Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: ggplot2

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
48 versions
Latest release: about 1 year ago
4,921 dependent packages
2,865,232 downloads last month

Papers Mentioning ggplot2 11,441

10.1038/s41598-018-36518-6
Forming social impressions from voices in native and foreign languages
Cited by: 23
Author(s): Cristina Baus, Phil McAleer, Katherine Marcoux, Pascal Belin, Albert Costa
Software Mentions: 2
Published: almost 6 years ago
10.7717/peerj.494
RIM-DB: a taxonomic framework for community structure analysis of methanogenic archaea from the rumen and other intestinal environments
Cited by: 125
Author(s): Henning Seedorf, Sandra Kittelmann, Gemma Henderson, Peter H. Janssen
Software Mentions: 2
Published: over 10 years ago
10.1038/s41598-018-37294-z
STAT3 is activated in multicellular spheroids of colon carcinoma cells and mediates expression of IRF9 and interferon stimulated genes
Cited by: 7
Author(s): Elin Edsbäcker, Jason T. Serviss, Iryna Kolosenko, Caroline Palm-Apergi, Angelo De Milito, Katja Pokrovskaja Tamm
Software Mentions: 2
Published: almost 6 years ago
10.1038/s41598-018-37547-x
Effects of defined gut microbial ecosystem components on virulence determinants of Clostridioides difficile
Cited by: 19
Author(s): Christian Carlucci, Carys S Jones, Kaitlyn Oliphant, Sandi Yen, Michelle Daigneault, Charley Carriero, Avery Robinson, Elaine O. Petrof, J. Scott Weese, Emma Allen‐Vercoe
Software Mentions: 2
Published: almost 6 years ago
10.1038/s41598-018-36582-y
Spatial heterogeneity of heavy metal contamination in soils and plants in Hefei, China
Cited by: 31
Author(s): Qianjin Zhang, Ruoyun Yu, Songling Fu, Wu ZeMin, Han Y. H. Chen, Hua Liu
Software Mentions: 2
Published: almost 6 years ago
10.7717/peerj.2910
The wild tomato species<i>Solanum chilense</i>shows variation in pathogen resistance between geographically distinct populations
Cited by: 21
Author(s): Remco Stam, Daniela Scheikl, Aurélien Tellier
Software Mentions: 2
Published: almost 8 years ago
10.7717/peerj.8176
Systematic evaluation of the gut microbiome of swamp eel (<i>Monopterus albus</i>) by 16S rRNA gene sequencing
Cited by: 6
Author(s): Xuan Chen, Shouguo Fang, Lili Wei, Qiuyan Zhong
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-019-39284-1
Vegetation-fire feedback reduces projected area burned under climate change
Cited by: 71
Author(s): Matthew D. Hurteau, Shuang Liang, A. L. Westerling, Christine Wiedinmyer
Software Mentions: 2
Published: almost 6 years ago
10.1038/s41598-019-39239-6
Integrated single-base resolution maps of transcriptome, sRNAome and methylome of Tomato yellow leaf curl virus (TYLCV) in tomato
Cited by: 22
Author(s): Álvaro Piedra-Aguilera, Chen Jiao, Ana P. Luna, Francisco Villanueva, Marc Dabad, Anna Esteve‐Codina, Juan Antonio Díaz-Pendón, Zhangjun Fei, Eduardo R. Bejarano, Araceli G. Castillo
Software Mentions: 2
Published: almost 6 years ago
10.1186/s12874-019-0660-9
The triple variable index combines information generated over time from common monitoring variables to identify patients expressing distinct patterns of intraoperative physiology
Cited by: 0
Author(s): Michael P. Schnetz, Harry Hochheiser, David Danks, Douglas Landsittel, Keith M. Vogt, James W. Ibinson, S Whitehurst, Sean McDermott, Melissa Giraldo Duque, A. Murat Kaynar
Software Mentions: 2
Published: almost 6 years ago
10.1038/s41598-019-40766-5
Effects of species traits and environmental predictors on performance and transferability of ecological niche models
Cited by: 59
Author(s): Adrián Regos, Laura Gagne, Domingo Alcaraz‐Segura, João P. Honrado, Jesús Domínguez
Software Mentions: 2
Published: over 5 years ago
10.1038/s41598-019-38654-z
Imaging object-scene relations processing in visible and invisible natural scenes
Cited by: 22
Author(s): Nathan Faivre, Julien Dubois, Naama Schwartz, Liad Mudrik
Software Mentions: 2
Published: over 5 years ago
10.1038/s41598-019-41160-x
Endophytic Bacterial Communities Associated with Roots and Leaves of Plants Growing in Chilean Extreme Environments
Cited by: 57
Author(s): Qian Zhang, Jacquelinne J. Acuña, Nitza G. Inostroza, Marı́a de la Luz Mora, Sergio Radic, Michael J. Sadowsky, Milko A. Jorquera
Software Mentions: 2
Published: over 5 years ago
10.1038/s41598-019-41551-0
A genome-wide association study on photic sneeze reflex in the Chinese population
Cited by: 4
Author(s): Mengqiao Wang, Xinghan Sun, Yang Shi, Xiaojun Song, Hao Mi
Software Mentions: 2
Published: over 5 years ago
10.1007/s00572-020-01014-1
Relative qPCR to quantify colonization of plant roots by arbuscular mycorrhizal fungi
Cited by: 14
Author(s): Natacha Bodenhausen, Gabriel Deslandes‐Hérold, Jan Waelchli, Alain Held, Marcel G. A. van der Heijden, Klaus Schlaeppi
Software Mentions: 2
Published: almost 4 years ago
10.1038/s41598-019-41582-7
Highly Mutable Linker Regions Regulate HIV-1 Rev Function and Stability
Cited by: 12
Author(s): Bhargavi Jayaraman, Jason D Fernandes, Sen Yang, Cynthia L. Smith, Alan D. Frankel
Software Mentions: 2
Published: over 5 years ago
10.1038/s41598-019-42222-w
Gut resistome plasticity in pediatric patients undergoing hematopoietic stem cell transplantation
Cited by: 16
Author(s): Federica D’Amico, Matteo Soverini, Daniele Zama, Clarissa Consolandi, Marco Severgnini, Arcangelo Prete, Andrea Pession, Monica Barone, Silvia Turroni, Elena Biagi, Patrizia Brigidi, Riccardo Masetti, Simone Rampelli, Marco Candela
Software Mentions: 2
Published: over 5 years ago
10.18632/oncotarget.25327
Outcomes of neoadjuvant and adjuvant chemotherapy in stage 2 and 3 non-small cell lung cancer: an analysis of the National Cancer Database
Cited by: 21
Author(s): Matthew T. MacLean, Xin Luo, Shidan Wang, Kemp H. Kernstine, David E. Gerber, Yang Xie
Software Mentions: 2
Published: over 6 years ago
10.1186/s12916-021-01916-7
Implications of the ACC/AHA risk score for prediction of heart failure: the Rotterdam Study
Cited by: 6
Author(s): Banafsheh Arshi, J Berge, Bart van Dijk, Jaap W. Deckers, M. Arfan Ikram, Maryam Kavousi
Software Mentions: 2
Published: almost 4 years ago
10.1038/s41598-019-42637-5
Data-driven discovery of a novel sepsis pre-shock state predicts impending septic shock in the ICU
Cited by: 53
Author(s): Ran Liu, Joseph L. Greenstein, Stephen J. Granite, James C. Fackler, Melania M. Bembea, Sridevi V. Sarma, Raimond L. Winslow
Software Mentions: 2
Published: over 5 years ago
10.1186/s12874-019-0829-2
BUGSnet: an R package to facilitate the conduct and reporting of Bayesian network Meta-analyses
Cited by: 115
Author(s): Audrey Béliveau, Devon J. Boyne, Justin Slater, Darren R. Brenner, Paul Arora
Software Mentions: 2
Published: about 5 years ago
10.1038/s41598-019-43230-6
HDAC Regulates Transcription at the Outset of Axolotl Tail Regeneration
Cited by: 17
Author(s): S. Randal Voss, Larissa V. Ponomareva, Varun B. Dwaraka, Kaitlin E. Pardue, Nour W. Al Haj Baddar, Angela Rodgers, M. Ryan Woodcock, Qingchao Qiu, Anne Crowner, Dana Blichmann, Shivam Khatri, Jon S. Thorson
Software Mentions: 2
Published: over 5 years ago
10.1038/s41598-019-43521-y
Assessing local chlamydia screening performance by combining survey and administrative data to account for differences in local population characteristics
Cited by: 0
Author(s): Nathan Green, Ellie Sherrard-Smith, Clare Tanton, Pam Sonnenberg, Catherine H Mercer, Peter J White
Software Mentions: 2
Published: over 5 years ago
10.1016/j.omtn.2020.10.043
Endometrial cell-derived small extracellular vesicle miR-100-5p promotes functions of trophoblast during embryo implantation
Cited by: 26
Author(s): Qiang Tan, Shuang Shi, Jingjie Liang, Dingren Cao, Shaoyu Wang, Zhengguang Wang
Software Mentions: 2
Published: almost 4 years ago
10.1038/s41598-019-43557-0
Characterization and health risk assessment of PM2.5-bound polycyclic aromatic hydrocarbons in 5 urban cities of Zhejiang Province, China
Cited by: 31
Author(s): Zhe Mo, Zhifang Wang, Guangming Mao, Xuejiao Pan, Lizhi Wu, Pingwei Xu, Shuchang Chen, Aihong Wang, Yongli Zhang, Jinbin Luo, Xialiang Ye, Xiaofeng Wang, Zhijian Chen, Xiaoming Lou
Software Mentions: 2
Published: over 5 years ago
10.1016/j.omtm.2020.04.017
Novel Non-integrating DNA Nano-S/MAR Vectors Restore Gene Function in Isogenic Patient-Derived Pancreatic Tumor Models
Cited by: 15
Author(s): Matthias Bozza, Edward W. Green, Elisa Espinet, Alice De Roia, Corinna Klein, Vanessa Vogel, Rienk Offringa, James A. Williams, Martin R. Sprick, Richard P. Harbottle
Software Mentions: 2
Published: over 4 years ago
10.1016/j.omtm.2018.06.006
Prevalence of Pre-existing Antibodies to CRISPR-Associated Nuclease Cas9 in the USA Population
Cited by: 168
Author(s): Vijaya L. Simhadri, Joseph R. McGill, Shane McMahon, Junxia Wang, Haiyan Jiang, Zuben E. Sauna
Software Mentions: 2
Published: over 6 years ago
10.15252/msb.20177548
Pervasive coexpression of spatially proximal genes is buffered at the protein level
Cited by: 78
Author(s): Georg Kustatscher, Piotr Grabowski, Juri Rappsilber
Software Mentions: 2
Published: over 7 years ago
10.18632/oncotarget.27294
Molecular profiling of radical prostatectomy tissue from patients with no sign of progression identifies<i>ERG</i>as the strongest independent predictor of recurrence
Cited by: 11
Author(s): Wusheng Yan, Muhammad Jamal, Shyh‐Han Tan, Yingjie Song, Denise Young, Yongmei Chen, Shilpa Katta, Kai Ying, Lakshmi Ravindranath, Tarah Woodle, Indu Kohaar, Jennifer Cullen, Jacob Kagan, Sudhir Srivastava, Albert Dobi, David G. McLeod, Inger L. Rosner, Isabell A. Sesterhenn, Alagarsamy Srinivasan, Shiv Srivastava, György Petrovics
Software Mentions: 2
Published: about 5 years ago
10.15252/msb.20145497
Deciphering preferential interactions within supramolecular protein complexes: the proteasome case
Cited by: 66
Author(s): Bertrand Fabre, Thomas Lambour, Luc Garrigues, François Amalríc, Nathalie Vigneron, Thomas Menneteau, Alexandre Stella, Bernard Monsarrat, Benoı̂t Van den Eynde, Odile Burlet‐Schiltz, Marie‐Pierre Bousquet
Software Mentions: 2
Published: almost 10 years ago
10.1038/s41598-019-44350-9
RETRACTED ARTICLE: The Adipocyte Na/K-ATPase Oxidant Amplification Loop is the Central Regulator of Western Diet-Induced Obesity and Associated Comorbidities
Cited by: 17
Author(s): Rebecca Pratt, Cameron Brickman, Athar Nawab, Cameron L. Cottrill, Brian Snoad, Hari Vishal Lakhani, Austin Jelcick, Brandon J. Henderson, Niharika Bhardwaj, Juan Sanabria, Jiang Liu, Zijian Xie, Nader G. Abraham, Joseph I. Shapiro, Komal Sodhi
Software Mentions: 2
Published: over 5 years ago
10.15252/msb.20209810
Identifying modules of cooperating cancer drivers
Cited by: 9
Author(s): Michael Klein, Vincent L. Cannataro, Jeffrey P. Townsend, Scott Newman, David F. Stern, Hongyu Zhao
Software Mentions: 2
Published: almost 4 years ago
10.1038/s41598-019-44854-4
Differential Expression Profile of NLRs and AIM2 in Glioma and Implications for NLRP12 in Glioblastoma
Cited by: 25
Author(s): Nidhi Sharma, Shivanjali Saxena, Ishan Agrawal, Sneha Singh, Varsha Srinivasan, Sharma Arvind, Sridhar Epari, Sushmita Paul, Sushmita Jha
Software Mentions: 2
Published: over 5 years ago
10.1038/s41380-019-0583-1
Long-read sequencing reveals the complex splicing profile of the psychiatric risk gene CACNA1C in human brain
Cited by: 88
Author(s): Michael B. Clark, Tomasz Wrzesiński, Aintzane B. Garcia, Nicola A. L. Hall, Joel E. Kleinman, Thomas M. Hyde, Weinberger, Paul J. Harrison, Wilfried Haerty, Elizabeth M. Tunbridge
Software Mentions: 2
Published: about 5 years ago
10.1038/s41598-020-73706-9
MicroRNA dynamics during hibernation of the Australian central bearded dragon (Pogona vitticeps)
Cited by: 3
Author(s): Alexander Capraro, Denis O’Meally, Shafagh A. Waters, Hardip R. Patel, Arthur Georges, Paul D. Waters
Software Mentions: 2
Published: about 4 years ago
10.1038/s41380-020-0676-x
Glial cell diversity and methamphetamine-induced neuroinflammation in human cerebral organoids
Cited by: 54
Author(s): Jason Dang, Shashi Kant Tiwari, Kriti Agrawal, Hui Hui, Yue Qin, Tariq M. Rana
Software Mentions: 2
Published: almost 5 years ago
10.1111/mpp.13055
Three LysM effectors of <i>Zymoseptoria tritici</i> collectively disarm chitin‐triggered plant immunity
Cited by: 24
Author(s): Hui Tian, Craig Mackenzie, Luis Rodríguez‐Moreno, Grardy C. M. van den Berg, Hongxin Chen, J. J. Rudd, J.R. Mesters, Bart P.H.J. Thomma
Software Mentions: 2
Published: over 3 years ago
10.1038/s41598-020-75591-8
Variation of rhizosphere bacterial community diversity in the desert ephemeral plant Ferula sinkiangensis across environmental gradients
Cited by: 3
Author(s): Tao Zhang, Zhongke Wang, Xinhua Lv, Hanli Dang, Zhuang Li
Software Mentions: 2
Published: about 4 years ago
10.1038/s41598-020-75437-3
The Fuchs corneal dystrophy-associated CTG repeat expansion in the TCF4 gene affects transcription from its alternative promoters
Cited by: 9
Author(s): Alex Sirp, K. Costa Morais Leite, Jürgen Tuvikene, Kaja Nurm, Mari Sepp, Tõnis Timmusk
Software Mentions: 2
Published: about 4 years ago
10.1038/s41598-020-75759-2
Proteomics reveals the preliminary physiological states of the spotted seal (Phoca largha) pups
Cited by: 5
Author(s): Jing Tian, Jing Du, Jingfeng Han, Xiangbo Bao, Xinran Song, Zengkui Lu
Software Mentions: 2
Published: about 4 years ago
10.1038/s41598-020-75990-x
Plasmopara viticola infection affects mineral elements allocation and distribution in Vitis vinifera leaves
Cited by: 17
Author(s): Stefano Cesco, Anna Tolotti, Stefano Nadalini, Stefano Rizzi, Fabio Valentinuzzi, Tanja Mimmo, Carlo Porfido, Ignazio Allegretta, O. Giovannini, Michele Perazzolli, G. Cipriáni, Roberto Terzano, I. Pertot, Youry Pii
Software Mentions: 2
Published: about 4 years ago
10.1038/s41598-020-76085-3
Phenotype prediction and characterization of 25 pharmacogenes in Thais from whole genome sequencing for clinical implementation
Cited by: 11
Author(s): John Mauleekoonphairoj, Montri Chamnanphon, Apichai Khongphatthanayothin, Boosamas Sutjaporn, Pharawee Wandee, Yong Poovorawan, Koonlawee Nademanee, Monnat Pongpanich, Pajaree Chariyavilaskul
Software Mentions: 2
Published: about 4 years ago
10.1038/s41598-020-76019-z
On the correlation between material-induced cell shape and phenotypical response of human mesenchymal stem cells
Cited by: 16
Author(s): Aliaksei Vasilevich, Steven Vermeulen, Marloes M. J. Kamphuis, Nadia Roumans, Said Eroumé, Dennie G. A. J. Hebels, Jeroen van de Peppel, Rika Reihs, Nick R. M. Beijer, Aurélie Carlier, Anne E. Carpenter, Shantanu Singh, Jan de Boer
Software Mentions: 2
Published: about 4 years ago
10.1186/s12967-021-02814-5
Gut microbiota accelerates cisplatin-induced acute liver injury associated with robust inflammation and oxidative stress in mice
Cited by: 31
Author(s): Shenhai Gong, Ying Feng, Yunong Zeng, Huanrui Zhang, Meiping Pan, Fangjie He, Rong Wu, Jingrui Chen, Jiuling Lu, Siyou Zhang, Songhua Yuan, Xia Chen
Software Mentions: 2
Published: over 3 years ago
10.1002/1878-0261.13035
Sex disparity in acute myeloid leukaemia with <i>FLT3</i> internal tandem duplication mutations: implications for prognosis
Cited by: 10
Author(s): Monica Hellesøy, Caroline Engen, Tim Grob, Bob Löwenberg, Peter J.M. Valk, Bjørn Tore Gjertsen
Software Mentions: 2
Published: over 3 years ago
10.1038/s41598-020-76822-8
Grazing pressure-induced shift in planktonic bacterial communities with the dominance of acIII-A1 actinobacterial lineage in soda pans
Cited by: 11
Author(s): Attila Szabó, Kristóf Korponai, Boglárka Somogyi, Balázs Vajna, Lajos Vörös, Zsófia Horváth, Emil Boros, Nóra Szabó-Tugyi, Károly Màrialigeti, Tamás Felföldi
Software Mentions: 2
Published: about 4 years ago
10.1038/s41598-020-75352-7
Machine learning to predict early TNF inhibitor users in patients with ankylosing spondylitis
Cited by: 6
Author(s): Seulkee Lee, Young‐Gyu Eun, Hyungjin Kim, Hoon‐Suk Cha, Eun‐Mi Koh, Jaejoon Lee
Software Mentions: 2
Published: about 4 years ago
10.1186/s10020-021-00331-1
Liquid biopsy as an option for predictive testing and prognosis in patients with lung cancer
Cited by: 8
Author(s): Alvida Qvick, Bianca Stenmark, Jessica Carlsson, Johan Isaksson, Christina Karlsson, Gisela Helenius
Software Mentions: 2
Published: over 3 years ago
10.1002/mgg3.1659
Stepwise shortening of agalsidase beta infusion duration in Fabry disease: Clinical experience with infusion rate escalation protocol
Cited by: 2
Author(s): Eleonora Riccio, Mario Zanfardino, Monica Franzese, Ivana Capuano, Pasquale Buonanno, Lucia Ferreri, Maria Amicone, Antonio Pisani
Software Mentions: 2
Published: over 3 years ago
10.1038/s41598-020-77179-8
Planktonic foraminifera eDNA signature deposited on the seafloor remains preserved after burial in marine sediments
Cited by: 15
Author(s): Inès Barrenechea Angeles, Franck Lejzerowicz, Tristan Cordier, Janin Scheplitz, Michal Kučera, Daniel Ariztegui, Jan Pawłowski, Raphaël Morard
Software Mentions: 2
Published: about 4 years ago
10.1038/s41598-020-76873-x
Deeper waters are changing less consistently than surface waters in a global analysis of 102 lakes
Cited by: 51
Author(s): Rachel M. Pilla, Craig E. Williamson, Б. В. Адамович, Rita Adrian, Orlane Anneville, Sudeep Chandra, William Colom-Montero, Shawn P. Devlin, Margaret Dix, Martin T. Dokulil, Evelyn E. Gaiser, Scott F. Girdner, K. David Hambright, David P. Hamilton, Karl E. Havens, Dag O. Hessen, Scott N. Higgins, Timo Huttula, Hannu Huuskonen, Peter D. F. Isles, Klaus Joehnk, Ian D. Jones, Wendel Keller, Lesley B. Knoll, Johanna Korhonen, Benjamin M. Kraemer, Peter R. Leavitt, Fabio Lepori, Martin Luger, Stephen C. Maberly, John M. Mélack, Stephanie J. Melles, Dörthe C. Müller-Navarra, Don Pierson, Helen V. Pislegina, Pierre Denis Plisnier, David C. Richardson, Alon Rimmer, Michela Rogora, James A. Rusak, Steven Sadro, Nico Salmaso, Jasmine E. Saros, Émilie Saulnier‐Talbot, Daniel E. Schindler, Martin Schmid, Svetlana V. Shimaraeva, Eugene A. Silow, Lewis Sitoki, Rubén Sommaruga, Dietmar Straile, Kristin E. Strock, Wim Thiery, Maxim A. Timofeyev, Piet Verburg, Rolf D. Vinebrooke, Gesa A. Weyhenmeyer, Egor Zadereev
Software Mentions: 2
Published: about 4 years ago
10.3390/molecules25194413
Computational Study of C-X-C Chemokine Receptor (CXCR)3 Binding with Its Natural Agonists Chemokine (C-X-C Motif) Ligand (CXCL)9, 10 and 11 and with Synthetic Antagonists: Insights of Receptor Activation towards Drug Design for Vitiligo
Cited by: 6
Author(s): Giovanny Aguilera-Durán, Antonio Romo-Mancillas
Software Mentions: 2
Published: about 4 years ago
10.1038/s41598-020-77835-z
Specific capture and whole-genome phylogeography of Dolphin morbillivirus
Cited by: 8
Author(s): Francesco Cerutti, Federica Giorda, Carla Grattarola, Walter Mignone, Chiara Beltramo, Nicolas Keck, Alessio Lorusso, Di Francesco G, Ludovica Di Renzo, Giovanni Di Guardo, Maria Goria, Loretta Masoero, Pier Luigi Acutis, Cristina Casalone, Simone Peletto
Software Mentions: 2
Published: about 4 years ago
10.1038/s41598-020-77564-3
IL-10 based immunomodulation initiated at birth extends lifespan in a familial mouse model of amyotrophic lateral sclerosis
Cited by: 4
Author(s): Michael R. Strickland, Kristen R. Ibanez, Mariya Yaroshenko, Carolina Ceballos Diaz, David R. Borchelt, Paramita Chakrabarty
Software Mentions: 2
Published: about 4 years ago
10.1038/s41598-020-78314-1
Sustained organic loading disturbance favors nitrite accumulation in bioreactors with variable resistance, recovery and resilience of nitrification and nitrifiers
Cited by: 9
Author(s): Ezequiel Santillan, W. X. Phua, Florentin Constancias, Stefan Wuertz
Software Mentions: 2
Published: almost 4 years ago
10.1186/s13018-021-02574-4
Identification and validation of key long non-coding RNAs in resveratrol protect against IL-1β-treated chondrocytes via integrated bioinformatic analysis
Cited by: 5
Author(s): Hong Yi, Wei Zhang, Shengyu Cui, Jiyang Fan, Xiao Feng Zhu, Wei Liu
Software Mentions: 2
Published: over 3 years ago
10.3390/molecules26040815
Comparison of Three Accelerated Oxidation Tests Applied to Red Wines with Different Chemical Composition
Cited by: 6
Author(s): Francesca Coppola, Luigi Picariello, Martino Forino, Luigi Moio
Software Mentions: 2
Published: almost 4 years ago
10.1038/s41598-020-79773-2
Environmental patterns of brown moss- and Sphagnum-associated microbial communities
Cited by: 8
Author(s): Alexander Tøsdal Tveit, Andrea Kiss, Matthias Winkel, Fabian Horn, Tomáš Hájek, Mette M. Svenning, Dirk Wagner, Susanne Liebner
Software Mentions: 2
Published: almost 4 years ago
10.1038/s41598-020-79868-w
Unique behavioural modifications in the web structure of the cave orb spider Meta menardi (Araneae, Tetragnathidae)
Cited by: 5
Author(s): Daniel Simonsen, Thomas Hesselberg
Software Mentions: 2
Published: almost 4 years ago
10.3390/molecules26113172
Modification of Sensory Expression of 3-Isobutyl-2-methoxypyrazine in Wines through Blending Technique
Cited by: 6
Author(s): Mengqi Ling, Yu Zhou, Yi-Bin Lan, Chi Cheng, Guangfeng Wu, Chang‐Qing Duan, Ying Shi
Software Mentions: 2
Published: over 3 years ago
10.1038/s41598-020-79438-0
Incorporating human mobility data improves forecasts of Dengue fever in Thailand
Cited by: 29
Author(s): Mathew V. Kiang, Mauricio Santillana, Jarvis T. Chen, Jukka‐Pekka Onnela, Nancy Krieger, Kenth Engø‐Monsen, Nattwut Ekapirat, Darin Areechokchai, Preecha Prempree, Richard J. Maude, Caroline O. Buckee
Software Mentions: 2
Published: almost 4 years ago
10.1038/s41598-020-79831-9
Multi-pronged approach to human mesenchymal stromal cells senescence quantification with a focus on label-free methods
Cited by: 11
Author(s): Weichao Zhai, Jerome Zu Yao Tan, Tobias Russell, Sixun Chen, Dennis McGonagle, May Win Naing, Derrick Yong, Elena Jones
Software Mentions: 2
Published: almost 4 years ago
10.3390/molecules24213837
Metabolomic Approach for Discrimination of Cultivation Age and Ripening Stage in Ginseng Berry Using Gas Chromatography-Mass Spectrometry
Cited by: 11
Author(s): Seong-Eun Park, Seung-Ho Seo, Eunju Kim, Dae-Hun Park, Kyung-Mok Park, Seung‐Sik Cho, Hong-Seok Son
Software Mentions: 2
Published: about 5 years ago
10.1038/s41598-021-81257-w
Analysis of global human gut metagenomes shows that metabolic resilience potential for short-chain fatty acid production is strongly influenced by lifestyle
Cited by: 10
Author(s): David P. Jacobson, Tanvi P. Honap, Andrew T. Ozga, Nicolas Méda, Thérèse Kagoné, Hélène Carabin, Paul Spicer, Raúl Y. Tito, Alexandra J. Obregón-Tito, Luis Marín Reyes, Luzmila Troncoso-Corzo, Emilio Guija-Poma, Krithivasan Sankaranarayanan, Cecil M. Lewis
Software Mentions: 2
Published: almost 4 years ago
10.3390/molecules26113341
The Stool Volatile Metabolome of Pre-Term Babies
Cited by: 4
Author(s): Alessandra Frau, Lauren Lett, Rachael Slater, Gregory R. Young, Christopher J. Stewart, Janet Berrington, David Hughes, Nicholas D. Embleton, Chris Probert
Software Mentions: 2
Published: over 3 years ago
10.1038/s41598-021-82287-0
Multiplexed CRISPR-Cas9 system in a single adeno-associated virus to simultaneously knock out redundant clock genes
Cited by: 5
Author(s): Boil Kim, Jihoon Kim, Minjeong Chun, Inah Park, Damhyeon Kwak, Mijung Choi, Kyungjin Kim, Han Kyoung Choe
Software Mentions: 2
Published: almost 4 years ago
10.1111/1755-0998.13186
Rapid and accurate species identification for ecological studies and monitoring using CRISPR‐based SHERLOCK
Cited by: 26
Author(s): Melinda R. Baerwald, Alisha Goodbla, Raman P. Nagarajan, Jonathan S. Gootenberg, Omar O. Abudayyeh, Feng Zhang, Andrea Schreier
Software Mentions: 2
Published: over 4 years ago
10.1038/s41598-021-94744-x
Description of larval morphology and phylogenetic relationships of Heterotemna tenuicornis (Silphidae)
Cited by: 4
Author(s): Karolina Mahlerová, Pavel Jakubec, Martin Novák, Jan Růžička
Software Mentions: 2
Published: over 3 years ago
10.1111/mec.15090
Dietary partitioning promotes the coexistence of planktivorous species on coral reefs
Cited by: 27
Author(s): Matthieu Leray, Alice L. Alldredge, Jen‐Hao Yang, Christopher P. Meyer, Sally J. Holbrook, Russell J. Schmitt, Nancy­ Knowlton­, Andrew J. Brooks
Software Mentions: 2
Published: over 5 years ago
10.1038/s41598-021-96974-5
Comparative analysis of therapeutic effects between medium cut-off and high flux dialyzers using metabolomics and proteomics: exploratory, prospective study in hemodialysis
Cited by: 4
Author(s): Hyo Jin Kim, Eun Young Seong, Wonho Lee, Suhkmann Kim, Hee-Sung Ahn, Jeonghun Yeom, Kyunggon Kim, Chae Hwa Kwon, Sang Heon Song
Software Mentions: 2
Published: over 3 years ago
10.1038/s41598-021-95892-w
Herbaceous perennial ornamental plants can support complex pollinator communities
Cited by: 13
Author(s): Emily Erickson, Harland M. Patch, Christina M. Grozinger
Software Mentions: 2
Published: over 3 years ago
10.1038/s41598-021-97267-7
Dynamics of SARS-CoV-2 mutations reveals regional-specificity and similar trends of N501 and high-frequency mutation N501Y in different levels of control measures
Cited by: 12
Author(s): Santiago Justo Arévalo, Daniela Zapata Sifuentes, César J. Huallpa, Gianfranco Landa Bianchi, Adriana Castillo Chávez, Romina Garavito-Salini Casas, Carmen Sofia Uribe Calampa, Guillermo Uceda-Campos, Roberto Pineda
Software Mentions: 2
Published: about 3 years ago
10.1038/s41598-021-95875-x
Hypersensitivity in teeth affected by molar-incisor hypomineralization (MIH)
Cited by: 13
Author(s): Thomas Linner, Yeganeh Khazaei, Katharina Bücher, Jan Pfisterer, Reinhard Hickel, Jan Kühnisch
Software Mentions: 2
Published: about 3 years ago
10.1186/2049-2618-2-19
Choice of bacterial DNA extraction method from fecal material influences community structure as evaluated by metagenomic analysis
Cited by: 204
Author(s): Agata Wesolowska-Andersen, Martin Iain Bahl, Vera Carvalho, Karsten Kristiansen, Thomas Sicheritz-Pontén, Ramneek Gupta, Tine Rask Licht
Software Mentions: 2
Published: over 10 years ago
10.1186/s40168-021-01038-5
Urban wastewater bacterial communities assemble into seasonal steady states
Cited by: 27
Author(s): Emily Lou LaMartina, Aurash Mohaimani, Ryan J. Newton
Software Mentions: 2
Published: over 3 years ago
10.1038/s41598-021-98628-y
The small-world network of global protests
Cited by: 5
Author(s): Leonardo N. Ferreira, Inho Hong, Alex Rutherford, Manuel Cebrián
Software Mentions: 2
Published: about 3 years ago
10.1038/s41598-021-98958-x
Effectiveness of human-origin Lactobacillus plantarum PL-02 in improving muscle mass, exercise performance and anti-fatigue
Cited by: 20
Author(s): Mon-Chien Lee, Yi-Ju Hsu, Hao-Chung Ho, Yi‐Wei Kuo, Wen‐Yang Lin, Shin-Yu Tsai, Weiling Chen, Che-Li Lin, Chi‐Chang Huang
Software Mentions: 2
Published: about 3 years ago
10.1038/s41598-021-98934-5
Genomic background selection to reduce the mutation load after random mutagenesis
Cited by: 8
Author(s): Nirosha L. Karunarathna, Dilan S. R. Patiranage, Hans‐Joachim Harloff, Niharika Sashidhar, Christian Jung
Software Mentions: 2
Published: about 3 years ago
10.1186/s40168-020-00885-y
Catabolism and interactions of uncultured organisms shaped by eco-thermodynamics in methanogenic bioprocesses
Cited by: 40
Author(s): Masaru K. Nobu, Takashi Narihiro, Renwei Mei, Yoichi Kamagata, Patrick K. H. Lee, Po‐Heng Lee, Michael J. McInerney, Wen Tso Liu
Software Mentions: 2
Published: over 4 years ago
10.1111/jpy.12919
Generalist Life Cycle Aids Persistence of <i>Alexandrium ostenfeldii</i> (Dinophyceae) in Seasonal Coastal Habitats of the Baltic Sea
Cited by: 5
Author(s): Jacqueline Jerney, Salla Ahonen, Päivi Hakanen, Sanna Suikkanen, Anke Kremp
Software Mentions: 2
Published: about 5 years ago
10.1186/s12920-016-0172-y
Saliva DNA quality and genotyping efficiency in a predominantly elderly population
Cited by: 23
Author(s): Harini V. Gudiseva, Mark Hansen, Linda S. Gutierrez, David W. Collins, Jie He, Lana D. Verkuil, Ian Danford, Anna Sagaser, Anita S. Bowman, Rebecca Salowe, Prithvi S. Sankar, Eydie Miller-Ellis, Amanda Lehman, Joan M. O’Brien
Software Mentions: 2
Published: over 8 years ago
10.1186/1755-8794-8-S2-S5
Relating hepatocellular carcinoma tumor samples and cell lines using gene expression data in translational research
Cited by: 56
Author(s): Bin Chen, Marina Sirota, Hua Fan-Minogue, Dexter Hadley, Atul J. Butte
Software Mentions: 2
Published: over 9 years ago
10.1038/s41598-021-99192-1
Characterizing the genomic variation and population dynamics of Plasmodium falciparum malaria parasites in and around Lake Victoria, Kenya
Cited by: 10
Author(s): Ashley Osborne, Emilia Mańko, Mika Takeda, Akira Kaneko, Wataru Kagaya, Chim W. Chan, Mtakai Ngara, James Kongere, Kiyoshi Kita, Susana Campino, O. Kaneko, Jesse Gitaka, Taane G. Clark
Software Mentions: 2
Published: about 3 years ago
10.1038/s41598-021-99445-z
Intention-based and sensory-based predictions
Cited by: 7
Author(s): Álvaro Darriba, Yi Fang Hsu, Sandrien van Ommen, Florian Waszak
Software Mentions: 2
Published: about 3 years ago
10.1186/s12920-020-00834-6
Identification of LINC02310 as an enhancer in lung adenocarcinoma and investigation of its regulatory network via comprehensive analyses
Cited by: 4
Author(s): Wenyuan Zhao, Jun Wang, Qingxi Luo, Wei Peng, Bin Li, Lei Wang, Chunfang Zhang, Chaojun Duan
Software Mentions: 2
Published: almost 4 years ago
10.1038/s41598-021-98976-9
Coral micro- and macro-morphological skeletal properties in response to life-long acclimatization at CO2 vents in Papua New Guinea
Cited by: 6
Author(s): Fiorella Prada, Leonardo Brizi, Silvia Franzellitti, Stefano Mengoli, Simona Fermani, Iryna Polishchuk, Nicola Baraldi, Francesco Ricci, Quinzia Palazzo, Erik Caroselli, Boaz Pokroy, Loris Giorgini, Zvy Dubinsky, Paola Fantazzini, Giuseppe Falini, Stefano Goffredo, Katharina Fabricius
Software Mentions: 2
Published: about 3 years ago
10.1186/s40168-019-0683-9
Alterations in the gut microbiome and metabolism with coronary artery disease severity
Cited by: 179
Author(s): Honghong Liu, Xi Chen, Xiaomin Hu, Haitao Niu, Ran Tian, Hui Wang, Haiyu Pang, Lingjuan Jiang, Bin Qiu, Xiuting Chen, Yang Zhang, Yinglong Ma, Si Tang, Hanyu Li, Siqin Feng, Shuyang Zhang, Chenhong Zhang
Software Mentions: 2
Published: over 5 years ago
10.1186/s12879-015-1063-0
Analysis of cerebrospinal fluid protein concentrations of patients with cryptococcal meningitis treated with antifungal agents
Cited by: 6
Author(s): Lien‐Hung Huang, Hui Yang, Junyan Qu, Yanbin Liu, Chengliang Zhong, Guangmin Tang, Ying Liu, Yao Huang, Xiaoju Lv
Software Mentions: 2
Published: over 9 years ago
10.1155/2019/1252653
Current Status of Pearl Millet Downy Mildew Prevalence across Agroecological Zones of Senegal
Cited by: 1
Author(s): Yedomon Ange Bovys Zoclanclounon, Ghislain Kanfany, Aboubacry Kane, Daniel Foncéka, Georgina Lala Ehemba, Fatmata Ly
Software Mentions: 2
Published: over 5 years ago
10.3390/s19102388
Data Stream Mining Applied to Maximum Wind Forecasting in the Canary Islands
Cited by: 7
Author(s): Javier J. Sánchez-Medina, Juan Guerra-Montenegro, David Sánchez-Rodríguez, Itziar Alonso-González, Juan L. Navarro-Mesa
Software Mentions: 2
Published: over 5 years ago
10.1186/s40168-018-0493-5
The developing premature infant gut microbiome is a major factor shaping the microbiome of neonatal intensive care unit rooms
Cited by: 60
Author(s): Brandon Brooks, Matthew R. Olm, Brian Firek, Robyn Baker, David Geller-McGrath, Sophia R. Reimer, Karina Ruth Soenjoyo, Jennifer S. Yip, Dylan Dahan, Brian C. Thomas, Michael J. Morowitz, Jillian F. Banfield
Software Mentions: 2
Published: over 6 years ago
10.1093/ofid/ofy305
Risk Factors for Septicemia Deaths and Disparities in a Longitudinal US Cohort
Cited by: 16
Author(s): Jordan A. Kempker, Michael R. Kramer, Lance A. Waller, Greg S. Martin
Software Mentions: 2
Published: about 6 years ago
10.3390/s21082672
Comparison of Self-Reported and Device-Based Measured Physical Activity Using Measures of Stability, Reliability, and Validity in Adults and Children
Cited by: 16
Author(s): Janis Fiedler, Tobias Eckert, Alexander Burchartz, Alexander Wöll, Kathrin Wunsch
Software Mentions: 2
Published: over 3 years ago
10.3390/s21134492
Internal Consistency of Sway Measures via Embedded Head-Mounted Accelerometers: Implications for Neuromotor Investigations
Cited by: 0
Author(s): Andrew P. Lapointe, Jessica N. Ritchie, Rachel V. Vitali, Joel S Burma, Ateyeh Soroush, Ibukunoluwa K. Oni, J. Lawrence Dunn
Software Mentions: 2
Published: over 3 years ago
10.3390/s21186319
A New Approach to Predicting Cryptocurrency Returns Based on the Gold Prices with Support Vector Machines during the COVID-19 Pandemic Using Sensor-Related Data
Cited by: 22
Author(s): Esam Mahdi, Víctor Leiva, Saed Mara'Beh, Carlos Martín-Barreiro
Software Mentions: 2
Published: about 3 years ago
10.1038/s41392-021-00688-z
Spontaneous apoptosis of cells in therapeutic stem cell preparation exert immunomodulatory effects through release of phosphatidylserine
Cited by: 17
Author(s): Xuemei He, Weiqi Hong, Jingyun Yang, Lei Hong, Tianqi Lu, He Cai, Zhenfei Bi, Xiangyu Pan, Yu Liu, Lunzhi Dai, Wei Wang, Canhua Huang, Hongxin Deng, Xiawei Wei
Software Mentions: 2
Published: over 3 years ago
10.1186/s40168-018-0441-4
Gut-dependent microbial translocation induces inflammation and cardiovascular events after ST-elevation myocardial infarction
Cited by: 167
Author(s): Xin Zhou, Jing Li, Junli Guo, Bin Geng, Wenjie Ji, Qian Zhao, Jinxin Li, Xinlin Liu, Junxiang Liu, Zhao-Zeng Guo, Wei Cai, Yun Ma, Dong Ren, Jun Miao, Shaobo Chen, Zhuoli Zhang, Junru Chen, Jiuchang Zhong, Wenbin Liu, Ming‐Hui Zou, Yuming Li, Jun Cai
Software Mentions: 2
Published: over 6 years ago
10.1186/s13395-021-00260-x
Dynamics of myogenic differentiation using a novel Myogenin knock-in reporter mouse
Cited by: 9
Author(s): Maria Benavente-Diaz, Glenda Comai, Daniela Di Girolamo, Francina Langa, Shahragim Tajbakhsh
Software Mentions: 2
Published: almost 4 years ago
10.1093/scan/nsab004
Vicarious praise and pain: parental neural responses to social feedback about their adolescent child
Cited by: 7
Author(s): Lisanne A.E.M. van Houtum, Mirjam C M Wever, Loes Janssen, Charlotte C. van Schie, Geert‐Jan Will, Marieke S. Tollenaar, Bernet M. Elzinga
Software Mentions: 2
Published: almost 4 years ago
10.1186/1751-0473-9-23
plot2groups: an R package to plot scatter points for two groups of values
Cited by: 1
Author(s): Yong Xu, Fuquan Zhang, Guoqiang Wang, Hongbao Cao, Cheng Zhang, Yin Yao Shugart
Software Mentions: 2
Published: about 10 years ago