Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: pastecs
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/pastecs
Package for Analysis of Space-Time Ecological Series
18 versions
Latest release: over 6 years ago
16 dependent packages
24,170 downloads last month
Papers Mentioning pastecs 44
10.1186/s12864-016-3387-6
HiC-bench: comprehensive and reproducible Hi-C data analysis designed for parameter exploration and benchmarkingCited by: 64
Author(s): Charalampos Lazaris, Stephen M. Kelly, Panagiotis Ntziachristos, Iannis Aifantis, Aristotelis Tsirigos
Software Mentions: 28
Published: over 7 years ago
10.1080/17453674.2020.1846956
Uncemented or cemented stems in first-time revision total hip replacement? An observational study of 867 patients including assessment of femoral bone defect sizeCited by: 7
Author(s): Yosef Tyson, Christer Hillman, Norbert Majenburg, Olof Sköldenberg, Ola Rolfson, Johan Kärrholm, Maziar Mohaddes, Nils P Hailer
Software Mentions: 16
Published: almost 4 years ago
10.1186/s12894-019-0479-z
Where is the limit of prostate cancer biomarker research? Systematic investigation of potential prognostic and diagnostic biomarkersCited by: 2
Author(s): Anika Kremer, Tobias Kremer, Glen Kristiansen, Yuri Tolkach
Software Mentions: 11
Published: over 5 years ago
10.1007/s00702-021-02350-y
The impact of maternal care and blood glucose availability on the cortisol stress response in fasted womenCited by: 6
Author(s): Ulrike U. Bentele, Maria Meier, Annika Benz, Bernadette Denk, Stephanie J. Dimitroff, Jens C. Pruessner, Eva Unternäehrer
Software Mentions: 9
Published: over 3 years ago
10.1111/1744-7917.12606
The price of protection: a defensive endosymbiont impairs nymph growth in the bird cherry‐oat aphid, <i>Rhopalosiphum padi</i>Cited by: 30
Author(s): Daniel J. Leybourne, Jorunn I. B. Bos, Tracy A. Valentine, Alison J. Karley
Software Mentions: 9
Published: about 6 years ago
10.1093/cid/ciz143
Seroprotection at Different Levels of the Healthcare System After Routine Vaccination With Diphtheria-Tetanus-Pertussis whole cell–Hepatitis B–Haemophilus influenzae Type B in Lao People’s Democratic RepublicCited by: 10
Author(s): Lisa Hefele, Sengdavanh Syphan, Dalouny Xayavong, Anousin Homsana, Daria Kleine, Phetsavanh Chanthavilay, Phonethipsavanh Nouanthong, Kinnaly Xaydalasouk, Outavong Phathammavong, Somxay Billamay, Anonh Xeuatvongsa, Daniel Reinharz, Claude P. Muller, Antony P. Black
Software Mentions: 8
Published: over 5 years ago
10.1371/journal.pone.0216485
Understanding heterogeneous tumor microenvironment in metastatic melanomaCited by: 31
Author(s): Yiyi Yan, Alexey A. Leontovich, Michael J. Gerdes, Keyur Desai, Jinhong Dong, Anup Sood, Alberto Santamaría-Pang, Aaron S. Mansfield, Chrystal Chadwick, Rong Zhang, Wendy K. Nevala, Thomas J. Flotte, Fiona Ginty, Svetomir N. Markovic
Software Mentions: 8
Published: over 5 years ago
10.1038/s41398-020-01176-8
The placenta protects the fetal circulation from anxiety-driven elevations in maternal serum levels of brain-derived neurotrophic factorCited by: 7
Author(s): Hayley Dingsdale, Xinsheng Nan, Samantha M. Garay, Annett Mueller, Lorna Sumption, Pedro Chacón-Fernández, Isabel Martinez‐Garay, Cédric Ghevaert, Yves‐Alain Barde, John Roshan
Software Mentions: 7
Published: over 3 years ago
10.1001/jamanetworkopen.2019.4392
Association of Data Integration Technologies With Intensive Care Clinician PerformanceCited by: 7
Author(s): Ying Ling Lin, Patricia Trbovich, Lauren Kolodzey, Cheri Nickel, Anne‐Marie Guerguerian
Software Mentions: 7
Published: over 5 years ago
10.1038/s41598-021-97678-6
Neutrophil-to-lymphocyte ratio and monocyte-to-lymphocyte ratio predict length of hospital stay in myocarditisCited by: 16
Author(s): Moritz Mirna, Lukas Schmutzler, Albert Topf, Uta C. Hoppe, Michael Lichtenauer
Software Mentions: 7
Published: almost 3 years ago
10.3389/fnagi.2019.00203
Revisiting the MotionWatch8©: Calibrating Cut-Points for Measuring Physical Activity and Sedentary Behavior Among Adults With StrokeCited by: 6
Author(s): Ryan S. Falck, John R. Best, Michael C. R. Li, Janice J. Eng, Teresa Liu-Ambrose
Software Mentions: 7
Published: about 5 years ago
10.1002/evl3.13
Experimental evolution reveals that sperm competition intensity selects for longer, more costly spermCited by: 44
Author(s): Joanne L. Godwin, Ramakrishnan Vasudeva, Łukasz Michalczyk, Oliver Y. Martin, Alyson J. Lumley, Tracey Chapman, Matthew J. G. Gage
Software Mentions: 6
Published: over 7 years ago
10.1186/s12968-015-0217-y
Mapping tissue inhomogeneity in acute myocarditis: a novel analytical approach to quantitative myocardial edema imaging by T2-mappingCited by: 51
Author(s): Bettina Baeßler, Frank Schaarschmidt, Anastasia Dick, Christian Stehning, Bernhard Schnackenburg, Guido Michels, David Maintz, Alexander C. Bunck
Software Mentions: 6
Published: almost 9 years ago
10.1371/journal.pone.0170691
Asphyxia in the Newborn: Evaluating the Accuracy of ICD Coding, Clinical Diagnosis and Reimbursement: Observational Study at a Swiss Tertiary Care Center on Routinely Collected Health Data from 2012-2015Cited by: 18
Author(s): Olga Endrich, Carole Rimle, Marcel Zwahlen, Karen Triep, Luigi Raio, Mathias Nelle
Software Mentions: 6
Published: over 7 years ago
10.3390/s120608145
Accuracy and Precision of Equine Gait Event Detection during Walking with Limb and Trunk Mounted Inertial SensorsCited by: 49
Author(s): E. G. J. Olsen, Pia Haubro Andersen, Thilo Pfau
Software Mentions: 5
Published: about 12 years ago
10.3389/fneur.2019.00103
Vocational Rehabilitation in Mild Traumatic Brain Injury: Supporting Return to Work and Daily Life FunctioningCited by: 6
Author(s): Frederik Lehman Dornonville de la Cour, Morten Arendt Rasmussen, Eva Meldal Foged, Line Svenning Jensen, Trine Schow
Software Mentions: 5
Published: over 5 years ago
10.3390/ani10071164
Reproduction Indicators Related to Litter Size and Reproduction Cycle Length Among Sows of Breeds Considered Maternal and Paternal Components Kept on Medium-Size FarmsCited by: 8
Author(s): Błażej Nowak, Anna Mucha, Magdalena Moska, Wojciech Kruszyński
Software Mentions: 5
Published: about 4 years ago
10.1016/j.heliyon.2020.e04354
The coverage of environmental issues in FM radios in Nepal: the current status and challengesCited by: 1
Author(s): Prakash Kumar Paudel, Rabin Bastola, Pashe Tamang Lopchan
Software Mentions: 5
Published: about 4 years ago
10.1186/s12917-016-0723-7
Implementation of an extended ZINB model in the study of low levels of natural gastrointestinal nematode infections in adult sheepCited by: 7
Author(s): Marina Atlija, Joaquín M. Prada, Beatriz Gutiérrez-Gil, F.A. Rojo-Vázquez, M. J. Stear, J. J. Arranz, María Martínez‐Valladares
Software Mentions: 5
Published: about 8 years ago
10.1155/2019/3983869
A Multilevel Analysis of Regressors of Access to Improved Drinking Water and Sanitation Facilities in GhanaCited by: 25
Author(s): Pascal Agbadi, Ernest Darkwah, Paul Lawer Kenney
Software Mentions: 4
Published: over 5 years ago
10.1186/s12968-017-0387-x
A novel multiparametric imaging approach to acute myocarditis using T2-mapping and CMR feature trackingCited by: 30
Author(s): Bettina Baeßler, Melanie Treutlein, Frank Schaarschmidt, Christian Stehning, Bernhard Schnackenburg, Guido Michels, David Maintz, Alexander C. Bunck
Software Mentions: 4
Published: almost 7 years ago
10.3390/cancers13184539
Atomic Force Microscope Nanoindentation Analysis of Diffuse Astrocytic Tumor Elasticity: Relation with Tumor HistopathologyCited by: 4
Author(s): Abraham Tsitlakidis, Anastasia Tsingotjidou, Aristeidis Κritis, Angeliki Cheva, Panagiotis Selviaridis, Elias C. Aifantis, Nicolas Foroglou
Software Mentions: 4
Published: almost 3 years ago
10.1098/rsos.171571
Testing social learning of anti-predator responses in juvenile jackdaws: the importance of accounting for levels of agitationCited by: 17
Author(s): Guillam E. McIvor, Victoria E. Lee, Alex Thornton
Software Mentions: 4
Published: over 6 years ago
10.1007/s10764-018-0069-z
Food-Offering Calls in Wild Golden Lion Tamarins (Leontopithecus rosalia): Evidence for Teaching Behavior?Cited by: 9
Author(s): Camille A. Troisi, William Hoppitt, Carlos R. Ruiz‐Miranda, Kevin N. Laland
Software Mentions: 4
Published: almost 6 years ago
10.1098/rsif.2021.0058
Gravity and active acceleration limit the ability of killer flies ( <i>Coenosia attenuata</i> ) to steer towards prey when attacking from aboveCited by: 3
Author(s): Sergio Rossoni, Samuel T. Fabian, Gregory P. Sutton, Paloma T. Gonzalez-Bellido
Software Mentions: 3
Published: over 3 years ago
10.3390/ani9050207
Selection Decisions and Trait Preferences for Local and Imported Cattle and Sheep Breeds in Peri-/Urban Livestock Production Systems in Ouagadougou, Burkina FasoCited by: 4
Author(s): Regina Roessler
Software Mentions: 3
Published: over 5 years ago
10.3390/ani10112063
Relationships between Selected Physiological Factors and Milking Parameters for Cows Using a Milking RobotCited by: 2
Author(s): M. Kuczaj, Anna Mucha, Alicja Kowalczyk, R. Mordak, Ewa Czerniawska-Piątkowska
Software Mentions: 3
Published: almost 4 years ago
10.5194/aab-63-277-2020
Drip loss assessment by EZ and bag methods and their relationship with pH value and color in muttonCited by: 4
Author(s): Ana Kaić, Ante Kasap, Ivan Širić, Boro Mioč
Software Mentions: 3
Published: about 4 years ago
10.1186/1471-2164-15-717
HGTector: an automated method facilitating genome-wide discovery of putative horizontal gene transfersCited by: 97
Author(s): Quanyin Zhu, Michael Kosoy, Katharina Dittmar
Software Mentions: 3
Published: over 10 years ago
10.1007/s00268-018-4697-4
Prospective Risk Factor Analysis for the Development of Post-operative Urinary Retention Following Ambulatory General SurgeryCited by: 21
Author(s): Alasdair Scott, Sam Mason, A. J. Langdon, Bhaveshkumar Patel, Erik Mayer, Krishna Moorthy, Sanjay Purkayastha
Software Mentions: 3
Published: about 6 years ago
10.1371/journal.pone.0152892
Measuring Psychological Capital: Construction and Validation of the Compound PsyCap Scale (CPC-12)Cited by: 104
Author(s): Timo Lorenz, Clemens Beer, Jan Pütz, Kathrin Heinitz
Software Mentions: 3
Published: over 8 years ago
10.3389/fgene.2021.663557
Genome-Wide Association Mapping of Seedling Biomass and Root Traits Under Different Water Conditions in WheatCited by: 1
Author(s): Iza Fatima, Yutian Gao, Xiangru Xu, Jingjing Jin, Shuonan Duan, Wenchao Zhen, Chaojie Xie, Jun Ma
Software Mentions: 3
Published: over 3 years ago
10.1038/s41598-019-55338-w
Genome wide association study of 5 agronomic traits in olive (Olea europaea L.)Cited by: 17
Author(s): Hilal Betül Kaya, Deniz Akdemir, Roberto Lozano, Öznur Çetin, Hulya Sozer Kaya, Mustafa Şahi̇n, Jenny L. Smith, Bahattin Tanyolaç, Jean‐Luc Jannink
Software Mentions: 3
Published: over 4 years ago
10.3390/toxins13020084
Metabolism of Zearalenone in the Rumen of Dairy Cows with and without Application of a Zearalenone-Degrading EnzymeCited by: 16
Author(s): Christiane Gruber-Dorninger, Johannes Faas, Barbara Doupovec, Markus Aleschko, Christian Stoiber, Andreas Höbartner-Gußl, Karin Schöndorfer, Manuela Killinger, Qendrim Zebeli, Dian Schatzmayr
Software Mentions: 3
Published: over 3 years ago
10.1098/rsos.192015
A novel test of flexible planning in relation to executive function and language in young childrenCited by: 3
Author(s): Rachael Miller, Anna Frohnwieser, Ning Ding, Camille A. Troisi, Martina Schiestl, Romana Gruber, Alex H. Taylor, Sarah A. Jelbert, Markus Boeckle, Nicola S. Clayton
Software Mentions: 2
Published: over 4 years ago
10.1002/cam4.442
Molecular portrait of breast cancer in China reveals comprehensive transcriptomic likeness to Caucasian breast cancer and low prevalence of luminal A subtypeCited by: 27
Author(s): Xiaoyan Huang, Matteo Dugo, Maurizio Callari, Marco Sandri, Loris De Cecco, Barbara Valeri, Maria Luisa Carcangiu, Jian Xue, Rui Bi, Silvia Veneroni, Maria Grazia Daidone, Sylvie Ménard, Elda Tagliabue, Zhimin Shao, Jiong Wu, Rosaria Orlandi
Software Mentions: 2
Published: over 9 years ago
10.3390/ijerph15071521
Differences of Four Work-Related Behavior and Experience Patterns in Work Ability and Other Work-Related Perceptions in a Finance CompanyCited by: 5
Author(s): Jan-Bennet Voltmer, Edgar Voltmer, Jürgen Deller
Software Mentions: 2
Published: about 6 years ago
10.1186/s42238-020-00025-1
Ohio physician attitudes toward medical Cannabis and Ohio’s medical marijuana programCited by: 16
Author(s): Emilia Lombardi, Joshua Gunter, Erin Tanner
Software Mentions: 2
Published: over 4 years ago
10.1038/s41598-019-47829-7
Protein Complex Identification and quantitative complexome by CN-PAGECited by: 22
Author(s): Michał Górka, Corné Swart, Beata Siemiątkowska, Silvia Martínez-Jaime, Aleksandra Skirycz, Sebastian Streb, Alexander Graf
Software Mentions: 2
Published: about 5 years ago
10.1186/s12917-017-1077-5
Cavalier King Charles Spaniels with Chiari-like malformation and Syringomyelia have increased variability of spatio-temporal gait characteristicsCited by: 8
Author(s): E. G. J. Olsen, Emma Jane Suiter, Thilo Pfau, Imelda M. McGonnell, Kaspar Matiasek, A. A. Giejda, Holger A. Volk
Software Mentions: 2
Published: over 7 years ago
10.3390/v13071217
Isolation and Characterization of Phages Active against Paenibacillus larvae Causing American Foulbrood in Honeybees in PolandCited by: 8
Author(s): Ewa Jończyk‐Matysiak, Barbara Owczarek, Ewa Popiela-Pleban, Kinga Świtała-Jeleń, Paweł Migdał, Martyna Cieślik, Norbert Łodej, Dominika Kula, J. Neuberg, Katarzyna Hodyra-Stefaniak, Marta Kaszowska, Filip Orwat, Natalia Bagińska, Anna Mucha, Agnieszka Belter, Mirosława Skupińska, Barbara Bubak, Wojciech Fortuna, Sławomir Letkiewicz, Paweł Chorbiński, Beata Weber‐Dąbrowska, Adam Roman, Andrzej Górski
Software Mentions: 2
Published: about 3 years ago
10.1016/j.dib.2019.104004
Descriptive statistics and visualization of data from the R datasets package with implications for clusterabilityCited by: 35
Author(s): Naomi C. Brownstein, Andreas Adolfsson, Margareta Ackerman
Software Mentions: 1
Published: about 5 years ago
10.1371/journal.pone.0237322
Spatial-temporal clusters of host-seeking Aedes albopictus, Aedes japonicus, and Aedes triseriatus collections in a La Crosse virus endemic county (Knox County, Tennessee, USA)Cited by: 7
Author(s): Reim Rowe, Agricola Odoi, Dave Paulsen, Abelardo C. Moncayo, Rebecca Trout Fryxell
Software Mentions: 1
Published: about 4 years ago
10.1186/s40575-017-0043-7
Genetic mapping of principal components of canine pelvic morphologyCited by: 7
Author(s): Mark J. Fealey, Joy Li, Rebel J. E. Todhunter, Ursula Krotscheck, Kei Hayashi, Marina J. McConkey, Adam R. Boyko, Jessica J. Hayward, Rory J. Todhunter
Software Mentions: 1
Published: over 7 years ago