Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.15252/embj.2020107100

https://doi.org/10.15252/embj.2020107100

<i>De novo</i> DNA methylation controls neuronal maturation during adult hippocampal neurogenesis

Cited by: 17
Author(s): Sara Zocher, Rupert W. Overall, Gabriel Berdugo-Vega, Nicole Rund, Anne Karasinsky, Vijay S. Adusumilli, Christina Steinhauer, Sina Scheibenstock, Kristian Händler, Joachim L. Schultze, Federico Calegari, Gerd Kempermann
Published: over 3 years ago

Software Mentions 6

bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: methylKit
DNA methylation analysis from high-throughput bisulfite sequencing results
Papers that mentioned: 154
bioconductor: zinbwave
Zero-Inflated Negative Binomial Model for RNA-Seq Data
Papers that mentioned: 12
cran: pagoda2
Single Cell Analysis and Differential Expression
Papers that mentioned: 4
cran: SEA
Segregation Analysis
Papers that mentioned: 238
pypi: kallisto
The Kallisto software enables the efficient calculation of atomic features that can be used within a quantitative structure-activity relationship (QSAR) approach. Furthermore, several modelling helpers are implemented.
Papers that mentioned: 307