cran: pheatmap | Projects | Ecosyste.ms: Papers

10.1172/JCI128865

Innate and adaptive nasal mucosal immune responses following experimental human pneumococcal colonization
Cited by: 33
Author(s): Simon P. Jochems, Karin de Ruiter, Carla Solórzano, Astrid Voskamp, Elena Mitsi, Elissavet Nikolaou, Beatriz F. Carniel, Sherin Pojar, Esther L. German, Jesús Reiné, Alessandra Soares‐Schanoski, Helen Hill, Rachel Robinson, Angela Hyder-Wright, Caroline M. Weight, Pascal F. Durrenberger, Robert S. Heyderman, Stephen B. Gordon, Hermelijn H. Smits, Britta C. Urban, Jamie Rylance, Andrea Collins, Mark D. Wilkie, L Lazarova, Samuel Leong, Maria Yazdanbakhsh, Daniela M. Ferreira
Software Mentions: 2
Published: almost 7 years ago

10.1172/JCI132139

Fetal alcohol spectrum disorder predisposes to metabolic abnormalities in adulthood
Cited by: 28
Author(s): Olivia Weeks, Gabriel D. Bossé, Isaac M. Oderberg, Sebastian Akle, Yariv Houvras, Paul J. Wrighton, Kyle A. LaBella, Isabelle Iversen, Sahar Tavakoli, Isaac Adatto, Arkadi Schwartz, Daan J. Kloosterman, Allison Tsomides, Michael E. Charness, Randall T. Peterson, Matthew L. Steinhauser, Pouneh K. Fazeli, Wolfram Goessling
Software Mentions: 2
Published: over 6 years ago

10.1002/jcla.23428

Hsa_circ_0023642 promotes proliferation, invasion, and migration of gastric cancer by sponging microRNA‐223
Cited by: 6
Author(s): Yi Zhang, Lei Xia, Jing Wu, Xinyu Xu, Gang Li
Software Mentions: 2
Published: about 6 years ago

10.1038/s41374-018-0104-x

Genome-wide DNA methylation encodes cardiac transcriptional reprogramming in human ischemic heart failure
Cited by: 64
Author(s): Mark E Pepin, Chae-Myeong Ha, David K. Crossman, Silvio Litovsky, Sooryanarayana Varambally, Joseph Barchue, Salpy V. Pamboukian, Νικόλαος Διάκος, Stavros G. Drakos, Steven M. Pogwizd, Adam R. Wende
Software Mentions: 2
Published: over 7 years ago

10.1002/cam4.1924

MicroRNA-372 enhances radiosensitivity while inhibiting cell invasion and metastasis in nasopharyngeal carcinoma through activating the PBK-dependent p53 signaling pathway
Cited by: 19
Author(s): Zhe Wang, Mao Jiwei, Guangyan Liu, Fuguang Wang, Zaishuang Ju, Dong Zhou, Ruo–Yu Wang
Software Mentions: 2
Published: over 7 years ago

10.1186/s12915-019-0684-y

MARPLE, a point-of-care, strain-level disease diagnostics and surveillance tool for complex fungal pathogens
Cited by: 50
Author(s): Guru V. Radhakrishnan, Nicola Cook, Vanessa Bueno-Sancho, Clare M. Lewis, Antoine Persoons, Abel Debebe Mitiku, Matthew M. Heaton, Phoebe E. Davey, Bekele Abeyo, Yoseph Alemayehu, Ayele Badebo, M. D. Barnett, Ruth Bryant, Jeron Chatelain, Xianming Chen, Suomeng Dong, Tina Henriksson, Sarah Holdgate, Annemarie Fejer Justesen, Jay Kalous, Zhensheng Kang, Szymon Laczny, Jean-Paul Legoff, Driecus Lesch, Tracy L. Richards, H. S. Randhawa, Tine Thach, Meinan Wang, Mogens S. Hovmøller, David Hodson, Diane G. O. Saunders
Software Mentions: 2
Published: about 7 years ago

10.1155/2021/5445349

Integrated Bioinformatics-Based Identification of Potential Diagnostic Biomarkers Associated with Diabetic Foot Ulcer Development
Cited by: 7
Author(s): Long Qian, Zhipeng Xia, Ming Zhang, Qi Han, Die Hu, Qiuying Sha, Dan Xing, Yan Chen, Xin Zhao
Software Mentions: 2
Published: about 5 years ago

10.1002/cam4.2905

Characterization of the immune microenvironment in brain metastases from different solid tumors
Cited by: 8
Author(s): Jinling Jiang, Lihong Wu, Fei Yuan, Jun Ji, Xiaojing Lin, Wanning Yang, Junwei Wu, Min Shi, Hui Yang, Yanna Ma, Song Xue, Zhenggang Zhu, Henghui Zhang, Jun Zhang
Software Mentions: 2
Published: over 6 years ago

10.1093/jxb/ert437

Genome-wide identification, splicing, and expression analysis of the myosin gene family in maize (Zea mays)
Cited by: 13
Author(s): Guifeng Wang, Mingyu Zhong, Jiajia Wang, Jushan Zhang, Yiming Tang, Wang Gang, Rentao Song
Software Mentions: 2
Published: over 12 years ago

10.1093/jxb/erw361

Dynamic changes of small RNAs in rice spikelet development reveal specialized reproductive phasiRNA pathways
Cited by: 94
Author(s): Qili Fei, Yang Li, Wanqi Liang, Dabing Zhang, Blake C. Meyers
Software Mentions: 2
Published: almost 10 years ago

10.1093/jxb/erz541

Mutations of two FERONIA-like receptor genes enhance rice blast resistance without growth penalty
Cited by: 35
Author(s): Zhuhong Yang, Junjie Xing, Long Wang, Yue Liu, Jianing Qu, Yang Tan, Xiqin Fu, Qinlu Lin, Huafeng Deng, Feng Yu
Software Mentions: 2
Published: over 6 years ago

10.1093/jxb/erz552

Morphological and stage-specific transcriptome analyses reveal distinct regulatory programs underlying yam (Dioscorea alata L.) bulbil growth
Cited by: 13
Author(s): Zhigang Wu, Jiang Wu, Zheng-Ming Tao, Xiao-Jun Pan, Wenhui Yu, Huilian Huang
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.ppat.1004566

Cellular Oxidative Stress Response Controls the Antiviral and Apoptotic Programs in Dengue Virus-Infected Dendritic Cells
Cited by: 194
Author(s): David Olagnier, Suraj Peri, Courtney Steel, Nadine van Montfoort, Cindy Chiang, Vladimir Beljanski, Michael Slifker, Zhong He, Carmen N. Nichols, Rongtuan Lin, Siddharth Balachandran, John Hiscott
Software Mentions: 2
Published: over 11 years ago

10.7554/eLife.54868

Pattern regulation in a regenerating jellyfish
Cited by: 28
Author(s): Chiara Sinigaglia, Sophie Péron, Jeanne Eichelbrenner, Sandra Chevalier, Julia Steger, Carine Barreau, Evelyn Houliston, Lucas Leclère
Software Mentions: 2
Published: almost 6 years ago

10.1186/s12935-018-0669-x

Integrated whole genome microarray analysis and immunohistochemical assay identifies COL11A1, GJB2 and CTRL as predictive biomarkers for pancreatic cancer
Cited by: 24
Author(s): Defeng Sun, Haoyi Jin, Jun Zhang, Xiaodong Tan
Software Mentions: 2
Published: almost 8 years ago

10.7554/eLife.66192

Single-cell analysis of mosquito hemocytes identifies signatures of immune cell subtypes and cell differentiation
Cited by: 25
Author(s): Hyeogsun Kwon, Mubasher Mohammed, Oscar Franzén, Johan Ankarklev, Ryan C. Smith
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.ppat.1009028

Vesicular trafficking permits evasion of cGAS/STING surveillance during initial human papillomavirus infection
Cited by: 31
Author(s): Brittany L. Uhlorn, Robert Jackson, Shuaizhi Li, Shauna M. Bratton, Koenraad Van Doorslaer, Samuel K. Campos
Software Mentions: 2
Published: almost 6 years ago

10.1186/s12935-021-01756-8

Prognostic values, ceRNA network, and immune regulation function of SDPR in KRAS-mutant lung cancer
Cited by: 5
Author(s): Xiangjian Luo, Shunli Peng, Sijie Ding, Qin Zeng, Rong Wang, Yuyan Ma, ShiYu Chen, Yanxia Wang, Wei Wang
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.ppat.1009195

K18-hACE2 mice develop respiratory disease resembling severe COVID-19
Cited by: 200
Author(s): Claude Kwe Yinda, Julia R Port, Trenton Bushmaker, Irene Offei Owusu, Jyothi N. Purushotham, Victoria A. Avanzato, Robert J. Fischer, Jonathan Schulz, Myndi G. Holbrook, Madison J. Hebner, Rebecca Rosenke, Tina Thomas, Andrea Marzi, Sonja M. Best, Emmie de Wit, Carl Shaia, Neeltje van Doremalen, Vincent J. Munster
Software Mentions: 2
Published: over 5 years ago

10.1186/s12935-021-01797-z

MicroRNA-1182 and let-7a exert synergistic inhibition on invasion, migration and autophagy of cholangiocarcinoma cells through down-regulation of NUAK1
Cited by: 16
Author(s): Xin Pan, Gang Wang, Baoming Wang
Software Mentions: 2
Published: over 5 years ago

10.1073/pnas.2009053117

Male reproductive aging arises via multifaceted mating-dependent sperm and seminal proteome declines, but is postponable in <i>Drosophila</i>
Cited by: 35
Author(s): Irem Sepil, Ben R. Hopkins, Rebecca Dean, Eleanor Bath, Solomon Friedman, B.F. Swanson, Harrison J Ostridge, Lucy Harper, Norene A. Buehner, Mariana F. Wolfner, Rebecca Konietzny, Marie‐Laëtitia Thézénas, Elizabeth Sandham, P. David Charles, Román Fischer, Josefa Steinhauer, Benedikt M. Kessler, Stuart Wigby
Software Mentions: 2
Published: about 6 years ago

10.1186/s12935-019-0977-9

Inactivation of the Wnt/β-catenin signaling pathway underlies inhibitory role of microRNA-129-5p in epithelial–mesenchymal transition and angiogenesis of prostate cancer by targeting ZIC2
Cited by: 19
Author(s): Zhenming Jiang, Yuxi Zhang, Xi Chen, Pingeng Wu, Dong Chen
Software Mentions: 2
Published: almost 7 years ago

10.1007/s13238-019-00662-0

Contact-dependent delivery of IL-2 by dendritic cells to CD4 T cells in the contraction phase promotes their long-term survival
Cited by: 4
Author(s): Dan Tong, Li Zhang, Fei Ning, Ying Xu, Xiaoyu Hu, Yan Shi
Software Mentions: 2
Published: almost 7 years ago

10.1186/s12859-016-1148-9

IGDD: a database of intronless genes in dicots
Cited by: 21
Author(s): Hanwei Yan, Xiaogang Dai, Kai Feng, Qiuyue Ma, Tongming Yin
Software Mentions: 2
Published: about 10 years ago

10.7554/eLife.52416

Repression of interrupted and intact rDNA by the SUMO pathway in Drosophila melanogaster
Cited by: 9
Author(s): Yicheng Luo, Elena Fefelova, Maria Ninova, Yung-Chia Ariel Chen, Alexei A. Aravin
Software Mentions: 2
Published: almost 6 years ago

10.1186/s13075-019-2033-5

Long non-coding XIST raises methylation of TIMP-3 promoter to regulate collagen degradation in osteoarthritic chondrocytes after tibial plateau fracture
Cited by: 21
Author(s): Hongwei Chen, Shuo Yang, Ru-yi Shao
Software Mentions: 2
Published: almost 7 years ago

10.1186/s12935-020-01271-2

Identification of immune-related biomarkers associated with tumorigenesis and prognosis in cutaneous melanoma patients
Cited by: 40
Author(s): Biao Huang, Wei Han, Zu-Feng Sheng, Ge Shen
Software Mentions: 2
Published: over 6 years ago

10.1186/s12935-021-02163-9

Effects of RNA methylation N6-methyladenosine regulators on malignant progression and prognosis of melanoma
Cited by: 15
Author(s): Jinfang Liu, Zijian Zhou, Ling Ma, Chujun Li, Yongcheng Lin, Ting Yu, Ji‐Fu Wei, Lingjun Zhu, Gang Yao
Software Mentions: 2
Published: about 5 years ago

10.1128/AEM.00180-19

Growth Kinetics, Carbon Isotope Fractionation, and Gene Expression in the Hyperthermophile <i>Methanocaldococcus jannaschii</i> during Hydrogen-Limited Growth and Interspecies Hydrogen Transfer
Cited by: 17
Author(s): Begüm D. Topçuoğlu, Cem Meydan, Tran B. Nguyen, Susan Q. Lang, James F. Holden
Software Mentions: 2
Published: over 7 years ago

10.1111/cns.13137

Molecular and clinical characterization of TMEM71 expression at the transcriptional level in glioma
Cited by: 19
Author(s): Kuanyu Wang, Ruoyu Huang, Xuezhi Tong, Ke‐Nan Zhang, Yanwei Liu, Fan Zeng, Huimin Hu, Tao Jiang
Software Mentions: 2
Published: about 7 years ago

10.1186/1742-4690-10-160

Transcriptional profiling reveals molecular signatures associated with HIV permissiveness in Th1Th17 cells and identifies Peroxisome Proliferator-Activated Receptor Gammaas an intrinsic negative regulator of viral replication
Cited by: 44
Author(s): Annie Bernier, Aurélie Cleret-Buhot, Yuwei Zhang, Jean-Philippe Goulet, Patricia Monteiro, Annie Gosselin, Sandrina DaFonseca, Vanessa Sue Wacleche, Mohammad Ali Jenabian, Jean Pierre Routy, Cécile Tremblay, Petronela Ancuța
Software Mentions: 2
Published: almost 13 years ago

10.1186/s13058-021-01434-7

Accelerated aging in normal breast tissue of women with breast cancer
Cited by: 7
Author(s): Shoghag Panjarian, Jozef Madžo, Kelsey Keith, Carolyn Slater, Carmen Sapienza, Jaroslav Jelı́nek, Jean-Pierre J. Issa
Software Mentions: 2
Published: over 5 years ago

10.1186/s12284-021-00459-y

Genomics Analyses Reveal Unique Classification, Population Structure and Novel Allele of Neo-Tetraploid Rice
Cited by: 12
Author(s): Hang Yu, Qihang Li, Yudi Li, Haijun Yang, Zengjun Lu, Jinwen Wu, Zemin Zhang, Muhammad Qasim Shahid, Xiangdong Liu
Software Mentions: 2
Published: over 5 years ago

10.1186/s12284-021-00524-6

Metabolomic and Transcriptomic Changes Induced by Potassium Deficiency During Sarocladium oryzae Infection Reveal Insights into Rice Sheath Rot Disease Resistance
Cited by: 9
Author(s): Jianglin Zhang, Zhifeng Lu, Tao Ren, Rihuan Cong, Xiaokun Li
Software Mentions: 2
Published: almost 5 years ago

10.1126/sciadv.abg4081

Immune checkpoint inhibitors increase T cell immunity during SARS-CoV-2 infection
Cited by: 26
Author(s): Nader Yatim, Jérémy Boussier, P. Tétu, Nikaïa Smith, Timothée Bruel, Bruno Charbit, Laura Barnabei, Aurélien Corneau, Laetitia Da Meda, Clara Allayous, Barouyr Baroudjian, Majdi Jebali, F. Herms, Ludivine Grzelak, Isabelle Staropoli, Vincent Calmettes, Jérôme Hadjadj, Olivier Peyrony, C. Cassius, Jérôme LeGoff, N. Kramkimel, S. Aractingi, Magnus Fontes, Catherine Blanc, Frédéric Rieux‐Laucat, Olivier Schwartz, Benjamin Terrier, Darragh Duffy, Célèste Lebbe
Software Mentions: 2
Published: about 5 years ago

10.1002/brb3.1319

Identification of key genes and upstream regulators in ischemic stroke
Cited by: 8
Author(s): Qian Zhang, Wenjie Chen, Siqia Chen, Shunxian Li, Dang Wei, Wenzhen He
Software Mentions: 2
Published: over 7 years ago

10.1038/sdata.2015.30

Comparative, transcriptome analysis of self-organizing optic tissues
Cited by: 10
Author(s): Munazah Andrabi, Shigehiro Kuraku, Nozomu Takata, Yoshiki Sasai, Nick R. Love
Software Mentions: 2
Published: about 11 years ago

10.1038/s41416-018-0277-5

Differences in DNA methylation profiles by histologic subtype of paediatric germ cell tumours: a report from the Children’s Oncology Group
Cited by: 25
Author(s): Lindsay A. Williams, Lauren J. Mills, Anthony J. Hooten, Erica Langer, Michelle A. Roesler, A. Lindsay Frazier, Mark Krailo, Heather H. Nelson, Jessica Bestrashniy, James F. Amatruda, Jenny N. Poynter
Software Mentions: 2
Published: almost 8 years ago

10.1186/s13068-018-1274-x

Characterization and genome analysis of a butanol–isopropanol-producing Clostridium beijerinckii strain BGS1
Cited by: 32
Author(s): Chen Zhang, Tinggang Li, Jianzhong He
Software Mentions: 2
Published: almost 8 years ago

10.1038/srep11606

Microbial population dynamics in response to Pectobacterium atrosepticum infection in potato tubers
Cited by: 45
Author(s): Viia Kõiv, Märt Roosaare, Eve Vedler, Paula Ann Kivistik, Kristel Toppi, David W. Schryer, Maido Remm, Tanel Tenson, Andres Mäe
Software Mentions: 2
Published: about 11 years ago

10.1038/srep12601

Inner workings of thrombolites: spatial gradients of metabolic activity as revealed by metatranscriptome profiling
Cited by: 42
Author(s): Jennifer M. Mobberley, Christina L. Khodadad, Pieter T. Visscher, R. Pamela Reid, Paul D. Hagan, Jamie S. Foster
Software Mentions: 2
Published: about 11 years ago

10.1128/AEM.00885-21

Mining the Factors Driving the Evolution of the Pit Mud Microbiome under the Impact of Long-Term Production of Strong-Flavor Baijiu
Cited by: 30
Author(s): Li‐Juan Chai, Wei Qian, Xiao-Zhong Zhong, Xiaojuan Zhang, Zhen‐Ming Lu, Suyi Zhang, Songtao Wang, Caihong Shen, Jin‐Song Shi, Zhenghong Xu
Software Mentions: 2
Published: about 5 years ago

10.1186/s13068-021-02014-9

Function of ORFC of the polyketide synthase gene cluster on fatty acid accumulation in Schizochytrium limacinum SR21
Cited by: 8
Author(s): Yanyan Shi, Zhe Chen, Yixin Li, Xingyu Cao, Lijie Yang, Yiyuan Xu, Zhipeng Li, Ning He
Software Mentions: 2
Published: about 5 years ago

10.18632/aging.202271

Immune-related gene signature predicts overall survival of gastric cancer patients with varying microsatellite instability status
Cited by: 9
Author(s): Ruyue Tian, Jiexuan Hu, Xiao Ma, Lei Liang, Shaodong Guo
Software Mentions: 2
Published: over 5 years ago

10.1038/srep20602

Intestinal Microbiota Distinguish Gout Patients from Healthy Humans
Cited by: 213
Author(s): Zhuang Guo, Jiachao Zhang, Zhanli Wang, Kay Ying Ang, Shi Huang, Qiangchuan Hou, Xiaoquan Su, Jun Qiao, Yi Zheng, Lifeng Wang, Eileen Y. Koh, Ho Danliang, Jian Xu, Yuan Kun Lee, Heping Zhang
Software Mentions: 2
Published: over 10 years ago

10.1038/srep22919

Whole genome sequencing identifies a novel species of the genus Capnocytophaga isolated from dog and cat bite wounds in humans
Cited by: 27
Author(s): Salah Zangenah, Nasir M. Abbasi, Anders F. Andersson, Peter Bergman
Software Mentions: 2
Published: over 10 years ago

10.1038/srep24984

Gene expression analysis and SNP/InDel discovery to investigate yield heterosis of two rubber tree F1 hybrids
Cited by: 29
Author(s): Dejun Li, Rizhong Zeng, Yan Li, Manman Zhao, Jinquan Chao, Li Yu, Kai Wang, Lihuang Zhu, Weimin Tian, Chengzhi Liang
Software Mentions: 2
Published: over 10 years ago

10.1038/srep27256

Induction of Germ Cell-like Cells from Porcine Induced Pluripotent Stem Cells
Cited by: 33
Author(s): Hanning Wang, Jinzhu Xiang, Wei Zhang, Junhong Li, Qingqing Wei, Zhong Liu, Hongsheng Ouyang, Jianyong Han
Software Mentions: 2
Published: over 10 years ago

10.1038/srep32524

Metagenomic approach reveals microbial diversity and predictive microbial metabolic pathways in Yucha, a traditional Li fermented food
Cited by: 61
Author(s): Jiachao Zhang, Xiaoru Wang, Dongxue Huo, Wu Li, Qisong Hu, Chang Xu, Sixin Liu, Congfa Li
Software Mentions: 2
Published: about 10 years ago

10.1038/srep37929

Variations in abundance, diversity and community composition of airborne fungi in swine houses across seasons
Cited by: 44
Author(s): Priyanka Kumari, Cheolwoon Woo, Naomichi Yamamoto, Hee Sun Choi
Software Mentions: 2
Published: almost 10 years ago

10.1038/srep38709

Regional variations in the diversity and predicted metabolic potential of benthic prokaryotes in coastal northern Zhejiang, East China Sea
Cited by: 33
Author(s): Kai Wang, Xiansen Ye, Huajun Zhang, Heping Chen, Demin Zhang, Lian Liu
Software Mentions: 2
Published: almost 10 years ago

10.3390/ani10122261

The Serum and Saliva Proteome of Dogs with Diabetes Mellitus
Cited by: 7
Author(s): Lorena Franco‐Martínez, Andrea Gelemanović, Anita Horvatić, María Dolores Contreras-Aguilar, Vladimir Mrljak, José J. Cerón, Silvia Martı́nez-Subiela
Software Mentions: 2
Published: almost 6 years ago

10.1042/BSR20204394

Five candidate biomarkers associated with the diagnosis and prognosis of cervical cancer
Cited by: 8
Author(s): Hui-Lin Han, Jiang-Tao Mou, Wenping Jiang, Xiuming Zhai, Kun Deng
Software Mentions: 2
Published: over 5 years ago

10.1042/BSR20192436

Bioinformatics analysis of the potential biomarkers for acute respiratory distress syndrome
Cited by: 3
Author(s): Lin Liao, Liao Pinhu
Software Mentions: 2
Published: about 6 years ago

10.1042/BSR20182196

microRNA-613 exerts anti-angiogenic effect on nasopharyngeal carcinoma cells through inactivating the AKT signaling pathway by down-regulating FN1
Cited by: 11
Author(s): Ru Gao, Qiaolei Feng, Guolin Tan
Software Mentions: 2
Published: about 7 years ago

10.1038/s41598-017-03820-8

Tracing the epidemic history of HIV-1 CRF01_AE clusters using near-complete genome sequences
Cited by: 31
Author(s): Xingguang Li, Haizhou Liu, Lu Liu, Yi Feng, Marcia L. Kalish, Simon Y. W. Ho, Yiming Shao
Software Mentions: 2
Published: about 9 years ago

10.1042/BSR20201704

Data mining of immune-related prognostic genes in metastatic melanoma microenvironment
Cited by: 4
Author(s): Wei Han, Biao Huang, Xiaoyu Zhao, Ge Shen
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-017-10436-5

Microbial communities in peatlands along a chronosequence on the Sanjiang Plain, China
Cited by: 16
Author(s): Xue Zhou, Zhenqing Zhang, Lei Tian, Xiujun Li, Chunjie Tian
Software Mentions: 2
Published: about 9 years ago

10.1155/2020/3925189

Genetic Polymorphisms and Forensic Efficiencies of a Set of Novel Autosomal InDel Markers in a Chinese Mongolian Group
Cited by: 4
Author(s): Wenqing Zhang, Xiaoye Jin, Yijie Wang, Tingting Kong, Wei Cui, Chong Chen, Yuxin Guo, Bofeng Zhu
Software Mentions: 2
Published: over 6 years ago

10.1155/2020/9747826

Screening of a Novel Upregulated lncRNA, A2M-AS1, That Promotes Invasion and Migration and Signifies Poor Prognosis in Breast Cancer
Cited by: 11
Author(s): Kai Fang, Chen Hu, Xiufen Zhang, Zijian Guo, Lihua Li
Software Mentions: 2
Published: over 6 years ago

10.1155/2019/2579734

Pathogenic Effects and Potential Regulatory Mechanisms of Tea Polyphenols on Obesity
Cited by: 0
Author(s): Zhandong Li, Yue Liu, Weihao Zhao, Xiuhua Wu, Xiujuan Jiang, Lili Yang, Chaoqun Xing, You Li-xin, Jiwei Song, Hao Li
Software Mentions: 2
Published: about 7 years ago

10.1038/s41598-017-18773-1

Identification and validation of an 18-gene signature highly-predictive of bladder cancer metastasis
Cited by: 8
Author(s): Beihe Wang, Fangning Wan, Haoyue Sheng, Yiping Zhu, Guohai Shi, Ye Zhang, Bo Dai, Yijun Shen, Yao Zhu, Dingwei Ye
Software Mentions: 2
Published: over 8 years ago

10.1155/2020/9568976

MicroRNA-148b Inhibits the Malignant Biological Behavior of Melanoma by Reducing Sirtuin 7 Expression Levels
Cited by: 2
Author(s): Rui Sun, Meiliang Guo, Xiaojing Fan, Qinqin Meng, Ding Yuan, Xin–Rong Yang, Kexiang Yan, Hui Deng
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-018-20935-8

Impact of mid-season sulphur deficiency on wheat nitrogen metabolism and biosynthesis of grain protein
Cited by: 39
Author(s): Zitong Yu, Angéla Juhász, Shahidul Islam, Dean Diepeveen, Jingjuan Zhang, Penghao Wang, Wujun Ma
Software Mentions: 2
Published: over 8 years ago

10.3390/ani10060935

Ruminal Methanogenic Responses to the Thiamine Supplementation in High-Concentrate Diets
Cited by: 2
Author(s): Fuguang Xue, Yue Wang, Yiguang Zhao, Xuemei Nan, Dengke Hua, Fuyu Sun, Liguo Yang, Linshu Jiang, Benhai Xiong
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-018-22753-4

Allele-specific expression in a family quartet with autism reveals mono-to-biallelic switch and novel transcriptional processes of autism susceptibility genes
Cited by: 13
Author(s): Chun‐Yen Lin, Kai Wei Chang, Chia Yi Lin, Jia Ying Wu, Hilary Coon, Pei Hsin Huang, Hong Nerng Ho, Schahram Akbarian, Susan Shur‐Fen Gau, Hsien-Sung Huang
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-018-23189-6

The role of cuticular hydrocarbons in mate recognition in Drosophila suzukii
Cited by: 50
Author(s): Yannick Snellings, Beatriz Herrera, Bruna Wildemann, Melissa Beelen, Liesbeth Zwarts, Tom Wenseleers, Patrick Callaerts
Software Mentions: 2
Published: over 8 years ago

10.1155/2020/2383516

Identification of Functional Genes in Pterygium Based on Bioinformatics Analysis
Cited by: 6
Author(s): Yuting Xu, Chen Qiao, Siying He, Lu Chen, Shiqi Dong, Xiying Wu, Ming Yan, Fang Zheng
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-018-26718-5

Transcriptome analysis of the reef-building octocoral, Heliopora coerulea
Cited by: 16
Author(s): Christine Guzman, Chuya Shinzato, Tsai-Ming Lu, Cecilia Conaco
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-018-27479-x

Damage-associated molecular pattern recognition is required for induction of retinal neuroprotective pathways in a sex-dependent manner
Cited by: 6
Author(s): Marcus Hooper, Jiangang Wang, Robert Browning, John D. Ash
Software Mentions: 2
Published: about 8 years ago

10.1155/2020/9601876

Serum miR-1228-3p and miR-181a-5p as Noninvasive Biomarkers for Non-Small Cell Lung Cancer Diagnosis and Prognosis
Cited by: 21
Author(s): Weixiao Xue, Meng-Yu Zhang, Rui Li, Xiao Liu, Yunhong Yin, Yi-Qing Qu
Software Mentions: 2
Published: about 6 years ago

10.3390/ani11082243

Bacterial Community Characteristics in the Gastrointestinal Tract of Yak (Bos grunniens) Fully Grazed on Pasture of the Qinghai-Tibetan Plateau of China
Cited by: 5
Author(s): Xueping Han, Hongjin Liu, Linyong Hu, Na Zhao, Shixiao Xu, Zhien Lin, Yongwei Chen
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-018-31432-3

Metabolome and molecular basis for carbohydrate increase and nitrate reduction in burley tobacco seedlings by glycerol through upregulating carbon and nitrogen metabolism
Cited by: 8
Author(s): Yafei Li, Dong Chil Chang, Huijuan Yang, Jing Wang, Hongzhi Shi
Software Mentions: 2
Published: about 8 years ago

10.1155/2019/6706354

Integrative Analysis Reveals Comprehensive Altered Metabolic Genes Linking with Tumor Epigenetics Modification in Pan-Cancer
Cited by: 6
Author(s): Yahui Shi, Jinjia Wei, Zixi Chen, Yuhong Yuan, Xingsong Li, Yanyu Zhang, Yuhuan Meng, Yumin Hu, Hongli Du
Software Mentions: 2
Published: almost 7 years ago

10.18632/aging.202792

A novel immune-related prognostic signature in epithelial ovarian carcinoma
Cited by: 7
Author(s): Tong Su, Panpan Zhang, Fu-Jun Zhao, Shu Zhang
Software Mentions: 2
Published: over 5 years ago

10.1155/2021/6626094

Screening of Hub Genes Associated with Pulmonary Arterial Hypertension by Integrated Bioinformatic Analysis
Cited by: 9
Author(s): Yu Zeng, Nanhong Li, Zhenzhen Zheng, Riken Chen, Min Peng, Wang Liu, Jiang Zhu, Mingqing Zeng, Junfen Cheng, Cheng Hong
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-018-34614-1

Genome-wide Identification of Jatropha curcas MAPK, MAPKK, and MAPKKK Gene Families and Their Expression Profile Under Cold Stress
Cited by: 17
Author(s): Haibo Wang, Ming Gong, Junyun Guo, Hu Xiu, Yong Gao, Chao Liu, Dong-Qin Dai, Lizhou Tang
Software Mentions: 2
Published: almost 8 years ago

10.1038/s41598-018-37565-9

Environmental filtering of bacterial functional diversity along an aridity gradient
Cited by: 14
Author(s): Huacan Song, Yu Shi, Teng Yang, Haiyan Chu, Jin‐Sheng He, Hyoki Kim, Piotr G. Jabłoński, Jonathan M. Adams
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-018-38186-y

Human macrophages survive and adopt activated genotypes in living zebrafish
Cited by: 18
Author(s): Colin D. Paul, Alexus Devine, Kevin Bishop, Qing Xu, William J. Wulftange, Hannah A. Burr, Kathryn M. Daly, Chaunte Lewis, Daniel S. Green, Jack R. Staunton, Swati Choksi, Zheng-gang Liu, Kandice Tanner
Software Mentions: 2
Published: over 7 years ago

10.1186/s13293-020-00343-2

MicroRNA profiling of the pig periaqueductal grey (PAG) region reveals candidates potentially related to sex-dependent differences
Cited by: 0
Author(s): Klaudia Pawlina-Tyszko, Maria Oczkowicz, Artur Gurgul, Tomasz Szmatoła, Monika Bugno‐Poniewierska
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-019-43025-9

Fungal Elevational Rapoport pattern from a High Mountain in Japan
Cited by: 29
Author(s): Matthew Chidozie Ogwu, Koichi Takahashi, Ke Dong, Huacan Song, Itumeleng Moroenyane, Bruce Waldman, Jonathan M. Adams
Software Mentions: 2
Published: over 7 years ago

10.1242/bio.058676

Dorso-ventral heterogeneity in tracheal basal stem cells
Cited by: 2
Author(s): Tomomi Tadokoro, Keisuke Tanaka, Shun Osakabe, Mimoko Kato, Hisato Kobayashi, Brigid L.M. Hogan, Hideki Taniguchi
Software Mentions: 2
Published: almost 5 years ago

10.1016/j.bbalip.2017.11.005

Specific oxygenation of plasma membrane phospholipids by Pseudomonas aeruginosa lipoxygenase induces structural and functional alterations in mammalian cells
Cited by: 24
Author(s): Maceler Aldrovandi, Swathi Banthiya, Sven W. Meckelmann, You Zhou, Dagmar Heydeck, Valerie Bridget O'Donnell, Hartmut Kühn
Software Mentions: 2
Published: over 8 years ago

10.1186/s12917-018-1696-5

Metagenomic analysis of captive Amur tiger faecal microbiome
Cited by: 17
Author(s): Fengping He, Dan Liú, Le Zhang, Jiancheng Zhai, Yue Ma, Yanchun Xu, Guangshun Jiang, Ke Rong, Jingyun Ma
Software Mentions: 2
Published: almost 8 years ago

10.1038/s41598-019-47332-z

Roux-Y Gastric Bypass and Sleeve Gastrectomy directly change gut microbiota composition independent of surgery type
Cited by: 53
Author(s): Fernanda L. Paganelli, Misha D. P. Luyer, C. Marijn Hazelbag, Hae‐Won Uh, Malbert R. C. Rogers, Danielle Adriaans, Roos-Marijn Berbers, Antoni P. A. Hendrickx, Marco C. Viveen, James Groot, Marc J. M. Bonten, Ad C. Fluit, Rob J. L. Willems, Helen L. Leavis
Software Mentions: 2
Published: about 7 years ago

10.1038/s41598-019-47950-7

The large repertoire of conifer NLR resistance genes includes drought responsive and highly diversified RNLs
Cited by: 42
Author(s): Cyril Van Ghelder, Gérard Parent, Philippe Rigault, Julien Prunier, Isabelle Giguère, S. Caron, Juliana Stival Sena, Annie Deslauriers, Jean Bousquet, Daniel Esmenjaud, John J. MacKay
Software Mentions: 2
Published: about 7 years ago

10.1186/1752-0509-9-S3-S5

A knowledge base for Vitis vinifera functional analysis
Cited by: 13
Author(s): Alfredo Pulvirenti, Rosalba Giugno, Rosario Distefano, Giuseppe Pigola, Misael Mongiovì, Girolamo Giudice, Vera Vendramin, Alfio Lombardo, Federica Cattonaro, Alfredo Ferro
Software Mentions: 2
Published: over 11 years ago

10.1038/s41598-019-48904-9

Enhanced dechlorination and biodegradation of 2-chloroaniline by a 2-aminoanthraquinone-graphene oxide composite under anaerobic conditions
Cited by: 5
Author(s): Hong Lü, Tiantian Zhang, Yang Zhou, Jiti Zhou, Jing Wang, Xiaolei Wang
Software Mentions: 2
Published: about 7 years ago

10.1186/s12900-018-0096-1

Deciphering evolution of immune recognition in antibodies
Cited by: 4
Author(s): Harmeet Kaur, Neetu Sain, Debasisa Mohanty, Dinakar M. Salunke
Software Mentions: 2
Published: almost 8 years ago

10.1186/s12890-021-01655-8

DNA methylation and gene expression profiles to identify childhood atopic asthma associated genes
Cited by: 4
Author(s): Rui Chen, Li-Zhen Piao, Ling Liu, Xiaofei Zhang
Software Mentions: 2
Published: almost 5 years ago

10.1186/s12870-019-1644-y

Elevated CO2 concentration promotes photosynthesis of grape (Vitis vinifera L. cv. ‘Pinot noir’) plantlet in vitro by regulating RbcS and Rca revealed by proteomic and transcriptomic profiles
Cited by: 25
Author(s): Xin Zhao, Wenfang Li, Ying Wang, Zhiying Ma, Shuai Yang, Qi Zhou, Juan Mao, Baihong Chen
Software Mentions: 2
Published: over 7 years ago

10.1186/s12870-021-03068-5

Transcriptomics identifies key defense mechanisms in rice resistant to both leaf-feeding and phloem feeding herbivores
Cited by: 7
Author(s): Yang Li, Boon Huat Cheah, Yu-Fu Fang, Yun-Hung Kuang, Shu Wha Lin, Chung-Ta Liao, Sheng-Lung Huang, Ya-Fen Lin, Wen-Po Chuang
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-019-55869-2

Multi-omics analysis of multiple missions to space reveal a theme of lipid dysregulation in mouse liver
Cited by: 43
Author(s): Afshin Beheshti, Kaushik Chakravarty, Homer Fogle, Hossein Fazelinia, Willian A. da Silveira, Valery Boyko, San-Huei Lai Polo, Amanda Saravia-Butler, Gary Hardiman, Deanne Taylor, Jonathan M. Galazka, Sylvain V. Costes
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-019-56367-1

Characterization of a five-microRNA signature as a prognostic biomarker for esophageal squamous cell carcinoma
Cited by: 13
Author(s): Jun Yu, Ming Zhu, Min Lv, Xiaoliu Wu, Xiaomei Zhang, Yuanying Zhang, Jintian Li, Qin Zhang
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-019-56290-5

Fungal and bacterial diversity of Svalbard subglacial ice
Cited by: 44
Author(s): Laura Perini, Cene Gostinčar, Nina Gunde‐Cimerman
Software Mentions: 2
Published: over 6 years ago

10.1186/s12870-020-02464-7

The transcriptional reprograming and functional identification of WRKY family members in pepper’s response to Phytophthora capsici infection
Cited by: 16
Author(s): Cheng Wei, Yan Jiang, Jiangtao Peng, Jianwen Guo, Menglan Lin, Chengting Jin, Jinfeng Huang, Weiqi Tang, Deyi Guan, Shuilin He
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-019-57182-4

Metabolomic networks and pathways associated with feed efficiency and related-traits in Duroc and Landrace pigs
Cited by: 23
Author(s): Victor Adriano Okstoft Carmelo, Priyanka Banerjee, Wellison J. S. Diniz, Haja N. Kadarmideen
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-019-55013-0

Fibroblasts in urothelial bladder cancer define stroma phenotypes that are associated with clinical outcome
Cited by: 36
Author(s): Artur Mezheyeuski, Ulrika Segersten, Lina Leiss, Per‐Uno Malmström, Jiřı́ Hatina, Arne Östman, Carina Strell
Software Mentions: 2
Published: over 6 years ago

10.1186/s42523-020-00041-9

Microbiome–host co-oscillation patterns in remodeling of colonic homeostasis during adaptation to a high-grain diet in a sheep model
Cited by: 8
Author(s): Limei Lin, Yue Wang, Liping Xu, Junhua Liu, Weiyun Zhu, Shengyong Mao
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-020-58163-8

Defining the Environmental Adaptations of Genus Devosia: Insights into its Expansive Short Peptide Transport System and Positively Selected Genes
Cited by: 46
Author(s): Chandni Talwar, Shekhar Nagar, Roshan Kumar, Joy Scaria, Rup Lal, Ram Krishan Negi
Software Mentions: 2
Published: over 6 years ago

Projects: cran: pheatmap

Science Score: 75/100

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Papers Mentioning pheatmap 2,572