cran: igraph | Projects | Ecosyste.ms: Papers

10.3389/fmicb.2020.01471

Warming, but Not Acidification, Restructures Epibacterial Communities of the Baltic Macroalga Fucus vesiculosus With Seasonal Variability
Cited by: 8
Author(s): Birte Mensch, Sven C. Neulinger, Sven Künzel, Martin Wahl, Ruth A. Schmitz
Software Mentions: 3
Published: about 6 years ago

10.3389/fmicb.2020.01142

Underlying Mechanism of Wild Radix pseudostellariae in Tolerance to Disease Under the Natural Forest Cover
Cited by: 10
Author(s): Hongmiao Wu, Jinshen Xia, Xianjin Qin, Huiming Wu, Shengkai Zhang, Yanlin Zhao, Christopher Rensing, Wenxiong Lin
Software Mentions: 3
Published: about 6 years ago

10.3389/fmicb.2021.665776

Assessing the Response of Ruminal Bacterial and Fungal Microbiota to Whole-Rumen Contents Exchange in Dairy Cows
Cited by: 9
Author(s): Madison S. Cox, Courtney L. Deblois, Garret Suen
Software Mentions: 3
Published: about 5 years ago

10.3389/fmicb.2020.01296

BALOs Improved Gut Microbiota Health in Postlarval Shrimp (Litopenaeus vannamei) After Being Subjected to Salinity Reduction Treatment
Cited by: 13
Author(s): Qingqing Cao, Farhana Najnine, Hongcao Han, Bing Wu, Jin Cai
Software Mentions: 3
Published: about 6 years ago

10.3389/fmicb.2019.00122

A Multi-Kingdom Study Reveals the Plasticity of the Rumen Microbiota in Response to a Shift From Non-grazing to Grazing Diets in Sheep
Cited by: 44
Author(s): Alejandro Belanche, Alison H. Kingston‐Smith, Gareth Griffith, C. J. Newbold
Software Mentions: 3
Published: over 7 years ago

10.3389/fnmol.2019.00030

An Appraisal of the Influence of the Metabotropic Glutamate 5 (mGlu5) Receptor on Sociability and Anxiety
Cited by: 16
Author(s): Arnau Ramos-Prats, Julia Kölldorfer, Elena Paolo, Maximilian Zeidler, Gabriele Schmid, Francesco Ferraguti
Software Mentions: 3
Published: over 7 years ago

10.3389/fnins.2017.00066

A Statistical Method to Distinguish Functional Brain Networks
Cited by: 14
Author(s): André Fujita, Maciel Calebe Vidal, Daniel Yasumasa Takahashi
Software Mentions: 3
Published: over 9 years ago

10.3389/fnins.2021.642324

Network Analysis of the CSF Proteome Characterizes Convergent Pathways of Cellular Dysfunction in ALS
Cited by: 4
Author(s): Alexander G. Thompson, Gray Eg, P. David Charles, Michele T.M. Hu, Kevin Talbot, Roman Fischer, Benedikt M. Kessler, Martin R Turner
Software Mentions: 3
Published: over 5 years ago

10.3389/fnins.2018.00041

Understanding the Generation of Network Bursts by Adaptive Oscillatory Neurons
Cited by: 22
Author(s): Tanguy Fardet, Mathieu Ballandras, Samuel Bottani, Stéphane Métens, Pascal Monceau
Software Mentions: 3
Published: over 8 years ago

10.3389/fonc.2021.656675

Inferring Cell Subtypes and LncRNA Function by a Cell-Specific CeRNA Network in Breast Cancer
Cited by: 2
Author(s): Xin Chen, Jing Xu, Feng Zeng, Chao Yang, Weijun Sun, Yu Tao, Haokun Zhang, Li Yan
Software Mentions: 3
Published: over 5 years ago

10.3389/fpls.2020.575564

Tomato Spotted Wilt Virus Benefits Its Thrips Vector by Modulating Metabolic and Plant Defense Pathways in Tomato
Cited by: 20
Author(s): Punya Nachappa, Jean F. Challacombe, David C. Margolies, James R. Nechols, Anna E. Whitfield, Dorith Rotenberg
Software Mentions: 3
Published: over 5 years ago

10.3389/fpls.2016.01224

Multiple Assembly Rules Drive the Co-occurrence of Orthopteran and Plant Species in Grasslands: Combining Network, Functional and Phylogenetic Approaches
Cited by: 5
Author(s): Bertrand Fournier, Arnaud Mouly, François Gillet
Software Mentions: 3
Published: almost 10 years ago

10.3389/fpls.2017.01217

Evolution of Daily Gene Co-expression Patterns from Algae to Plants
Cited by: 26
Author(s): Pedro de los Reyes, Francisco J. Romero–Campero, Marta Ruiz, Javier Romero, Federico Valverde
Software Mentions: 3
Published: about 9 years ago

10.3389/fpls.2017.00893

Network Analysis Reveals a Common Host–Pathogen Interaction Pattern in Arabidopsis Immune Responses
Cited by: 24
Author(s): Hong Li, Yuan Zhou, Ziding Zhang
Software Mentions: 3
Published: about 9 years ago

10.3389/fpls.2018.00798

Field-Based Metabolomics of Vitis vinifera L. Stems Provides New Insights for Genotype Discrimination and Polyphenol Metabolism Structuring
Cited by: 35
Author(s): Kévin Billet, Benjamin Houillé, Thomas Dugé de Bernonville, Sébastien Besseau, Audrey Oudin, Vincent Courdavault, Guillaume Delanoue, Laurence Guérin, Marc Clastre, Nathalie Giglioli-Guivarc’h, Arnaud Lanoue
Software Mentions: 3
Published: about 8 years ago

10.3389/fpsyt.2018.00598

Diffusion of a Peer-Led Suicide Preventive Intervention Through School-Based Student Peer and Adult Networks
Cited by: 30
Author(s): Trevor A. Pickering, Peter A. Wyman, Karen Schmeelk-Cone, Chelsey Hartley, Thomas W. Valente, Anthony R. Pisani, Kelly L. Rulison, Charles H. Brown, Mark LoMurray
Software Mentions: 3
Published: over 7 years ago

10.3389/fpsyt.2018.00602

Genetic and Environmental Influences on the Affective Regulation Network: A Prospective Experience Sampling Analysis
Cited by: 5
Author(s): Laila Hasmi, Marjan Drukker, Sinan Gülöksüz, Wolfgang Viechtbauer, Evert Thiery, Cathérine Derom, Jim van Os
Software Mentions: 3
Published: over 7 years ago

10.3389/fpsyt.2020.579339

Mapping the Network of Social Cognition Domains in Children With Autism Spectrum Disorder Through Graph Analysis
Cited by: 6
Author(s): Maria Chiara Pino, Roberto Vagnetti, Francesco Masedu, Margherita Attanasio, Sergio Tiberti, Marco Valenti, Monica Mazza
Software Mentions: 3
Published: over 5 years ago

10.3389/fpsyg.2016.00018

Social Network Analysis and Nutritional Behavior: An Integrated Modeling Approach
Cited by: 15
Author(s): Alistair M. Senior, Mathieu Lihoreau, Jérôme Buhl, David Raubenheimer, Stephen J. Simpson
Software Mentions: 3
Published: over 10 years ago

10.3389/fpubh.2020.582405

Care Deficiencies and Super-Organization of American Nursing Homes in Hospital Referral Region
Cited by: 3
Author(s): Tyler Pittman
Software Mentions: 3
Published: over 5 years ago

10.3389/fpubh.2020.587298

Depiction of Vaginal Microbiota in Women With High-Risk Human Papillomavirus Infection
Cited by: 25
Author(s): Zhentong Wei, Hongliang Chen, Chunfeng Wang, Genhua Yang, Song Han, Song‐Ling Zhang
Software Mentions: 3
Published: over 5 years ago

10.3389/fvets.2020.583715

Proximity Interactions in a Permanently Housed Dairy Herd: Network Structure, Consistency, and Individual Differences
Cited by: 15
Author(s): Kareemah Chopra, Holly R. Hodges, Z. E. Barker, Jorge A. Vázquez Diosdado, Jonathan Amory, Tom C. Cameron, Darren P. Croft, Nick Bell, Edward A. Codling
Software Mentions: 3
Published: over 5 years ago

10.1098/rsos.170148

Individual-level movement bias leads to the formation of higher-order social structure in a mobile group of baboons
Cited by: 16
Author(s): Tyler R. Bonnell, Parry M.R. Clarke, S. Peter Henzi, Louise Barrett
Software Mentions: 3
Published: about 9 years ago

10.1098/rsos.200441

Suppression of the TGF-β pathway by a macrolide antibiotic decreases fibrotic responses by ocular fibroblasts in vitro
Cited by: 5
Author(s): Thomas Stahnke, Beata Gajda-Deryło, Anselm Jünemann, Oliver Stachs, Katharina A Sterenczak, Robert Ręjdak, Julia Beck, Ekkehard Schütz, Steffen Möller, Israel Barrantes, Gregor Warsow, Stephan Struckmann, Georg Fuellen
Software Mentions: 3
Published: almost 6 years ago

10.1186/s13014-016-0672-0

Transcriptomic analyses of the radiation response in head and neck squamous cell carcinoma subclones with different radiation sensitivity: time-course gene expression profiles and gene association networks
Cited by: 37
Author(s): Agata Michna, Ulrike Schötz, Martin Selmansberger, Horst Zitzelsberger, Kirsten Lauber, Kristian Unger, Julia Heß
Software Mentions: 3
Published: about 10 years ago

10.1002/jrsm.1329

Automated methods to test connectedness and quantify indirectness of evidence in network meta‐analysis
Cited by: 12
Author(s): Howard Thom, Ian R. White, Nicky J Welton, Guobing Lu
Software Mentions: 3
Published: over 7 years ago

10.1126/sciadv.aaw9724

Mating avoidance in female olive baboons ( Papio anubis ) infected by Treponema pallidum
Cited by: 23
Author(s): Filipa M. D. Paciência, Julie Rushmore, Idrissa S. Chuma, Iddi Lipende, Damien Caillaud, Sascha Knauf, Dietmar Zinner
Software Mentions: 3
Published: over 6 years ago

10.1038/s41597-021-00880-4

A food web including parasites for kelp forests of the Santa Barbara Channel, California
Cited by: 6
Author(s): Dana N. Morton, Cristiana Y. Antonino, Farallon J. Broughton, Lauren N. Dykman, Armand M. Kuris, Kevin D. Lafferty
Software Mentions: 3
Published: over 5 years ago

10.1038/srep09512

Uncovering RNA binding proteins associated with age and gender during liver maturation
Cited by: 9
Author(s): Praneeet Chaturvedi, Yaseswini Neelamraju, Waqar Arif, Auinash Kalsotra, Sarath Chandra Janga
Software Mentions: 3
Published: over 11 years ago

10.1038/srep10540

Fractal features of soil particle size distribution in newly formed wetlands in the Yellow River Delta
Cited by: 29
Author(s): Junbao Yu, Xiaofei Lv, Ben Ma, Huifeng Wu, Siyao Du, Mo Zhou, Yanming Yang, Guoqi Han
Software Mentions: 3
Published: about 11 years ago

10.1038/srep22095

Network centrality and seasonality interact to predict lice load in a social primate
Cited by: 64
Author(s): Julie Duboscq, Valéria Romano, Cédric Sueur, Andrew J. J. MacIntosh
Software Mentions: 3
Published: over 10 years ago

10.1038/srep24926

Scaling in topological properties of brain networks
Cited by: 18
Author(s): Soibam Shyamchand Singh, Budhachandra Khundrakpam, Andrew Reid, John D. Lewis, Alan C. Evans, Romana Ishrat, Bharat Sharma, R. K. Brojen Singh
Software Mentions: 3
Published: over 10 years ago

10.1038/srep26556

Network Signatures of IgG Immune Repertoires in Hepatitis B Associated Chronic Infection and Vaccination Responses
Cited by: 15
Author(s): Ya-Hui Chang, Hui-Chung Kuan, Tsung‐Hsin Hsieh, K. H., Chung-Hsiang Yang, Wei‐Bin Hsu, Shih‐Feng Tsai, Anne Chao, Hong-Hsing Liu
Software Mentions: 3
Published: about 10 years ago

10.1038/srep28429

Exploring pig trade patterns to inform the design of risk-based disease surveillance and control strategies
Cited by: 38
Author(s): Claire Guinat, Anne A. Relun, Ben Wall, Aaron L. Morris, Lucas Dixon, Dirk U. Pfeiffer
Software Mentions: 3
Published: about 10 years ago

10.1038/srep42638

FocusHeuristics – expression-data-driven network optimization and disease gene prediction
Cited by: 16
Author(s): Markus Ernst, Yang Du, Gregor Warsow, Mohamed Hamed, Nicole Endlich, Karlhans Endlich, Hugo Murua Escobar, Lisa-Madeleine Sklarz, Sina Sender, Christian Junghanß, Steffen Möller, Georg Fuellen, Stephan Struckmann
Software Mentions: 3
Published: over 9 years ago

10.1038/srep45823

Natural Scales in Geographical Patterns
Cited by: 11
Author(s): Telmo Menezes, Camille Roth
Software Mentions: 3
Published: over 9 years ago

10.1038/s41598-017-03778-7

Ecological diversity and co-occurrence patterns of bacterial community through soil profile in response to long-term switchgrass cultivation
Cited by: 41
Author(s): Shenggen He, Lixiang Guo, Mengying Niu, Fuhong Miao, Shuo Jiao, Tianming Hu, M. I. E. Long
Software Mentions: 3
Published: about 9 years ago

10.1038/s41598-017-06773-0

Linking the morphological and metabolomic response of Lactuca sativa L exposed to emerging contaminants using GC × GC-MS and chemometric tools
Cited by: 50
Author(s): Carlos Hurtado, Hadi Parastar, Víctor Matamoros, Benjamı́n Piña, Romà Tauler, Josep M. Bayona
Software Mentions: 3
Published: about 9 years ago

10.1038/s41598-017-15598-w

Early diverging lineages within Cryptomycota and Chytridiomycota dominate the fungal communities in ice-covered lakes of the McMurdo Dry Valleys, Antarctica
Cited by: 62
Author(s): Keilor Rojas-Jiménez, Christian Wurzbacher, Elizabeth C. Bourne, Amy Chiuchiolo, John C. Priscu, Hans‐Peter Grossart
Software Mentions: 3
Published: over 8 years ago

10.1038/s41598-017-17330-0

Identification of a gene signature for discriminating metastatic from primary melanoma using a molecular interaction network approach
Cited by: 31
Author(s): Rahul Metri, Abhilash Mohan, Jérémie Nsengimana, Joanna Poźniak, Carmen Molina‐París, Julia Newton-Bishop, D. Timothy Bishop, Nagasuma Chandra
Software Mentions: 3
Published: over 8 years ago

10.1038/s41598-018-20721-6

Network analysis of coronary artery disease risk genes elucidates disease mechanisms and druggable targets
Cited by: 42
Author(s): Harri Lempiäinen, Ingrid Brænne, Tom Michoel, Vinicius Tragante, Baiba Vilne, Tom R. Webb, Theodosios Kyriakou, Johannes Eichner, Lingyao Zeng, Christina Willenborg, Oscar Franzén, Arno Ruusalepp, Anuj Goel, Sander W. van der Laan, Claudia Biegert, Stephen E. Hamby, Husain Ahammad Talukdar, Hassan Foroughi Asl, Martin Dichgans, Tobias Dreker, Mira Graettinger, Philip Gribbon, Thorsten Kessler, Rainer Malik, Matthias Prestel, Barbara Stiller, Christine Schofield, Gérard Pasterkamp, Hugh Watkins, Nilesh J. Samani, Timo Wittenberger, Jeanette Erdmann, Heribert Schunkert, Folkert W. Asselbergs, Johan Björkegren
Software Mentions: 3
Published: over 8 years ago

10.1038/s41598-018-29725-8

Fast Maximum Likelihood Estimation via Equilibrium Expectation for Large Network Data
Cited by: 20
Author(s): Maksym Byshkin, Alex Stivala, Antonietta Mira, Garry Robins, Alessandro Lomi
Software Mentions: 3
Published: almost 8 years ago

10.1038/s41598-018-30845-4

Topological motifs populate complex networks through grouped attachment
Cited by: 4
Author(s): Jae Young Choi, Doheon Lee
Software Mentions: 3
Published: almost 8 years ago

10.1038/s41598-018-32020-1

Structural robustness of mammalian transcription factor networks reveals plasticity across development
Cited by: 3
Author(s): José Luis Caldú-Primo, Elena Álvarez-Buylla, José Dávila-Velderrain
Software Mentions: 3
Published: almost 8 years ago

10.1038/s41598-018-33773-5

Functional eubacteria species along with trans-domain gut inhabitants favour dysgenic diversity in oxalate stone disease
Cited by: 12
Author(s): Mangesh V. Suryavanshi, Shrikant Bhute, Rahul P. Gune, Yogesh S. Shouche
Software Mentions: 3
Published: over 7 years ago

10.1038/s41598-018-37706-0

Epidemiological and molecular forensics of cholera recurrence in Haiti
Cited by: 16
Author(s): Stanislas Rebaudet, Sandra Moore, Emmanuel Rossignol, Hervé Bogreau, Jean Gaudart, Anne‐Cécile Normand, Marie-José Laraque, Paul Adrien, Jacques Boncy, Renaud Piarroux
Software Mentions: 3
Published: over 7 years ago

10.1038/s41598-019-39796-w

Selecting variants of unknown significance through network-based gene-association significantly improves risk prediction for disease-control cohorts
Cited by: 17
Author(s): Anastasis Oulas, George Minadakis, Margarita Zachariou
Software Mentions: 3
Published: over 7 years ago

10.1038/s41598-019-48925-4

Network construction of gastric microbiome and organization of microbial modules associated with gastric carcinogenesis
Cited by: 17
Author(s): Chan Hyuk Park, Jae Gon Lee, Areum Lee, Chang Soo Eun, Dong Soo Han
Software Mentions: 3
Published: almost 7 years ago

10.1038/s41598-019-52023-w

Compartmentalized evolution of Bovine Viral Diarrhoea Virus type 2 in an immunotolerant persistently infected cow
Cited by: 7
Author(s): Barbara Colitti, Chiara Nogarol, Mario Giacobini, Maria Teresa Capucchio, Ilaria Biasato, Sergio Rosati, Luigi Bertolotti
Software Mentions: 3
Published: over 6 years ago

10.1038/s41598-019-53569-5

Qualitative microbiome profiling along a wastewater system in Kampala, Uganda
Cited by: 4
Author(s): Pierre H. H. Schneeberger, Samuel Fuhrimann, Sören L. Becker, Joël F. Pothier, Brion Duffy, Christian Beuret, Jürg E. Frey, Jürg Utzinger
Software Mentions: 3
Published: over 6 years ago

10.1038/s41598-019-54720-y

Statistical characteristics of amino acid covariance as possible descriptors of viral genomic complexity
Cited by: 7
Author(s): C. K. Sruthi, Meher K. Prakash
Software Mentions: 3
Published: over 6 years ago

10.1038/s41598-019-57142-y

Targeting redox metabolism: the perfect storm induced by acrylamide poisoning in the brain
Cited by: 13
Author(s): Demetrio Raldúa, Marta Casado, Eva Prats, Melissa Faria, Francesc Puig‐Castellví, Yolanda Pérez, Ignacio Alfonso, Chuan-Yu Hsu, Mark A. Arick, Natàlia García-Reyero, Tamar Ziv, Shani Ben-Lulu, Arie Admon, Benjamı́n Piña
Software Mentions: 3
Published: over 6 years ago

10.1038/s41598-019-57191-3

Decision-making process during collective movement initiation in golden snub-nosed monkeys (Rhinopithecus roxellana)
Cited by: 8
Author(s): YangQuan Chen, Ruliang Pan, Wang Xiao-wei, Xiao-Guang Qi, Zhao Hong-yan, Songtao Guo, Yi Ren, Weiwei Fu, Zirui Zhu, Baoguo Li
Software Mentions: 3
Published: over 6 years ago

10.1038/s41598-020-60737-5

L-HetNetAligner: A novel algorithm for Local Alignment of Heterogeneous Biological Networks
Cited by: 18
Author(s): Marianna Milano, Tijana Milenković, Mario Cannataro, Pietro Hiram Guzzi
Software Mentions: 3
Published: over 6 years ago

10.1038/s41598-020-67718-8

No evidence for a relationship between social closeness and similarity in resting-state functional brain connectivity in schoolchildren
Cited by: 3
Author(s): Carolyn Beth McNabb, Laura Grace Burgess, Amy Fancourt, Nancy Mulligan, Lily FitzGibbon, Patricia M. Riddell, Kou Murayama
Software Mentions: 3
Published: about 6 years ago

10.1038/s41598-020-72477-7

Play fighting social networks do not predict injuries from later aggression
Cited by: 12
Author(s): Simon P. Turner, Jennifer E. Weller, Irene Camerlink, Gareth Arnott, Taegyu Choi, Andrea Doeschl‐Wilson, Marianne Farish, Simone Foister
Software Mentions: 3
Published: almost 6 years ago

10.1038/s41598-020-73591-2

The spatial and temporal dynamics of global meat trade networks
Cited by: 15
Author(s): Min Gon Chung, Kelly Kapsar, Kenneth A. Frank, Jianguo Liu
Software Mentions: 3
Published: almost 6 years ago

10.1038/s41598-021-85281-8

Characterization of the microbial communities in wheat tissues and rhizosphere soil caused by dwarf bunt of wheat
Cited by: 13
Author(s): Tongshuo Xu, Wenli Jiang, Dandan Qin, Taiguo Liu, Zhang Jian-min, Wanquan Chen, Li Gao
Software Mentions: 3
Published: over 5 years ago

10.1186/1742-6405-8-26

HIV-1 mutational pathways under multidrug therapy
Cited by: 13
Author(s): Glenn Lawyer, André Altmann, Alexander Thielen, Maurizio Zazzi, Anders Sönnerborg, Thomas Lengauer
Software Mentions: 3
Published: over 15 years ago

10.1038/s41598-021-86409-6

Variations in Schedule III prescription patterns in a Medicaid population pre- and post-policy
Cited by: 0
Author(s): Radhakrishnan Nagarajan, Jeffery Talbert, Craig S. Miller, Jeffrey L. Ebersole
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-021-90498-8

Evolution of networks of protein domain organization
Cited by: 20
Author(s): M. Fayez Aziz, Gustavo Caetano‐Anollés
Software Mentions: 3
Published: about 5 years ago

10.1038/s41598-021-93122-x

Quantum inspired community detection for analysis of biodiversity change driven by land-use conversion and climate change
Cited by: 2
Author(s): Sana Akbar, Sri Khetwat Saritha
Software Mentions: 3
Published: about 5 years ago

10.1186/1751-0473-7-12

RMol: a toolset for transforming SD/Molfile structure information into R objects
Cited by: 1
Author(s): Martin Grábner, Курт Вармуза, Matthias Dehmer
Software Mentions: 3
Published: over 13 years ago

10.1038/tp.2017.37

Modeling anorexia nervosa: transcriptional insights from human iPSC-derived neurons
Cited by: 21
Author(s): Priscilla D. Negraes, Fernanda R. Cugola, Roberto H. Herai, Cleber A. Trujillo, Alexandre S. Cristino, Thanathom Chailangkarn, Alysson R. Muotri, Vikas Duvvuri
Software Mentions: 3
Published: over 9 years ago

10.1128/mBio.01793-16

Role of the ESCRT Complexes in Telomere Biology
Cited by: 9
Author(s): Anna K. Dieckmann, Vera Babin, Yaniv Harari, Roland Eils, Rainer König, Brian Luke, Martin Kupiec
Software Mentions: 3
Published: over 9 years ago

10.1128/mBio.02002-18

Network-Guided Discovery of Influenza Virus Replication Host Factors
Cited by: 22
Author(s): Emily E. Ackerman, Eiryo Kawakami, Manami Katoh, Tokiko Watanabe, Shinji Watanabe, Yuriko Tomita, Tiago J. S. Lopes, Yoshikazu Matsuoka, Hiroaki Kitano, Jason E. Shoemaker, Yoshihiro Kawaoka
Software Mentions: 3
Published: over 7 years ago

10.1128/mBio.01470-21

Intra-Ramanome Correlation Analysis Unveils Metabolite Conversion Network from an Isogenic Population of Cells
Cited by: 8
Author(s): Yuehui He, Shi Huang, Peng Zhang, Yicai Ji, Jian Xu
Software Mentions: 3
Published: almost 5 years ago

10.1128/mSystems.00450-19

Oral Microbiome Alterations Associated with Early Childhood Caries Highlight the Importance of Carbohydrate Metabolic Activities
Cited by: 53
Author(s): Yuan Wang, Sa Wang, Chunyan Wu, Xi Chen, Zhuhui Duan, Qian Xu, Wen Jiang, Lei Xu, Tingting Wang, Lei Su, Ying Wang, Yadong Chen, Jie Zhang, Yun Huang, Suman Tong, Cheng Zhou, Shengjue Deng, Nan Qin
Software Mentions: 3
Published: over 6 years ago

10.1038/s41396-021-00913-1

Erosion reduces soil microbial diversity, network complexity and multifunctionality
Cited by: 201
Author(s): Liping Qiu, Qian Zhang, Hansong Zhu, Peter B. Reich, Samiran Banerjee, Marcel G. A. van der Heijden, Michael J. Sadowsky, Satoshi Ishii, Xiaoxu Jia, Mingan Shao, Baoyuan Liu, Huan Jiang, Haiqiang Li, Xiaorong Wei
Software Mentions: 3
Published: over 5 years ago

10.16910/jemr.12.3.4

Improving the pilot selection process by using eye-tracking tools
Cited by: 1
Author(s): Slaviša Vlačić, Aleksandar Knežević, Sanja Rođenkov, Saptarshi Mandal, Panagiotis A. Vitsas
Software Mentions: 3
Published: over 6 years ago

10.1155/2019/9736968

The Potential Link between Gut Microbiota and Serum TRAb in Chinese Patients with Severe and Active Graves’ Orbitopathy
Cited by: 13
Author(s): Tingting Shi, Lin Hua, Hua Wang, Xin Zhong
Software Mentions: 3
Published: over 6 years ago

10.1186/s12939-019-0911-8

Can social network analysis help to include marginalised young women in structural support programmes in Botswana? A mixed methods study
Cited by: 3
Author(s): David Loutfi, Neil Andersson, Susan Law, Jon Salsberg, Jeannie Haggerty, Leagajang Kgakole, Anne Cockcroft
Software Mentions: 3
Published: over 7 years ago

10.1186/s10194-020-1077-x

Burden of migraine in Finland: multimorbidity and phenotypic disease networks in occupational healthcare
Cited by: 12
Author(s): Minna A. Korolainen, Samuli Tuominen, Samu Kurki, Mariann I. Lassenius, Iiro Toppila, Timo Purmonen, Jaana Santaholma, M Nissilä
Software Mentions: 3
Published: over 6 years ago

10.3390/ijerph17031009

Geographical Patterns of Algal Communities Associated with Different Urban Lakes in China
Cited by: 15
Author(s): Shengnan Chen, Hao He, Rongrong Zong, Kaiwen Liu, Miaomiao Yan, Lei Xu, Yutian Miao
Software Mentions: 3
Published: over 6 years ago

10.1002/jia2.25327

Oral abstracts of the 10th IAS Conference on HIV Science, 21‐24 July 2019, Mexico City, Mexico
Cited by: 12
Author(s):
Software Mentions: 3
Published: about 7 years ago

10.1016/j.jid.2019.08.444

IL-36 Promotes Systemic IFN-I Responses in Severe Forms of Psoriasis
Cited by: 58
Author(s): Marika Catapano, Marta Vergnano, Marco Romano, Satveer K. Mahil, Siew Eng Choon, A. D. Burden, Helen Young, Ian Carr, HJ Lachmann, Giovanna Lombardi, Catherine Smith, Francesca D. Ciccarelli, Jonathan Barker, Francesca Capon
Software Mentions: 3
Published: over 6 years ago

10.7554/eLife.13125

Sequential phenotypic constraints on social information use in wild baboons
Cited by: 35
Author(s): Alecia J. Carter, Miquel Torrents-Ticó, Guy Cowlishaw
Software Mentions: 3
Published: over 10 years ago

10.7554/eLife.62365

A large accessory protein interactome is rewired across environments
Cited by: 23
Author(s): Zhimin Liu, Darach Miller, Fangfei Li, Xianan Liu, Sasha F. Levy
Software Mentions: 3
Published: almost 6 years ago

10.3390/ijms21093171

DRUGPATH: The Drug Gene Pathway Meta-Database
Cited by: 3
Author(s): Rajeev Jaundoo, Travis J. A. Craddock
Software Mentions: 3
Published: about 6 years ago

10.3390/ijms22020953

Steroidal Regulation of Oviductal microRNAs Is Associated with microRNA-Processing in Beef Cows
Cited by: 9
Author(s): Ángela María Gonella-Diaza, E. A. Lopes, Kauê Ribeiro da Silva, Ricardo Perecin Nociti, Gabriella Mamede Andrade, Jorge Eduardo Atuesta-Bustos, Juliano Coelho da Silveira, Flávio Vieira Meirelles, Mário Binelli
Software Mentions: 3
Published: over 5 years ago

10.3390/ijms22105056

Cross-Predicting Essential Genes between Two Model Eukaryotic Species Using Machine Learning
Cited by: 6
Author(s): Túlio de Lima Campos, Pasi K. Korhonen, Neil D. Young
Software Mentions: 3
Published: about 5 years ago

10.2196/jmir.6045

Characterizing Twitter Discussions About HPV Vaccines Using Topic Modeling and Community Detection
Cited by: 145
Author(s): Didi Surian, Dat Quoc Nguyen, Georgina Kennedy, Mark Johnson, Enrico Coiera, Adam G. Dunn
Software Mentions: 3
Published: almost 10 years ago

10.1155/2021/8533464

Identification of a Nomogram from Ferroptosis-Related Long Noncoding RNAs Signature to Analyze Overall Survival in Patients with Bladder Cancer
Cited by: 22
Author(s): Yuanshan Cui, Yumeng Chai, Xuanyan Che, Yong Zhang
Software Mentions: 3
Published: almost 5 years ago

10.18632/oncotarget.8308

Dynamic epigenetic changes to VHL occur with sunitinib in metastatic clear cell renal cancer
Cited by: 14
Author(s): Grant D. Stewart, Thomas Powles, Christophe Van Neste, Alison Meynert, Fiach C. O’Mahony, A. Douglas Laird, Dieter Deforce, Filip Van Nieuwerburgh, Geert Trooskens, Wim Van Criekinge, Tim De Meyer, David J. Harrison
Software Mentions: 3
Published: over 10 years ago

10.18632/oncotarget.10947

Integrated analysis miRNA and mRNA profiling in patients with severe oligozoospermia reveals miR-34c-3p downregulates PLCXD3 expression
Cited by: 22
Author(s): Zhiming Li, Zaozao Zheng, Jun Ruan, Zhi Li, Xuan Zhuang, Chi-Meng Tzeng
Software Mentions: 3
Published: almost 10 years ago

10.18632/oncotarget.14918

A meta-analysis of HLA peptidome composition in different hematological entities: entity-specific dividing lines and “pan-leukemia” antigens
Cited by: 11
Author(s): Linus Backert, Daniel J. Kowalewski, Juliane S. Walz, Heiko Schuster, Claudia Berlin, Marian C. Neidert, Mirle Schemionek, Tim H. Brümmendorf, Vladan Vučinić, Dietger Niederwieser, Lothar Kanz, Helmut R. Salih, Oliver Kohlbacher, Katja Weisel, Hans‐Georg Rammensee, Stefan Stevanović, Juliane S. Walz
Software Mentions: 3
Published: over 9 years ago

10.18632/oncotarget.24795

Molecular signatures associated with tumor-specific immune response in melanoma patients treated with dendritic cell-based immunotherapy
Cited by: 11
Author(s): Tamara García-Salum, Andrea Villablanca, Franziska Matthäus, Andrés Tittarelli, Mauricio Baeza, Carlos Pereda, María Alejandra Gleisner, Fermín E. González, Mercedes López, Jörg D. Hoheisel, Johannes Norgauer, Peter J. Gebicke‐Haerter, Flavio Salazar‐Onfray
Software Mentions: 3
Published: over 8 years ago

10.18632/oncotarget.25216

Parenclitic networks for predicting ovarian cancer
Cited by: 25
Author(s): Harry J. Whitwell, Oleg Blyuss, Usha Menon, John F. Timms, Alexey Zaikin
Software Mentions: 3
Published: over 8 years ago

10.1371/journal.pone.0198525

Exploring novel key regulators in breast cancer network
Cited by: 18
Author(s): Shahnawaz Ali, Md. Zubbair Malik, Keilash Chirom, Romana Ishrat
Software Mentions: 2
Published: about 8 years ago

10.1371/journal.pone.0141420

A Network Approach to Bipolar Symptomatology in Patients with Different Course Types
Cited by: 29
Author(s): M.A. Koenders, Roy de Kleijn, Erik J. Giltay, Bernet M. Elzinga, Philip Spinhoven, Annet T. Spijker
Software Mentions: 2
Published: almost 11 years ago

10.1038/sdata.2018.37

A dataset on human navigation strategies in foreign networked systems
Cited by: 3
Author(s): Attila Kő̈rösi, Attila Csoma, Gábor Rétvári, Zalán Heszberger, József Bı́ró, János Tapolcai, István Pelle, Dávid Klajbár, Márton Novák, Valentina Halasi, András Gulyás
Software Mentions: 2
Published: over 8 years ago

10.1038/s41597-019-0056-z

A multi-species repository of social networks
Cited by: 40
Author(s): Pratha Sah, José David Méndez, Shweta Bansal
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0014673

Controlling the Response: Predictive Modeling of a Highly Central, Pathogen-Targeted Core Response Module in Macrophage Activation
Cited by: 33
Author(s): Jason McDermott, Michelle Archuleta, Brian D. Thrall, Joshua N. Adkins, Katrina M. Waters
Software Mentions: 2
Published: over 15 years ago

10.1186/1471-2458-8-308

Worldwide food recall patterns over an eleven month period: A country perspective
Cited by: 11
Author(s): Tamás Nepusz, Andrea Petróczi, Declan P. Naughton
Software Mentions: 2
Published: almost 18 years ago

10.1038/srep07258

A Unifying Framework for Measuring Weighted Rich Clubs
Cited by: 61
Author(s): Jeff Alstott, Pietro Panzarasa, Mikail Rubinov, Edward T. Bullmore, Petra E. Vértes
Software Mentions: 2
Published: over 11 years ago

10.1186/s12889-020-8338-0

Transport-related walking among young adults: when and why?
Cited by: 3
Author(s): Behrang Assemi, Renee Zahnow, Belén Zapata-Diomedi, Mark Hickman, Jonathan Corcoran
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0210148

Validation of modified radio-frequency identification tag firmware, using an equine population case study
Cited by: 4
Author(s): Rachael M. Milwid, Terri L. O’Sullivan, Zvonimir Poljak, Marek Laskowski, Amy L. Greer
Software Mentions: 2
Published: over 7 years ago

10.1038/srep16439

Early maternal loss affects social integration of chimpanzees throughout their lifetime
Cited by: 27
Author(s): Elfriede Kalcher-Sommersguter, Signe Preuschoft, Cornelia Franz-Schaider, Charlotte K. Hemelrijk, Karl Crailsheim, Jorg J. M. Massen
Software Mentions: 2
Published: over 10 years ago

10.1186/s12919-018-0116-y

Application of Bayesian networks to GAW20 genetic and blood lipid data
Cited by: 4
Author(s): Richard Howey, Heather J. Cordell
Software Mentions: 2
Published: almost 8 years ago

10.1038/srep17357

A novel algorithm for analyzing drug-drug interactions from MEDLINE literature
Cited by: 19
Author(s): Ling Yin, Dan Shen, Maxwell Pietsch, Chetan Nagar, Zayd Fadli, Hong Huang, Yi-Cheng Tu, Feng Cheng
Software Mentions: 2
Published: over 10 years ago

Projects: cran: igraph

Science Score: 100/100

Bonuses:

Papers Mentioning igraph 1,555