Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: pagoda2

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/pagoda2

Single Cell Analysis and Differential Expression
12 versions
Latest release: over 1 year ago
3 dependent packages
725 downloads last month

Papers Mentioning pagoda2 4

Sphingosine 1-phosphate-regulated transcriptomes in heterogenous arterial and lymphatic endothelium of the aorta
Cited by: 28
Author(s): Eric Engelbrecht, Michel V. Levesque, Liqun He, Michael Vanlandewijck, Anja Nitzsche, Hira Niazi, Andrew Kuo, Sasha A Singh, Masamichi Aikawa, Kristina M. Holton, Richard L. Proia, Mari Kono, William T. Pu, Eric Camerer, Christer Betsholtz, Timothy Hla
Software Mentions: 8
Published: over 4 years ago

10.15252/embj.2020107100

<i>De novo</i> DNA methylation controls neuronal maturation during adult hippocampal neurogenesis
Cited by: 17
Author(s): Sara Zocher, Rupert W. Overall, Gabriel Berdugo-Vega, Nicole Rund, Anne Karasinsky, Vijay S. Adusumilli, Christina Steinhauer, Sina Scheibenstock, Kristian Händler, Joachim L. Schultze, Federico Calegari, Gerd Kempermann
Software Mentions: 6
Published: over 3 years ago

10.3390/genes11070792

Integrating Deep Supervised, Self-Supervised and Unsupervised Learning for Single-Cell RNA-seq Clustering and Annotation
Cited by: 21
Author(s): Liang Chen, Yuyao Zhai, Qiuyan He, Weinan Wang, Minghua Deng
Software Mentions: 5
Published: over 4 years ago

10.1186/s13059-021-02267-5

Single-cell proteomic and transcriptomic analysis of macrophage heterogeneity using SCoPE2
Cited by: 255
Author(s): Harrison Specht, Edward Emmott, Aleksandra A. Petelski, R. Gray Huffman, David H. Perlman, Marco Serra, Peter V. Kharchenko, Antonius Koller, Nikolai Slavov
Software Mentions: 1
Published: almost 4 years ago