Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: primer

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/primer

Functions and Data for the Book, a Primer of Ecology with R
5 versions
Latest release: almost 4 years ago
1 dependent package
711 downloads last month

Papers Mentioning primer 237

10.1093/gbe/evz003
Repeated Evolution Versus Common Ancestry: Sex Chromosome Evolution in the Haplochromine Cichlid<i>Pseudocrenilabrus philander</i>
Cited by: 25
Author(s): Astrid Böhne, Alexandra Anh‐Thu Weber, Jelena Rajkov, Michael Rechsteiner, Andrin Riss, Bernhard Egger, Walter Salzburger
Software Mentions: 10
Published: almost 6 years ago
10.3390/ijms22136641
Transcriptomic and Metabolic Profiling of High-Temperature Treated Storage Roots Reveals the Mechanism of Saccharification in Sweetpotato (Ipomoea batatas (L.) Lam.)
Cited by: 5
Author(s): Chen Li, Meng Kou, Mohamed Hamed Arisha, Wei Tang, Meng Ma, Hui Yan, Xin Wang, Xiaoxiao Wang, Yungang Zhang, Yaju Liu, Runfei Gao, Qiang Li
Software Mentions: 6
Published: over 3 years ago
10.3390/nu13082833
Targeted High-Resolution Taxonomic Identification of Bifidobacterium longum subsp. infantis Using Human Milk Oligosaccharide Metabolizing Genes
Cited by: 8
Author(s): Lauren Tso, Kevin S. Bonham, Alyssa Fishbein, Sophie Rowland, Vanja Klepac‐Ceraj
Software Mentions: 6
Published: over 3 years ago
10.1186/s12864-019-6375-9
Genetic regulatory networks for salt-alkali stress in Gossypium hirsutum with differing morphological characteristics
Cited by: 27
Author(s): Yanchao Xu, Richard Odongo Magwanga, Xiaomin Yang, Dingsha Jin, Xiaoyan Cai, Yuqing Hou, Yangyang Wei, Kunbo Wang, Fang Liu
Software Mentions: 6
Published: almost 5 years ago
10.1371/journal.pone.0031482
Seascape Genetics of a Globally Distributed, Highly Mobile Marine Mammal: The Short-Beaked Common Dolphin (Genus Delphinus)
Cited by: 82
Author(s): Ana Rita Amaral, Luciano B. Beheregaray, Kerstin Bilgmann, Dmitri Boutov, Luís Freitas, Kelly M. Robertson, Marina Sequeira, Karen A. Stockin, M. M. Coelho, Luciana M. Möller
Software Mentions: 6
Published: almost 13 years ago
10.1371/journal.pone.0235218
Transcriptome profiling of longissimus lumborum in Holstein bulls and steers with different beef qualities
Cited by: 17
Author(s): Yan Li, Meimei Wang, Qiufeng Li, Yanxia Gao, Qian Li, Jianguo Li, Yong Cao
Software Mentions: 5
Published: over 4 years ago
10.3390/ijerph18168591
Toxicological Comparison of Mancozeb and Zoxamide Fungicides at Environmentally Relevant Concentrations by an In Vitro Approach
Cited by: 11
Author(s): Gabriele Lori, Roberta Tassinari, Laura Narciso, Ion Udroiu, Antonella Sgura, Francesca Maranghi, Sabrina Tait
Software Mentions: 5
Published: over 3 years ago
10.1111/imb.12513
Integrative transcriptomic and genomic analysis of odorant binding proteins and chemosensory proteins in aphids
Cited by: 45
Author(s): Q. Wang, Jing‐Jiang Zhou, J.-T. Liu, Huang Guixiu, Weina Xu, Qiaoqin Zhang, J.-L. Chen, Fengquan Liu, X.-C. Li, Siyi Gu
Software Mentions: 5
Published: about 6 years ago
10.1186/s12864-015-2124-x
De novo transcriptome reconstruction and annotation of the Egyptian rousette bat
Cited by: 34
Author(s): Albert Kim Lee, Kirsten A. Kulcsar, Oliver Elliott, Hossein Khiabanian, Elyse R. Nagle, Megan E. B. Jones, Brian R. Amman, Mariano Sánchez-Lockhart, Jonathan S. Towner, Gustavo Palacios, Raúl Rabadán
Software Mentions: 5
Published: about 9 years ago
10.1371/journal.pone.0143128
RNA-Seq Analysis Reveals MAPKKK Family Members Related to Drought Tolerance in Maize
Cited by: 30
Author(s): Liu Ya, Miaoyi Zhou, Zhaoxu Gao, Wen Ren, Fan Yang, Hang He, Jiuran Zhao
Software Mentions: 5
Published: about 9 years ago
10.1002/1878-0261.12692
DAPK3 participates in the mRNA processing of immediate early genes in chronic lymphocytic leukaemia
Cited by: 2
Author(s): Fraser Thomas, Katie Holmes, Sarah Kreuz, Peter Hillmen, Pascal Lefèvre
Software Mentions: 4
Published: over 4 years ago
10.1038/s41598-018-24227-z
A new way of producing pediocin in Pediococcus acidilactici through intracellular stimulation by internalized inulin nanoparticles
Cited by: 19
Author(s): Whee-Soo Kim, Jun-Yeong Lee, Bijay Singh, Sushila Maharjan, Liang Hong, Sang-Mok Lee, Lianhua Cui, Ki-June Lee, Girak Kim, Cheol‐Heui Yun, Seoung-Hun Kang, Yun‐Jaie Choi, Chong‐Su Cho
Software Mentions: 4
Published: over 6 years ago
10.1186/s12864-020-6524-1
Transcriptome sequencing and whole genome expression profiling of hexaploid sweetpotato under salt stress
Cited by: 17
Author(s): Mohamed Hamed Arisha, Hesham Aboelnasr, Muhammad Qadir Ahmad, Yaju Liu, Wei Tang, Runfei Gao, Hui Yan, Meng Kou, Xin Wang, Yungang Zhang, Qiang Li
Software Mentions: 4
Published: almost 5 years ago
10.1371/journal.pone.0205668
Comprehensive evaluation of candidate reference genes for real-time quantitative PCR (RT-qPCR) data normalization in nutri-cereal finger millet [Eleusine Coracana (L.)]
Cited by: 10
Author(s): Palakolanu Sudhakar Reddy, Mahamaya G. Dhaware, D. Srinivas Reddy, Bommineni Pradeep Reddy, Kummari Divya, Kiran K. Sharma, Pooja Bhatnagar‐Mathur
Software Mentions: 4
Published: about 6 years ago
10.1186/s12863-019-0790-4
Transcriptome, physiological and biochemical analysis of Triarrhena sacchariflora in response to flooding stress
Cited by: 17
Author(s): Jia Wang, Hao Sun, Jiajin Sheng, Surong Jin, Fangjian Zhou, Zhongli Hu, Youxiang Diao
Software Mentions: 4
Published: about 5 years ago
10.1186/s40425-019-0556-6
Collagen density regulates the activity of tumor-infiltrating T cells
Cited by: 199
Author(s): Dorota Ewa Kuczek, Axel Larsen, Marie-Louise Thorseth, Marco Carretta, Adrija Kalviša, Majken Siersbæk, Ana Micaela Carnaz Simões, Anne Roslind, Lars H. Engelholm, Elfriede Noeßner, Marco Donia, Inge Marie Svane, Per thor Straten, Lars Grøntved, Daniel H. Madsen
Software Mentions: 4
Published: almost 6 years ago
10.3389/fendo.2021.679756
Pre-Menopausal Women With Breast Cancers Having High AR/ER Ratios in the Context of Higher Circulating Testosterone Tend to Have Poorer Outcomes
Cited by: 5
Author(s): Savitha Rajarajan, Aruna Korlimarla, A. Alexander, C E Anupama, Rakesh Ramesh, B S Srinath, T.S. Sridhar, Jyothi S Prabhu
Software Mentions: 4
Published: over 3 years ago
10.7717/peerj.8544
SpeciesPrimer: a bioinformatics pipeline dedicated to the design of qPCR primers for the quantification of bacterial species
Cited by: 9
Author(s): Matthias Dreier, Hélène Berthoud, Noam Shani, Daniel Wechsler, Pilar Junier
Software Mentions: 4
Published: almost 5 years ago
10.3389/fgene.2020.00225
A Comparison of Co-expression Networks in Silk Gland Reveals the Causes of Silk Yield Increase During Silkworm Domestication
Cited by: 9
Author(s): Qi Zhou, Ping Fu, Shu-Shang Li, Changjiang Zhang, Qiuhan Yu, Chuan-Zhen Qiu, Hongbo Zhang, Ze Zhang
Software Mentions: 4
Published: almost 5 years ago
10.1186/s12864-016-2973-y
Transcriptome analysis of seed dormancy after rinsing and chilling in ornamental peaches (Prunus persica (L.) Batsch)
Cited by: 15
Author(s): Kanjana Worarad, Tomohiro Suzuki, Kazuo Ishii, Toshinori Kozaki, Masayuki Iigo, Kenji Yamane
Software Mentions: 4
Published: over 8 years ago
10.1186/s12870-015-0661-8
A bulk segregant transcriptome analysis reveals metabolic and cellular processes associated with Orange allelic variation and fruit β-carotene accumulation in melon fruit
Cited by: 51
Author(s): Noam Chayut, Hui Yuan, Shachar Ohali, Ayala Meir, Yelena Yeselson, Vitaly Portnoy, Yi Zheng, Zhangjun Fei, Efraim Lewinsohn, Nurit Katzir, Arthur A. Schaffer, Shimon Gepstein, Joseph Burger, L i Li, Yaakov Tadmor
Software Mentions: 4
Published: about 9 years ago
10.1186/s12864-018-4499-y
Transcripts within rod photoreceptors of the Zebrafish retina
Cited by: 28
Author(s): Chi Sun, Carlos Galicia, Deborah L. Stenkamp
Software Mentions: 4
Published: almost 7 years ago
10.1002/1878-0261.12052
A genome-wide siRNA screen for regulators of tumor suppressor p53 activity in human non-small cell lung cancer cells identifies components of the RNA splicing machinery as targets for anticancer treatment
Cited by: 50
Author(s): Ellen Siebring-van Olst, Maxime Blijlevens, Renée X. de Menezes, Ida H. van der Meulen-Muileman, Egbert F. Smit, Victor W. van Beusechem
Software Mentions: 4
Published: over 7 years ago
10.1371/journal.pone.0128465
Connecting Anxiety and Genomic Copy Number Variation: A Genome-Wide Analysis in CD-1 Mice
Cited by: 6
Author(s): Julia Brenndörfer, André Altmann, Regina Widner-Andrä, Benno Pütz, Darina Czamara, Erik Tilch, Tony Kam‐Thong, Peter Weber, Monika Rex‐Haffner, Thomas Bettecken, Andrea Bultmann, Bertram Müller‐Myhsok, Elisabeth Binder, Rainer Landgraf, Ludwig Czibere
Software Mentions: 4
Published: over 9 years ago
10.1186/1471-2105-10-331
ConservedPrimers 2.0: A high-throughput pipeline for comparative genome referenced intron-flanking PCR primer design and its application in wheat SNP discovery
Cited by: 29
Author(s): Frank M. You, Naxin Huo, Yong Gu, Gerard R. Lazo, Jan Dvořák, Olin D. Anderson
Software Mentions: 3
Published: about 15 years ago
10.3390/cancers13133201
Serine-Threonine Kinase Receptor-Associated Protein (STRAP) Knockout Decreases the Malignant Phenotype in Neuroblastoma Cell Lines
Cited by: 7
Author(s): Laura V. Bownes, Arthur Robin Williams, Raoud Marayati, Colin H. Quinn, Sara C. Hutchins, Jerry E. Stewart, Trung Vu, Juliet Easlick, Elizabeth Mroczek‐Musulman, David K. Crossman, Joshua C. Anderson, Christopher D. Willey, Pran K. Datta, Elizabeth A. Beierle
Software Mentions: 3
Published: over 3 years ago
10.3390/md18010061
Differential Expression of Nicotine Acetylcholine Receptors Associates with Human Breast Cancer and Mediates Antitumor Activity of αO-Conotoxin GeXIVA
Cited by: 17
Author(s): Zhigang Sun, Manqi Zhangsun, Shuai Dong, Liu Yiqiao, Qian Jiang, Dongting Zhangsun, Sulan Luo
Software Mentions: 3
Published: almost 5 years ago
10.1371/journal.pone.0173035
Reprogramming of the retinoic acid pathway in decidualizing human endometrial stromal cells
Cited by: 36
Author(s): Rie Ozaki, Keiji Kuroda, Yuko Ikemoto, Asako Ochiai, Akemi Matsumoto, Jun Kumakiri, Mari Kitade, Atsuo Itakura, Joanne Muter, Jan J. Brosens, Satoru Takeda
Software Mentions: 3
Published: almost 8 years ago
10.3390/ani10091452
Evaluating the Impact of Wildlife Shelter Management on the Genetic Diversity of Erinaceus europaeus and E. roumanicus in Their Contact Zone
Cited by: 4
Author(s): Kerstin Ploi, Manuel Curto, Barbora Černá Bolfíková, Miroslava Loudová, Pavel Hulva, Anna Seiter, Marilene Fuhrmann, Silvia Winter, Harald Meimberg
Software Mentions: 3
Published: over 4 years ago
10.1371/journal.pone.0136337
An Analysis of Factors Affecting Genotyping Success from Museum Specimens Reveals an Increase of Genetic and Morphological Variation during a Historical Range Expansion of a European Spider
Cited by: 15
Author(s): Henrik Krehenwinkel, Stanislav Pekár
Software Mentions: 3
Published: over 9 years ago
10.3390/pathogens8020061
The Mechanism of Action of Ursolic Acid as a Potential Anti-Toxoplasmosis Agent, and Its Immunomodulatory Effects
Cited by: 16
Author(s): Won Hyung Choi, In Ah Lee
Software Mentions: 3
Published: over 5 years ago
10.1111/1365-2435.12977
Cumulative stress restricts niche filling potential of habitat‐forming kelps in a future climate
Cited by: 20
Author(s): Nathan G. King, David Wilcockson, Richard Webster, Dan A. Smale, Laura Sophie Hoelters, Pippa J. Moore
Software Mentions: 3
Published: over 7 years ago
10.3390/ijms22137090
DNA G-Quadruplexes Contribute to CTCF Recruitment
Cited by: 11
Author(s): Polina Tikhonova, Iulia Pavlova, Ekaterina Isaakova, В. Б. Цветков, Alexandra N. Bogomazova, Tatiana Vedekhina, Artem V. Luzhin, Rinat Sultanov, V. V. Severov, Ksenia M. Klimina, Omar L. Kantidze, Г. Е. Позмогова, Maria A. Lagarkova, Anna M. Varizhuk
Software Mentions: 3
Published: over 3 years ago
10.1186/s12917-019-1898-5
Simultaneous detection and differentiation of canine parvovirus and feline parvovirus by high resolution melting analysis
Cited by: 9
Author(s): Yaru Sun, Yuhua Cheng, Peng Lin, Hewei Zhang, Li Yi, Mingwei Tong, Zhigang Cao, Shuang Li, Shipeng Cheng, Jianke Wang
Software Mentions: 3
Published: over 5 years ago
10.18632/oncotarget.25523
FOXP3 and miR-155 cooperate to control the invasive potential of human breast cancer cells by down regulating ZEB2 independently of ZEB1
Cited by: 19
Author(s): Cheryl Y. Brown, Sonia Dayan, Soon Wei Wong, Adrian Kaczmarek, Christopher Hope, Stephen Pederson, Victoria K Arnet, Gregory J. Goodall, Darryl L. Russell, Timothy Sadlon, Simon C. Barry
Software Mentions: 3
Published: over 6 years ago
10.1002/pld3.265
Dwarfism of high‐monolignol Arabidopsis plants is rescued by ectopic LACCASE overexpression
Cited by: 15
Author(s): M. Perkins, Mathias Schuetz, Faride Unda, Rebecca A. Smith, Richard Sibout, Natalie Hoffmann, D. Wong, Simone D. Castellarin, Shawn D. Mansfield, Lacey Samuels
Software Mentions: 3
Published: over 4 years ago
10.1093/pcp/pcaa077
Molecular and Physiological Alterations in Chickpea under Elevated CO2 Concentrations
Cited by: 14
Author(s): P. Palit, Raju Ghosh, Priya Tolani, Avijit Tarafdar, Annapurna Chitikineni, Prasad Bajaj, Mamta Sharma, Himabindu Kudapa, Rajeev K. Varshney
Software Mentions: 3
Published: over 4 years ago
10.1038/s41598-017-09377-w
Development and inter-laboratory assessment of droplet digital PCR assays for multiplex quantification of 15 genetically modified soybean lines
Cited by: 38
Author(s): Alexandra Bogožalec Košir, Bjørn Spilsberg, Arne Holst‐Jensen, Jana Z̆el, David Dobnik
Software Mentions: 3
Published: over 7 years ago
10.1155/2016/6261490
Validation of Housekeeping Genes to Study Human Gingival Stem Cells and Their<i>In Vitro</i>Osteogenic Differentiation Using Real-Time RT-qPCR
Cited by: 14
Author(s): Ihsène Taïhi, Ali Nassif, Tsouria Berbar, Juliane Isaac, Ariane Berdal, Bruno Gogly, Benjamin Fournier
Software Mentions: 3
Published: almost 9 years ago
10.1111/jcmm.16550
Effect of lncRNA‐ATB/miR‐651‐3p/Yin Yang 1 pathway on trophoblast‐endothelial cell interaction networks
Cited by: 10
Author(s): Yangxue Yin, Jiashuo Zhang, Hongbiao Yu, Min Liu, Xuelian Zheng, Rong Zhou
Software Mentions: 3
Published: over 3 years ago
10.3389/fvets.2021.591273
The Profiles of Long Non-coding RNA and mRNA Transcriptome Reveals the Genes and Pathway Potentially Involved in Pasteurella multocida Infection of New Zealand Rabbits
Cited by: 3
Author(s): Jiaqing Hu, Wenqiang Li, Bing Huang, Qiaoya Zhao, Xinzhong Fan
Software Mentions: 3
Published: over 3 years ago
10.1038/s41598-019-57404-9
Comprehensive analysis of circRNAs from cashmere goat skin by next generation RNA sequencing (RNA-seq)
Cited by: 28
Author(s): Yuanyuan Zheng, Taiyu Hui, Yue Chang, Jiaming Sun, Dan Guo, Suling Guo, Shu Guo, Bojiang Li, Zeying Wang, Wenlin Bai
Software Mentions: 3
Published: almost 5 years ago
10.1038/s41598-017-08434-8
Great cormorants (Phalacrocorax carbo) as potential vectors for the dispersal of Vibrio cholerae
Cited by: 27
Author(s): Sivan Laviad-Shitrit, Tidhar Lev-Ari, Gadi Katzir, Yehonatan Sharaby, Ido Izhaki, Malka Halpern
Software Mentions: 3
Published: over 7 years ago
10.7508/ibj.2015.03.007
Association of Lecithin Cholesterol Acyltransferase rs5923 Polymorphism in Iranian Individuals with Extremely Low High-Density Lipoprotein Cholesterol: Tehran Lipid and Glucose Study.
Cited by: 2
Author(s): Mohsen Naseri, Mehdi Hedayati, Maryam Sadat Daneshpour, Fatemeh Bandarian, Fereidoun Azizi
Software Mentions: 3
Published: almost 10 years ago
10.1371/journal.pntd.0004512
Unbiased Characterization of Anopheles Mosquito Blood Meals by Targeted High-Throughput Sequencing
Cited by: 57
Author(s): Kyle Logue, John B. Keven, Matthew Cannon, Lisa J. Reimer, Peter Siba, Edward D. Walker, Peter A. Zimmerman, David Serre
Software Mentions: 3
Published: almost 9 years ago
10.1371/journal.pone.0134910
Gene Expression Profile in the Liver of BALB/c Mice Infected with Fasciola hepatica
Cited by: 12
Author(s): José Rojas-Caraballo, Julio López‐Abán, Pedro Fernández‐Soto, Belén Vicente, Francisco Collía, Antonio Muro
Software Mentions: 3
Published: over 9 years ago
10.1155/2019/7241096
Analysis of the ASMT Gene Family in Pepper (<i>Capsicum annuum</i> L.): Identification, Phylogeny, and Expression Profiles
Cited by: 18
Author(s): Luzhao Pan, Jian Zheng, Jia Liu, Guo Jun, Liu FaWan, Lecheng Liu, Hongjian Wan
Software Mentions: 3
Published: over 5 years ago
10.3390/nu12030624
Alliin, An Allium sativum Nutraceutical, Reduces Metaflammation Markers in DIO Mice
Cited by: 17
Author(s): Marina A. Sánchez-Sánchez, Adelaida Sara Minia Zepeda-Morales, Lucrecia Carrera-Quintanar, Juan Manuel Viveros–Paredes, Noel N Franco-Arroyo, Marisol Godínez-Rubí, Daniel Ortuño-Sahagún, Rocío Ivette López-Roa
Software Mentions: 3
Published: almost 5 years ago
10.3389/fcimb.2021.619981
Innate Immune Responses of Galleria mellonella to Mycobacterium bovis BCG Challenge Identified Using Proteomic and Molecular Approaches
Cited by: 8
Author(s): Masanori Asai, Gerard Sheehan, Yanwen Li, Brian Robertson, Kevin Kavanagh, Paul Langford, Sandra M. Newton
Software Mentions: 3
Published: almost 4 years ago
10.1038/s42003-018-0141-4
PIWI genes and piRNAs are ubiquitously expressed in mollusks and show patterns of lineage-specific adaptation
Cited by: 53
Author(s): Julia Jehn, Daniel Gebert, Frank Pipilescu, Sarah Stern, Julian Simon Thilo Kiefer, Charlotte Hewel, David Rosenkranz
Software Mentions: 3
Published: over 6 years ago
10.3389/fcell.2021.698442
Long Non-coding RNA Signatures Associated With Liver Aging in Senescence-Accelerated Mouse Prone 8 Model
Cited by: 3
Author(s): Shuai Zhang, Juan-Juan Duan, Yuguang Du, Jinlu Xie, Haijing Zhang, Changyu Li, Wensheng Zhang
Software Mentions: 3
Published: over 3 years ago
10.1038/s41419-019-1397-4
EMT is associated with an epigenetic signature of ECM remodeling genes
Cited by: 83
Author(s): Paul Peixoto, Amandine Etcheverry, Marc Aubry, Anaïs Missey, Camille Lachat, Jérôme Perrard, Elodie Hendrick, Régis Delage-Mourroux, Jean Mosser, Christophe Borg, Jean-Paul Feugeas, Michaël Herfs, Michaël Boyer-Guittaut, Éric Hervouet
Software Mentions: 3
Published: almost 6 years ago
10.3390/vaccines9091019
The Importance of Quality Control of LSDV Live Attenuated Vaccines for Its Safe Application in the Field
Cited by: 16
Author(s): Andy Haegeman, Ilse De Leeuw, Meruyert A. Saduakassova, Willem Van Campe, Laetitia Aerts, Wannes Philips, Akhmetzhan A. Sultanov, Laurent Mostin, Kris De Clercq
Software Mentions: 3
Published: over 3 years ago
10.3390/cells9030748
The S100B Inhibitor Pentamidine Ameliorates Clinical Score and Neuropathology of Relapsing—Remitting Multiple Sclerosis Mouse Model
Cited by: 23
Author(s): Gabriele Di Sante, Susanna Amadio, Beatrice Sampaolese, Maria Elisabetta Clementi, Mariagrazia Valentini, Cinzia Volonté, Patrizia Casalbore, Francesco Ria, Fabrizio Michetti
Software Mentions: 3
Published: almost 5 years ago
10.1371/journal.pone.0147727
Transcriptomic Determinants of Scrapie Prion Propagation in Cultured Ovine Microglia
Cited by: 12
Author(s): Juan F. Muñoz-Gutiérrez, Sebastián Aguilar Pierlé, David A. Schneider, Timothy V. Baszler, James B. Stanton
Software Mentions: 3
Published: almost 9 years ago
10.1186/s13071-020-3986-6
Probe-based multiplex qPCR identifies blood-meal hosts in Anopheles mosquitoes from Papua New Guinea
Cited by: 7
Author(s): John B. Keven, Georgia Artzberger, Mary L. Gillies, Rex B. Mbewe, Edward D. Walker
Software Mentions: 3
Published: almost 5 years ago
10.1002/ece3.2460
Phenological asynchrony between host plant and gypsy moth reduces insect gut microbiota and susceptibility to <i>Bacillus thuringiensis</i>
Cited by: 23
Author(s): V. V. Martemyanov, І. A. Belousova, Sergey V. Pavlushin, Ivan M. Dubovskiy, Nikita I. Ershov, Tatyana Alikina, Мarsel R. Kabilov, В. В. Глупов
Software Mentions: 3
Published: over 8 years ago
10.1371/journal.pone.0221170
Inter-genus gene expression analysis in livestock fibroblasts using reference gene validation based upon a multi-species primer set
Cited by: 4
Author(s): Marcelo Tigre Moura, Roberta L. O. Silva, Pábola Santos Nascimento, José Carlos Ferreira-Silva, Ludymila Furtado Cantanhêde, Éderson Akio Kido, Ana Maria Benko‐Iseppon, Marcos Antônio Lemos Oliveira
Software Mentions: 3
Published: over 5 years ago
10.1371/journal.pone.0210116
Evidence of CD1d pathway of lipid antigen presentation in mouse primary lung epithelial cells and its up-regulation upon Mycobacterium bovis BCG infection
Cited by: 15
Author(s): Zaigham Abbas Rizvi, Niti Puri, Rajiv K. Saxena
Software Mentions: 3
Published: about 6 years ago
10.1111/mec.13251
Microbiome structure of the fungid coral <i> <scp>C</scp> tenactis echinata </i> aligns with environmental differences
Cited by: 106
Author(s): Cornelia Roder, Till Bayer, Manuel Aranda, Maren Kruse, Christian R. Voolstra
Software Mentions: 3
Published: over 9 years ago
10.1371/journal.pone.0127925
Rapid Recovery of an Urban Remnant Reptile Community following Summer Wildfire
Cited by: 23
Author(s): Robert A. Davis, Tim S. Doherty
Software Mentions: 3
Published: over 9 years ago
10.1371/journal.pone.0120622
A Molecular Analysis Provides Novel Insights into Androgen Receptor Signalling in Breast Cancer
Cited by: 18
Author(s): Jatin Mehta, Shailendra Asthana, Chandi C. Mandal, Sunita Saxena
Software Mentions: 3
Published: almost 10 years ago
10.1371/journal.pone.0234714
Prostatic hyperplasia: Vascularization, hemodynamic and hormonal analysis of dogs treated with finasteride or orchiectomy
Cited by: 4
Author(s): Daniel de Souza Ramos Angrimani, Maria Claudia Pereda Francischini, Maíra Morales Brito, Camila Infantosi Vannucchi
Software Mentions: 3
Published: over 4 years ago
10.3389/fpls.2018.01591
Rice Soluble Starch Synthase I: Allelic Variation, Expression, Function, and Interaction With Waxy
Cited by: 19
Author(s): Qianfeng Li, Xinyan Li, Changquan Zhang, Li Jiang, Meiyan Jiang, Min Zhong, Xiaolei Fan, Minghong Gu
Software Mentions: 3
Published: about 6 years ago
10.1080/23802359.2019.1664949
Complete mitochondrial genome and phylogenetic analysis of Stonogobiops yasha (Perciformes, Gobiidae)
Cited by: 0
Author(s): Hengtong Qiu, Cuili Wang
Software Mentions: 2
Published: over 5 years ago
10.3390/microorganisms7120606
Schizosaccharomyces pombe Can Reduce Acetic Acid Produced by Baijiu Spontaneous Fermentation Microbiota
Cited by: 20
Author(s): Zhewei Song, Hai Du, Menghui Zhang, Yao Nie, Yan Xu
Software Mentions: 2
Published: about 5 years ago
10.3390/microorganisms8121992
Hymenopteran Parasitoids of Hard Ticks in Western Africa and the Russian Far East
Cited by: 6
Author(s): Mapenda Gaye, Nadia Amanzougaghene, Younes Laidoudi, El Hadji Amadou Niang, Zuzana Sekeyová, Maureen Laroche, Jean-Michel Bérenger, Didier Raoult, Mária Kazimírová, Florence Fénollar, Oleg Mediannikov
Software Mentions: 2
Published: about 4 years ago
10.1111/1751-7915.12327
Innovative molecular diagnosis of<scp><i>T</i></scp><i>richinella</i>species based on β‐carbonic anhydrase genomic sequence
Cited by: 16
Author(s): Reza Zolfaghari Emameh, Marianne Kuuslahti, Anu Näreaho, Antti Sukura, Seppo Parkkila
Software Mentions: 2
Published: about 9 years ago
10.1186/1471-2164-12-156
RefGenes: identification of reliable and condition specific reference genes for RT-qPCR data normalization
Cited by: 249
Author(s): Tomás Hrúz, Markus Wyss, Mylène Docquier, Michael W. Pfaffl, Sabine Masanetz, Loris Borghi, Phebe Verbrugghe, Luba Kalaydjieva, Stefan Bleuler, Oliver Laule, Patrick Descombes, Wilhelm Gruissem, Philip Zimmermann
Software Mentions: 2
Published: almost 14 years ago
10.5194/aab-62-171-2019
Copy number variation (CNV) in the &amp;lt;i&amp;gt;IGF1R&amp;lt;/i&amp;gt; gene across four cattle breeds and its association with economic traits
Cited by: 17
Author(s): Yihan Ma, Yifan Wen, Xiukai Cao, Jie Cheng, Yongzhen Huang, Yun Ma, Linyong Hu, Chuzhao Lei, Xinglei Qi, Hui Cao, Hong Chen
Software Mentions: 2
Published: over 5 years ago
10.3390/medsci7070080
LDLR Gene Polymorphisms (rs5925 and rs1529729) Are Associated with Susceptibility to Coronary Artery Disease in a South Indian Population
Cited by: 4
Author(s): Chandan Kumar Jha, Rashid Mir, Imadeldin Elfaki, Shaheena Banu, S.M.S. Chahal
Software Mentions: 2
Published: over 5 years ago
10.1097/MD.0000000000019194
Rapid identification of clinical common invasive fungi via a multi-channel real-time fluorescent polymerase chain reaction melting curve analysis
Cited by: 5
Author(s): Xiaozi Wen, Qiong Chen, Han Yin, Shuchao Wu, Xianjun Wang
Software Mentions: 2
Published: almost 5 years ago
10.1186/s12864-020-07364-6
Genome evolution during bread wheat formation unveiled by the distribution dynamics of SSR sequences on chromosomes using FISH
Cited by: 4
Author(s): Yingxin Zhang, Chengming Fan, Yuhong Chen, Richard R.‐C. Wang, Xiaofei Zhang, Fangpu Han, Zhongliang Hu
Software Mentions: 2
Published: almost 4 years ago
10.1016/j.mod.2012.10.002
Global analysis of the haematopoietic and endothelial transcriptome during zebrafish development
Cited by: 24
Author(s): J.E. Cannon, Elsie S. Place, Alex Eve, Charles R. Bradshaw, Abdul Karim Sesay, Nicholas W. Morrell, James C. Smith
Software Mentions: 2
Published: almost 12 years ago
10.1186/1471-2164-15-143
Dynamics of the chili pepper transcriptome during fruit development
Cited by: 50
Author(s): Luis A Martínez-López, Neftalí Ochoa-Alejo, Octavio Martínez
Software Mentions: 2
Published: almost 11 years ago
10.1093/aobpla/pls041
Expression patterns of ethylene biosynthesis genes from bananas during fruit ripening and in relationship with finger drop
Cited by: 8
Author(s): Olivier Hubert, Didier Mbéguié-A-Mbéguié
Software Mentions: 2
Published: about 12 years ago
10.3390/ani8090145
Copy Number Variations of KLF6 Modulate Gene Transcription and Growth Traits in Chinese Datong Yak (Bos Grunniens)
Cited by: 14
Author(s): Habtamu Abera Goshu, Xiaoyun Wu, Min Chen, Pengjia Bao, Xuezhi Ding, Ping Yan
Software Mentions: 2
Published: over 6 years ago
10.1186/1475-2875-4-63
Plasmodium yoelii 17XL infection up-regulates RANTES, CCR1, CCR3 and CCR5 expression, and induces ultrastructural changes in the cerebellum
Cited by: 28
Author(s): Bismark Sarfo, Henry B. Armah, Ikovwaiza Irune, Andrew A. Adjei, Christine S. Olver, Shailesh Singh, James W. Lillard, Jonathan K. Stiles
Software Mentions: 2
Published: about 19 years ago
10.1186/1475-2875-7-86
A regulatable transgene expression system for cultured Plasmodium falciparum parasites
Cited by: 44
Author(s): Christian Epp, Dima Raskolnikov, Kirk W. Deitsch
Software Mentions: 2
Published: over 16 years ago
10.1186/1471-2164-12-509
Gene expression profiling in the Cynomolgus macaque Macaca fascicularis shows variation within the normal birth range
Cited by: 12
Author(s): Bright Starling Emerald, Keefe Chng, Shinji Masuda, Deborah M. Sloboda, Mark H. Vickers, Ravi Kambadur, Peter D. Gluckman
Software Mentions: 2
Published: about 13 years ago
10.1186/s12944-016-0358-5
Schisandra polysaccharide inhibits hepatic lipid accumulation by downregulating expression of SREBPs in NAFLD mice
Cited by: 46
Author(s): Chunmei Wang, Rongshuang Yuan, Wenyue Zhuang, Jia Sun, Jinying Wu, He Li, Jianguang Chen
Software Mentions: 2
Published: about 8 years ago
10.1186/1476-511X-13-83
CYP4F2 genetic polymorphisms are associated with coronary heart disease in a Chinese population
Cited by: 11
Author(s): Chaoqin Yu, Qi Yan, Chunjiang Fu, Weibin Shi, Hongyong Wang, Chunyu Zeng, Xukai Wang
Software Mentions: 2
Published: over 10 years ago
10.1007/s10482-015-0630-0
Tenacibaculum finnmarkense sp. nov., a fish pathogenic bacterium of the family Flavobacteriaceae isolated from Atlantic salmon
Cited by: 40
Author(s): Sverre Bang Småge, Øyvind Jakobsen Brevik, Henrik Duesund, Karl Fredrik Ottem, K. Watanabe, Are Nylund
Software Mentions: 2
Published: about 9 years ago
10.1186/s12944-017-0533-3
Metabolomics study of the therapeutic mechanism of Schisandra Chinensis lignans in diet-induced hyperlipidemia mice
Cited by: 38
Author(s): Jia Sun, Xu Liu, Lixin Cong, He Li, Chengyi Zhang, Jianguang Chen, Chunmei Wang
Software Mentions: 2
Published: over 7 years ago
10.1186/s12933-016-0362-0
Association between insulin receptor substrate-1 polymorphisms and high platelet reactivity with clopidogrel therapy in coronary artery disease patients with type 2 diabetes mellitus
Cited by: 22
Author(s): Dingyu Zhang, Xiaolin Zhang, Dan Liú, Tengfei Liu, Wenzhi Cai, Yan Cao, Yaling Han
Software Mentions: 2
Published: almost 9 years ago
10.1186/s12864-020-07046-3
Comparative transcriptome analysis revealed the cooperative regulation of sucrose and IAA on adventitious root formation in lotus (Nelumbo nucifera Gaertn)
Cited by: 6
Author(s): Long Cheng, Zhao Minrong, Zhubing Hu, Huiying Liu, Shuyan Li
Software Mentions: 2
Published: over 4 years ago
10.1002/cam4.2893
Characterization of lncRNA <i>LINC00520</i> and functional polymorphisms associated with breast cancer susceptibility in Chinese Han population
Cited by: 8
Author(s): Qiaoyun Guo, Lei Xu, Rui Peng, Yan Ma, Yanli Wang, Feifei Chong, Mengmeng Song, Liping Dai, Chunhua Song
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.pone.0104247
Ethanol Suppresses PGC-1α Expression by Interfering with the cAMP-CREB Pathway in Neuronal Cells
Cited by: 24
Author(s): Zilong Liu, Yongping Liu, Rui Gao, Haixia Li, Tiffany J. Dunn, Ping Wu, Robert G. Smith, Partha S. Sarkar, Xiang Fang
Software Mentions: 2
Published: over 10 years ago
10.3390/bios11030074
Rapid Detection of Pathogens in Wound Exudate via Nucleic Acid Lateral Flow Immunoassay
Cited by: 13
Author(s): Anna Brunauer, René D. Verboket, Daniel M. Kainz, Felix von Stetten, Susanna M. Früh
Software Mentions: 2
Published: almost 4 years ago
10.3390/antibiotics7030070
Evaluation of a Hydrogel-Based Diagnostic Approach for the Point-of-Care Based Detection of Neisseria gonorrhoeae
Cited by: 5
Author(s): Sumudu R Perera, Ali Taheri, Nurul H. Khan, Rajinder P. Parti, Stephanie Stefura, Pauline Skiba, Jason P. Acker, Irene Martín, Anthony Kusalik, Jo-Anne R. Dillon
Software Mentions: 2
Published: over 6 years ago
10.3390/ani9121008
Copy Number Variation of the CADM2 Gene and Its Association with Growth Traits in Yak
Cited by: 7
Author(s): Fei Ge, Jia Chen, Min Chen, Chunnian Liang, Ping Yan
Software Mentions: 2
Published: about 5 years ago
10.3390/ani8050071
Single Nucleotide Polymorphisms in the HIRA Gene Affect Litter Size in Small Tail Han Sheep
Cited by: 15
Author(s): Mei Zhou, Zhangyuan Pan, Xiaohan Cao, Xiaofei Guo, Xiaoyun He, Qing Sun, Ran Di, Wenping Hu, Xiangyu Wang, Xiaosheng Zhang, Jinlong Zhang, Chunyuan Zhang, Qiuyue Liu, Mingxing Chu
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0214882
The human adenovirus type 5 E1B 55kDa protein interacts with RNA promoting timely DNA replication and viral late mRNA metabolism
Cited by: 3
Author(s): Berto Tejera, Raúl E. López, Paloma Hidalgo, Reinier Cárdenas, Grisel Ballesteros, Lina Rivillas, Leidys French, Carlos Amero, Ángel Santiago, Peter Groitl, Thomas Dobner, Rafael González
Software Mentions: 2
Published: over 5 years ago
10.1042/BSR20160589
Plasma <i>miR-21</i> expression: an indicator for the severity of Type 2 diabetes with diabetic retinopathy
Cited by: 43
Author(s): Qi Jiang, Xueman Lyu, Yi Yuan, Ling Wang
Software Mentions: 2
Published: almost 8 years ago
10.1371/journal.pone.0208530
Development of a recombinase polymerase based isothermal amplification combined with lateral flow assay (HLB-RPA-LFA) for rapid detection of "Candidatus Liberibacter asiaticus"
Cited by: 56
Author(s): Dilip K. Ghosh, Sunil Kokane, Amol Kokane, Ashish Warghane, Manali Motghare, Sumit Bhose, Ashwani Sharma, M. Krishna Reddy
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pone.0042413
SPARC Is a Key Regulator of Proliferation, Apoptosis and Invasion in Human Ovarian Cancer
Cited by: 65
Author(s): Jie Chen, Mei Wang, Bo Xi, Jing Xue, Dan He, Jie Zhang, Yong Zhao
Software Mentions: 2
Published: over 12 years ago
10.3390/biom6010012
Chitooligomer-Immobilized Biointerfaces with Micropatterned Geometries for Unidirectional Alignment of Myoblast Cells
Cited by: 6
Author(s): Pornthida Poosala, Takuya Kitaoka
Software Mentions: 2
Published: almost 9 years ago
10.1371/journal.pone.0110896
The IQD Gene Family in Soybean: Structure, Phylogeny, Evolution and Expression
Cited by: 35
Author(s): Feng Lin, Zhu Chen, Hongyu Ma, Xue Chen, Yuan Li, Yiyi Wang, Yan Xiang
Software Mentions: 2
Published: about 10 years ago
10.1371/journal.pone.0074458
Status Epilepticus Induces Vasogenic Edema via Tumor Necrosis Factor-α/ Endothelin-1-Mediated Two Different Pathways
Cited by: 52
Author(s): Jieun Kim, Hea Jin Ryu, Tae‐Cheon Kang
Software Mentions: 2
Published: over 11 years ago
10.1186/1471-2164-14-630
FishMicrosat: a microsatellite database of commercially important fishes and shellfishes of the Indian subcontinent
Cited by: 20
Author(s): N. S. Nagpure, Iliyas Rashid, Rameshwar Pati, Ajey Kumar Pathak, Mahender Singh, Shri Prakash Singh, Uttam Kumar Sarkar
Software Mentions: 2
Published: over 11 years ago