Projects: cran: gplots
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/gplots
Various R Programming Tools for Plotting Data
35 versions
Latest release: over 4 years ago
156 dependent packages
97,747 downloads last month
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Tal Galili (user)
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Science Score: 85/100
Starting Score: 100 points
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Very Likely Science (85)
Papers Mentioning gplots 2,122
10.1186/s13567-021-00898-x
Klebsiella pneumoniae infection causes mitochondrial damage and dysfunction in bovine mammary epithelial cellsCited by: 11
Author(s): Jia Cheng, Jv Zhang, Jingyue Yang, Bing Yi, Gang Liu, Man Zhou, John P. Kastelic, Bo Han, Jian Gao
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-017-04251-1
Proteomic analysis reveals large amounts of decomposition enzymes and major metabolic pathways involved in algicidal process of Trametes versicolor F21aCited by: 15
Author(s): Xueyan Gao, Congyan Wang, Wei Dai, Shenrong Ren, Fang Tao, Xueli He, Guomin Han, Wei Wang
Software Mentions: 1
Published: about 9 years ago
10.7554/eLife.43963
The ion channel ppk301 controls freshwater egg-laying in the mosquito Aedes aegyptiCited by: 71
Author(s): Benjamin J. Matthews, Meg A Younger, Leslie B. Vosshall
Software Mentions: 1
Published: over 7 years ago
10.3390/nu12082238
Ginseng-Induced Changes to Blood Vessel Dilation and the Metabolome of RatsCited by: 9
Author(s): Hyeon-Jeong Lee, Bomin Kim, Soo Hee Lee, Ju-Tae Sohn, Jae Woong Choi, Chang‐Won Cho, Hee‐Do Hong, Young Kyoung Rhee, Hyun‐Jin Kim
Software Mentions: 1
Published: about 6 years ago
10.3389/fmicb.2017.02300
Bacterial Community Dynamics in Dichloromethane-Contaminated Groundwater Undergoing Natural AttenuationCited by: 22
Author(s): Justin Wright, Veronica Kirchner, W. Bernard, Nikea Ulrich, Christopher J. McLimans, Maria Fernanda Campa, Terry C. Hazen, Tamzen W. Macbeth, David Marabello, Jacob McDermott, Rachel Mackelprang, Kimberly A. Roth, Regina Lamendella
Software Mentions: 1
Published: almost 9 years ago
10.1093/hmg/ddaa146
Pre-natal manifestation of systemic developmental abnormalities in spinal muscular atrophyCited by: 20
Author(s): Anna A. L. Motyl, Kiterie M E Faller, Ewout J N Groen, Ronald A. Kline, Samantha L. Eaton, Leire M. Ledahawsky, Helena Chaytow, Douglas J. Lamont, Thomas M. Wishart, Yu-Ting Huang, Thomas H. Gillingwater
Software Mentions: 1
Published: about 6 years ago
10.1038/s41598-020-72311-0
The phosphoproteomic responses of duck (Cairna moschata) to classical/novel duck reovirus infections in the spleen tissueCited by: 5
Author(s): Tao Yun, Jionggang Hua, Weicheng Ye, Na Zheng, Liu Chen, Cun Zhang
Software Mentions: 1
Published: almost 6 years ago
10.3390/metabo11040227
Pinus pinaster Early Hormonal Defence Responses to Pinewood Nematode (Bursaphelenchus xylophilus) InfectionCited by: 10
Author(s): Ana Margarida Rodrigues, Swen Langer, Isabel Carrasquinho, Edmund T. Bergström, Tony R. Larson, Jane Thomas‐Oates, Carla António
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-020-71967-y
Unique repertoire of anti-carbohydrate antibodies in individual human serumCited by: 13
Author(s): Ralph N D Luetscher, Tanya R. McKitrick, Chao Gao, Akul Y. Mehta, Alyssa M McQuillan, Robert Kardish, Kayluz Frias Boligan, Xuezheng Song, Lenette L. Lu, Jamie Heimburg-Molinaro, Stephan von Gunten, Galit Alter, Richard D. Cummings
Software Mentions: 1
Published: almost 6 years ago
10.3389/fmicb.2021.654783
Reactive Oxygen Species-Related Ceftazidime Resistance Is Caused by the Pyruvate Cycle Perturbation and Reverted by Fe3 + in Edwardsiella tardaCited by: 8
Author(s): Jingzhou Ye, Yubin Su, Xuan‐xian Peng, Hui Li
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-018-32969-z
Integrated evidence reveals a new species in the ancient blue coral genus Heliopora (Octocorallia)Cited by: 27
Author(s): Zoe T. Richards, Nina Yasuda, Taisei Kikuchi, Taryn Foster, Chika Mitsuyuki, Michael Stat, Yoshihisa Suyama, Nerida G. Wilson
Software Mentions: 1
Published: almost 8 years ago
10.1371/journal.pone.0198943
Evaluation of phenotypic and functional stability of RAW 264.7 cell line through serial passagesCited by: 177
Author(s): Bartłomiej Taciak, Maciej Białasek, Agata Braniewska, Zuzanna Sas, Paulina Sawicka, Łukasz Kiraga, Tomasz P. Rygiel, Magdalena Król
Software Mentions: 1
Published: about 8 years ago
10.1186/s13567-016-0392-3
Distinct functional enrichment of transcriptional signatures in pigs with high and low IFN-gamma responses after vaccination with a porcine reproductive and respiratory syndrome virus (PRRSV)Cited by: 6
Author(s): Tahar Aït-Ali, Iván Díaz, Ferran Soldevila, Esmeralda Cano, Yanli Li, Alastair Wilson, Bruno Giotti, Alan Archibald, Enric Mateu, Laila Darwich
Software Mentions: 1
Published: almost 10 years ago
10.3390/metabo10120516
Exploratory Analysis of Commercial Olive-Based Dietary Supplements Using Untargeted and Targeted MetabolomicsCited by: 2
Author(s): Mar Garcia-Aloy, Nelli Groff, Domenico Masuero, Mauro Nisi, Álvaro Junio Pereira Franco, Furio Battelini, Urška Vrhovšek, Fulvio Mattivi
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0214085
Identification of the microbial diversity after fecal microbiota transplantation therapy for chronic intractable constipation using 16s rRNA amplicon sequencingCited by: 35
Author(s): Tadashi Ohara
Software Mentions: 1
Published: over 7 years ago
10.1186/s13567-015-0224-x
phoP, SPI1, SPI2 and aroA mutants of Salmonella Enteritidis induce a different immune response in chickensCited by: 7
Author(s): Marta Elsheimer-Matulova, Karolína Varmužová, Kamila Kýrová, Hana Havlíčková, František Šišák, Masudur Rahman, Ivan Rychlı́k
Software Mentions: 1
Published: almost 11 years ago
10.1099/mgen.0.000287
Co-existence of multiple distinct lineages in Vibrio parahaemolyticus serotype O4:K12Cited by: 0
Author(s): Lin Zhao, Hongyou Chen, Xavier Didelot, Zhenpeng Li, Yinghui Li, Mei‐Ling Chen, Yu Du, Hongqun Zhao, Jie Li, Qinghua Hu, Biao Kan, Min Chen, Bo Pang
Software Mentions: 1
Published: almost 6 years ago
10.3389/fmicb.2018.02639
Transcriptome and Proteome of Fish-Pathogenic Streptococcus agalactiae Are Modulated by TemperatureCited by: 21
Author(s): Guilherme Campos Tavares, Alex F. Carvalho, Felipe Luiz Pereira, Cristiana Perdigão Rezende, Vasco Azevedo, Carlos Augusto Gomes Leal, Henrique César Pereira Figueiredo
Software Mentions: 1
Published: almost 8 years ago
10.1371/journal.pone.0171856
The influence of sexual activity on the vaginal microbiota and Gardnerella vaginalis clade diversity in young womenCited by: 70
Author(s): Lenka A Vodstrcil, Jimmy Twin, Suzanne M. Garland, Christopher K. Fairley, Jane S Hocking, Matthew Law, Erica L Plummer, Katherine Fethers, Eric P F Chow, Sepehr N. Tabrizi, Catriona Bradshaw
Software Mentions: 1
Published: over 9 years ago
10.1186/s12864-021-07993-5
Exploration of the lactation function of protein phosphorylation sites in goat mammary tissues by phosphoproteome analysisCited by: 2
Author(s): Chao Zhu, Junru Zhu, Qiangde Duan, Yue Jiang, Hao Yin, Yizhu He, Fu Li, Xiaopeng An
Software Mentions: 1
Published: almost 5 years ago
10.1371/journal.pntd.0007828
Comparative genomic analysis and molecular examination of the diversity of enterotoxigenic Escherichia coli isolates from ChileCited by: 14
Author(s): David A. Rasko, Felipe Del Canto, Qingwei Luo, James M. Fleckenstein, Roberto Vidal, Tracy H. Hazen
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.pone.0101480
Intrinsic Differences between Oral and Skin KeratinocytesCited by: 90
Author(s): Anna Turabelidze, Shujuan Guo, Allison Yen Chung, Lin Chen, Yang Dai, Phillip T. Marucha, Luisa A. DiPietro
Software Mentions: 1
Published: almost 12 years ago
10.1007/s00125-021-05491-7
Polygenic risk scores predict diabetes complications and their response to intensive blood pressure and glucose controlCited by: 18
Author(s): Johanne Tremblay, Mounsif Haloui, Redha Attaoua, Ramzan Tahir, Camil Hishmih, François Harvey, François-Christophe Marois-Blanchet, Carole Long, Paul Simon, Lara Santucci, Candan Hızel, John Chalmers, Michel Marre, Stephen Harrap, Renata Cífková, Alena Krajčoviechová, David R. Matthews, Bryan Williams, Neil Poulter, Sophia Zoungas, Stephen Colagiuri, Giuseppe Mancia, Diederick E. Grobbee, Anthony Rodgers, Liusheng Liu, Mawussé Agbessi, Vanessa Bruat, Marie-Julie Favé, Michelle P Harwood, Philip Awadalla, Mark Woodward, Julie Hussin, Pavel Hamet
Software Mentions: 1
Published: about 5 years ago
10.3390/metabo10100383
5-CQA and Mangiferin, Two Leaf Biomarkers of Adaptation to Full Sun or Shade Conditions in Coffea arabica L.Cited by: 4
Author(s): Teerarat Duangsodsri, Luc Villain, Ialy Rojo Vestalys, Serge Michalet, Cécile Abdallah, Jean‐Christophe Breitler, Mélanie Bordeaux, Andrés Mauricio Villegas, Marson Raherimandimby, Laurent Legendre, Hervé Etienne, Benoît Bertrand, Claudine Campa
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.pone.0189032
Route of infection alters virulence of neonatal septicemia Escherichia coli clinical isolatesCited by: 12
Author(s): Bryan K. Cole, Edgar J. Scott, Marko Ilikj, David Bard, Darrin R. Akins, David W. Dyer, Susana Chávez-Bueno
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.pone.0037933
Prenatal Famine and Genetic Variation Are Independently and Additively Associated with DNA Methylation at Regulatory Loci within IGF2/H19Cited by: 131
Author(s): Elmar W. Tobi, P. Eline Slagboom, Jenny van Dongen, Dennis Kremer, Aryeh D. Stein, Hein Putter, Bastiaan T. Heijmans, L. H. Lumey
Software Mentions: 1
Published: over 14 years ago
10.1186/ar3457
The gene expression profile of preclinical autoimmune arthritis and its modulation by a tolerogenic disease-protective antigenic challengeCited by: 8
Author(s): Hua Yu, Chi-Wei Lu, Ming Tan, Kamal D. Moudgil
Software Mentions: 1
Published: over 15 years ago
10.1038/s41598-020-72063-x
Rapid growth inhibitory activity of a YafQ-family endonuclease toxin of the Helicobacter pylori tfs4 integrative and conjugative elementCited by: 2
Author(s): Kwadwo Boampong, Stephanie L Smith, Robin M Delahay
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.pone.0063059
Analysis of Nitrification Efficiency and Microbial Community in a Membrane Bioreactor Fed with Low COD/N-Ratio WastewaterCited by: 21
Author(s): Jinxing Ma, Zhiwei Wang, Chaowei Zhu, Shumeng Liu, Qiaoying Wang, Zhichao Wu
Software Mentions: 1
Published: over 13 years ago
10.1002/advs.201900809
Biologically Targeted Photo‐Crosslinkable Nanopatch to Prevent Postsurgical Peritoneal AdhesionCited by: 8
Author(s): Yu Mi, Feifei Yang, Cameron Bloomquist, Youli Xia, Bo Sun, Yanfei Qi, Kyle Wagner, Stephanie A. Montgomery, Tian Zhang, Andrew Z. Wang
Software Mentions: 1
Published: about 7 years ago
10.3389/fmicb.2017.00615
Gene Expression Profiling of Transcription Factors of Helicobacter pylori under Different Environmental ConditionsCited by: 30
Author(s): Miguel A. De la Cruz, Miguel A. Ares, Kristine von Bargen, Leonardo G. Panunzi, Jessica Martínez-Cruz, Hilda‐Alicia Valdez‐Salazar, César Jiménez-Galicia, Javier Torres
Software Mentions: 1
Published: over 9 years ago
10.3389/fmicb.2017.01535
Insights on the Effects of Heat Pretreatment, pH, and Calcium Salts on Isolation of Rare Actinobacteria from Karstic CavesCited by: 48
Author(s): Bao‐Zhu Fang, Nimaichand Salam, Ming-Xian Han, Jian‐Yu Jiao, Juan Cheng, Du Wei, Min Xiao, Wenjun Li
Software Mentions: 1
Published: about 9 years ago
10.1186/1471-2164-11-332
Understanding the evolutionary relationships and major traits of Bacillus through comparative genomicsCited by: 142
Author(s): Luis David Alcaraz, Gabriel Moreno‐Hagelsieb, Luis E. Eguiarte, Valeria Souza, Luis Herrera-Estrella, Gabriela Olmedo
Software Mentions: 1
Published: over 16 years ago
10.1038/s41598-018-34862-1
Arabidopsis molybdenum cofactor sulfurase ABA3 contributes to anthocyanin accumulation and oxidative stress tolerance in ABA-dependent and independent waysCited by: 35
Author(s): S. Watanabe, Muneo Sato, Yuji Sawada, Maho Tanaka, Atsushi Matsui, Yuka Kanno, Masami Yokota Hirai, Motoaki Seki, Atsushi Sakamoto, Mitsunori Seo
Software Mentions: 1
Published: almost 8 years ago
10.1264/jsme2.ME20081
Comparative Analysis of Microbial Communities in Fronds and Roots of Three Duckweed Species: <i>Spirodela polyrhiza</i>, <i>Lemna minor</i>, and <i>Lemna aequinoctialis</i>Cited by: 15
Author(s): Tomoki Iwashita, Yasuhiro Tanaka, Hideyuki Tamaki, Yasuko Yoneda, Ayaka Makino, Yuka Tateno, Li Yan, Tadashi Toyama, Yoichi Kamagata, Koji Mori
Software Mentions: 1
Published: over 6 years ago
10.1186/1476-4598-9-303
Investigation of DNA damage response and apoptotic gene methylation pattern in sporadic breast tumors using high throughput quantitative DNA methylation analysis technologyCited by: 33
Author(s): Ranjana Pal, Niraj Kumar Srivastava, Rupali Chopra, Sailesh Gochhait, Pawan Gupta, Neeraj Prakash, Gaurav Agarwal, R. Bamezai
Software Mentions: 1
Published: almost 16 years ago
10.1186/1471-2164-10-S1-S4
Genome-wide prediction of cis-acting RNA elements regulating tissue-specific pre-mRNA alternative splicingCited by: 29
Author(s): Xin Wang, Kejun Wang, Milan Radovich, Yue Wang, Guohua Wang, Weixing Feng, Jeremy R. Sanford, Yunlong Liu
Software Mentions: 1
Published: about 17 years ago
10.1371/journal.pone.0240947
A comprehensive examination of the lysine acetylation targets in paper mulberry based on proteomics analysesCited by: 4
Author(s): Ping Li, Chao Chen, Yibo Dong
Software Mentions: 1
Published: over 5 years ago
10.15252/msb.20145857
Systems‐level quantification of division timing reveals a common genetic architecture controlling asynchrony and fate asymmetryCited by: 27
Author(s): Vincy Wing Sze Ho, Ming Kin Wong, Xiaopeng An, Daogang Guan, Jiaofang Shao, Hon Chun Kaoru Ng, Xiaoliang Ren, Kan He, Jinyue Liao, Y U W Ang, Long Chen, Xiaotai Huang, Bin Yan, Yiji Xia, Leanne Lai Hang Chan, King Lau Chow, Hong Yan, Zhongying Zhao
Software Mentions: 1
Published: over 11 years ago
10.1590/1678-4685-GMB-2019-0401
Skin transcriptional profiles in Oophaga poison frogsCited by: 1
Author(s): Andrés Posso‐Terranova, José Á. Andrés
Software Mentions: 1
Published: over 6 years ago
10.1186/s12711-016-0184-2
Genetic architecture of fatty acid composition in the longissimus dorsi muscle revealed by genome-wide association studies on diverse pig populationsCited by: 44
Author(s): Wanchang Zhang, Junjie Zhang, Leilei Cui, Junwu Ma, Congying Chen, Huashui Ai, Xianhua Xie, Li Lin, Shijun Xiao, Lusheng Huang, Jun Ren, Bin Yang
Software Mentions: 1
Published: over 10 years ago
10.1038/s41598-017-06999-y
Locus of Adhesion and Autoaggregation (LAA), a pathogenicity island present in emerging Shiga Toxin–producing Escherichia coli strainsCited by: 60
Author(s): David A. Montero, Juliana Velasco, Felipe Del Canto, José L. Puente, Nora Lía Padola, David A. Rasko, Mauricio J. Farfán, Juan Carlos Salazar, Roberto Vidal
Software Mentions: 1
Published: about 9 years ago
10.1371/journal.pntd.0004323
Ixodes scapularis Tick Saliva Proteins Sequentially Secreted Every 24 h during Blood FeedingCited by: 103
Author(s): Tae Kwon Kim, Lucas Tirloni, Antônio Frederico Michel Pinto, James J. Moresco, John R. Yates, Itabajara da Silva Vaz, Albert Mulenga
Software Mentions: 1
Published: over 10 years ago
10.1534/genetics.117.203521
Toward Universal Forward Genetics: Using a Draft Genome Sequence of the Nematode <i>Oscheius tipulae</i> To Identify Mutations Affecting Vulva DevelopmentCited by: 17
Author(s): Fabrice Besnard, Georgios Koutsovoulos, Sana Dieudonné, Mark Blaxter, Marie Anne Félix
Software Mentions: 1
Published: about 9 years ago
10.1186/s13075-019-2067-8
Unique primed status of microglia under the systemic autoimmune condition of lupus-prone miceCited by: 15
Author(s): Akihiro Nomura, Daisuke Noto, Goh Murayama, Asako Chiba, Sachiko Miyake
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.pgen.1008068
The H3K27me3 demethylase REF6 promotes leaf senescence through directly activating major senescence regulatory and functional genes in ArabidopsisCited by: 43
Author(s): Xiaolei Wang, Jiong Gao, Shan Gao, Yi Song, Zhen Yang, Kálmán Benke
Software Mentions: 1
Published: over 7 years ago
10.1186/gb-2012-13-8-r71
A gene expression profile of stem cell pluripotentiality and differentiation is conserved across diverse solid and hematopoietic cancersCited by: 67
Author(s): Nathan Palmer, Patrick Raphael Schmid, Bonnie Berger, Isaac S. Kohane
Software Mentions: 1
Published: over 14 years ago
10.1186/1471-2164-10-296
Genomic diversity of pathogenic Escherichia coli of the EHEC 2 clonal complexCited by: 24
Author(s): Galeb Abu-Ali, David W. Lacher, Lukas M. Wick, Weihong Qi, Thomas S. Whittam
Software Mentions: 1
Published: over 17 years ago
10.1038/s41598-020-76836-2
Similarities and differences between the ‘cytokine storms’ in acute dengue and COVID-19Cited by: 23
Author(s): Shashika Dayarathna, Chandima Jeewandara, Laksiri Gomes, Gayasha Somathilaka, Deshni Jayathilaka, Vimalahan Vimalachandran, Ananda Wijewickrama, Eranga Narangoda, Damayanthi Idampitiya, Graham S. Ogg, Gathsaurie Neelika Malavige
Software Mentions: 1
Published: almost 6 years ago
10.3390/v8100286
Maporal Hantavirus Causes Mild Pathology in Deer Mice (Peromyscus maniculatus)Cited by: 12
Author(s): Amanda L. McGuire, Kaitlyn Miedema, Joseph R. Fauver, Amber B. Rico, Tawfik Aboellail, Sandra L. Quackenbush, Ann Hawkinson, Tony Schountz
Software Mentions: 1
Published: almost 10 years ago
10.3390/nu10101510
Altered Dairy Protein Intake Does Not Alter Circulatory Branched Chain Amino Acids in Healthy Adults: A Randomized Controlled TrialCited by: 14
Author(s): Utpal Kumar Prodhan, Amber M. Milan, Eric B. Thorstensen, Matthew P. G. Barnett, Ralph Stewart, Jocelyne Benatar, David Cameron‐Smith
Software Mentions: 1
Published: almost 8 years ago
10.1038/s41598-020-78484-y
Metabolomics analysis of plasma and adipose tissue samples from mice orally administered with polydextrose and correlations with cecal microbiotaCited by: 7
Author(s): Markku Saarinen, Olli Kärkkäinen, Kati Hanhineva, Kirsti Tiihonen, Ashley A. Hibberd, Kari Mäkelä, Ghulam Shere Raza, Karl‐Heinz Herzig, Heli Anglenius
Software Mentions: 1
Published: over 5 years ago
10.1002/sctm.20-0199
Human induced pluripotent stem cell-derived lung organoids in an ex vivo model of the congenital diaphragmatic hernia fetal lungCited by: 21
Author(s): Shaun M. Kunisaki, Guihua Jiang, Juan Carlos Biancotti, Kenneth K. Y. Ho, Briana R. Dye, Allen Liu, Jason R. Spence
Software Mentions: 1
Published: almost 6 years ago
10.1111/acel.12379
Atypical antidepressants extend lifespan of<i>Caenorhabditis elegans</i>by activation of a non‐cell‐autonomous stress responseCited by: 17
Author(s): Sunitha Rangaraju, Gregory M. Solis, S. Andersson, Rafael L. Gomez‐Amaro, Rozina Kardakaris, Caroline D. Broaddus, Alexander B. Niculescu, Michael Petrascheck
Software Mentions: 1
Published: about 11 years ago
10.1186/s13046-020-01773-x
Histone tail analysis reveals H3K36me2 and H4K16ac as epigenetic signatures of diffuse intrinsic pontine gliomaCited by: 16
Author(s): Shejuan An, Jeannie M. Camarillo, Tai‐Chung Huang, Daphne Li, Juliette A. Morris, Madeline Zoltek, Jin Qi, Mandana Behbahani, Madhuri Kambhampati, Neil L. Kelleher, Javad Nazarian, Paul M. Thomas, Amanda Saratsis
Software Mentions: 1
Published: almost 6 years ago
10.1093/ve/vey009
The virome of Drosophila suzukii, an invasive pest of soft fruitCited by: 51
Author(s): Nathan Medd, Simon Fellous, Fergal M Waldron, Anne Xuéreb, M. Nakai, J. V. Cross, Darren J. Obbard
Software Mentions: 1
Published: over 8 years ago
10.1186/s13046-021-01946-2
Integrin alpha-V is an important driver in pancreatic adenocarcinoma progressionCited by: 10
Author(s): Marius Kemper, Alina Schiecke, Hanna Maar, С. В. Никулин, Andrey Poloznikov, Vladimir Galatenko, Michael Tachezy, Florian Gebauer, Tobias Lange, Kristoffer Riecken, Alexander G. Tonevitsky, Achim Aigner, Jakob R. Izbicki, Udo Schumacher, Daniel Wicklein
Software Mentions: 1
Published: about 5 years ago
10.1371/journal.pntd.0007758
Time-resolved proteomic profile of Amblyomma americanum tick saliva during feedingCited by: 35
Author(s): Tae Kwon Kim, Lucas Tirloni, Antônio Frederico Michel Pinto, Jolene K. Diedrich, James J. Moresco, John R. Yates, Itabajara da Silva Vaz, Albert Mulenga
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-020-80937-3
The impact of smoking different tobacco types on the subgingival microbiome and periodontal health: a pilot studyCited by: 12
Author(s): Sausan Al Kawas, Farah Al-Marzooq, Betul Rahman, Jenni A. Shearston, Hiba Saad, Dalenda Benzina, Michael Weitzman
Software Mentions: 1
Published: over 5 years ago
10.1186/s12864-015-2151-7
Comprehensive characterization of a time-course transcriptional response induced by autotoxins in Panax ginseng using RNA-SeqCited by: 23
Author(s): Bin Wu, Qiliang Long, Yuan Gao, Zi Wang, Tianwei Shao, Yanan Liu, Yong Li, Wanlong Ding
Software Mentions: 1
Published: almost 11 years ago
10.1084/jem.20170771
B1a B cells require autophagy for metabolic homeostasis and self-renewalCited by: 90
Author(s): Adam J. Clarke, Thomas Riffelmacher, Daniel Braas, Richard J. Cornall, Anna Katharina Simon
Software Mentions: 1
Published: over 8 years ago
10.1186/1471-2164-10-544
Differentially expressed genes for aggressive pecking behaviour in laying hensCited by: 21
Author(s): Bart Buitenhuis, Jakob Hedegaard, Luc Janss, Peter Sørensen
Software Mentions: 1
Published: over 17 years ago
10.3390/metabo9060105
Exo-Metabolites of Phaseolus vulgaris-Nodulating Rhizobial StrainsCited by: 8
Author(s): Diana Montes-Grajales, Nuria Esturau‐Escofet, Baldomero Esquivel, Esperanza Martínez‐Romero
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0182092
Quantitative proteomics in A30P*A53T α-synuclein transgenic mice reveals upregulation of Sel1lCited by: 8
Author(s): Jieyu Yan, Pei Zhang, Fengjuan Jiao, Qingzhi Wang, Feng He, Qian Zhang, Zheng Zhang, Ze-Xi Lv, Xiang Peng, Hongwei Cai, Bo Tian
Software Mentions: 1
Published: about 9 years ago
10.1371/journal.pone.0052481
Primed Pluripotent Cell Lines Derived from Various Embryonic Origins and Somatic Cells in PigCited by: 60
Author(s): Jin Kyu Park, Hye Sun Kim, Kyungjun Uh, Kwang‐Hwan Choi, Hyeong Min Kim, Taeheon Lee, Byung Chul Yang, Hyun Jong Kim, Hak Hyun Ka, Heebal Kim, Chang Kyu Lee
Software Mentions: 1
Published: over 13 years ago
10.1371/journal.pone.0116915
SHBG Gene Polymorphism (rs1799941) Associates with Metabolic Syndrome in Children and AdolescentsCited by: 7
Author(s): Marquitta J. White, Fatih Eren, Deniz Ağırbaşlı, Scott M. Williams, Mehmet Ağırbaşlı
Software Mentions: 1
Published: over 11 years ago
10.1038/s41598-021-81540-w
Photoperiodic regulation of dopamine signaling regulates seasonal changes in retinal photosensitivity in miceCited by: 7
Author(s): Kousuke Okimura, Yusuke Nakane, Taeko Nishiwaki‐Ohkawa, Takashi Yoshimura
Software Mentions: 1
Published: over 5 years ago
10.1093/gbe/evu181
Genomic Organization, Transcriptomic Analysis, and Functional Characterization of Avian α- and β-Keratins in Diverse Feather FormsCited by: 57
Author(s): Chen Siang Ng, Ping Wu, Wen‐Lang Fan, Jie Yan, Chih-Kuan Chen, Yu-Ting Lai, Siao-Man Wu, Chi-Tang Mao, Junjie Chen, Mei-Yeh Jade Lu, Meng‐Ru Ho, Randall B. Widelitz, Chih‐Feng Chen, Cheng‐Ming Chuong, Wen-Hsiung Li
Software Mentions: 1
Published: about 12 years ago
10.1186/s12864-018-5320-7
Analysis of the distribution of assimilation products and the characteristics of transcriptomes in rice by submergence during the ripening stageCited by: 5
Author(s): Hyeon Seok Lee, Woon Ha Hwang, Jae Hyeok Jeong, Seung Hyeon Ahn, Jeong Seon Baek, Han Yong Jeong, Hong Kyu Park, Bon Il Ku, Jong Tak Yun, Geon Hwi Lee, Kyung San Choi
Software Mentions: 1
Published: over 7 years ago
10.1186/gm279
Classification of unknown primary tumors with a data-driven method based on a large microarray reference databaseCited by: 12
Author(s): K. Ojala, Sami Kilpinen, Olli Kallioniemi
Software Mentions: 1
Published: over 15 years ago
10.1186/1471-2164-10-200
Genome wide expression analysis of CBS domain containing proteins in Arabidopsis thaliana (L.) Heynh and Oryza sativa L. reveals their developmental and stress regulationCited by: 98
Author(s): Hemant R. Kushwaha, Anil Kumar Singh, Sudhir K. Sopory, Sneh L. Singla‐Pareek, Ashwani Pareek
Software Mentions: 1
Published: over 17 years ago
10.1371/journal.pone.0102949
Differences in Gene Expression between Mouse and Human for Dynamically Regulated Genes in Early EmbryoCited by: 25
Author(s): Elo Madissoon, Virpi Töhönen, Liselotte Vesterlund, Shintaro Katayama, Per Unneberg, José Inzunza, Outi Hovatta, Juha Kere
Software Mentions: 1
Published: about 12 years ago
10.1186/1471-2164-13-359
The ribonuclease Dis3 is an essential regulator of the developmental transcriptomeCited by: 32
Author(s): Dong Hou, Miriam Osés Ruiz, Erik D. Andrulis
Software Mentions: 1
Published: about 14 years ago
10.1002/stem.1991
Multipotent Caudal Neural Progenitors Derived from Human Pluripotent Stem Cells That Give Rise to Lineages of the Central and Peripheral Nervous SystemCited by: 78
Author(s): Mark Denham, Kouichi Hasegawa, Trevelyan R. Menheniott, Ben Rollo, Dongcheng Zhang, Shelley R. Hough, Abdullah J Alshawaf, Fabia Febbraro, Samiramis Ighaniyan, Joseph Y.-T. Leung, David A. Elliott, Donald F. Newgreen, Martín F. Pera, Mirella Dottori
Software Mentions: 1
Published: over 11 years ago
10.1186/s13073-017-0497-y
Integrated Bayesian analysis of rare exonic variants to identify risk genes for schizophrenia and neurodevelopmental disordersCited by: 78
Author(s): Hoang Nguyen, Julien Bryois, April Kim, Amanda Dobbyn, Laura Huckins, Ana B. Muñoz-Manchado, Douglas M. Ruderfer, Giulio Genovese, Menachem Fromer, Xiaowei Xu, Dalila Pinto, Sten Linnarsson, Matthijs Verhage, August B. Smit, Jens Hjerling-Leffler, Joseph D. Buxbaum, Christina M. Hultman, Pamela Sklar, Shaun Purcell, Kasper Lage, Xin He, Patrick F. Sullivan, Eli A. Stahl
Software Mentions: 1
Published: almost 9 years ago
10.1371/journal.pone.0226425
Genome-wide comparisons of gene expression in adult versus elderly burn patientsCited by: 5
Author(s): Stephanie Dreckmann, Saeid Amini-Nik, Ronald G. Tompkins, Miliana Vojvodic, Marc G. Jeschke
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0036358
Wild Skylarks Seasonally Modulate Energy Budgets but Maintain Energetically Costly Inflammatory Immune Responses throughout the Annual CycleCited by: 65
Author(s): Arne Hegemann, Kevin D. Matson, Maaike A. Versteegh, B. Irene Tieleman
Software Mentions: 1
Published: over 14 years ago
10.1155/2020/8816824
Clinicopathological and Molecular Characteristics of Pleomorphic Invasive Lobular CarcinomaCited by: 3
Author(s): Jennifer Segar, Ritu Pandey, Kiah Farr, Raymond B. Nagle, Lauren LeBeau, Victor Gonzalez, Pavani Chalasani
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.pone.0110076
Characterization of Egg Laying Hen and Broiler Fecal Microbiota in Poultry Farms in Croatia, Czech Republic, Hungary and SloveniaCited by: 63
Author(s): Petra Vídeňská, Masudur Rahman, Marcela Faldynová, Vladimír Babák, Marta Matulová, Estella Prukner‐Radovčić, Ivan Križek, Sonja Smole-Možina, Jasna Kovač, Ama Szmolka, Béla Nagy, Karel Sedlář, Darina Čejková, Ivan Rychlı́k
Software Mentions: 1
Published: almost 12 years ago
10.1186/s12864-015-2258-x
Genome-wide analysis of the basic leucine zipper (bZIP) transcription factor gene family in six legume genomesCited by: 69
Author(s): Zhihui Wang, Ke Cheng, Ling‐Shu Wan, Liying Yan, Huifang Jiang, Liu S, Yong Lei, Boshou Liao
Software Mentions: 1
Published: almost 11 years ago
10.1093/gigascience/giy124
Cost-effective assembly of the African wild dog (<i>Lycaon pictus</i>) genome using linked readsCited by: 19
Author(s): Ellie E. Armstrong, Ryan W. Taylor, Stefan Prost, Peter Blinston, Esther van der Meer, Hillary Madzikanda, Olivia Mufute, Roseline Mandisodza‐Chikerema, John Stuelpnagel, Claudio Sillero‐Zubiri, Dmitri A. Petrov
Software Mentions: 1
Published: almost 8 years ago
10.1371/journal.pone.0111267
Differential Expressions of the Alternatively Spliced Variant mRNAs of the µ Opioid Receptor Gene, OPRM1, in Brain Regions of Four Inbred Mouse StrainsCited by: 32
Author(s): Jin Xu, Zhigang Lu, Mingming Xu, Grace C. Rossi, Benjamin Kest, Amanda R. Waxman, Gavril W. Pasternak, Ying–Xian Pan
Software Mentions: 1
Published: almost 12 years ago
10.1155/2019/5292787
Competitive Endogenous RNA Network Construction and Comparison of Lung Squamous Cell Carcinoma in Smokers and NonsmokersCited by: 10
Author(s): Yan Yao, Tingting Zhang, Ling‐Yu Qi, Ruijuan Liu, Gongxi Liu, Xue Wang, Jie Li, Jia Li, Changgang Sun
Software Mentions: 1
Published: over 6 years ago
10.1186/s12934-016-0577-5
Genome-wide Escherichia coli stress response and improved tolerance towards industrially relevant chemicalsCited by: 45
Author(s): Martin Holm Rau, Patricia Calero, Rebecca M. Lennen, Katherine S. Long, Alex Toftgaard Nielsen
Software Mentions: 1
Published: almost 10 years ago
10.1097/MD.0000000000011887
Integrated analysis of a competing endogenous RNA network reveals key lncRNAs as potential prognostic biomarkers for human bladder cancerCited by: 36
Author(s): Naiqiang Zhu, Jingyi Hou, Yuanhao Wu, Jinxin Liu, Geng Li, Wenjia Zhao, Guiyun Ma, Bin Chen, Youxin Song
Software Mentions: 1
Published: about 8 years ago
10.1371/journal.pone.0150266
Biological Characterization of Gene Response to Insulin-Induced Hypoglycemia in Mouse RetinaCited by: 6
Author(s): Martine Emery, Natacha Nanchen, Frédéric Preitner, Mark Ibberson, Raphaël Roduit
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.pone.0153476
Impact of the Chromatin Remodeling Factor CHD1 on Gut Microbiome Composition of Drosophila melanogasterCited by: 11
Author(s): Sebald Johanna, Michaela Willi, Ines Schoberleitner, Anne Krogsdam, Dorothea Orth−Höller, Zlatko Trajanoski, Alexandra Lusser
Software Mentions: 1
Published: over 10 years ago
10.1186/s12864-019-5737-7
Comparative proteomic analysis of okra (Abelmoschus esculentus L.) seedlings under salt stressCited by: 36
Author(s): Yihua Zhan, Qingfei Wu, Yue Chen, Mengling Tang, Chendong Sun, Junwei Sun, Chenliang Yu
Software Mentions: 1
Published: over 7 years ago
10.3390/cells9041003
Sofosbuvir Activates EGFR-Dependent Pathways in Hepatoma Cells with Implications for Liver-Related Pathological ProcessesCited by: 9
Author(s): Denisa Bojkova, Sandra Westhaus, Rui Costa, Lejla Timmer, Nora Funkenberg, Marek Korencak, Hendrik Streeck, Florian W. R. Vondran, Ruth Broering, Stefan Heinrichs, Karl S. Lang, Sandra Ciesek
Software Mentions: 1
Published: over 6 years ago
10.3390/jof7090764
Variations in the Community Structure of Fungal Microbiota Associated with Apple Fruit Shaped by Fruit Bagging-Based PracticeCited by: 1
Author(s): Punda Khwantongyim, Somying Wansee, Xi Lu, Wei Zhang, Guangyu Sun
Software Mentions: 1
Published: almost 5 years ago
10.1371/journal.pone.0004677
Insect-Specific microRNA Involved in the Development of the Silkworm Bombyx moriCited by: 86
Author(s): Yong Zhang, Xue Zhou, Xie Ge, Jiang-Hao Jiang, Muwang Li, Shihai Jia, Xiaonan Yang, Yunchao Kan, Miao Xing, Guoping Zhao, Fēi Li, Yongping Huang
Software Mentions: 1
Published: over 17 years ago
10.1371/journal.pone.0227575
The interoceptive hippocampus: Mouse brain endocrine receptor expression highlights a dentate gyrus (DG)–cornu ammonis (CA) challenge–sufficiency axisCited by: 12
Author(s): Richard Lathe, Sheena Singadia, Crispin Y. Jordan, Gernot Riedel
Software Mentions: 1
Published: over 6 years ago
10.3390/cells10061495
Phenotypic Characterization by Single-Cell Mass Cytometry of Human Intrahepatic and Peripheral NK Cells in Patients with Hepatocellular CarcinomaCited by: 6
Author(s): Yuichi Yoshida, Sachiyo Yoshio, Taiji Yamazoe, Taizo Mori, Yuriko Tsustui, Hironari Kawai, Shiori Yoshikawa, Takasuke Fukuhara, Tomoyoshi Okamoto, Yoshihiro Ono, Yu Takahashi, Ryuki Hashida, Takumi Kawaguchi, Akinobu Taketomi, Tatsuya Kanto
Software Mentions: 1
Published: about 5 years ago
10.1186/s12864-015-2153-5
Co-occurrence of resistance genes to antibiotics, biocides and metals reveals novel insights into their co-selection potentialCited by: 514
Author(s): Chandan Pal, Johan Bengtsson‐Palme, Erik Kristiansson, D. G. Joakim Larsson
Software Mentions: 1
Published: almost 11 years ago
10.3390/cancers13143432
Characterization of Novel Progression Factors in Castration-Resistant Prostate Cancer Based on Global Comparative Proteome AnalysisCited by: 4
Author(s): Ann-Yae Na, Sie−Young Choi, Eun‐Ju Yang, Kwang-Hyeon Liu, Sunghwan Kim, Hyun Jin Jung, Youngshik Choe, Yun‐Sok Ha, Tae Gyun Kwon, Jun Nyung Lee, Sangkyu Lee
Software Mentions: 1
Published: about 5 years ago
10.1038/s41598-021-94060-4
Observing the silent world under COVID-19 with a comprehensive impact analysis based on human mobilityCited by: 8
Author(s): Shaobin Wang, Yun Tong, Yupeng Fan, Haimeng Liu, Jun Wu, Zheye Wang, Chuanglin Fang
Software Mentions: 1
Published: about 5 years ago
10.1186/s40249-021-00821-8
Gut microbiota signatures in Schistosoma japonicum infection-induced liver cirrhosis patients: a case–control studyCited by: 11
Author(s): Qifeng Gui, Huilin Jin, Feng Zhu, Haifeng Lü, Qin Zhang, Jia Xu, Yunmei Yang, Chi Xiao
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0061463
Shedding Light on the Microbial Community of the Macropod Foregut Using 454-Amplicon PyrosequencingCited by: 29
Author(s): Lisa-Maree Gulino, D. Ouwerkerk, Alicia Kang, A. J. Maguire, Marco Kienzle, Athol V. Klieve
Software Mentions: 1
Published: over 13 years ago
10.3390/insects11080543
Functional Variation in Dipteran Gut Bacterial Communities in Relation to Their Diet, Life Cycle Stage and HabitatCited by: 12
Author(s): Rebekka Sontowski, Nicole M. van Dam
Software Mentions: 1
Published: about 6 years ago
10.1038/s41598-017-09439-z
α7 nicotinic acetylcholine receptor signaling modulates the inflammatory phenotype of fetal brain microglia: first evidence of interference by iron homeostasisCited by: 22
Author(s): Marina Farrel Cortês, Mingju Cao, H. L. Liu, Craig S. Moore, Lucien Daniel Durosier, Patrick Burns, Gilles Fecteau, André Desrochers, Luis B. Barreiro, Jack P. Antel, Martin G. Frasch
Software Mentions: 1
Published: almost 9 years ago