac, Sean Benler, Andreas F. Haas, Steven D. Quistad, Yan Wei Lim, Mark Little, Stuart A. Sandin, Jennifer E. Smith, Pieter C. Dorrestein, Forest Rohwer
Software Mentions: 3
Published: over 8 years ago
10.3390/microorganisms8071065
Tick-Borne Encephalitis Virus and Its European Distribution in Ticks and Endothermic Mammals
Cited by: 16
Author(s): Melanie Walter, Janna R. Vogelgesang, Franz Rubel, Katharina Brugger
Software Mentions: 3
Published: over 4 years ago
10.1186/1471-2105-10-147
Effects of sample size on robustness and prediction accuracy of a prognostic gene signature
Cited by: 79
Author(s): Seon‐Young Kim
Software Mentions: 3
Published: over 15 years ago
10.1186/s12917-016-0849-7
Spatial analysis and characteristics of pig farming in Thailand
Cited by: 44
Author(s): Weerapong Thanapongtharm, Catherine Linard, Pornpiroon Chinson, Suwicha Kasemsuwan, Marjolein Visser, Andrea E. Gaughan, Michael Epprech, Timothy P. Robinson, Marius Gilbert
Software Mentions: 3
Published: about 8 years ago
10.3390/polym10010103
Designing High-Refractive Index Polymers Using Materials Informatics
Cited by: 30
Author(s): Vishwesh Venkatraman, Bjørn K. Alsberg
Software Mentions: 3
Published: almost 7 years ago
10.1002/ece3.5445
Utilizing the density of inventory samples to define a hybrid lattice for species distribution models: DISTRIB‐II for 135 eastern U.S. trees
Cited by: 10
Author(s): Matthew P. Peters, Louis R. Iverson, Anantha Prasad, Stephen N. Matthews
Software Mentions: 3
Published: over 5 years ago
10.1186/s40168-019-0672-z
Seasonal dynamics of DNA and RNA viral bioaerosol communities in a daycare center
Cited by: 27
Author(s): Aaron J. Prussin, Pedro J. Torres, John Shimashita, Steven R. Head, Kyle Bibby, Scott T. Kelley, Linsey C. Marr
Software Mentions: 3
Published: over 5 years ago
10.1371/journal.pone.0207362
Feasibility of CT radiomics to predict treatment response of individual liver metastases in esophagogastric cancer patients
Cited by: 29
Author(s): Remy Klaassen, Ruben T. H. M. Larue, Banafsche Mearadji, Stephanie O. van der Woude, Jaap Stoker, Philippe Lambin, Hanneke W. M. van Laarhoven
Software Mentions: 3
Published: about 6 years ago
10.3389/fnut.2020.602515
Challenges Associated With the Design and Deployment of Food Intake Urine Biomarker Technology for Assessment of Habitual Diet in Free-Living Individuals and Populations—A Perspective
Cited by: 2
Author(s): Manfred Beckmann, Thomas Wilson, Amanda J. Lloyd, Duarte Torres, A. Góios, Naomi D. Willis, Laura Lyons, Helen Phillips, John C. Mathers, John Draper
Software Mentions: 3
Published: almost 4 years ago
10.1371/journal.pone.0239385
Multiple drivers of the COVID-19 spread: The roles of climate, international mobility, and region-specific conditions
Cited by: 36
Author(s): Yasuhiro Kubota, Takayuki Shiono, Buntarou Kusumoto, Junichi Fujinuma
Software Mentions: 3
Published: about 4 years ago
10.1186/s12859-019-2627-6
Predicting protein residue-residue contacts using random forests and deep networks
Cited by: 7
Author(s): Joseph Luttrell, Tong Liu, Chaoyang Zhang, Zheng Wang
Software Mentions: 3
Published: over 5 years ago
10.1186/s40168-020-00918-6
Trophic interactions as determinants of the arbuscular mycorrhizal fungal community with cascading plant-promoting consequences
Cited by: 37
Author(s): Yuji Jiang, Lu Luan, Kaijie Hu, Manqiang Liu, Ziyun Chen, Stefan Geisen, Xiaoyun Chen, Huixin Li, Qinsong Xu, Michael Bonkowski, Bo Sun
Software Mentions: 3
Published: about 4 years ago
10.1515/med-2021-0241
A four-lncRNA signature for predicting prognosis of recurrence patients with gastric cancer
Cited by: 3
Author(s): Qiang Chen, Zunqi Hu, Xin Zhang, Ziran Wei, Hongbing Fu, Dejun Yang, Qing-Qing Cai
Software Mentions: 3
Published: almost 4 years ago
10.3389/fonc.2020.01033
The Clinical and Molecular Characterization of Gastric Cancer Patients in Qinghai-Tibetan Plateau
Cited by: 3
Author(s): Guanghong Rong, Yongxia Zhang, Yussanne Ma, Shilong Chen, Yongcui Wang
Software Mentions: 3
Published: over 4 years ago
10.1038/s41598-021-98879-9
A Random Forest approach to identify metrics that best predict match outcome and player ranking in the esport Rocket League
Cited by: 9
Author(s): Tim D. Smithies, Mark J. Campbell, Niall Ramsbottom, Adam J. Toth
Software Mentions: 3
Published: about 3 years ago
10.1186/s13040-020-00223-w
Diagnosis of thyroid nodules for ultrasonographic characteristics indicative of malignancy using random forest
Cited by: 9
Author(s): Dan Chen, Jun Hu, Mei Zhu, Niansheng Tang, Yang Yang, Yuran Feng
Software Mentions: 3
Published: about 4 years ago
10.1186/s13040-021-00274-7
Evaluation of different approaches for missing data imputation on features associated to genomic data
Cited by: 12
Author(s): Ben Omega Petrazzini, Hugo Naya, Fernando López-Bello, Gustavo E. Vazquez, Lucía Spangenberg
Software Mentions: 3
Published: about 3 years ago
10.1186/s40168-019-0693-7
Competitive interaction with keystone taxa induced negative priming under biochar amendments
Cited by: 119
Author(s): Lijun Chen, Yuji Jiang, Chao Liang, Yu Luo, Qinsong Xu, Cheng Han, Qian Zhao, Bo Sun
Software Mentions: 3
Published: over 5 years ago
10.1038/s41598-021-94536-3
Beneficial insects are associated with botanically rich margins with trees on small farms
Cited by: 12
Author(s): Sarah E. J. Arnold, Filemon Elisante, Prisila A. Mkenda, Yolice Tembo, Patrick A. Ndakidemi, Geoff M. Gurr, Iain Darbyshire, Steven R. Belmain, Philip C. Stevenson
Software Mentions: 3
Published: over 3 years ago
10.1038/s41598-021-93162-3
Statistical and machine learning methods for analysis of multiplex protein data from a novel proximity extension assay in patients with ST-elevation myocardial infarction
Cited by: 1
Author(s): Emil Maag, Archana Kulasingam, Erik Lerkevang Grove, Kamilla Pedersen, Steen Dalby Kristensen, Anne‐Mette Hvas
Software Mentions: 3
Published: over 3 years ago
10.1038/s41598-021-92112-3
Lipidomics study of plasma from patients suggest that ALS and PLS are part of a continuum of motor neuron disorders
Cited by: 23
Author(s): Estela Area‐Gómez, Delfina Larrea, Tack Su Yun, Yimeng Xu, Jonathan Hupf, Fereshteh Zandkarimi, Robin B. Chan, Hiroshi Mitsumoto
Software Mentions: 3
Published: over 3 years ago
10.1098/rsob.200196
The application of rapid evaporative ionization mass spectrometry in the analysis of <i>Drosophila</i> species—a potential new tool in entomology
Cited by: 5
Author(s): Iris Wagner, Natalie I Koch, Joscelyn Sarsby, Nicola White, Tom A. R. Price, Sam Jones, Jane L. Hurst, Robert J. Beynon
Software Mentions: 3
Published: about 4 years ago
10.1186/s12898-019-0238-8
Modeling future wildlife habitat suitability: serious climate change impacts on the potential distribution of the Rock Ptarmigan Lagopus muta japonica in Japan’s northern Alps
Cited by: 20
Author(s): Masanobu Hotta, Ikutaro Tsuyama, Katsuhiro Nakao, Masaaki Ozeki, Motoki Higa, Yuji Kominami, Takashi Hamada, Tetsuya Matsui, Masatsugu Yasuda, Nobuyuki Tanaka
Software Mentions: 3
Published: over 5 years ago
10.1186/1471-2156-9-71
Application of two machine learning algorithms to genetic association studies in the presence of covariates
Cited by: 11
Author(s): Bareng A. S. Nonyane, Andrea S. Foulkes
Software Mentions: 3
Published: about 16 years ago
10.1186/s13040-015-0060-6
Supervised learning methods in modeling of CD4+ T cell heterogeneity
Cited by: 15
Author(s): Pinyi Lu, Vida Abedi, Yefeng Mei, Raquel Hontecillas, Stefan Hoops, Adria Carbo, Josep Bassaganya‐Riera
Software Mentions: 3
Published: over 9 years ago
10.1186/s40168-017-0259-5
Novel soil-inhabiting clades fill gaps in the fungal tree of life
Cited by: 122
Author(s): Leho Tedersoo, Mohammad Bahram, Rasmus Puusepp, R. Henrik Nilsson, Timothy Y. James
Software Mentions: 3
Published: over 7 years ago
10.3389/fpls.2020.558979
Insect Herbivory Strongly Modifies Mountain Birch Volatile Emissions
Cited by: 11
Author(s): Jolanta Rieksta, Tao Li, Robert R. Junker, Jane Uhd Jepsen, Ingvild Ryde, Riikka Rinnan
Software Mentions: 3
Published: about 4 years ago
10.3390/ijms21113814
Urinary MicroRNAs as Potential Markers for Non-Invasive Diagnosis of Bladder Cancer
Cited by: 13
Author(s): Kati Erdmann, Karsten Salomo, Anna Klimová, Ulrike Heberling, Andrea Lohse-Fischer, Romy Fuehrer, Christian Thomas, Ingo Roeder, Michael Froehner, Manfred P. Wirth, Susanne Fuessel
Software Mentions: 3
Published: over 4 years ago
10.3389/fpls.2016.01528
Invasive Shrub Mapping in an Urban Environment from Hyperspectral and LiDAR-Derived Attributes
Cited by: 29
Author(s): Curtis M. Chance, Nicholas C. Coops, Andrew Plowright, Thoreau Rory Tooke, Andreas Christen, Neal W. Aven
Software Mentions: 3
Published: about 8 years ago
10.1002/jcla.23211
Hematological factors associated with immunity, inflammation, and metabolism in patients with systemic lupus erythematosus: Data from a Zhuang cohort in Southwest China
Cited by: 6
Author(s): Xiaoxia Lao, Liping Ma, Qiang Ma, Qiaorong Ma, Zhige Yang, Lingxiao Guo, Wenzheng Nong
Software Mentions: 3
Published: almost 5 years ago
10.1155/2018/3130607
Composition Analysis and Feature Selection of the Oral Microbiota Associated with Periodontal Disease
Cited by: 46
Author(s): Wen-Pei Chen, Shih-Hao Chang, Chuan‐Yi Tang, Ming-Li Liou, Suh‐Jen Jane Tsai, Yaw-Ling Lin
Software Mentions: 3
Published: about 6 years ago
10.3389/fpls.2020.00908
Revealing Shared and Distinct Genes Responding to JA and SA Signaling in Arabidopsis by Meta-Analysis
Cited by: 30
Author(s): Nailou Zhang, Shuang Zhou, Dongyan Yang, Fan Zhang
Software Mentions: 3
Published: over 4 years ago
10.1186/1471-2164-10-144
Expression profile and transcription factor binding site exploration of imprinted genes in human and mouse
Cited by: 33
Author(s): Christine Steinhoff, Martina Paulsen, Szymon M. Kiełbasa, Jörn Walter, Martin Vingron
Software Mentions: 3
Published: almost 16 years ago
10.1371/journal.pone.0130626
Correlates of Recent Declines of Rodents in Northern and Southern Australia: Habitat Structure Is Critical
Cited by: 29
Author(s): Michael J. Lawes, Diana O. Fisher, Christopher N. Johnson, Simon P. Blomberg, Anke S. K. Frank, Susanne A. Fritz, Hamish McCallum, Jeremy VanDerWal, Brett N. Abbott, Sarah Legge, Mike Letnic, Colette R. Thomas, Nikki Thurgate, A. Fisher, Iain J. Gordon, Alex S. Kutt
Software Mentions: 3
Published: over 9 years ago
10.1371/journal.pone.0006416
SlimPLS: A Method for Feature Selection in Gene Expression-Based Disease Classification
Cited by: 44
Author(s): Michael Gutkin, Ron Shamir, Gideon Dror
Software Mentions: 3
Published: over 15 years ago
10.1172/jci.insight.97018
Fine epitope signature of antibody neutralization breadth at the HIV-1 envelope CD4-binding site
Cited by: 16
Author(s): Hao Cheng, Sebastian K. Grimm, M.S.A. Gilman, Luc Christian Gwom, Devin Sok, Christopher Sundling, G. Donofrio, Gunilla B. Karlsson Hedestam, Mattia Bonsignori, Barton F. Haynes, Timothy Lahey, Isaac Maro, C. Fordham von Reyn, Miroslaw K. Gorny, Susan Zolla‐Pazner, Bruce D. Walker, Galit Alter, Dennis R. Burton, Merlin L. Robb, Shelly J. Krebs, Michael S. Seaman, Chris Bailey‐Kellogg, Margaret E. Ackerman
Software Mentions: 3
Published: over 6 years ago
10.3390/jpm11020131
Common Treatment, Common Variant: Evolutionary Prediction of Functional Pharmacogenomic Variants
Cited by: 6
Author(s): Laura B. Scheinfeldt, Andrew Brangan, Dara Kusic, Sudhir Kumar, Neda Gharani
Software Mentions: 3
Published: almost 4 years ago
10.1002/jbm4.10478
Metabolic Alterations in Older Women With Low Bone Mineral Density Supplemented With <i>Lactobacillus reuteri</i>
Cited by: 14
Author(s): Peishun Li, Daniel Sundh, Boyang Ji, Dimitra Lappa, Lingqun Ye, Jens Nielsen, Mattias Lorentzon
Software Mentions: 3
Published: over 3 years ago
10.3389/fpls.2021.640914
Proximal Hyperspectral Imaging Detects Diurnal and Drought-Induced Changes in Maize Physiology
Cited by: 20
Author(s): Stien Mertens, Lennart Verbraeken, Heike Sprenger, Kirin Demuynck, Katrien Maleux, Bernard Cannoot, Jolien De Block, Steven Maere, Hilde Nelissen, Gustavo Bonaventure, Steven J. Crafts‐Brandner, Jonathan T. Vogel, William A. Bruce, Dirk Inzé
Software Mentions: 3
Published: over 3 years ago
10.1186/1471-2105-8-25
Bias in random forest variable importance measures: Illustrations, sources and a solution
Cited by: 2,364
Author(s): Carolin Strobl, Anne‐Laure Boulesteix, Achim Zeileis, Torsten Hothorn
Software Mentions: 3
Published: almost 18 years ago
10.1002/ece3.1878
On the selection of thresholds for predicting species occurrence with presence‐only data
Cited by: 347
Author(s): Canran Liu, Graeme Newell, Matt White
Software Mentions: 3
Published: almost 9 years ago
10.3390/ijms21072517
A Machine Learning-Based Identification of Genes Affecting the Pharmacokinetics of Tacrolimus Using the DMETTM Plus Platform
Cited by: 10
Author(s): Jeong‐An Gim, Yonghan Kwon, Hyun A. Lee, Kyeong‐Ryoon Lee, Soohyun Kim, Yuni Choi, Yu Kyong Kim, Howard Lee
Software Mentions: 3
Published: over 4 years ago
10.7554/eLife.13323
NIH peer review percentile scores are poorly predictive of grant productivity
Cited by: 69
Author(s): Ferric C. Fang, Anthony Bowen, Arturo Casadevall
Software Mentions: 3
Published: almost 9 years ago
10.1002/ece3.3846
Oceanographic variation influences spatial genomic structure in the sea scallop,<i>Placopecten magellanicus</i>
Cited by: 11
Author(s): Mallory Van Wyngaarden, Paul V. R. Snelgrove, Claudio DiBacco, Lorraine C. Hamilton, Naiara Rodríguez-Ezpeleta, Luyao Zhan, Robert G. Beiko, Ian Bradbury
Software Mentions: 3
Published: almost 7 years ago
10.1038/s41598-020-80499-4
Biodiversity response to forest management intensity, carbon stocks and net primary production in temperate montane forests
Cited by: 20
Author(s): Thomas Asbeck, Francesco Sabatini, Andrey Lessa Derci Augustynczik, Marco Basile, Jan Helbach, Marlotte Jonker, Anna K. Knuff, Jürgen Bauhus
Software Mentions: 3
Published: almost 4 years ago
10.1002/ece3.3628
How to deal with ground truthing affected by human-induced habitat change?: Identifying high-quality habitats for the Critically Endangered Red Siskin
Cited by: 3
Author(s): Ada Sánchez‐Mercado, Kathryn M. Rodríguez‐Clark, Jhonathan Miranda, Ferrer-Paris José R., Brian J. Coyle, Samuel Toro, Arlene Cardozo‐Urdaneta, Michael J. Braun
Software Mentions: 3
Published: almost 7 years ago
10.3390/microarrays5030019
Protein Profiling Gastric Cancer and Neighboring Control Tissues Using High-Content Antibody Microarrays
Cited by: 5
Author(s): Martin Sill, Christoph Schröder, Shao‐Yao Ying, Aseel Marzoq, Radovan Komel, Jörg D. Hoheisel, Henrik Nienhüser, Thomas Schmidt, Damjana Kastelic
Software Mentions: 3
Published: over 8 years ago
10.1038/s41598-020-80570-0
Breath biopsy of breast cancer using sensor array signals and machine learning analysis
Cited by: 23
Author(s): Ya‐Chen Yang, Yi-Chia Wang, Hsien Yu Peng, Chi‐Hsiang Huang
Software Mentions: 3
Published: almost 4 years ago
10.1002/ece3.7010
Geographical pattern of genetic diversity in <i>Capsella bursa‐pastoris</i> (Brassicaceae)—A global perspective
Cited by: 12
Author(s): Christina Wesse, Erik Welk, Herbert Hurka, Barbara Neuffer
Software Mentions: 3
Published: about 4 years ago
10.1002/ece3.8002
Species distribution models for invasive Eurasian watermilfoil highlight the importance of data quality and limitations of discrimination accuracy metrics
Cited by: 5
Author(s): Shyam M. Thomas, Michael R. Verhoeven, Jake R. Walsh, Daniel J. Larkin, Gretchen J. A. Hansen
Software Mentions: 3
Published: over 3 years ago
10.1186/s12859-019-2739-z
Extracting predictors for lung adenocarcinoma based on Granger causality test and stepwise character selection
Cited by: 4
Author(s): Xuemeng Fan, Yaolai Wang, Xu-Qing Tang
Software Mentions: 3
Published: over 5 years ago
10.1001/jamanetworkopen.2018.1018
Development and Validation of an Electronic Health Record–Based Machine Learning Model to Estimate Delirium Risk in Newly Hospitalized Patients Without Known Cognitive Impairment
Cited by: 94
Author(s): Andrew Wong, A. E. Young, April S. Liang, Ralph Gonzales, Vanja C. Douglas, Dexter Hadley
Software Mentions: 3
Published: over 6 years ago
10.1155/2021/6650107
Tumor Microenvironment Subtypes and Immune-Related Signatures for the Prognosis of Breast Cancer
Cited by: 2
Author(s): Yiqun Han, Jiayu Wang, Binghe Xu
Software Mentions: 3
Published: over 3 years ago
10.3390/biomedicines8090358
High-Dimensional Analysis of Immune Cell Composition Predicts Periprosthetic Joint Infections and Dissects Its Pathophysiology
Cited by: 11
Author(s): Maximilian F Korn, Richard R. Stein, Andreas Dolf, Farhad Shakeri, Andreas Buneß, Cäcilia Hilgers, Werner Masson, Sascha Gravius, Hendrik Kohlhof, C. Burger, Dieter Christian Wirtz, Thomas M. Randau, Frank A. Schildberg
Software Mentions: 3
Published: about 4 years ago
10.3389/fpsyg.2021.627118
The Contribution of Learning and Mental Health Variables in First-Year Students' Profiles
Cited by: 7
Author(s): Fotios S. Milienos, Christos Rentzios, Leen Catrysse, David Gijbels, Sofia Mastrokoukou, Claudio Longobardi, Evangelia Karagiannopoulou
Software Mentions: 3
Published: over 3 years ago
10.1002/ece3.5383
From canopy to seed: Loss of snow drives directional changes in forest composition
Cited by: 7
Author(s): Sarah M. Bisbing, Brian Buma, Lauren E. Oakes, John Krapek, Allison Bidlack
Software Mentions: 3
Published: over 5 years ago
10.1007/s11306-019-1503-8
Identification and characterization of metabolite quantitative trait loci in tomato leaves and comparison with those reported for fruits and seeds
Cited by: 22
Author(s): Adriano Nunes‐Nesi, Saleh Alseekh, Franklin Magnum de Oliveira Silva, Nooshin Omranian, Gabriel Lichtenstein, Mohammad Mirnezhad, Roman Rodolfo Romero González, Julia Sabio y Garcia, Mariana Conte, Kirsten A. Leiss, Peter G. L. Klinkhamer, Zoran Nikoloski, Fernando Carrari, Alisdair R. Fernie
Software Mentions: 3
Published: over 5 years ago
10.3389/fpsyg.2019.01646
Regression Analysis of ICT Impact Factors on Early Adolescents’ Reading Proficiency in Five High-Performing Countries
Cited by: 34
Author(s): Yanyan Xiao, Yang Liu, Jie Hu
Software Mentions: 3
Published: over 5 years ago
10.1080/19490976.2020.1869505
Establishing a novel colorectal cancer predictive model based on unique gut microbial single nucleotide variant markers
Cited by: 20
Author(s): Chenchen Ma, Kaining Chen, Yuanyuan Wang, Chaoping Cen, Qixiao Zhai, Jiachao Zhang
Software Mentions: 3
Published: almost 4 years ago
10.1042/BSR20201087
Identification of an extracellular vesicle-related gene signature in the prediction of pancreatic cancer clinical prognosis
Cited by: 9
Author(s): Dafeng Xu, Yu Wang, Kailun Zhou, Junzhen Wu, Zhensheng Zhang, Jiachao Zhang, Zhiwei Yu, Luzheng Liu, Xiangmei Liu, Bidan Li, Jinfang Zheng
Software Mentions: 3
Published: almost 4 years ago
10.3390/brainsci10020115
Random Forest Classification of Alcohol Use Disorder Using fMRI Functional Connectivity, Neuropsychological Functioning, and Impulsivity Measures
Cited by: 24
Author(s): Chella Kamarajan, Babak A. Ardekani, Ashwini K. Pandey, Sivan Kinreich, Gayathri Pandey, David B. Chorlian, Jacquelyn L. Meyers, Jian Zhang, Elaine Bermudez, Arthur T. Stimus, Bernice Porjesz
Software Mentions: 3
Published: almost 5 years ago
10.3389/fvets.2020.544707
Endophyte-Infected Tall Fescue Affects Rumen Microbiota in Grazing Ewes at Gestation and Lactation
Cited by: 5
Author(s): Jianmin Chai, Saleh Alrashedi, Ken Coffey, J.M. Burke, Kristina M. Feye, Steven C. Ricke, Si Hong Park, J. L. Edwards, Jiangchao Zhao
Software Mentions: 3
Published: about 4 years ago
10.1186/s13073-021-00953-4
GenTB: A user-friendly genome-based predictor for tuberculosis resistance powered by machine learning
Cited by: 19
Author(s): Matthias I. Gröschel, Martin Owens, Luca Freschi, Roger Vargas, Maximilian G. Marin, Jody Phelan, Zamin Iqbal, Avika Dixit, Maha Farhat
Software Mentions: 3
Published: about 3 years ago
10.1093/gbe/evu250
Extensive Copy Number Variations in Admixed Indian Population of African Ancestry: Potential Involvement in Adaptation
Cited by: 11
Author(s): Ankita Narang, Pankaj Jha, Dhirendra Kumar, Rintu Kutum, Anupam Mondal, Debasis Dash, Mitali Mukerji
Software Mentions: 3
Published: almost 10 years ago
10.1186/1479-5876-12-65
A transcriptomic reporter assay employing neutrophils to measure immunogenic activity of septic patients’ plasma
Cited by: 31
Author(s): Prasong Khaenam, Darawan Rinchai, Matthew C. Altman, Laurent Chiche, Surachat Buddhisa, Chidchamai Kewcharoenwong, Duangchan Suwannasaen, Mike J. Mason, Elizabeth Whalen, Scott Presnell, Wattanachai Susaengrat, Kimberly O’Brien, Quynh Ahn Nguyen, Vivian H. Gersuk, Peter S. Linsley, Ganjana Lertmemongkolchai, Damien Chaussabel
Software Mentions: 3
Published: over 10 years ago
10.1002/ece3.3606
Bird species richness is associated with phylogenetic relatedness, plant species richness, and altitudinal range in Inner Mongolia
Cited by: 11
Author(s): Chenxia Liang, Gang Feng, Xingfeng Si, Lingfeng Mao, Guangfeng Yang, Jens‐Christian Svenning, Jie Yang
Software Mentions: 3
Published: almost 7 years ago
10.18632/oncotarget.27616
Tumor microRNA profile and prognostic value for lymph node metastasis in oral squamous cell carcinoma patients
Cited by: 10
Author(s): Kelly Yi Ping Liu, Siyi Zhu, Denise Brooks, Reanne Bowlby, J.S. Durham, Yussanne Ma, Richard A. Moore, Andrew J. Mungall, Steven J.M. Jones, Catherine F. Poh
Software Mentions: 3
Published: over 4 years ago
10.1128/mSystems.00704-19
Spatial Variation in Soil Fungal Communities across Paddy Fields in Subtropical China
Cited by: 51
Author(s): Pengfa Li, Weitao Li, Alex J. Dumbrell, Ming Liu, Guilong Li, Meng Wu, Chunyu Jiang, Zhongpei Li
Software Mentions: 3
Published: almost 5 years ago
10.1186/s13059-019-1635-1
Modeling double strand break susceptibility to interrogate structural variation in cancer
Cited by: 11
Author(s): Tracy Ballinger, Britta A. M. Bouwman, Reza Mirzazadeh, Silvano Garnerone, Nicola Crosetto, Colin A. Semple
Software Mentions: 3
Published: almost 6 years ago
10.3390/life11080866
Identification of Targeted Proteins by Jamu Formulas for Different Efficacies Using Machine Learning Approach
Cited by: 2
Author(s): Sony Hartono Wijaya, Farit Mochamad Afendi, Irmanida Batubara, Ming Huang, Naoaki Ono, Shigehiko Kanaya, Md. Altaf-Ul-Amin
Software Mentions: 3
Published: about 3 years ago
10.1371/journal.pone.0131628
Integrating Multiple Distribution Models to Guide Conservation Efforts of an Endangered Toad
Cited by: 9
Author(s): Michael Treglia, Robert N. Fisher, Lee A. Fitzgerald
Software Mentions: 3
Published: over 9 years ago
10.3390/genes12020178
Integrated Analysis of Methylomic and Transcriptomic Data to Identify Potential Diagnostic Biomarkers for Major Depressive Disorder
Cited by: 4
Author(s): Yinping Xie, Ling Xiao, Lijuan Chen, Yage Zheng, Caixia Zhang, Gaohua Wang
Software Mentions: 3
Published: almost 4 years ago
10.3390/metabo9070143
Statistical Workflow for Feature Selection in Human Metabolomics Data
Cited by: 50
Author(s): Joseph Antonelli, Brian Claggett, Mir Henglin, Andy Kim, Gavin Ovsak, Nicole J. Kim, Katherine Deng, Kevin Rao, Octavia Tyagi, Jeramie D. Watrous, Kim A. Lagerborg, Pavel Hushcha, Olga V. Demler, Samia Mora, Teemu J. Niiranen, Alexandre C. Pereira, Mohit Jain, Susan Cheng
Software Mentions: 3
Published: over 5 years ago
10.3390/metabo11040206
Spinal Muscular Atrophy after Nusinersen Therapy: Improved Physiology in Pediatric Patients with No Significant Change in Urine, Serum, and Liquor 1H-NMR Metabolomes in Comparison to an Age-Matched, Healthy Cohort
Cited by: 14
Author(s): Leon Deutsch, Damjan Osredkar, Janez Plavec, Blaž Stres
Software Mentions: 3
Published: over 3 years ago
10.1371/journal.pone.0188215
Performance of thigh-mounted triaxial accelerometer algorithms in objective quantification of sedentary behaviour and physical activity in older adults
Cited by: 26
Author(s): Jorgen A. Wullems, Sabine Verschueren, Hans Degens, Christopher I. Morse, Gladys L. Onambélé
Software Mentions: 3
Published: about 7 years ago
10.1186/s12864-019-6295-8
Rule-based meta-analysis reveals the major role of PB2 in influencing influenza A virus virulence in mice
Cited by: 4
Author(s): Fransiskus Xaverius Ivan, Chee Keong Kwoh
Software Mentions: 3
Published: almost 5 years ago
10.1038/s41598-020-73237-3
Prognostic value of FDG-PET radiomics with machine learning in pancreatic cancer
Cited by: 34
Author(s): Yoshitaka Toyama, Masatoshi Hotta, Fuyuhiko Motoi, Kentaro Takanami, Ryogo Minamimoto, Kei Takase
Software Mentions: 3
Published: about 4 years ago
10.1038/s41598-020-71194-5
A global biophysical typology of mangroves and its relevance for ecosystem structure and deforestation
Cited by: 78
Author(s): Thomas A. Worthington, Philine S. E. zu Ermgassen, Daniel A. Friess, Ken W. Krauss, Catherine E. Lovelock, Julia Thorley, Rick Tingey, Colin D. Woodroffe, Peter Bunting, Nicole Cormier, David Lagomasino, Richard Lucas, Nicholas J. Murray, William J. Sutherland, Mark Spalding
Software Mentions: 3
Published: about 4 years ago
10.1371/journal.pone.0073056
Metagenomic Predictions: From Microbiome to Complex Health and Environmental Phenotypes in Humans and Cattle
Cited by: 96
Author(s): Elizabeth M. Ross, Peter J. Moate, L. C. Marett, Ben Cocks, Ben J. Hayes
Software Mentions: 3
Published: about 11 years ago
10.1371/journal.pone.0006646
Genome-Wide mRNA Expression Analysis of Hepatic Adaptation to High-Fat Diets Reveals Switch from an Inflammatory to Steatotic Transcriptional Program
Cited by: 55
Author(s): Marijana Radonjić, Jorn R. de Haan, Marjan J. van Erk, Ko Willems van Dijk, Sjoerd A.A. van den Berg, Philip J. de Groot, Michael Müller, Ben van Ommen
Software Mentions: 3
Published: over 15 years ago
10.3390/cancers11081157
A Novel Type of Blood Biomarker: Distinct Changes of Cytokine-Induced STAT Phosphorylation in Blood T Cells Between Colorectal Cancer Patients and Healthy Individuals
Cited by: 14
Author(s): Jae Won Yun, Sejoon Lee, Hye Mi Kim, Sejong Chun, Edgar G. Engleman, Hee Cheol Kim, Eun Suk Kang
Software Mentions: 3
Published: over 5 years ago
10.1038/s41598-020-69539-1
Assessing the current and potential future distribution of four invasive forest plants in Minnesota, U.S.A., using mixed sources of data
Cited by: 6
Author(s): Jason R. Reinhardt, Matthew B. Russell, Senait D. Senay, William F. Lazarus
Software Mentions: 3
Published: over 4 years ago
10.1371/journal.pone.0252114
Prediction of suicidal ideation and attempt in 9 and 10 year-old children using transdiagnostic risk features
Cited by: 10
Author(s): Gareth Harman, Dakota Kliamovich, Angelica M. Morales, Sydney Gilbert, M Deanna, Michael A. Mooney, Sarah W. Feldstein Ewing, Damien A. Fair, Bonnie J. Nagel
Software Mentions: 3
Published: over 3 years ago
10.1371/journal.pone.0222380
Cultural differences in the use of acoustic cues for musical emotion experience
Cited by: 7
Author(s): Vishal Midya, Jeffrey M. Valla, Hymavathy Balasubramanian, Avantika Mathur, Nandini Chatterjee Singh
Software Mentions: 3
Published: about 5 years ago