Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/1471-2105-16-S13-S7

https://doi.org/10.1186/1471-2105-16-S13-S7

Enhancing cancer clonality analysis with integrative genomics

Cited by: 6
Author(s): Erich A. Peterson, Michael Bauer, Shweta S. Chavan, Cody Ashby, Niels Weinhold, Christoph Heuck, Gareth J. Morgan, Donald J. Johann
Published: almost 9 years ago

Software Mentions 7

bioconductor: Clomial
Infers clonal composition of a tumor
Papers that mentioned: 10
cran: ks
Kernel Smoothing
Papers that mentioned: 45
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071
pypi: ks
kolmogorov schmirnov test
Papers that mentioned: 45
pypi: PyClone
Wraps rclone and provides an interface for an installation at the host or container level.
Papers that mentioned: 119
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017