Projects: cran: pROC
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/pROC
Display and Analyze ROC Curves
38 versions
Latest release: almost 3 years ago
137 dependent packages
199,952 downloads last month
Enhanced Analysis
Repository Activity:
README Analysis:
DOI Found
Science Score: 95/100
Starting Score: 100 points
Bonuses:
-
+6
Science terms in README
3 scientific terms found in README -
+20
DOI references
2 DOI references found in README
Penalties:
-
-15
No science keywords
No scientific terms found in keywords/classifiers -
-10
No science terms in description
No scientific terms found in description
Very Likely Science (95)
Papers Mentioning pROC 1,740
10.1186/s12874-019-0681-4
Machine learning in medicine: a practical introductionCited by: 526
Author(s): Jenni A. M. Sidey-Gibbons, Chris Sidey‐Gibbons
Software Mentions: 7
Published: over 7 years ago
10.1371/journal.pmed.1002699
Deep-learning-assisted diagnosis for knee magnetic resonance imaging: Development and retrospective validation of MRNetCited by: 385
Author(s): Nicholas Bien, Pranav Rajpurkar, Robyn L. Ball, Jeremy Irvin, Allison Park, Erik Jones, Michael Bereket, Bhavik N. Patel, Kristen W. Yeom, Katie Shpanskaya, Safwan Halabi, Evan J. Zucker, Gary S. Fanton, Derek F. Amanatullah, Christopher F. Beaulieu, Geoffrey M. Riley, Russell J. Stewart, Francis G. Blankenberg, David B. Larson, Ricky Jones, Curtis P. Langlotz, Andrew Y. Ng, Matthew P. Lungren
Software Mentions: 7
Published: almost 8 years ago
10.18632/aging.203017
Identification of key transcriptome biomarkers based on a vital gene module associated with pathological changes in Alzheimer’s diseaseCited by: 11
Author(s): Tong Zhang, Yang Shen, Yiqing Guo, Junyan Yao
Software Mentions: 7
Published: over 5 years ago
10.3389/fnagi.2019.00203
Revisiting the MotionWatch8©: Calibrating Cut-Points for Measuring Physical Activity and Sedentary Behavior Among Adults With StrokeCited by: 6
Author(s): Ryan S. Falck, John R. Best, Michael C. R. Li, Janice J. Eng, Teresa Liu-Ambrose
Software Mentions: 7
Published: about 7 years ago
10.1289/EHP333
DNA Methylation Score as a Biomarker in Newborns for Sustained Maternal Smoking during PregnancyCited by: 84
Author(s): Sarah E. Reese, Shanshan Zhao, Michael C. Wu, Bonnie R. Joubert, Christine Louise Parr, Siri Eldevik Håberg, Per Magne Ueland, Roy Miodini Nilsen, Øivind Midttun, Stein Emil Vollset, Shyamal D. Peddada, Wenche Nystad, Stephanie J. London
Software Mentions: 7
Published: over 9 years ago
10.1007/s12020-020-02434-x
Using The Cancer Genome Atlas data to refine the 8th edition of the American Joint Committee on Cancer staging for papillary thyroid carcinomaCited by: 3
Author(s): Anello Marcello Poma, Elisabetta Macerola, Liborio Torregrossa, Rossella Elisei, Ferruccio Santini, Fulvio Basolo
Software Mentions: 7
Published: about 6 years ago
10.7717/peerj.11105
The biosonar of the boto: evidence of differences among species of river dolphins (<i>Inia</i>spp.) from the AmazonCited by: 2
Author(s): Jéssica Fernandes de Melo, Thiago Orion Simões Amorim, Mariana Paschoalini, Artur Andriolo
Software Mentions: 7
Published: over 5 years ago
10.18632/aging.102571
Identification of molecular correlations of RBM8A with autophagy in Alzheimer's diseaseCited by: 40
Author(s): Donghua Zou, Rongjie Li, Xiaohua Huang, Guoying Chen, Ying Liu, Youshi Meng, Yimei Wang, Yuan Wu, Ying Mao
Software Mentions: 7
Published: almost 7 years ago
10.1007/s00330-020-07195-9
Improved differentiation between primary lung cancer and pulmonary metastasis by combining dual-energy CT–derived biomarkers with conventional CT attenuationCited by: 19
Author(s): Dominik Deniffel, Andreas Sauter, Alexander A. Fingerle, Ernst J. Rummeny, Marcus R. Makowski, Daniela Pfeiffer
Software Mentions: 7
Published: about 6 years ago
10.1007/s10120-021-01161-0
A novel combination of serum microRNAs for the detection of early gastric cancerCited by: 15
Author(s): Seiichiro Abe, Juntaro Matsuzaki, Kazuki Sudo, Ichiro Oda, Hitoshi Katai, Ken Kato, Satoko Takizawa, Hiromi Sanada, Fumitaka Takeshita, Shumpei Niida, Yutaka Saito, Takahiro Ochiya
Software Mentions: 7
Published: over 5 years ago
10.3389/fcell.2021.618313
Long Non-coding RNA Expression Patterns in Stomach Adenocarcinoma Serve as an Indicator of Tumor Mutation Burden and Are Associated With Tumor-Infiltrating Lymphocytes and Microsatellite InstabilityCited by: 6
Author(s): Dongdong Yang, Jianan Yu, Bing Han, Yue Sun, Steven Mo, Jing Hu
Software Mentions: 7
Published: over 5 years ago
10.1371/journal.pone.0189860
Survival analysis and classification methods for forest fire sizeCited by: 14
Author(s): Pier Olivier Tremblay, Thierry Duchesne, Steven G. Cumming
Software Mentions: 7
Published: almost 9 years ago
10.18632/aging.102518
A twenty gene-based gene set variation score reflects the pathological progression from cirrhosis to hepatocellular carcinomaCited by: 21
Author(s): Yan Lin, Rong Liang, Jiazhou Ye, Qian Li, Ziyu Liu, Xing Gao, Xuemin Piao, Rongyun Mai, Donghua Zou, Lianying Ge
Software Mentions: 7
Published: almost 7 years ago
10.3389/fonc.2020.00033
PLXNC1 Enhances Carcinogenesis Through Transcriptional Activation of IL6ST in Gastric CancerCited by: 9
Author(s): Jie Chen, Haining Liu, Jinggui Chen, Bo Sun, Jianghong Wu, Chunyan Du
Software Mentions: 7
Published: over 6 years ago
10.1186/s13075-016-1120-0
A discrete cluster of urinary biomarkers discriminates between active systemic lupus erythematosus patients with and without glomerulonephritisCited by: 25
Author(s): Carolina Landolt-Marticorena, Stephenie D. Prokopec, Stacey Morrison, Babak Noamani, Dennisse Bonilla, Heather N. Reich, James W. Scholey, Carmen Ávila-Casado, Paul R. Fortin, Paul C. Boutros, Joan E. Wither
Software Mentions: 7
Published: about 10 years ago
10.18632/aging.102506
Reactive oxygen species metabolism-based prediction model and drug for patients with recurrent glioblastomaCited by: 7
Author(s): Nian Tan, Jianwei Liu, Ping Li, Zhaohao Sun, Jianming Pan, Wei Zhao
Software Mentions: 7
Published: almost 7 years ago
10.3389/fonc.2020.538133
Behavior-Oriented Nomogram for the Stratification of Lower-Grade Gliomas to Improve Individualized TreatmentCited by: 6
Author(s): Ruo-Lun Wei, Liwei Zhang, Jianguo Li, Fengdong Yang, Yue Xue, Xinting Wei
Software Mentions: 7
Published: almost 6 years ago
10.3389/pore.2021.604730
Identification of Key Genes Involved in Pancreatic Ductal Adenocarcinoma with Diabetes Mellitus Based on Gene Expression Profiling AnalysisCited by: 4
Author(s): Wenbai Zhou, Yujing Wang, Hongmei Gao, Ying Jia, Yuanxin Xu, Xiaojing Wan, Zhiying Zhang, Haiqiao Yu, Shuang Yan
Software Mentions: 7
Published: over 5 years ago
10.1155/2021/9918498
Integrated Analysis of Weighted Gene Coexpression Network Analysis Identifying Six Genes as Novel Biomarkers for Alzheimer’s DiseaseCited by: 15
Author(s): Tingting Zhang, Nanyang Liu, Wei Wei, Zhen Zhang, Hao Li
Software Mentions: 7
Published: about 5 years ago
10.1186/s12935-021-02050-3
Constructe a novel 5 hypoxia genes signature for cervical cancerCited by: 13
Author(s): Yang Yang, Yaling Li, Ruiqun Qi, Lan Zhang
Software Mentions: 7
Published: over 5 years ago
10.1186/s12935-021-02212-3
Midkine promotes glioblastoma progression via PI3K-Akt signalingCited by: 14
Author(s): Beiquan Hu, Chao Qin, Li Li, Lei Wei, Xianlun Mo, Huasheng Fan, Yuanhua Lei, Feng Wang, Donghua Zou
Software Mentions: 7
Published: about 5 years ago
10.1371/journal.pone.0201016
Predicting hospital admission at emergency department triage using machine learningCited by: 155
Author(s): Woo Suk Hong, Adrian D. Haimovich, Richard A. Taylor
Software Mentions: 7
Published: about 8 years ago
10.3390/diagnostics11060981
Infrared Thermography as a Method of Verification in Raynaud’s PhenomenonCited by: 2
Author(s): Lotte Lindberg, Bent Bruun Kristensen, Ebbe Eldrup, Jane Frølund Thomsen, Lars Thorbjørn Jensen
Software Mentions: 7
Published: over 5 years ago
10.3390/diagnostics11030558
Characteristic Features of Infrared Thermographic Imaging in Primary Raynaud’s PhenomenonCited by: 3
Author(s): Lotte Lindberg, Bent Bruun Kristensen, Jane Frølund Thomsen, Ebbe Eldrup, Lars Thorbjørn Jensen
Software Mentions: 7
Published: over 5 years ago
10.1186/s12967-019-1909-0
ALS blood expression profiling identifies new biomarkers, patient subgroups, and evidence for neutrophilia and hypoxiaCited by: 38
Author(s): William R. Swindell, Colin Kruse, Edward O. List, Darlene E. Berryman, John J. Kopchick
Software Mentions: 7
Published: over 7 years ago
10.3389/fonc.2020.603717
Enhanced Angiogenesis in Salivary Duct Carcinoma Ex-Pleomorphic AdenomaCited by: 6
Author(s): Takayoshi Suzuki, Satoshi Kano, Masanobu Suzuki, Shinichiro Yasukawa, Takatsugu Mizumachi, Nobuko Tsushima, Kanako C. Hatanaka, Yutaka Hatanaka, Yoshihiro Matsuno, Akihiro Homma
Software Mentions: 7
Published: over 5 years ago
10.1186/s12967-020-02505-7
ANDC: an early warning score to predict mortality risk for patients with Coronavirus Disease 2019Cited by: 44
Author(s): Zhihong Weng, Qiaosen Chen, Sumeng Li, Huadong Li, Qian Zhang, Sihong Lu, Ling Wu, Leiqun Xiong, Bobin Mi, Di Liu, Mengji Lu, Dongliang Yang, Hongbo Jiang, Shuang Zheng, Xin Zheng
Software Mentions: 7
Published: about 6 years ago
10.3389/fonc.2020.608334
Nomogram for Predicting Lymph Node Involvement in Triple-Negative Breast CancerCited by: 18
Author(s): Xiang Cui, Hongxia Zhu, Jiefu Huang
Software Mentions: 7
Published: almost 6 years ago
10.1186/s12935-021-02086-5
PODN is a prognostic biomarker and correlated with immune infiltrates in osteosarcomaCited by: 9
Author(s): Feng Yao, Zhenxin Zhu, Jun Wen, Fu Yong Zhang, Zheng Zhang, Lei Zhu, Guang Hao Su, Quan Yuan, Yun Fang Zhen, Xiao Dong Wang
Software Mentions: 7
Published: about 5 years ago
10.1101/2021.03.07.21252875
Age-dependent impact of the major common genetic risk factor for COVID-19 on severity and mortalityCited by: 21
Author(s): Teruyuki Nakanishi, Sara Pigazzini, Frauke Degenhardt, Mattia Cordioli, Guillaume Butler‐Laporte, Douglas Maya-Miles, Beatriz Nafr_a-Jim_nez, Youssef Bouysran, Mari Niemi, Adriana Palom, David Ellinghaus, Atlas Khan, Manuel Mart_nez-Bueno, Selina Rolker, Sara Amitano, Luisa Roade, FinnGen, Francesca Fava, Christoph D. Spinner, Daniele Prati, David Bernardo, Féderico García, Gilles Darcis, Israel Fern_ndez-Cadenas, Jan Cato Holter, Jesús M. Bañales, Robert Frithiof, Krzysztof Kiryluk, Stefano Duga, Rosanna Asselta, Alexandre C. Pereira, Manuel Romero-G_mez, Luís Bujanda, Johannes R. Hov, Isabelle Migeotte, Alessandra Renieri, Anna M. Planas, Kerstin U. Ludwig, María Buti, Souad Rahmouni, Marta E. Alarc_n-Riquelme, Eva C. Schulte, André Franke, Tom H. Karlsen, Luca Valenti, Hugo Zeberg, J. Brent Richards, Andrea Ganna
Software Mentions: 7
Published: over 5 years ago
10.1186/s12967-016-0906-9
Centrosome associated genes pattern for risk sub-stratification in multiple myelomaCited by: 13
Author(s): Fedor Kryukov, Pavel Němec, Lenka Radová, Elena V. Kryukova, Samuel Adeyinka Okubote, Jiří Minařík, Zdena Štefániková, Luděk Pour, Roman Hájek
Software Mentions: 7
Published: over 10 years ago
10.1186/s40462-020-0194-0
Effects of age on foraging behavior in two closely related albatross speciesCited by: 18
Author(s): Caitlin K. Frankish, Andrea Manica, Richard A. Phillips
Software Mentions: 7
Published: over 6 years ago
10.1155/2019/4572130
Intraoperative Hepatic Blood Inflow Can Predict Early Acute Kidney Injury following DCD Liver Transplantation: A Retrospective Observational StudyCited by: 2
Author(s): Ao Jiao, Qingpeng Liu, Feng Li, Rui Guo, Bowen Wang, Xiwen Lu, Ning Sun, Chengshuo Zhang, Xiaohang Li, Jialin Zhang
Software Mentions: 7
Published: about 7 years ago
10.1515/tnsci-2021-0002
<i>IKBIP</i> is a novel EMT-related biomarker and predicts poor survival in gliomaCited by: 9
Author(s): Ying Yang, Jin Wang, Shi‐Hai Xu, Wen Lv, Fei Shi, Aijun Shan
Software Mentions: 7
Published: almost 6 years ago
10.1186/s12864-017-4304-3
Transcriptome profiling of aging Drosophila photoreceptors reveals gene expression trends that correlate with visual senescenceCited by: 71
Author(s): Hana Hall, Patrick S Medina, Daphne A. Cooper, Spencer E. Escobedo, Jeremiah Rounds, Kaelan J. Brennan, Christopher Vincent, Pedro Miura, R. W. Doerge, Vikki M. Weake
Software Mentions: 7
Published: almost 9 years ago
10.20892/j.issn.2095-3941.2020.0402
The m6A methylation landscape stratifies hepatocellular carcinoma into 3 subtypes with distinct metabolic characteristicsCited by: 17
Author(s): Xiaotian Shen, Beiyuan Hu, Jing Xu, Wei Qin, Yan Fu, Shun Wang, Qiongzhu Dong, Lun–Xiu Qin
Software Mentions: 7
Published: almost 7 years ago
10.1111/cns.13382
RGS16 promotes glioma progression and serves as a prognostic factorCited by: 20
Author(s): Ruoyu Huang, Guanzhang Li, Zheng Zhao, Fan Zeng, Kenan Zhang, Yanwei Liu, Kuanyu Wang, Huimin Hu
Software Mentions: 7
Published: over 6 years ago
10.1038/s41598-021-93286-6
Development and validation of an institutional nomogram for aiding aneurysm rupture risk stratificationCited by: 3
Author(s): Qinglin Liu, Peng Jiang, Yuhua Jiang, Huijian Ge, Shaolin Li, Hengwei Jin, Peng Liu, YouXiang Li
Software Mentions: 7
Published: over 5 years ago
10.3390/s19071588
Reducing False Arrhythmia Alarms Using Different Methods of Probability and Class Assignment in Random Forest Learning MethodsCited by: 9
Author(s): Krzysztof Gajowniczek, Iga Grzegorczyk, Tomasz Ząbkowski
Software Mentions: 7
Published: over 7 years ago
10.1002/1878-0261.12348
Integrating biomarkers across omic platforms: an approach to improve stratification of patients with indolent and aggressive prostate cancerCited by: 38
Author(s): Keefe Murphy, Brendan Murphy, Susie Boyce, Louise Flynn, Sarah Gilgunn, Colm J. O’Rourke, Cathy Rooney, Henning Stöckmann, Anna Walsh, Stephen P. Finn, Richard O’Kennedy, John O’Leary, Stephen R. Pennington, Antoinette S. Perry, Pauline M. Rudd, Radka Saldova, Orla Sheils, Denis C. Shields, R. William G. Watson
Software Mentions: 7
Published: about 8 years ago
10.1371/journal.pone.0219302
Artificial intelligence algorithm for predicting mortality of patients with acute heart failureCited by: 74
Author(s): Joon Kwon, Kyung Hee Kim, Ki‐Hyun Jeon, Sang Eun Lee, Hae Young Lee, Hyun Jai Cho, Jin Oh Choi, Eun Seok Jeon, Min Seok Kim, Jae Joong Kim, Kyung Kuk Hwang, Shung Chull Chae, Sang Hong Baek, Seok Min Kang, Dong Ju Choi, Byung Su Yoo, Kye Hun Kim, Hyun-Young Park, Myeong Chan Cho, Byung Hee Oh
Software Mentions: 7
Published: over 7 years ago
10.1155/2021/8323487
LncRNA ELF3-AS1 is a Prognostic Biomarker and Correlated with Immune Infiltrates in Hepatocellular CarcinomaCited by: 14
Author(s): Tianming Chen, Changhao Zhu, Xing Wang, Yaozhen Pan
Software Mentions: 7
Published: over 5 years ago
10.3389/fmolb.2021.659168
Transcriptomic Profiling Identifies DCBLD2 as a Diagnostic and Prognostic Biomarker in Pancreatic Ductal AdenocarcinomaCited by: 9
Author(s): Zengyu Feng, Kexian Li, Yulian Wu, Chenghong Peng
Software Mentions: 7
Published: over 5 years ago
10.1186/s12967-017-1195-7
Her2 assessment using quantitative reverse transcriptase polymerase chain reaction reliably identifies Her2 overexpression without amplification in breast cancer casesCited by: 13
Author(s): Gabriele Zoppoli, Anna Garuti, Gabriella Cirmena, Ludovica Verdun di Cantogno, C. Botta, M. Gallo, Domenico Ferraioli, Enrico Carminati, Paola Baccini, Monica Curto, Piero Fregatti, Edoardo Isnaldi, Michela Lia, Roberto Murialdo, Daniele Friedman, Anna Sapino, Alberto Ballestrero
Software Mentions: 7
Published: over 9 years ago
10.1186/s10194-018-0863-1
The role of personality, disability and physical activity in the development of medication-overuse headache: a prospective observational studyCited by: 15
Author(s): Louise Schlosser Mose, Susanne S. Pedersen, Birgit Debrabant, Rigmor Jensen, Bibi Gram
Software Mentions: 7
Published: over 8 years ago
10.1136/jitc-2021-002467
Tumor microenvironment evaluation promotes precise checkpoint immunotherapy of advanced gastric cancerCited by: 75
Author(s): Dongqiang Zeng, Jiani Wu, Hongyu Luo, Yong Li, Jian Xiao, Jianjun Peng, Zilan Ye, Rui Zhou, Yunfang Yu, Gaofeng Wang, Na Huang, Jianhua Wu, Xiaoxiang Rong, Li Sun, Huiying Sun, Wenjun Qiu, Yuting Xue, Jianping Bin, Yulin Liao, Li N, Min Shi, Kyoung‐Mee Kim, Wangjun Liao
Software Mentions: 7
Published: about 5 years ago
10.3390/ijms21124236
Differential Urinary Proteome Analysis for Predicting Prognosis in Type 2 Diabetes Patients with and without Renal DysfunctionCited by: 25
Author(s): Hee‐Sung Ahn, Jong Ho Kim, Hee Jong Jeong, Jeesuk Yu, Jeonghun Yeom, Sang Heon Song, Sang Soo Kim, In Joo Kim, Kyunggon Kim
Software Mentions: 7
Published: over 6 years ago
10.3390/ijns6010016
Reducing False-Positive Results in Newborn Screening Using Machine LearningCited by: 27
Author(s): Gang Peng, Yishuo Tang, Tina M. Cowan, Gregory M. Enns, Hongyu Zhao, Curt Scharfe
Software Mentions: 7
Published: over 6 years ago
10.18632/oncotarget.16907
A risk prediction model for post-stroke depression in Chinese stroke survivors based on clinical and socio-psychological featuresCited by: 14
Author(s): Rui Li, Yingying Yue, Hanyang Jiang, Jian Lü, Aiqin Wu, Deqin Geng, Jun Wang, Jianxin Lü, Sheng‐Hua Li, Hua Tang, Xuesong Lu, Kezhong Zhang, Tian Liu, Yuan Yuan, Qiao Wang
Software Mentions: 7
Published: over 9 years ago
10.3390/ijms21124367
Machine-Learned Association of Next-Generation Sequencing-Derived Variants in Thermosensitive Ion Channels Genes with Human Thermal Pain Sensitivity PhenotypesCited by: 2
Author(s): Jörn Lötsch, Dario Kringel, Gerd Geißlinger, B. Oertel, Eduard Resch, Sebastian Malkusch
Software Mentions: 6
Published: over 6 years ago
10.3390/ijms20092075
Deep Learning/Artificial Intelligence and Blood-Based DNA Epigenomic Prediction of Cerebral PalsyCited by: 31
Author(s): Ray O. Bahado‐Singh, Sangeetha Vishweswaraiah, Buket Aydas, Nitish K. Mishra, Chittibabu Guda, Uppala Radhakrishna
Software Mentions: 6
Published: over 7 years ago
10.1186/s13033-019-0278-7
Development and evaluation of Intensive Case Management Screening Sheet in the Japanese populationCited by: 4
Author(s): Kota Suzuki, Sosei Yamaguchi, Yasunari Kawasoe, Kazumi Nayuki, Tsutomu Aoki, Hasegawa Naomi, Chiyo Fujii
Software Mentions: 6
Published: over 7 years ago
10.1007/s00415-020-09859-4
Posterior circulation stroke: machine learning-based detection of early ischemic changes in acute non-contrast CT scansCited by: 12
Author(s): Helge Kniep, Peter Sporns, Gabriel Broocks, André Kemmling, Jawed Nawabi, Thilo Rusche, Jens Fiehler, Uta Hanning
Software Mentions: 6
Published: over 6 years ago
10.1155/2018/5463762
Adiponectin and Leptin at Early Pregnancy: Association to Actual Glucose Disposal and Risk for GDM—A Prospective Cohort StudyCited by: 25
Author(s): Latife Bozkurt, Christian Göbl, Sabina Baumgartner‐Parzer, Anton Luger, Giovanni Pacini, Alexandra Kautzky–Willer
Software Mentions: 6
Published: about 8 years ago
10.3390/ijms22031189
Comparison of Proteomic Technologies for Blood-Based Detection of Colorectal CancerCited by: 7
Author(s): Megha Bhardwaj, Tobias Terzer, Petra Schrotz‐King, Hermann Brenner
Software Mentions: 6
Published: over 5 years ago
10.3390/ijms21218160
Proteomic Profiling of Archived Tissue of Primary Melanoma Identifies Proteins Associated with MetastasisCited by: 3
Author(s): Andrew Shapanis, Chester Lai, Mathew Sommerlad, Erika Parkinson, Eugene Healy, Paul Skipp
Software Mentions: 6
Published: almost 6 years ago
10.3389/fmicb.2021.643025
Specific Microbial Taxa and Functional Capacity Contribute to Chicken Abdominal Fat DepositionCited by: 18
Author(s): Hai Xiang, Jiankang Gan, Daoshu Zeng, Jing Li, Hui Yu, Huabin Zhao, Ying Yang, Shuo Tan, Gen Li, Chaowei Luo, Zhen Xie, Guiping Zhao, Hua Li
Software Mentions: 6
Published: over 5 years ago
10.1038/s41598-020-70703-w
Peripheral serum metabolomic profiles inform central cognitive impairmentCited by: 21
Author(s): Jingye Wang, Runmin Wei, Guoxiang Xie, Matthias Arnold, Alexandra Kueider‐Paisley, Gregory Louie, Siamak Mahmoudian Dehkordi, Colette Blach, Rebecca Baillie, Xianlin Han, Philip L. De Jager, David A. Bennett, Rima Kaddurah‐Daouk, Jia Wang
Software Mentions: 6
Published: about 6 years ago
10.1186/s12873-020-00396-x
The utility of the rapid emergency medicine score (REMS) compared with SIRS, qSOFA and NEWS for Predicting in-hospital Mortality among Patients with suspicion of Sepsis in an emergency departmentCited by: 23
Author(s): Onlak Ruangsomboon, Phetsinee Boonmee, Chok Limsuwat, Tipa Chakorn, Apichaya Monsomboon
Software Mentions: 6
Published: almost 6 years ago
10.1371/journal.pone.0206862
Optimal intensive care outcome prediction over time using machine learningCited by: 64
Author(s): Christopher Meiring, Abhishek Dixit, Steve Harris, Niall MacCallum, David Brealey, Peter Watkinson, Andrew Jones, Simon Ashworth, Richard Beale, Stephen Brett, Mervyn Singer, Ari Ercole
Software Mentions: 6
Published: almost 8 years ago
10.3389/fmicb.2021.673969
Characterization of the Genitourinary Microbiome of 1,165 Middle-Aged and Elderly Healthy IndividualsCited by: 2
Author(s): Junjie Qin, Shi Xiao-li, Junming Xu, Simin Yuan, Bo Zheng, Enpu Zhang, Guangtao Huang, Li Guo, Ganggang Jiang, Shan Gao, Tian Cheng, Ruochun Guo, Zhicong Fu, Qingru Huang, Rentao Yang, Wenyong Zhang, Shenghui Li, Song Wu
Software Mentions: 6
Published: about 5 years ago
10.1038/s41598-019-56235-y
FABP4 and MMP9 levels identified as predictive factors for poor prognosis in patients with nonalcoholic fatty liver using data mining approaches and gene expression analysisCited by: 32
Author(s): Audrey Coilly, Christophe Desterke, Catherine Guettier, Didier Samuel, Franck Chiappini
Software Mentions: 6
Published: almost 7 years ago
10.1371/journal.pone.0210467
Literature optimized integration of gene expression for organ-specific evaluation of toxicogenomics datasetsCited by: 0
Author(s): Katerina Taškova, Jean-Fred Fontaine, Ralf Mrowka, Miguel A. Andrade‐Navarro
Software Mentions: 6
Published: over 7 years ago
10.1186/s12885-021-08520-1
Computational analysis for identification of early diagnostic biomarkers and prognostic biomarkers of liver cancer based on GEO and TCGA databases and studies on pathways and biological functions affecting the survival time of liver cancerCited by: 21
Author(s): Shuangquan Gao, Jian Gang, Man Yu, Guiliang Xin, Huixin Tan
Software Mentions: 6
Published: over 5 years ago
10.3390/cancers13102447
MRI-Based Radiomics Analysis for the Pretreatment Prediction of Pathologic Complete Tumor Response to Neoadjuvant Systemic Therapy in Breast Cancer Patients: A Multicenter StudyCited by: 16
Author(s): R. Granzier, Abdalla Ibrahim, Sergey Primakov, Sanaz Samiei, Thiemo J A van Nijnatten, Maaike de Boer, E. M. Heuts, F J Hulsmans, A. Chatterjee, Philippe Lambin, Marc Lobbes, Henry C. Woodruff, Marjolein L. Smidt
Software Mentions: 6
Published: over 5 years ago
10.3389/fmicb.2019.02120
Incorporating Statistical Test and Machine Intelligence Into Strain Typing of Staphylococcus haemolyticus Based on Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass SpectrometryCited by: 18
Author(s): Chia-Ru Chung, Hsin-Yao Wang, Frank Lien, Yi-Ju Tseng, Chun‐Hsien Chen, Tzong-Yi Lee, Tsui Ping Liu, Jorng-Tzong Horng, Jang Jih Lu
Software Mentions: 6
Published: about 7 years ago
10.1371/journal.pone.0197074
Multi-site evaluation of the LN34 pan-lyssavirus real-time RT-PCR assay for post-mortem rabies diagnosticsCited by: 43
Author(s): Crystal M. Gigante, Lisa Dettinger, James Powell, Melanie Seiders, Rene Edgar Condori, Richard Griesser, Kenneth Okogi, Maria P. Carlos, Kendra N. Pesko, Mike Breckenridge, Edson Michael M. Simon, Maria Yna Joyce Chu, April Davis, Scott Brunt, Lillian A. Orciari, Pamela A. Yager, William C. Carson, Claire Hartloge, Jeremiah T. Saliki, Susan Sánchez, Mojgan Deldari, Kristina Hsieh, Ashutosh Wadhwa, Kimberly Wilkins, Veronica Yung Peredo, Patricia Rabideau, Nina Gruhn, Rolain Cadet, Shrikrishna Isloor, Sujith S Nath, Tomy Joseph, Jinxin Gao, Ryan M. Wallace, Mary G. Reynolds, Victoria A. Olson, Li Yu
Software Mentions: 6
Published: over 8 years ago
10.1371/journal.pone.0207002
Re-purposing 16S rRNA gene sequence data from within case paired tumor biopsy and tumor-adjacent biopsy or fecal samples to identify microbial markers for colorectal cancerCited by: 24
Author(s): Mansi Shah, Todd Z. DeSantis, José‐Miguel Yamal, Tiffany L. Weir, Elizabeth P. Ryan, Julia Cope, Emily B. Hollister
Software Mentions: 6
Published: almost 8 years ago
10.3390/cancers13133116
Plasma Proteomic Analysis in Non-Small Cell Lung Cancer Patients Treated with PD-1/PD-L1 BlockadeCited by: 14
Author(s): Mohamed Eltahir, Johan Isaksson, Johanna Sofia Margareta Mattsson, Klas Kärre, Johan Botling, Martin Lord, Sara M. Mangsbo, Patrick Micke
Software Mentions: 6
Published: over 5 years ago
10.1371/journal.pone.0207192
Mortality prediction in patients with isolated moderate and severe traumatic brain injury using machine learning modelsCited by: 66
Author(s): Cheng-Shyuan Rau, Pao‐Jen Kuo, Peng‐Chen Chien, Chun-Ying Huang, Hsiao-Yun Hsieh, Ching‐Hua Hsieh
Software Mentions: 6
Published: almost 8 years ago
10.18632/aging.103923
Two machine learning methods identify a metastasis-related prognostic model that predicts overall survival in medulloblastoma patientsCited by: 3
Author(s): Kui Chen, Bingqing Huang, Shan Yan, Siyi Xu, Keqin Li, Kuiming Zhang, Qi Wang, Zhongwei Zhuang, Liang Wei, Yanfei Zhang, Min Liu, Hao Lian, Chunlong Zhong
Software Mentions: 6
Published: almost 6 years ago
10.1371/journal.pone.0118573
Transcriptomics of Maternal and Fetal Membranes Can Discriminate between Gestational-Age Matched Preterm Neonates with and without Cognitive Impairment Diagnosed at 18–24 MonthsCited by: 16
Author(s): Athina Pappas, Tinnakorn Chaiworapongsa, Roberto Romero, Steven J. Korzeniewski, Josef C. Cortez, Gaurav Bhatti, Nardhy Gomez-López, Sonia S. Hassan, Seetha Shankaran, Adi L. Tarca
Software Mentions: 6
Published: over 11 years ago
10.1038/s41598-021-81506-y
Deep learning predicts postsurgical recurrence of hepatocellular carcinoma from digital histopathologic imagesCited by: 25
Author(s): Rikiya Yamashita, Long Jin, Atif Saleem, Daniel L. Rubin, Jeanne Shen
Software Mentions: 6
Published: over 5 years ago
10.1155/2020/8182358
Two Gene Set Variation Index as Biomarker of Bacterial and Fungal SepsisCited by: 4
Author(s): Xiaowen Zheng, Yifeng Luo, Qian Li, Jihua Feng, Chunling Zhao, Junyu Lu, Jiefeng Luo, Jianfeng Zhang
Software Mentions: 6
Published: over 6 years ago
10.1186/s12885-021-08052-8
Comprehensive analysis of immune-related prognostic genes in the tumour microenvironment of hepatocellular carcinomaCited by: 2
Author(s): Weike Gao, Luan Li, Xinyin Han, Siyao Liu, Chengzhen Li, Guanying Yu, Lei Zhang, Dongsheng Zhang, Caiyun Liu, Erhong Meng, Shuai Hong, Dongliang Wang, Peiming Guo, Guangjun Shi
Software Mentions: 6
Published: over 5 years ago
10.1155/2018/3243754
To Predict the Requirement of Pharmacotherapy by OGTT Glucose Levels in Women with GDM Classified by the IADPSG CriteriaCited by: 4
Author(s): Gülen Yerlikaya, Veronica Falcone, Tina Stopp, Martina Mittlböck, Andrea Tura, Peter Husslein, Wolfgang Eppel
Software Mentions: 6
Published: almost 9 years ago
10.1186/s40168-019-0766-7
Discordant transmission of bacteria and viruses from mothers to babies at birthCited by: 61
Author(s): Rabia Maqsood, Rachel Rodgers, Cynthia Rodríguez, Scott A. Handley, I. Malick Ndao, Phillip I. Tarr, Barbara Warner, Efrem S. Lim, Lori R. Holtz
Software Mentions: 6
Published: almost 7 years ago
10.1371/journal.pone.0116095
ICan: An Integrated Co-Alteration Network to Identify Ovarian Cancer-Related GenesCited by: 9
Author(s): Yuanshuai Zhou, Yongjing Liu, Kening Li, Rui Zhang, Fujun Qiu, Ning Zhao, Yan Xu
Software Mentions: 6
Published: over 11 years ago
10.1016/j.redox.2020.101764
Prediction of survival odds in COVID-19 by zinc, age and selenoprotein P as composite biomarkerCited by: 130
Author(s): Raban Arved Heller, Qian Sun, Julian Hackler, Julian Seelig, Linda Seibert, Asan Cherkezov, Waldemar B. Minich, Petra Seemann, Joachim Diegmann, Maximilian Pilz, Manuel Bachmann, Alireza Ranjbar, Arash Moghaddam, Lutz Schomburg
Software Mentions: 6
Published: almost 6 years ago
10.1371/journal.pone.0232534
A model for the assessment of bluetongue virus serotype 1 persistence in SpainCited by: 8
Author(s): Cecilia Aguilar-Vega, Eduardo Fernández-Carrión, Javier Lucientes, José Manuel Sánchez‐Vizcaíno
Software Mentions: 6
Published: over 6 years ago
10.1186/s13326-020-00228-8
Identifying disease trajectories with predicate information from a knowledge graphCited by: 4
Author(s): Wytze J. Vlietstra, Rein Vos, Marjan van den Akker, Erik M. van Mulligen, Jan A. Kors
Software Mentions: 6
Published: about 6 years ago
10.1186/1471-2105-12-77
pROC: an open-source package for R and S+ to analyze and compare ROC curvesCited by: 7,791
Author(s): Xavier Robin, Natacha Turck, Alexandre Hainard, Natalia Tiberti, Frédérique Lisacek, Jean-Charles Sanchez, Markus Müller
Software Mentions: 6
Published: over 15 years ago
10.1002/acm2.13107
Clinical and radiological predictors of epidermal growth factor receptor mutation in nonsmall cell lung cancerCited by: 12
Author(s): Yutao Dang, Ruotian Wang, Kun Qian, Jie Lu, Haixiang Zhang, Yi Zhang
Software Mentions: 6
Published: almost 6 years ago
10.1016/j.jaut.2019.06.009
Predicting drug-free remission in rheumatoid arthritis: A prospective interventional cohort studyCited by: 28
Author(s): Kenneth F. Baker, Andrew Skelton, Dennis Lendrem, Adam Scadeng, Ben Thompson, Arthur G. Pratt, John D. Isaacs
Software Mentions: 6
Published: almost 7 years ago
10.3389/fgene.2019.01111
Translated Long Non-Coding Ribonucleic Acid ZFAS1 Promotes Cancer Cell Migration by Elevating Reactive Oxygen Species Production in Hepatocellular CarcinomaCited by: 17
Author(s): Zhi-Wei Guo, Yijun Meng, Xiang-Ming Zhai, Chen Xie, Na Zhao, Min Li, Chen Zhou, Kun Li, Tiancai Liu, Xu Yang, Yangyang Wu
Software Mentions: 6
Published: almost 7 years ago
10.1001/jamanetworkopen.2021.7737
Predictors of 30-Day Mortality Among Dutch Patients Undergoing Colorectal Cancer Surgery, 2011-2016Cited by: 31
Author(s): Tom van den Bosch, A. K. Warps, Michael P.M. de Neree tot Babberich, C Stamm, Bart F. Geerts, Louis Vermeulen, Michel W.J.M. Wouters, Jan Willem T. Dekker, Rob A.E.M. Tollenaar, Pieter J. Tanis, Daniël M. Miedema, Dutch ColoRectal Audit
Software Mentions: 6
Published: over 5 years ago
10.3389/fgene.2020.565206
Identification and Validation of Two Lung Adenocarcinoma-Development Characteristic Gene Sets for Diagnosing Lung Adenocarcinoma and Predicting PrognosisCited by: 10
Author(s): Cheng Liu, Xiang Li, Huili Shao, Dan Li
Software Mentions: 6
Published: almost 6 years ago
10.3389/fchem.2021.659656
iMAP: A Web Server for Metabolomics Data Integrative AnalysisCited by: 4
Author(s): Di Zhou, Wen-Hong Zhu, Tao Sun, Yang Wang, Yi Chi, Tianlu Chen, Jingchao Lin
Software Mentions: 6
Published: over 5 years ago
10.3389/fmicb.2017.02222
Gut Microbial Dysbiosis Is Associated with Altered Hepatic Functions and Serum Metabolites in Chronic Hepatitis B PatientsCited by: 126
Author(s): Jing Wang, Yang Wang, Xu Zhang, Jiaqi Liu, Qianpeng Zhang, Yu Zhao, Jinghua Peng, Qin Feng, Jianye Dai, Shujun Sun, Yuwu Zhao, Liping Zhao, Yongyu Zhang, Yiyang Hu, Menghui Zhang
Software Mentions: 6
Published: almost 9 years ago
10.1186/s12891-021-04400-8
Predicting the duration of sickness absence due to knee osteoarthritis: a prognostic model developed in a population-based cohort in SwedenCited by: 2
Author(s): Johanna Holm, Paolo Frumento, Gino Almondo, Katalin Gémes, Matteo Bottai, Kristina Alexanderson, Emilie Friberg, Kristin Farrants
Software Mentions: 6
Published: over 5 years ago
10.1161/JAHA.119.013152
Cardiac Myosin‐Binding Protein C to Diagnose Acute Myocardial Infarction in the Pre‐Hospital SettingCited by: 11
Author(s): Thomas E Kaier, Carsten Stengaard, Jack Marjot, Jacob Thorsted Sørensen, Bashir Alaour, Stavroula Stavropoulou-Tatla, Christian Juhl Terkelsen, Lindsey W. Williams, Kristian Thygesen, Ekkehard Weber, Michael Marber, Hans Erik Bøtker
Software Mentions: 6
Published: about 7 years ago
10.1038/s41598-021-86735-9
Machine learning is the key to diagnose COVID-19: a proof-of-concept studyCited by: 17
Author(s): Cédric Gangloff, Sonia Rafi, Guillaume Bouzillé, Louis Soulat, Marc Cuggia
Software Mentions: 6
Published: over 5 years ago
10.3389/fcvm.2020.580573
Comprehensive Identification of Key Genes Involved in Development of Diabetes Mellitus-Related Atherogenesis Using Weighted Gene Correlation Network AnalysisCited by: 14
Author(s): Qi Huang, Guo-Xiong Deng, Rongguo Wei, Qiaoye Wang, Donghua Zou, Jinru Wei
Software Mentions: 6
Published: almost 6 years ago
10.3390/healthcare9030317
Automatic Evaluation of Heart Condition According to the Sounds Emitted and Implementing Six Classification MethodsCited by: 5
Author(s): Manuel A. Soto-Murillo, Jorge I. Galván-Tejada, Carlos E. Galván-Tejada, José M. Celaya-Padilla, Huizilopoztli Luna-García, Rafael Magallanes‐Quintanar, Tania A. Gutiérrez-García, Hamurabi Gamboa-Rosales
Software Mentions: 6
Published: over 5 years ago
10.1002/cam4.3251
Uridine phosphorylase 1 is a novel immune‐related target and predicts worse survival in brain gliomaCited by: 16
Author(s): Jin Wang, Shi‐Hai Xu, Wen Lv, Fei Shi, Shanshan Mei, Aijun Shan, Jiake Xu, Ying Yang
Software Mentions: 6
Published: over 6 years ago
10.1371/journal.pone.0235328
Aptamer based proteomic pilot study reveals a urine signature indicative of pediatric urinary tract infectionsCited by: 10
Author(s): Liang Dong, Joshua R. Watson, Sha Cao, Samuel Arregui, Vijay Saxena, John Ketz, Abduselam K. Awol, Daniel M. Cohen, Jeffrey M. Caterino, David S. Hains, Andrew L. Schwaderer
Software Mentions: 6
Published: over 6 years ago
10.3389/fnagi.2021.602781
Exploring the Key Genes and Identification of Potential Diagnosis Biomarkers in Alzheimer’s Disease Using Bioinformatics AnalysisCited by: 20
Author(s): Wuhan Yu, Weihua Yu, Yan Yang, Yang Lü
Software Mentions: 6
Published: over 5 years ago
10.1002/hbm.24554
Detection of mild cognitive impairment in a community‐dwelling population using quantitative, multiparametric MRI‐based classificationCited by: 6
Author(s): Mark J. R. J. Bouts, Jeroen van der Grond, Meike W. Vernooij, Marisa Koini, Tijn M. Schouten, Frank de Vos, Rogier A. Feis, Lotte G.M. Cremers, Anita Lechner, Reinhold Schmidt, Mark de Rooij, Wiro J. Niessen, M. Arfan Ikram, Serge A.R.B. Rombouts
Software Mentions: 6
Published: over 7 years ago
10.1002/cam4.3133
Charactering tumor microenvironment reveals stromal‐related transcription factors promote tumor carcinogenesis in gastric cancerCited by: 14
Author(s): Haining Liu, Shujuan Ni, Hanbo Wang, Qiongyan Zhang, Wei-Hung Weng
Software Mentions: 6
Published: over 6 years ago
10.3390/genes12091339
Integrated Bioinformatics Analysis Reveals Marker Genes and Potential Therapeutic Targets for Pulmonary Arterial HypertensionCited by: 8
Author(s): Aoqi Li, Jin He, Zhe Zhang, Shuhui Jiang, Yun Gao, Yuchun Pan, Huanan Wang, Lenan Zhuang
Software Mentions: 6
Published: about 5 years ago