cran: ks | Projects | Ecosyste.ms: Papers

10.3389/fmicb.2019.02904

Fungal Traits Important for Soil Aggregation
Cited by: 68
Author(s): Anika Lehmann, Weiguo Zheng, Masahiro Ryo, Katharina Soutschek, Julien Roy, Rebecca Rongstock, Stefanie Maaß, Matthias C. Rillig
Software Mentions: 11
Published: almost 5 years ago

10.7554/eLife.11613

Epigenomic landscapes of retinal rods and cones
Cited by: 107
Author(s): Alisa Mo, Chongyuan Luo, Fred P. Davis, Eran A. Mukamel, Gilbert L. Henry, Joseph R. Nery, Mark A. Urich, Serge Picard, Ryan Lister, Sean R. Eddy, M Beer, Joseph R. Ecker, Jeremy Nathans
Software Mentions: 11
Published: over 8 years ago

10.1186/s13071-018-3066-3

Modelling the spatial distribution of aquatic insects (Order Hemiptera) potentially involved in the transmission of Mycobacterium ulcerans in Africa
Cited by: 9
Author(s): Jorge Cano, Antonio Rodrı́guez Rodrı́guez, Hamish Simpson, Earnest Njih Tabah, José Luís Graña Gómez, Rachel L. Pullan
Software Mentions: 10
Published: about 6 years ago

10.1371/journal.pone.0179570

Multi-level, multi-scale resource selection functions and resistance surfaces for conservation planning: Pumas as a case study
Cited by: 77
Author(s): Katherine A. Zeller, T. Winston Vickers, Holly B. Ernest, Walter M. Boyce
Software Mentions: 9
Published: over 7 years ago

10.1038/s41598-018-35306-6

Individual variability in diving, movement and activity patterns of adult bearded seals in Svalbard, Norway
Cited by: 21
Author(s): Charmain D. Hamilton, Kit M. Kovacs, Christian Lydersen
Software Mentions: 9
Published: about 6 years ago

10.1038/s41598-019-50565-7

Tradeoffs in hyphal traits determine mycelium architecture in saprobic fungi
Cited by: 14
Author(s): Anika Lehmann, Weiguo Zheng, Katharina Soutschek, Julien Roy, Andrey Yurkov, Matthias C. Rillig
Software Mentions: 9
Published: about 5 years ago

10.1371/journal.pone.0150547

Permissible Home Range Estimation (PHRE) in Restricted Habitats: A New Algorithm and an Evaluation for Sea Otters
Cited by: 36
Author(s): L. Max Tarjan, M. Tim Tinker
Software Mentions: 9
Published: over 8 years ago

10.1186/1471-2105-16-S13-S7

Enhancing cancer clonality analysis with integrative genomics
Cited by: 6
Author(s): Erich A. Peterson, Michael Bauer, Shweta S. Chavan, Cody Ashby, Niels Weinhold, Christoph Heuck, Gareth J. Morgan, Donald J. Johann
Software Mentions: 7
Published: almost 9 years ago

10.1186/s40462-015-0049-2

Summing the strokes: energy economy in northern elephant seals during large-scale foraging migrations
Cited by: 33
Author(s): JL Maresh, Taiki Adachi, Akinori Takahashi, Yoshiro Naito, DE Crocker, Markus Horning, T. M. Williams, Daniel P. Costa
Software Mentions: 7
Published: about 9 years ago

10.3390/e23010107

Distance-Based Estimation Methods for Models for Discrete and Mixed-Scale Data
Cited by: 1
Author(s): Elisavet M. Sofikitou, Ray Liu, Huipei Wang, Marianthi Markatou
Software Mentions: 6
Published: almost 4 years ago

10.1186/s12862-021-01877-8

How do lizard niches conserve, diverge or converge? Further exploration of saurian evolutionary ecology
Cited by: 5
Author(s): Nicolás Pelegrín, Kirk O. Winemiller, Laurie J. Vitt, Daniel B. Fitzgerald, Eric R. Pianka
Software Mentions: 6
Published: over 3 years ago

10.1136/bmjgh-2018-000730

Predicted distribution and burden of podoconiosis in Cameroon
Cited by: 19
Author(s): Kebede Deribe, Jorge Cano, Abdel Jélil Njouendou, Mathias Esum Eyong, Amuam Andrew Beng, Emanuele Giorgi, David M. Pigott, Rachel L. Pullan, Abdisalan M. Noor, Fikre Enquselassie, Christopher J L Murray, Simon I. Hay, Melanie J. Newport, Gail Davey, Samuel Wanji
Software Mentions: 5
Published: over 6 years ago

10.1093/molbev/msx270

Faster Evolving Primate Genes Are More Likely to Duplicate
Cited by: 35
Author(s): Áine O’Toole, Laurence D. Hurst, Aoife McLysaght
Software Mentions: 5
Published: about 7 years ago

10.3389/fpsyg.2019.02187

Visual Exploration of Dynamic or Static Joint Attention Bids in Children With Autism Syndrome Disorder
Cited by: 10
Author(s): Federica Cilia, Alexandre Aubry, Barbara Le Driant, Béatrice Bourdin, Luc Vandromme
Software Mentions: 5
Published: about 5 years ago

10.1186/s12917-018-1515-z

Cattle transhumance and agropastoral nomadic herding practices in Central Cameroon
Cited by: 29
Author(s): Paolo Carlo Motta, Thibaud Porphyre, Saidou M. Hamman, K. L. Morgan, Victor Ngu Ngwa, Vincent N. Tanya, Eran A. Raizman, Ian Handel, Barend Mark de Clare Bronsvoort
Software Mentions: 5
Published: over 6 years ago

10.1186/s40462-015-0039-4

Is there a single best estimator? Selection of home range estimators using area-under-the-curve
Cited by: 68
Author(s): W. David Walter, Dave Onorato, Justin W. Fischer
Software Mentions: 5
Published: over 9 years ago

10.1371/journal.pone.0154871

Fruiting Season Length Restricts Global Distribution of Female-Only Parental Care in Frugivorous Passerine Birds
Cited by: 8
Author(s): Sahas Barve, Frank A. La Sorte
Software Mentions: 5
Published: over 8 years ago

10.1002/ece3.3216

Influence of density‐dependent competition on foraging and migratory behavior of a subtropical colonial seabird
Cited by: 36
Author(s): Juliet S. Lamb, Yvan G. Satgé, Patrick G. R. Jodice
Software Mentions: 5
Published: over 7 years ago

10.1038/s41598-019-46330-5

Geometric morphometrics for the study of facial expressions in non-human animals, using the domestic cat as an exemplar
Cited by: 34
Author(s): Lauren Finka, Stélio Pacca Loureiro Luna, Juliana Tabarelli Brondani, Yorgos Tzimiropoulos, John McDonagh, Mark J. Farnworth, Marcello Ruta, Daniel S. Mills
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pgen.1008385

Distinct genetic variation and heterogeneity of the Iranian population
Cited by: 30
Author(s): Zohreh Mehrjoo, Zohreh Fattahi, Maryam Beheshtian, Marzieh Mohseni, Hossein Poustchi, Fariba Ardalani, Khadijeh Jalalvand, Sanaz Arzhangi, Zahra Mohammadi, Shahrouz Khoshbakht, Farid Najafi, Pooneh Nikuei, Mohammad Haddadi, Elham Zohrehvand, Morteza Oladnabi, Akbar Mohammadzadeh, Mandana Hadi Jafari, Tara Akhtarkhavari, Ehsan Shamsi Gooshki, Ali-Akbar Haghdoost, Reza Najafipour, Lisa‐Marie Niestroj, Barbara Helwing, Yasmina Gossmann, Mohammad Reza Toliat, Reza Malekzadeh, Peter Nürnberg, Kimia Kahrizi, Hossein Najmabadi, Michael Nothnagel
Software Mentions: 4
Published: about 5 years ago

10.1186/s40658-018-0218-7

Abstracts of the Total Body PET conference 2018
Cited by: 5
Author(s):
Software Mentions: 4
Published: over 6 years ago

10.3389/fmolb.2017.00025

A Balanced Approach to Adaptive Probability Density Estimation
Cited by: 3
Author(s): Julio A. Kovacs, Cailee Helmick, Willy Wriggers
Software Mentions: 3
Published: over 7 years ago

10.1098/rsos.190282

Territorial landscapes: incorporating density-dependence into wolf habitat selection studies
Cited by: 3
Author(s): Shawn T. O’Neil, Dean E. Beyer, Joseph K. Bump
Software Mentions: 3
Published: about 5 years ago

10.1186/s40462-019-0178-0

Tropical cyclones alter short-term activity patterns of a coastal seabird
Cited by: 9
Author(s): Bradley P. Wilkinson, Yvan G. Satgé, Juliet S. Lamb, Patrick G. R. Jodice
Software Mentions: 3
Published: about 5 years ago

10.1038/s41598-019-51188-8

Patterns of at-sea behaviour at a hybrid zone between two threatened seabirds
Cited by: 5
Author(s): Richard Austin, Russell B. Wynn, Stephen C. Votier, Clive N. Trueman, Miguel McMinn, Ana Rodríguez, Lavinia Suberg, Louise Maurice, Jason Newton, Meritxell Genovart, Clara Péron, David Grémillet, Tim Guilford
Software Mentions: 3
Published: about 5 years ago

10.1186/s12918-017-0488-z

Hilbert-Schmidt and Sobol sensitivity indices for static and time series Wnt signaling measurements in colorectal cancer - part A
Cited by: 2
Author(s): Shriprakash Sinha
Software Mentions: 3
Published: almost 7 years ago

10.1021/acs.jpcb.1c00304

Oligomannose N-Glycans 3D Architecture and Its Response to the FcγRIIIa Structural Landscape
Cited by: 7
Author(s): Carl A Fogarty, Elisa Fadda
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0205981

Characterizing individual variability in mussel (Mytilus galloprovincialis) growth and testing its physiological drivers using Functional Data Analysis
Cited by: 8
Author(s): I. Fuentes-Santos, Uxío Labarta, María José Fernández‐Reiriz
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0049918

Expression of MicroRNAs in the NCI-60 Cancer Cell-Lines
Cited by: 17
Author(s): Santosh K. Patnaik, Jesper Dahlgaard, Wiktor Mazin, Eric Kannisto, Thomas E. Jensen, Steen Knudsen, Sai Yendamuri
Software Mentions: 3
Published: almost 12 years ago

10.1186/s40462-021-00256-8

Identifying resting locations of a small elusive forest carnivore using a two-stage model accounting for GPS measurement error and hidden behavioral states
Cited by: 2
Author(s): Dalton J. Hance, Katie M. Moriarty, Bruce Hollen, Russell W. Perry
Software Mentions: 3
Published: over 3 years ago

10.1002/ece3.2750

Group foraging in Socotra cormorants: A biologging approach to the study of a complex behavior
Cited by: 12
Author(s): Timothée R. Cook, Robert Gubiani, Peter G. Ryan, Sabir Bin Muzaffar
Software Mentions: 3
Published: over 7 years ago

10.3791/56292

Quantification of Information Encoded by Gene Expression Levels During Lifespan Modulation Under Broad-range Dietary Restriction in C. elegans
Cited by: 2
Author(s): Dhaval Patel, Giovanni Diana, Eugeni V. Entchev, Min Zhan, Hang Lu, Quee-Lim Ch'ng
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pcbi.1002321

Spatial Guilds in the Serengeti Food Web Revealed by a Bayesian Group Model
Cited by: 61
Author(s): Edward B. Baskerville, Andrew Dobson, Trevor Bedford, Stefano Allesina, T. Michael Anderson, Mercedes Pascual
Software Mentions: 2
Published: almost 13 years ago

10.1371/journal.pone.0204960

Temporal clustering analysis of endothelial cell gene expression following exposure to a conventional radiotherapy dose fraction using Gaussian process clustering
Cited by: 4
Author(s): Markus Heinonen, Fabien Milliat, Mohamed Amine Benadjaoud, Agnès François, Valérie Buard, Georges Tarlet, Florence d’Alché‐Buc, Olivier Guipaud
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0236176

Optimization of stimulation parameters for epi-retinal implant based on biosafety consideration
Cited by: 2
Author(s): Yijie Lu, Shan Qin, Lei Zhao, Yue Lan, Tianzhun Wu, Bo Qin, Zhen Xu
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0176244

Prediction of crime occurrence from multi-modal data using deep learning
Cited by: 136
Author(s): Hyeon-Woo Kang, Hang-Bong Kang
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0152190

Historical Patterns and Drivers of Spatial Changes in Recreational Fishing Activity in Puget Sound, Washington
Cited by: 13
Author(s): Anne H. Beaudreau, Emily J. Whitney
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0085122

Stochasticity in Natural Forage Production Affects Use of Urban Areas by Black Bears: Implications to Management of Human-Bear Conflicts
Cited by: 136
Author(s): Sharon Baruch‐Mordo, Kenneth Wilson, David L. Lewis, John Broderick, Julie S. Mao, Stewart W. Breck
Software Mentions: 2
Published: almost 11 years ago

10.1002/ece3.3444

Intraspecific and interspecific competition induces density-dependent habitat niche shifts in an endangered steppe bird
Cited by: 23
Author(s): Rocío Tarjuelo, Manuel B. Morales, Beatriz Arroyo, Santi Mañosa, Gérard Bota, Fabián Casas, Juán Traba
Software Mentions: 2
Published: about 7 years ago

10.1002/ece3.1533

Interactions between density, home range behaviors, and contact rates in the Channel Island fox ( Urocyon littoralis )
Cited by: 34
Author(s): John Paul Sánchez, Brian R. Hudgens
Software Mentions: 2
Published: over 9 years ago

10.1038/s41598-019-46771-y

The association between accelerometer-assessed physical activity and respiratory function in older adults differs between smokers and non-smokers
Cited by: 7
Author(s): Mohamed Amine Benadjaoud, Mehdi Menai, Vincent T. van Hees, Vadim Zipunnikov, Jean‐Philippe Regnaux, Mika Kivimäki, Archana Singh‐Manoux, Séverine Sabia
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-74057-1

Precise measurement of correlations between frequency coupling and visual task performance
Cited by: 2
Author(s): Joseph Young, Valentin Dragoi, Behnaam Aazhang
Software Mentions: 2
Published: about 4 years ago

10.1038/s41598-021-92429-z

Whimbrel populations differ in trans-atlantic pathways and cyclone encounters
Cited by: 8
Author(s): Bryan D. Watts, Fletcher M. Smith, Chance Hines, Laura Duval, Diana J. Hamilton, Timothy Keyes, Julie Paquet, Lisa Pirie‐Dominix, Jennie Rausch, Barry R. Truitt, Brad Winn, Paul Woodard
Software Mentions: 2
Published: over 3 years ago

10.1038/s41598-021-97318-z

Trait-mediated shifts and climate velocity decouple an endothermic marine predator and its ectothermic prey
Cited by: 9
Author(s): Lesley H. Thorne, Janet A. Nye
Software Mentions: 2
Published: about 3 years ago

10.1080/13658816.2020.1719495

Spatial crime distribution and prediction for sporting events using social media
Cited by: 37
Author(s): Alina Ristea, Mohammad Al Boni, Bernd Resch, Matthew S. Gerber, Michael Leitner
Software Mentions: 2
Published: almost 5 years ago

Projects: cran: ks

Papers Mentioning ks 45